Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096210 | XP_003621746.2 | 97.911 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 0.0 | 773 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096210 | sp|Q5XV40|LAZY1_ARATH | 35.443 | 395 | 205 | 15 | 1 | 382 | 1 | 358 | 3.23e-46 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096210 | G7KUR7 | 97.911 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 0.0 | 773 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029910 | Msa1096210 | 0.802055 | 6.727837e-49 | -8.615850e-47 |
| Msa0032320 | Msa1096210 | 0.822519 | 2.268570e-53 | -8.615850e-47 |
| Msa0050990 | Msa1096210 | 0.803379 | 3.585071e-49 | -8.615850e-47 |
| Msa0110970 | Msa1096210 | 0.807156 | 5.799605e-50 | -8.615850e-47 |
| Msa0116770 | Msa1096210 | 0.801070 | 1.070980e-48 | -8.615850e-47 |
| Msa0626220 | Msa1096210 | 0.816625 | 5.022629e-52 | -8.615850e-47 |
| Msa0626280 | Msa1096210 | 0.818563 | 1.835913e-52 | -8.615850e-47 |
| Msa0641250 | Msa1096210 | 0.808912 | 2.453290e-50 | -8.615850e-47 |
| Msa0669840 | Msa1096210 | 0.813200 | 2.886285e-51 | -8.615850e-47 |
| Msa0688500 | Msa1096210 | 0.825364 | 4.880703e-54 | -8.615850e-47 |
| Msa0737190 | Msa1096210 | 0.819527 | 1.108463e-52 | -8.615850e-47 |
| Msa0739580 | Msa1096210 | 0.821743 | 3.431861e-53 | -8.615850e-47 |
| Msa0740640 | Msa1096210 | 0.801637 | 8.197425e-49 | -8.615850e-47 |
| Msa0782360 | Msa1096210 | 0.845416 | 4.116542e-59 | -8.615850e-47 |
| Msa0156250 | Msa1096210 | 0.827073 | 1.913450e-54 | -8.615850e-47 |
| Msa0197100 | Msa1096210 | 0.834408 | 3.049655e-56 | -8.615850e-47 |
| Msa0212150 | Msa1096210 | 0.886398 | 3.541728e-72 | -8.615850e-47 |
| Msa0213040 | Msa1096210 | 0.824073 | 9.831374e-54 | -8.615850e-47 |
| Msa0218780 | Msa1096210 | 0.809776 | 1.600595e-50 | -8.615850e-47 |
| Msa0219190 | Msa1096210 | 0.816675 | 4.893012e-52 | -8.615850e-47 |
| Msa0221290 | Msa1096210 | 0.831444 | 1.663461e-55 | -8.615850e-47 |
| Msa0385390 | Msa1096210 | 0.815654 | 8.277682e-52 | -8.615850e-47 |
| Msa0406000 | Msa1096210 | 0.806173 | 9.354067e-50 | -8.615850e-47 |
| Msa0424330 | Msa1096210 | 0.803566 | 3.278674e-49 | -8.615850e-47 |
| Msa0451400 | Msa1096210 | 0.832828 | 7.563158e-56 | -8.615850e-47 |
| Msa0999300 | Msa1096210 | 0.824547 | 7.607664e-54 | -8.615850e-47 |
| Msa0999360 | Msa1096210 | 0.814298 | 1.654714e-51 | -8.615850e-47 |
| Msa0999410 | Msa1096210 | 0.808987 | 2.363812e-50 | -8.615850e-47 |
| Msa1001890 | Msa1096210 | 0.800911 | 1.153992e-48 | -8.615850e-47 |
| Msa1010840 | Msa1096210 | 0.944186 | 3.091422e-103 | -8.615850e-47 |
| Msa1034680 | Msa1096210 | 0.804224 | 2.394058e-49 | -8.615850e-47 |
| Msa1037900 | Msa1096210 | 0.822408 | 2.407179e-53 | -8.615850e-47 |
| Msa1037910 | Msa1096210 | 0.837297 | 5.648744e-57 | -8.615850e-47 |
| Msa1052360 | Msa1096210 | 0.957023 | 7.351371e-115 | -8.615850e-47 |
| Msa1070420 | Msa1096210 | 0.825158 | 5.460955e-54 | -8.615850e-47 |
| Msa1077000 | Msa1096210 | 0.821903 | 3.151710e-53 | -8.615850e-47 |
| Msa1096210 | Msa1127140 | 0.807904 | 4.023642e-50 | -8.615850e-47 |
| Msa1096210 | Msa1129960 | 0.814075 | 1.852669e-51 | -8.615850e-47 |
| Msa1096210 | Msa1129970 | 0.849451 | 3.205835e-60 | -8.615850e-47 |
| Msa1096210 | Msa1140640 | 0.898545 | 4.778338e-77 | -8.615850e-47 |
| Msa1096210 | Msa1166400 | 0.808681 | 2.748427e-50 | -8.615850e-47 |
| Msa1096210 | Msa1169990 | 0.803559 | 3.290884e-49 | -8.615850e-47 |
| Msa1096210 | Msa1176160 | 0.805142 | 1.539994e-49 | -8.615850e-47 |
| Msa1096210 | Msa1179280 | 0.810174 | 1.313958e-50 | -8.615850e-47 |
| Msa1096210 | Msa1200420 | 0.821704 | 3.505045e-53 | -8.615850e-47 |
| Msa1096210 | Msa1201110 | 0.840491 | 8.419599e-58 | -8.615850e-47 |
| Msa1096210 | Msa1201160 | 0.823928 | 1.063397e-53 | -8.615850e-47 |
| Msa1096210 | Msa1228190 | 0.806930 | 6.476130e-50 | -8.615850e-47 |
| Msa1096210 | Msa1233560 | 0.841526 | 4.505288e-58 | -8.615850e-47 |
| Msa1096210 | Msa1253450 | 0.832397 | 9.676299e-56 | -8.615850e-47 |
| Msa1096210 | Msa1260610 | 0.805019 | 1.634070e-49 | -8.615850e-47 |
| Msa1096210 | Msa1271260 | 0.802420 | 5.657453e-49 | -8.615850e-47 |
| Msa1096210 | Msa1275820 | 0.803304 | 3.715468e-49 | -8.615850e-47 |
| Msa1096210 | Msa1282500 | 0.807403 | 5.142226e-50 | -8.615850e-47 |
| Msa1096210 | Msa1305510 | 0.816407 | 5.618660e-52 | -8.615850e-47 |
| Msa1096210 | Msa1307190 | 0.803990 | 2.677590e-49 | -8.615850e-47 |
| Msa1096210 | Msa1313970 | 0.825362 | 4.884985e-54 | -8.615850e-47 |
| Msa1096210 | Msa1336780 | 0.801617 | 8.273935e-49 | -8.615850e-47 |
| Msa1096210 | Msa1379970 | 0.825127 | 5.551343e-54 | -8.615850e-47 |
| Msa1096210 | Msa1390690 | 0.804037 | 2.618440e-49 | -8.615850e-47 |
| Msa1096210 | Msa1392900 | 0.800184 | 1.623110e-48 | -8.615850e-47 |
| Msa1096210 | Msa1394890 | 0.814399 | 1.571121e-51 | -8.615850e-47 |
| Msa1096210 | Msa1396780 | 0.805828 | 1.105692e-49 | -8.615850e-47 |
| Msa1096210 | Msa1406780 | 0.820255 | 7.554008e-53 | -8.615850e-47 |
| Msa1096210 | Msa1420060 | 0.803733 | 3.028342e-49 | -8.615850e-47 |
| Msa1096210 | Msa1421550 | 0.815081 | 1.109995e-51 | -8.615850e-47 |
| Msa1096210 | Msa1431850 | 0.828559 | 8.403456e-55 | -8.615850e-47 |
| Msa1096210 | Msa1449940 | 0.801103 | 1.054600e-48 | -8.615850e-47 |
| Msa1096210 | Msa1459530 | 0.801027 | 1.092683e-48 | -8.615850e-47 |
| Msa1096210 | Msa1466590 | 0.802067 | 6.689759e-49 | -8.615850e-47 |
| Msa0239030 | Msa1096210 | 0.852358 | 4.864030e-61 | -8.615850e-47 |
| Msa0239800 | Msa1096210 | 0.803874 | 2.830136e-49 | -8.615850e-47 |
| Msa0252770 | Msa1096210 | 0.858948 | 5.801922e-63 | -8.615850e-47 |
| Msa0253340 | Msa1096210 | 0.815959 | 7.077148e-52 | -8.615850e-47 |
| Msa0276740 | Msa1096210 | 0.847334 | 1.234866e-59 | -8.615850e-47 |
| Msa0289920 | Msa1096210 | 0.879641 | 1.055617e-69 | -8.615850e-47 |
| Msa0292170 | Msa1096210 | 0.829495 | 4.985769e-55 | -8.615850e-47 |
| Msa0298240 | Msa1096210 | 0.848771 | 4.956392e-60 | -8.615850e-47 |
| Msa0306120 | Msa1096210 | 0.841909 | 3.569450e-58 | -8.615850e-47 |
| Msa0316680 | Msa1096210 | 0.845885 | 3.071815e-59 | -8.615850e-47 |
| Msa0317510 | Msa1096210 | 0.805539 | 1.271269e-49 | -8.615850e-47 |
| Msa0329620 | Msa1096210 | 0.848815 | 4.819038e-60 | -8.615850e-47 |
| Msa0336310 | Msa1096210 | 0.806751 | 7.063364e-50 | -8.615850e-47 |
| Msa0359250 | Msa1096210 | 0.812903 | 3.354017e-51 | -8.615850e-47 |
| Msa0362780 | Msa1096210 | 0.806212 | 9.181231e-50 | -8.615850e-47 |
| Msa0491250 | Msa1096210 | 0.808224 | 3.440419e-50 | -8.615850e-47 |
| Msa0492190 | Msa1096210 | 0.805327 | 1.408066e-49 | -8.615850e-47 |
| Msa0506980 | Msa1096210 | 0.811091 | 8.326876e-51 | -8.615850e-47 |
| Msa0534930 | Msa1096210 | 0.801508 | 8.711320e-49 | -8.615850e-47 |
| Msa0535040 | Msa1096210 | 0.808569 | 2.903566e-50 | -8.615850e-47 |
| Msa0537360 | Msa1096210 | 0.834608 | 2.716796e-56 | -8.615850e-47 |
| Msa0537920 | Msa1096210 | 0.801888 | 7.279479e-49 | -8.615850e-47 |
| Msa0538220 | Msa1096210 | 0.818196 | 2.223612e-52 | -8.615850e-47 |
| Msa0591790 | Msa1096210 | 0.838961 | 2.106149e-57 | -8.615850e-47 |
| Msa0594090 | Msa1096210 | 0.838349 | 3.031591e-57 | -8.615850e-47 |
| Msa0849280 | Msa1096210 | 0.843096 | 1.729090e-58 | -8.615850e-47 |
| Msa0851020 | Msa1096210 | 0.837949 | 3.843360e-57 | -8.615850e-47 |
| Msa0856520 | Msa1096210 | 0.814676 | 1.364750e-51 | -8.615850e-47 |
| Msa0860280 | Msa1096210 | 0.849126 | 3.948952e-60 | -8.615850e-47 |
| Msa0867350 | Msa1096210 | 0.816025 | 6.839945e-52 | -8.615850e-47 |
| Msa0880650 | Msa1096210 | 0.803829 | 2.891458e-49 | -8.615850e-47 |
| Msa0895790 | Msa1096210 | 0.833037 | 6.710490e-56 | -8.615850e-47 |
| Msa0898730 | Msa1096210 | 0.809380 | 1.946917e-50 | -8.615850e-47 |
| Msa0905970 | Msa1096210 | 0.815726 | 7.975519e-52 | -8.615850e-47 |
| Msa0909120 | Msa1096210 | 0.813756 | 2.179266e-51 | -8.615850e-47 |
| Msa0909140 | Msa1096210 | 0.807364 | 5.239880e-50 | -8.615850e-47 |
| Msa0911540 | Msa1096210 | 0.835415 | 1.700198e-56 | -8.615850e-47 |
| Msa0922410 | Msa1096210 | 0.809036 | 2.306965e-50 | -8.615850e-47 |
| Msa0961770 | Msa1096210 | 0.811298 | 7.509277e-51 | -8.615850e-47 |
| Msa0964740 | Msa1096210 | 0.807684 | 4.482646e-50 | -8.615850e-47 |
| Msa0964840 | Msa1096210 | 0.847884 | 8.718642e-60 | -8.615850e-47 |
| Msa0967380 | Msa1096210 | 0.807714 | 4.417695e-50 | -8.615850e-47 |
| Msa0973250 | Msa1096210 | 0.803314 | 3.699260e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096210 | MtrunA17_Chr7g0222391 | 97.911 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 0.0 | 773 |
| Msa1096210 | MtrunA17_Chr3g0122881 | 44.836 | 426 | 136 | 19 | 1 | 382 | 1 | 371 | 7.32e-82 | 254 |
| Msa1096210 | MtrunA17_Chr7g0224731 | 35.411 | 401 | 181 | 20 | 1 | 382 | 1 | 342 | 1.83e-48 | 167 |
| Msa1096210 | MtrunA17_Chr7g0224671 | 29.793 | 386 | 184 | 16 | 1 | 369 | 18 | 333 | 3.76e-25 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096210 | AT5G14090.1 | 35.443 | 395 | 205 | 15 | 1 | 382 | 1 | 358 | 3.29e-47 | 164 |
| Msa1096210 | AT5G14090.2 | 39.130 | 253 | 125 | 9 | 1 | 252 | 1 | 225 | 1.79e-38 | 139 |
Find 86 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCAACTGTTGAACTTTC+TGG | 0.088694 | 7_3:-20328402 | None:intergenic |
| TTGAATGGCAAAGAAGAAAT+TGG | 0.185406 | 7_3:+20329539 | Msa1096210:exon |
| CTTTATCATCAATATTATTA+TGG | 0.201093 | 7_3:-20329755 | None:intergenic |
| AAGCAGTTTGGGTTGATAAA+TGG | 0.234817 | 7_3:+20329668 | Msa1096210:three_prime_UTR |
| AAGAAGATTCATCTTCTTAC+AGG | 0.240408 | 7_3:+20328511 | Msa1096210:CDS |
| AATTCTTGCAATTGTCTATC+AGG | 0.255482 | 7_3:+20326074 | Msa1096210:CDS |
| TTGGCTGATGAGATTTCTTT+TGG | 0.260026 | 7_3:+20326734 | Msa1096210:CDS |
| CAAAAGTATTATAAGCAGTT+TGG | 0.267736 | 7_3:+20329656 | Msa1096210:intron |
| CATAATAATATTGATGATAA+AGG | 0.271198 | 7_3:+20329756 | Msa1096210:three_prime_UTR |
| TTCCCTGGTTTCCTTGCAAT+TGG | 0.281068 | 7_3:+20326284 | Msa1096210:CDS |
| ATAAAGCATAATTGATTTAG+AGG | 0.291911 | 7_3:+20329803 | Msa1096210:three_prime_UTR |
| GAAATATTCTGCTTTGAATA+TGG | 0.298504 | 7_3:+20326805 | Msa1096210:CDS |
| GAAGAACATGAAGAAGAATA+TGG | 0.306054 | 7_3:+20326224 | Msa1096210:CDS |
| TTGAATCTGATTCCAAGATT+TGG | 0.307455 | 7_3:-20326137 | None:intergenic |
| TAAGAAGATGAATCTTCTTC+TGG | 0.308740 | 7_3:-20328507 | None:intergenic |
| CCATTACAAGGTTATTTGTT+TGG | 0.320858 | 7_3:+20326620 | Msa1096210:CDS |
| TACAGAACCATTCAAAGATT+TGG | 0.321359 | 7_3:+20325106 | Msa1096210:CDS |
| GATGAGTTAGAGAAAGTTCT+TGG | 0.327038 | 7_3:+20326434 | Msa1096210:CDS |
| TTTGTGTCTGTTCCTTCAAT+TGG | 0.329555 | 7_3:-20326587 | None:intergenic |
| AAAAGTATTATAAGCAGTTT+GGG | 0.336349 | 7_3:+20329657 | Msa1096210:intron |
| GTCGATGGATTCGATGAAAT+TGG | 0.342162 | 7_3:-20326326 | None:intergenic |
| CCATTCAAAGATTTGGTCAT+TGG | 0.344166 | 7_3:+20325113 | Msa1096210:CDS |
| AGCTGAGACTAAACTCAATA+AGG | 0.351094 | 7_3:+20326913 | Msa1096210:CDS |
| AACTTCAGAAAATCATTTGC+TGG | 0.355575 | 7_3:+20326185 | Msa1096210:CDS |
| AATTCTTTGTTGCAGTTACT+TGG | 0.374830 | 7_3:+20325050 | Msa1096210:intron |
| TGAATGGCAAAGAAGAAATT+GGG | 0.405613 | 7_3:+20329540 | Msa1096210:exon |
| TCAACAGTTGGACACAAATC+TGG | 0.407798 | 7_3:+20328411 | Msa1096210:CDS |
| TTCCTTGCAATTGGAACACT+TGG | 0.416969 | 7_3:+20326293 | Msa1096210:CDS |
| ACATACTTGCTTAACAAAAC+AGG | 0.421389 | 7_3:-20330062 | None:intergenic |
| TCTAGATTCTCCATATGTTC+CGG | 0.422180 | 7_3:+20328367 | Msa1096210:intron |
| CCAATGACCAAATCTTTGAA+TGG | 0.422656 | 7_3:-20325113 | None:intergenic |
| CTTTGTTGCAGTTACTTGGC+TGG | 0.428583 | 7_3:+20325054 | Msa1096210:intron |
| ATGCACAACGTAGCCTTTGT+TGG | 0.437594 | 7_3:-20328484 | None:intergenic |
| GCTATGTTTGATCTCTTCCC+TGG | 0.438163 | 7_3:+20326269 | Msa1096210:CDS |
| CATCTTCTTACAGGGAGCAT+TGG | 0.444506 | 7_3:+20328520 | Msa1096210:CDS |
| GTTGTTCATCTTAGATCAAA+CGG | 0.445984 | 7_3:+20329942 | Msa1096210:three_prime_UTR |
| TGCACAACGTAGCCTTTGTT+GGG | 0.450415 | 7_3:-20328483 | None:intergenic |
| TGAACTGAGATTTGAAAAGA+TGG | 0.456924 | 7_3:-20326350 | None:intergenic |
| TCATAGTATGTACTACGAAA+TGG | 0.457396 | 7_3:+20329723 | Msa1096210:three_prime_UTR |
| GTTCCAATTGCAAGGAAACC+AGG | 0.476054 | 7_3:-20326287 | None:intergenic |
| TTTAGTTCTAGAGCTTTGAA+TGG | 0.480826 | 7_3:+20329524 | Msa1096210:exon |
| ATGACCATTCAGTTGTGATC+AGG | 0.482473 | 7_3:+20329996 | Msa1096210:three_prime_UTR |
| GTCAGCATAGTAACAATAAG+TGG | 0.484365 | 7_3:+20326560 | Msa1096210:CDS |
| GGATTCCCTGCTATTACAGC+AGG | 0.489525 | 7_3:-20330041 | None:intergenic |
| TACTTCTTCCAGTGCTGACA+TGG | 0.492523 | 7_3:-20326508 | None:intergenic |
| CATCACCCTGCTGTAATAGC+AGG | 0.495099 | 7_3:+20330035 | Msa1096210:three_prime_UTR |
| TACTTCTTCCAGTGCTGACA+TGG | 0.496234 | 7_3:-20326532 | None:intergenic |
| ATTTGATAAAAGAAATGAAA+GGG | 0.497913 | 7_3:+20326775 | Msa1096210:CDS |
| CCTTGCTTAACACTGAGGTC+TGG | 0.498559 | 7_3:-20329873 | None:intergenic |
| AATGCTGTTTGTCCATTACA+AGG | 0.504317 | 7_3:+20326608 | Msa1096210:CDS |
| ACATTACACATTACTAATAG+AGG | 0.506557 | 7_3:-20329579 | None:intergenic |
| CCAAACAAATAACCTTGTAA+TGG | 0.506590 | 7_3:-20326620 | None:intergenic |
| AGAAGTAGCCATGTCAGCAC+TGG | 0.514813 | 7_3:+20326524 | Msa1096210:CDS |
| GTGTTTGTACTTATATATTG+TGG | 0.523147 | 7_3:+20329603 | Msa1096210:three_prime_UTR |
| GTTGATAAATGGAATAATTG+AGG | 0.532349 | 7_3:+20329679 | Msa1096210:three_prime_UTR |
| ATTTCGTAGTACATACTATG+AGG | 0.535027 | 7_3:-20329721 | None:intergenic |
| AGTTACTTGGCTGGATGCAT+AGG | 0.536259 | 7_3:+20325063 | Msa1096210:intron |
| ATAAGTGGAAAACCAATTGA+AGG | 0.538137 | 7_3:+20326575 | Msa1096210:CDS |
| ATTCTTGCAATTGTCTATCA+GGG | 0.548762 | 7_3:+20326075 | Msa1096210:CDS |
| AATACATGGCTACATCTACA+TGG | 0.551307 | 7_3:-20329829 | None:intergenic |
| AGAAACAGCCATGTCAGCAC+TGG | 0.552963 | 7_3:+20326500 | Msa1096210:CDS |
| ACATACTATGAGGCAGACAT+TGG | 0.560655 | 7_3:-20329711 | None:intergenic |
| ATCCAAGTGTTCCAATTGCA+AGG | 0.561455 | 7_3:-20326295 | None:intergenic |
| TCTTGAATATCAAAAGATGA+CGG | 0.567742 | 7_3:+20324938 | Msa1096210:exon |
| ATTTGAAAAGATGGTGTCGA+TGG | 0.578297 | 7_3:-20326341 | None:intergenic |
| GTCGCCTGATCACAACTGAA+TGG | 0.578393 | 7_3:-20330000 | None:intergenic |
| ATGGATTCGATGAAATTGGT+TGG | 0.584184 | 7_3:-20326322 | None:intergenic |
| TGCCCGCATGATATAATACA+TGG | 0.585738 | 7_3:-20329843 | None:intergenic |
| GAAACAGCAGTTACTAGTGT+TGG | 0.588615 | 7_3:+20326662 | Msa1096210:CDS |
| CATCCAGAAAGTTCAACAGT+TGG | 0.600759 | 7_3:+20328399 | Msa1096210:CDS |
| TCAGTGTTAAGCAAGGGACC+AGG | 0.604317 | 7_3:+20329880 | Msa1096210:three_prime_UTR |
| TTATTGTTACTATGCTGACA+TGG | 0.607345 | 7_3:-20326556 | None:intergenic |
| AGCCATGTATTATATCATGC+GGG | 0.612588 | 7_3:+20329841 | Msa1096210:three_prime_UTR |
| AGAAGATTCATCTTCTTACA+GGG | 0.613869 | 7_3:+20328512 | Msa1096210:CDS |
| AAAGAACATAGGACTTCACT+TGG | 0.618977 | 7_3:+20326689 | Msa1096210:CDS |
| TAGCCATGTATTATATCATG+CGG | 0.623965 | 7_3:+20329840 | Msa1096210:three_prime_UTR |
| CCAGACCTCAGTGTTAAGCA+AGG | 0.624951 | 7_3:+20329873 | Msa1096210:three_prime_UTR |
| TTCCAATTGCAAGGAAACCA+GGG | 0.625556 | 7_3:-20326286 | None:intergenic |
| ATCACCCTGCTGTAATAGCA+GGG | 0.630547 | 7_3:+20330036 | Msa1096210:three_prime_UTR |
| AATTTGATAAAAGAAATGAA+AGG | 0.633612 | 7_3:+20326774 | Msa1096210:CDS |
| AATGATGGAGGTCCCAACAA+AGG | 0.636070 | 7_3:+20328471 | Msa1096210:CDS |
| CAGACCTCAGTGTTAAGCAA+GGG | 0.637263 | 7_3:+20329874 | Msa1096210:three_prime_UTR |
| GTGTTGGTAAGAAAGAACAT+AGG | 0.680570 | 7_3:+20326678 | Msa1096210:CDS |
| GATTCCCTGCTATTACAGCA+GGG | 0.697523 | 7_3:-20330040 | None:intergenic |
| AGTATGTACTACGAAATGGA+AGG | 0.711602 | 7_3:+20329727 | Msa1096210:three_prime_UTR |
| TGGTCCCTTGCTTAACACTG+AGG | 0.734741 | 7_3:-20329878 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGAGAAAAATAAATAA+TGG | - | chr7_3:20325572-20325591 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAATGTTTGAATA+AGG | + | chr7_3:20327070-20327089 | Msa1096210:intron | 10.0% |
| !!! | AATGATAATTTTAAAAAGTT+CGG | + | chr7_3:20327273-20327292 | Msa1096210:intron | 10.0% |
| !!! | AATTTAATTTTTTTAGAAGT+TGG | + | chr7_3:20327300-20327319 | Msa1096210:intron | 10.0% |
| !!! | AGAAGATAATTTTATATGAT+TGG | - | chr7_3:20325007-20325026 | None:intergenic | 15.0% |
| !! | AAATTATCTTCTAATTAAGT+TGG | + | chr7_3:20325015-20325034 | Msa1096210:intron | 15.0% |
| !! | ATTAAACTTAAAAGTTATAG+TGG | - | chr7_3:20325821-20325840 | None:intergenic | 15.0% |
| !! | AAAAAAGTTAATCATATTTG+AGG | - | chr7_3:20325941-20325960 | None:intergenic | 15.0% |
| !! | AATTTGATAAAAGAAATGAA+AGG | + | chr7_3:20326774-20326793 | Msa1096210:CDS | 15.0% |
| !! | ATTTGATAAAAGAAATGAAA+GGG | + | chr7_3:20326775-20326794 | Msa1096210:CDS | 15.0% |
| !! | AATATATACTATAAGAAAAG+TGG | + | chr7_3:20327245-20327264 | Msa1096210:intron | 15.0% |
| !!! | CTTTTTCAAATTTTGTAAAT+TGG | - | chr7_3:20327361-20327380 | None:intergenic | 15.0% |
| !! | TTTACAAAATTTGAAAAAGT+AGG | + | chr7_3:20327362-20327381 | Msa1096210:intron | 15.0% |
| !! | TTACAAAATTTGAAAAAGTA+GGG | + | chr7_3:20327363-20327382 | Msa1096210:intron | 15.0% |
| !!! | CAAAATTTGAAGATTTTATA+AGG | + | chr7_3:20327489-20327508 | Msa1096210:intron | 15.0% |
| !! | TAAGTCAGTAAAAAAATTTA+AGG | + | chr7_3:20327724-20327743 | Msa1096210:intron | 15.0% |
| !! | AATACCATTAAAAATCTATT+AGG | - | chr7_3:20328148-20328167 | None:intergenic | 15.0% |
| !!! | AATAGATTTTTAATGGTATT+TGG | + | chr7_3:20328148-20328167 | Msa1096210:intron | 15.0% |
| !! | TATACTACAAAATATATATG+AGG | - | chr7_3:20328600-20328619 | None:intergenic | 15.0% |
| !!! | TGTACATTATAATTATTTTC+AGG | - | chr7_3:20328632-20328651 | None:intergenic | 15.0% |
| !!! | TTAACATTTTCTTTTCAATA+TGG | + | chr7_3:20328873-20328892 | Msa1096210:intron | 15.0% |
| !! | CTTTATCATCAATATTATTA+TGG | - | chr7_3:20329758-20329777 | None:intergenic | 15.0% |
| !!! | CATAATAATATTGATGATAA+AGG | + | chr7_3:20329756-20329775 | Msa1096210:three_prime_UTR | 15.0% |
| !!! | TTTTATTTCGAATGCTATAA+AGG | - | chr7_3:20325421-20325440 | None:intergenic | 20.0% |
| !!! | ATTATAGTTTAGTTCTTCTT+AGG | - | chr7_3:20325471-20325490 | None:intergenic | 20.0% |
| !! | TTAAAATTTGCCATGTTTAA+AGG | + | chr7_3:20325914-20325933 | Msa1096210:intron | 20.0% |
| !!! | ACTTTTTCAAAGAAGTAAAT+TGG | + | chr7_3:20326715-20326734 | Msa1096210:CDS | 20.0% |
| !!! | TATTTGTAATTGTTGTTGTT+AGG | + | chr7_3:20327148-20327167 | Msa1096210:intron | 20.0% |
| !!! | TTAATTTTTTTAGAAGTTGG+AGG | + | chr7_3:20327303-20327322 | Msa1096210:intron | 20.0% |
| !! | TAAGGATAATTGAAAATTCA+CGG | + | chr7_3:20327507-20327526 | Msa1096210:intron | 20.0% |
| !! | CAATCATATTTCACAATTAT+AGG | - | chr7_3:20327590-20327609 | None:intergenic | 20.0% |
| !! | CTATAATTGTGAAATATGAT+TGG | + | chr7_3:20327588-20327607 | Msa1096210:intron | 20.0% |
| !!! | ATTTTTTTTAAACTTGAGTC+TGG | + | chr7_3:20327779-20327798 | Msa1096210:intron | 20.0% |
| !! | AAGAAGAAAAATATGAATGA+TGG | + | chr7_3:20328456-20328475 | Msa1096210:CDS | 20.0% |
| !! | TTTGTGATATATATAGTGAA+AGG | - | chr7_3:20328713-20328732 | None:intergenic | 20.0% |
| !!! | TTTTAAACTCGACTTTTTAT+TGG | - | chr7_3:20328966-20328985 | None:intergenic | 20.0% |
| !! | TACTCTTATGTCATATTATT+AGG | + | chr7_3:20329058-20329077 | Msa1096210:intron | 20.0% |
| !!! | AGAAAATGAGCAATTTTAAA+AGG | - | chr7_3:20329099-20329118 | None:intergenic | 20.0% |
| !!! | AAGGAATGATCAATTTTAAA+AGG | + | chr7_3:20329290-20329309 | Msa1096210:intron | 20.0% |
| !!! | AGGAATGATCAATTTTAAAA+GGG | + | chr7_3:20329291-20329310 | Msa1096210:intron | 20.0% |
| !! | ATCAGTTGTTAATTATCAAT+TGG | - | chr7_3:20329382-20329401 | None:intergenic | 20.0% |
| !! | GAACAAACAAATACATATAT+AGG | - | chr7_3:20329475-20329494 | None:intergenic | 20.0% |
| !!! | AAAAGTATTATAAGCAGTTT+GGG | + | chr7_3:20329657-20329676 | Msa1096210:intron | 20.0% |
| !!! | ATAAAGCATAATTGATTTAG+AGG | + | chr7_3:20329803-20329822 | Msa1096210:three_prime_UTR | 20.0% |
| ! | TCTTGAATATCAAAAGATGA+CGG | + | chr7_3:20324938-20324957 | Msa1096210:exon | 25.0% |
| ! | TTAAATAGTCAATGCATGTT+AGG | - | chr7_3:20325190-20325209 | None:intergenic | 25.0% |
| !! | GAAAAATAATGGTTGTTGTT+AGG | - | chr7_3:20325543-20325562 | None:intergenic | 25.0% |
| ! | AATGGTCATGTGAAAAATAA+TGG | - | chr7_3:20325554-20325573 | None:intergenic | 25.0% |
| !! | AATCTTTTGTACCAATCAAT+AGG | + | chr7_3:20325643-20325662 | Msa1096210:intron | 25.0% |
| ! | ATTACTCTTGTCTAATTAAG+AGG | + | chr7_3:20325708-20325727 | Msa1096210:intron | 25.0% |
| ! | CTTATAGTCAAGATATGAAT+AGG | - | chr7_3:20325859-20325878 | None:intergenic | 25.0% |
| ! | TATCATCAAAAACCAAATCT+TGG | + | chr7_3:20326125-20326144 | Msa1096210:CDS | 25.0% |
| !! | GAAATATTCTGCTTTGAATA+TGG | + | chr7_3:20326805-20326824 | Msa1096210:CDS | 25.0% |
| ! | AAAAATTCTTCATCTACGAA+TGG | + | chr7_3:20326869-20326888 | Msa1096210:CDS | 25.0% |
| ! | TGAGTTTGACAAAATTATCA+TGG | + | chr7_3:20327028-20327047 | Msa1096210:intron | 25.0% |
| !! | TAATTGTTGTTGTTAGGATA+GGG | + | chr7_3:20327154-20327173 | Msa1096210:intron | 25.0% |
| !! | CCTATTTAGTTTAAAAGATC+GGG | - | chr7_3:20328174-20328193 | None:intergenic | 25.0% |
| !! | GCCTATTTAGTTTAAAAGAT+CGG | - | chr7_3:20328175-20328194 | None:intergenic | 25.0% |
| !! | AGCATTTTCATAAATAGAGA+AGG | - | chr7_3:20328215-20328234 | None:intergenic | 25.0% |
| !! | CTCTTCATGATTATAAGTTT+TGG | + | chr7_3:20328337-20328356 | Msa1096210:intron | 25.0% |
| ! | AAGAAAAATATGAATGATGG+AGG | + | chr7_3:20328459-20328478 | Msa1096210:CDS | 25.0% |
| !! | CATTTTCAAAGTTATCAATG+AGG | - | chr7_3:20328798-20328817 | None:intergenic | 25.0% |
| !! | ATGTTTTATCTCATTGAGAT+AGG | - | chr7_3:20329015-20329034 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAAAAGGGAGAA+GGG | + | chr7_3:20329298-20329317 | Msa1096210:intron | 25.0% |
| ! | ACATTACACATTACTAATAG+AGG | - | chr7_3:20329582-20329601 | None:intergenic | 25.0% |
| ! | GTGTTTGTACTTATATATTG+TGG | + | chr7_3:20329603-20329622 | Msa1096210:three_prime_UTR | 25.0% |
| !! | CAAACTGCTTATAATACTTT+TGG | - | chr7_3:20329658-20329677 | None:intergenic | 25.0% |
| !!! | CAAAAGTATTATAAGCAGTT+TGG | + | chr7_3:20329656-20329675 | Msa1096210:intron | 25.0% |
| !! | GTTGATAAATGGAATAATTG+AGG | + | chr7_3:20329679-20329698 | Msa1096210:three_prime_UTR | 25.0% |
| !!! | GATTGGTTTTGATTCTGAAA+AGG | - | chr7_3:20324990-20325009 | None:intergenic | 30.0% |
| AATTCTTTGTTGCAGTTACT+TGG | + | chr7_3:20325050-20325069 | Msa1096210:intron | 30.0% | |
| TACAGAACCATTCAAAGATT+TGG | + | chr7_3:20325106-20325125 | Msa1096210:CDS | 30.0% | |
| GTTAGGTAAATTGTCTTCTT+GGG | - | chr7_3:20325526-20325545 | None:intergenic | 30.0% | |
| TGTTAGGTAAATTGTCTTCT+TGG | - | chr7_3:20325527-20325546 | None:intergenic | 30.0% | |
| !! | TCTAAAGCAACATTTTTGAG+CGG | + | chr7_3:20325749-20325768 | Msa1096210:intron | 30.0% |
| TAAAAGTTATAGTGGTCGTT+TGG | - | chr7_3:20325813-20325832 | None:intergenic | 30.0% | |
| !! | ATGTTTAGACTCACTTTTGA+GGG | + | chr7_3:20325882-20325901 | Msa1096210:intron | 30.0% |
| TATTTGAGGACCTTTAAACA+TGG | - | chr7_3:20325927-20325946 | None:intergenic | 30.0% | |
| ! | TCGTTGTTTAAAGCAATCTT+TGG | + | chr7_3:20325960-20325979 | Msa1096210:intron | 30.0% |
| TTTCGTTAAAAGCGAGTTTA+AGG | - | chr7_3:20326031-20326050 | None:intergenic | 30.0% | |
| ! | AATCAATTTTTCTATGTCGC+AGG | + | chr7_3:20326050-20326069 | Msa1096210:intron | 30.0% |
| AATTCTTGCAATTGTCTATC+AGG | + | chr7_3:20326074-20326093 | Msa1096210:CDS | 30.0% | |
| ATTCTTGCAATTGTCTATCA+GGG | + | chr7_3:20326075-20326094 | Msa1096210:CDS | 30.0% | |
| ! | TTTTGTTCTTCATCAAGTGA+TGG | - | chr7_3:20326104-20326123 | None:intergenic | 30.0% |
| TTGAATCTGATTCCAAGATT+TGG | - | chr7_3:20326140-20326159 | None:intergenic | 30.0% | |
| !!! | GATTTTCTGAAGTTGTTTTG+AGG | - | chr7_3:20326179-20326198 | None:intergenic | 30.0% |
| AACTTCAGAAAATCATTTGC+TGG | + | chr7_3:20326185-20326204 | Msa1096210:CDS | 30.0% | |
| GAAGAACATGAAGAAGAATA+TGG | + | chr7_3:20326224-20326243 | Msa1096210:CDS | 30.0% | |
| TGAACTGAGATTTGAAAAGA+TGG | - | chr7_3:20326353-20326372 | None:intergenic | 30.0% | |
| ! | TTCGTTTTCATTTTCGGTTA+TGG | - | chr7_3:20326378-20326397 | None:intergenic | 30.0% |
| ! | TTCGTCTTCGTTTTCATTTT+CGG | - | chr7_3:20326384-20326403 | None:intergenic | 30.0% |
| TTATTGTTACTATGCTGACA+TGG | - | chr7_3:20326559-20326578 | None:intergenic | 30.0% | |
| ATAAGTGGAAAACCAATTGA+AGG | + | chr7_3:20326575-20326594 | Msa1096210:CDS | 30.0% | |
| CCAAACAAATAACCTTGTAA+TGG | - | chr7_3:20326623-20326642 | None:intergenic | 30.0% | |
| CCATTACAAGGTTATTTGTT+TGG | + | chr7_3:20326620-20326639 | Msa1096210:CDS | 30.0% | |
| ! | GTAATTGTTGTTGTTAGGAT+AGG | + | chr7_3:20327153-20327172 | Msa1096210:intron | 30.0% |
| TGTTAGGGTAGAAATATGTT+AGG | + | chr7_3:20327679-20327698 | Msa1096210:intron | 30.0% | |
| TCGTATTTATCTAAGTAGAC+CGG | + | chr7_3:20328122-20328141 | Msa1096210:intron | 30.0% | |
| CCATTAAAAATCTATTAGGC+CGG | - | chr7_3:20328144-20328163 | None:intergenic | 30.0% | |
| ! | CCCGATCTTTTAAACTAAAT+AGG | + | chr7_3:20328171-20328190 | Msa1096210:intron | 30.0% |
| ATCTACCAAGACCAAAAATA+CGG | - | chr7_3:20328304-20328323 | None:intergenic | 30.0% | |
| !!! | TTTTGGTCTTGGTAGATAAA+TGG | + | chr7_3:20328307-20328326 | Msa1096210:intron | 30.0% |
| !!! | TTTCTGGATGAACTTTTTTC+CGG | - | chr7_3:20328389-20328408 | None:intergenic | 30.0% |
| TAAGAAGATGAATCTTCTTC+TGG | - | chr7_3:20328510-20328529 | None:intergenic | 30.0% | |
| AAGAAGATTCATCTTCTTAC+AGG | + | chr7_3:20328511-20328530 | Msa1096210:CDS | 30.0% | |
| AGAAGATTCATCTTCTTACA+GGG | + | chr7_3:20328512-20328531 | Msa1096210:CDS | 30.0% | |
| TATGAGGTAGAGATATCATA+TGG | - | chr7_3:20328584-20328603 | None:intergenic | 30.0% | |
| ATATATATAGTGAAAGGAGG+AGG | - | chr7_3:20328707-20328726 | None:intergenic | 30.0% | |
| GTGATATATATAGTGAAAGG+AGG | - | chr7_3:20328710-20328729 | None:intergenic | 30.0% | |
| TAGAAGAAAAGAATCACTAG+TGG | + | chr7_3:20328761-20328780 | Msa1096210:intron | 30.0% | |
| TATGAGCTCATCAATTTATG+TGG | - | chr7_3:20328933-20328952 | None:intergenic | 30.0% | |
| ! | AATTGCTCATTTTCTTGATC+CGG | + | chr7_3:20329104-20329123 | Msa1096210:intron | 30.0% |
| !!! | GGTTCAATCACTTTTTAAGT+CGG | - | chr7_3:20329198-20329217 | None:intergenic | 30.0% |
| !! | TCACATTTGACATTTTTCAG+TGG | - | chr7_3:20329251-20329270 | None:intergenic | 30.0% |
| !! | GATCAATTTTAAAAGGGAGA+AGG | + | chr7_3:20329297-20329316 | Msa1096210:intron | 30.0% |
| AGAAGGGATATACTTATCAA+TGG | - | chr7_3:20329345-20329364 | None:intergenic | 30.0% | |
| ! | TAAGTATATCCCTTCTTTTG+TGG | + | chr7_3:20329349-20329368 | Msa1096210:intron | 30.0% |
| ! | AAGTATATCCCTTCTTTTGT+GGG | + | chr7_3:20329350-20329369 | Msa1096210:intron | 30.0% |
| !! | TTTAGTTCTAGAGCTTTGAA+TGG | + | chr7_3:20329524-20329543 | Msa1096210:exon | 30.0% |
| TTGAATGGCAAAGAAGAAAT+TGG | + | chr7_3:20329539-20329558 | Msa1096210:exon | 30.0% | |
| TGAATGGCAAAGAAGAAATT+GGG | + | chr7_3:20329540-20329559 | Msa1096210:exon | 30.0% | |
| ATTTCGTAGTACATACTATG+AGG | - | chr7_3:20329724-20329743 | None:intergenic | 30.0% | |
| TCATAGTATGTACTACGAAA+TGG | + | chr7_3:20329723-20329742 | Msa1096210:three_prime_UTR | 30.0% | |
| TAGCCATGTATTATATCATG+CGG | + | chr7_3:20329840-20329859 | Msa1096210:three_prime_UTR | 30.0% | |
| ! | AATTTTATAGCAGCAAAACC+TGG | - | chr7_3:20329901-20329920 | None:intergenic | 30.0% |
| GTTGTTCATCTTAGATCAAA+CGG | + | chr7_3:20329942-20329961 | Msa1096210:three_prime_UTR | 30.0% | |
| ACATACTTGCTTAACAAAAC+AGG | - | chr7_3:20330065-20330084 | None:intergenic | 30.0% | |
| CCAATGACCAAATCTTTGAA+TGG | - | chr7_3:20325116-20325135 | None:intergenic | 35.0% | |
| ! | CCATTCAAAGATTTGGTCAT+TGG | + | chr7_3:20325113-20325132 | Msa1096210:CDS | 35.0% |
| ! | GCTTTAGACAACATTTGAAG+AGG | - | chr7_3:20325737-20325756 | None:intergenic | 35.0% |
| !! | CTAAAGCAACATTTTTGAGC+GGG | + | chr7_3:20325750-20325769 | Msa1096210:intron | 35.0% |
| !! | TAAAGCAACATTTTTGAGCG+GGG | + | chr7_3:20325751-20325770 | Msa1096210:intron | 35.0% |
| !! | CATGTTTAGACTCACTTTTG+AGG | + | chr7_3:20325881-20325900 | Msa1096210:intron | 35.0% |
| ATGGATTCGATGAAATTGGT+TGG | - | chr7_3:20326325-20326344 | None:intergenic | 35.0% | |
| ! | ATTTGAAAAGATGGTGTCGA+TGG | - | chr7_3:20326344-20326363 | None:intergenic | 35.0% |
| GATGAGTTAGAGAAAGTTCT+TGG | + | chr7_3:20326434-20326453 | Msa1096210:CDS | 35.0% | |
| GTCAGCATAGTAACAATAAG+TGG | + | chr7_3:20326560-20326579 | Msa1096210:CDS | 35.0% | |
| TTTGTGTCTGTTCCTTCAAT+TGG | - | chr7_3:20326590-20326609 | None:intergenic | 35.0% | |
| ! | AATGCTGTTTGTCCATTACA+AGG | + | chr7_3:20326608-20326627 | Msa1096210:CDS | 35.0% |
| ! | GTGTTGGTAAGAAAGAACAT+AGG | + | chr7_3:20326678-20326697 | Msa1096210:CDS | 35.0% |
| AAAGAACATAGGACTTCACT+TGG | + | chr7_3:20326689-20326708 | Msa1096210:CDS | 35.0% | |
| ! | TTGGCTGATGAGATTTCTTT+TGG | + | chr7_3:20326734-20326753 | Msa1096210:CDS | 35.0% |
| AGCTGAGACTAAACTCAATA+AGG | + | chr7_3:20326913-20326932 | Msa1096210:CDS | 35.0% | |
| ! | AACCAGAACAAAAGCATGTT+TGG | + | chr7_3:20326997-20327016 | Msa1096210:intron | 35.0% |
| ! | TTCCAAACATGCTTTTGTTC+TGG | - | chr7_3:20327002-20327021 | None:intergenic | 35.0% |
| ATTTGAAGATTTCTCACTGC+TGG | + | chr7_3:20327428-20327447 | Msa1096210:intron | 35.0% | |
| ! | CCGGCCTAATAGATTTTTAA+TGG | + | chr7_3:20328141-20328160 | Msa1096210:intron | 35.0% |
| CCAAAAATACGGATGAGAAT+AGG | - | chr7_3:20328293-20328312 | None:intergenic | 35.0% | |
| ! | CCTATTCTCATCCGTATTTT+TGG | + | chr7_3:20328290-20328309 | Msa1096210:intron | 35.0% |
| TCTAGATTCTCCATATGTTC+CGG | + | chr7_3:20328367-20328386 | Msa1096210:intron | 35.0% | |
| !!! | GAACTTTTTTCCGGAACATA+TGG | - | chr7_3:20328380-20328399 | None:intergenic | 35.0% |
| GGCTTTCTCATTAATGTTGT+AGG | - | chr7_3:20328674-20328693 | None:intergenic | 35.0% | |
| GATCTCAAAAGTTCATGCAT+GGG | - | chr7_3:20329168-20329187 | None:intergenic | 35.0% | |
| !!! | CATGCATGAACTTTTGAGAT+CGG | + | chr7_3:20329167-20329186 | Msa1096210:intron | 35.0% |
| !! | AAGCAGTTTGGGTTGATAAA+TGG | + | chr7_3:20329668-20329687 | Msa1096210:three_prime_UTR | 35.0% |
| AGTATGTACTACGAAATGGA+AGG | + | chr7_3:20329727-20329746 | Msa1096210:three_prime_UTR | 35.0% | |
| AATACATGGCTACATCTACA+TGG | - | chr7_3:20329832-20329851 | None:intergenic | 35.0% | |
| AGCCATGTATTATATCATGC+GGG | + | chr7_3:20329841-20329860 | Msa1096210:three_prime_UTR | 35.0% | |
| ATGTTGCGTCTCCTATTGAT+TGG | - | chr7_3:20325657-20325676 | None:intergenic | 40.0% | |
| !! | TAGACTCACTTTTGAGGGAA+CGG | + | chr7_3:20325887-20325906 | Msa1096210:intron | 40.0% |
| TTCCAATTGCAAGGAAACCA+GGG | - | chr7_3:20326289-20326308 | None:intergenic | 40.0% | |
| TTCCTTGCAATTGGAACACT+TGG | + | chr7_3:20326293-20326312 | Msa1096210:CDS | 40.0% | |
| ATCCAAGTGTTCCAATTGCA+AGG | - | chr7_3:20326298-20326317 | None:intergenic | 40.0% | |
| ! | GTCGATGGATTCGATGAAAT+TGG | - | chr7_3:20326329-20326348 | None:intergenic | 40.0% |
| GAAACAGCAGTTACTAGTGT+TGG | + | chr7_3:20326662-20326681 | Msa1096210:CDS | 40.0% | |
| CATATAACATGCCGCATGTT+AGG | - | chr7_3:20327756-20327775 | None:intergenic | 40.0% | |
| ! | GGTCTTCTGAAAGTCTGATA+TGG | + | chr7_3:20327800-20327819 | Msa1096210:intron | 40.0% |
| ! | AATGTGACCTGACTTGTCAT+AGG | + | chr7_3:20328236-20328255 | Msa1096210:intron | 40.0% |
| TAGGTCACACCGATCTATAA+GGG | - | chr7_3:20328274-20328293 | None:intergenic | 40.0% | |
| ATAGGTCACACCGATCTATA+AGG | - | chr7_3:20328275-20328294 | None:intergenic | 40.0% | |
| !!! | CTCATCCGTATTTTTGGTCT+TGG | + | chr7_3:20328296-20328315 | Msa1096210:intron | 40.0% |
| CATCCAGAAAGTTCAACAGT+TGG | + | chr7_3:20328399-20328418 | Msa1096210:CDS | 40.0% | |
| TGTCCAACTGTTGAACTTTC+TGG | - | chr7_3:20328405-20328424 | None:intergenic | 40.0% | |
| TCAACAGTTGGACACAAATC+TGG | + | chr7_3:20328411-20328430 | Msa1096210:CDS | 40.0% | |
| AAAGGAGGAGGATACAAGTA+GGG | - | chr7_3:20328695-20328714 | None:intergenic | 40.0% | |
| AAAGAATCACTAGTGGTGTG+TGG | + | chr7_3:20328768-20328787 | Msa1096210:intron | 40.0% | |
| CGATCTCAAAAGTTCATGCA+TGG | - | chr7_3:20329169-20329188 | None:intergenic | 40.0% | |
| !! | CACGCTGACACTTTTTAGAT+CGG | - | chr7_3:20329219-20329238 | None:intergenic | 40.0% |
| AAATGTGAGTTAACTTCCGC+TGG | + | chr7_3:20329263-20329282 | Msa1096210:intron | 40.0% | |
| TGATCATTCCTTTGATCCAG+CGG | - | chr7_3:20329282-20329301 | None:intergenic | 40.0% | |
| GGCTATATCCCACAAAAGAA+GGG | - | chr7_3:20329361-20329380 | None:intergenic | 40.0% | |
| TGGCTATATCCCACAAAAGA+AGG | - | chr7_3:20329362-20329381 | None:intergenic | 40.0% | |
| TTCTTGTATATGCCACCTTG+AGG | + | chr7_3:20329404-20329423 | Msa1096210:intron | 40.0% | |
| GGCAAGGTGTAACAGAATAT+GGG | - | chr7_3:20329436-20329455 | None:intergenic | 40.0% | |
| AGGCAAGGTGTAACAGAATA+TGG | - | chr7_3:20329437-20329456 | None:intergenic | 40.0% | |
| ATAGGCGTGCTAAAAGTAGT+AGG | - | chr7_3:20329457-20329476 | None:intergenic | 40.0% | |
| ACATACTATGAGGCAGACAT+TGG | - | chr7_3:20329714-20329733 | None:intergenic | 40.0% | |
| TGCCCGCATGATATAATACA+TGG | - | chr7_3:20329846-20329865 | None:intergenic | 40.0% | |
| ATGACCATTCAGTTGTGATC+AGG | + | chr7_3:20329996-20330015 | Msa1096210:three_prime_UTR | 40.0% | |
| CTTTGTTGCAGTTACTTGGC+TGG | + | chr7_3:20325054-20325073 | Msa1096210:intron | 45.0% | |
| AGTTACTTGGCTGGATGCAT+AGG | + | chr7_3:20325063-20325082 | Msa1096210:intron | 45.0% | |
| GGGGCGATAATCATTGTTAG+CGG | + | chr7_3:20325770-20325789 | Msa1096210:intron | 45.0% | |
| GGGCGATAATCATTGTTAGC+GGG | + | chr7_3:20325771-20325790 | Msa1096210:intron | 45.0% | |
| ! | GTTAGCGGGACTTTTCAACA+TGG | + | chr7_3:20325785-20325804 | Msa1096210:intron | 45.0% |
| GCTATGTTTGATCTCTTCCC+TGG | + | chr7_3:20326269-20326288 | Msa1096210:CDS | 45.0% | |
| TTCCCTGGTTTCCTTGCAAT+TGG | + | chr7_3:20326284-20326303 | Msa1096210:CDS | 45.0% | |
| GTTCCAATTGCAAGGAAACC+AGG | - | chr7_3:20326290-20326309 | None:intergenic | 45.0% | |
| !! | TACTTCTTCCAGTGCTGACA+TGG | - | chr7_3:20326511-20326530 | None:intergenic | 45.0% |
| !! | TACTTCTTCCAGTGCTGACA+TGG | - | chr7_3:20326511-20326530 | None:intergenic | 45.0% |
| TAAGGCCTAAGCCTAACATG+CGG | + | chr7_3:20327742-20327761 | Msa1096210:intron | 45.0% | |
| ! | AATGATGGAGGTCCCAACAA+AGG | + | chr7_3:20328471-20328490 | Msa1096210:CDS | 45.0% |
| TGCACAACGTAGCCTTTGTT+GGG | - | chr7_3:20328486-20328505 | None:intergenic | 45.0% | |
| ATGCACAACGTAGCCTTTGT+TGG | - | chr7_3:20328487-20328506 | None:intergenic | 45.0% | |
| ! | CATCTTCTTACAGGGAGCAT+TGG | + | chr7_3:20328520-20328539 | Msa1096210:CDS | 45.0% |
| GAAAGGAGGAGGATACAAGT+AGG | - | chr7_3:20328696-20328715 | None:intergenic | 45.0% | |
| GTCGAGTGTGAGTTAACTTC+CGG | - | chr7_3:20329126-20329145 | None:intergenic | 45.0% | |
| GTTAACTTCCGCTGGATCAA+AGG | + | chr7_3:20329271-20329290 | Msa1096210:intron | 45.0% | |
| TGTATATGCCACCTTGAGGA+TGG | + | chr7_3:20329408-20329427 | Msa1096210:intron | 45.0% | |
| CGTGCTAAAAGTAGTAGGCA+AGG | - | chr7_3:20329452-20329471 | None:intergenic | 45.0% | |
| CAGACCTCAGTGTTAAGCAA+GGG | + | chr7_3:20329874-20329893 | Msa1096210:three_prime_UTR | 45.0% | |
| ATCACCCTGCTGTAATAGCA+GGG | + | chr7_3:20330036-20330055 | Msa1096210:three_prime_UTR | 45.0% | |
| GATTCCCTGCTATTACAGCA+GGG | - | chr7_3:20330043-20330062 | None:intergenic | 45.0% | |
| !!! | TATATAAATTTTAAAAGTTT+TGG | + | chr7_3:20327210-20327229 | Msa1096210:intron | 5.0% |
| !!! | ATATTATATTATATTTTATG+AGG | - | chr7_3:20327646-20327665 | None:intergenic | 5.0% |
| !!! | TATTTTAATTATATTTTGTT+AGG | + | chr7_3:20327663-20327682 | Msa1096210:intron | 5.0% |
| !!! | ATTTTAATTATATTTTGTTA+GGG | + | chr7_3:20327664-20327683 | Msa1096210:intron | 5.0% |
| !! | ATAAACTTAAATTATTATAA+AGG | + | chr7_3:20328039-20328058 | Msa1096210:intron | 5.0% |
| AGAAACAGCCATGTCAGCAC+TGG | + | chr7_3:20326500-20326519 | Msa1096210:CDS | 50.0% | |
| AGAAGTAGCCATGTCAGCAC+TGG | + | chr7_3:20326524-20326543 | Msa1096210:CDS | 50.0% | |
| ACATGCCGCATGTTAGGCTT+AGG | - | chr7_3:20327750-20327769 | None:intergenic | 50.0% | |
| ! | GACCTGACTTGTCATAGGCT+AGG | + | chr7_3:20328241-20328260 | Msa1096210:intron | 50.0% |
| GACCTAGCCTATGACAAGTC+AGG | - | chr7_3:20328246-20328265 | None:intergenic | 50.0% | |
| CTTGTCATAGGCTAGGTCGT+AGG | + | chr7_3:20328248-20328267 | Msa1096210:intron | 50.0% | |
| GGTCGTAGGCCCTTATAGAT+CGG | + | chr7_3:20328262-20328281 | Msa1096210:intron | 50.0% | |
| GAATATGGGCTCCATCCTCA+AGG | - | chr7_3:20329422-20329441 | None:intergenic | 50.0% | |
| CCTTGCTTAACACTGAGGTC+TGG | - | chr7_3:20329876-20329895 | None:intergenic | 50.0% | |
| CCAGACCTCAGTGTTAAGCA+AGG | + | chr7_3:20329873-20329892 | Msa1096210:three_prime_UTR | 50.0% | |
| TGGTCCCTTGCTTAACACTG+AGG | - | chr7_3:20329881-20329900 | None:intergenic | 50.0% | |
| TCAGTGTTAAGCAAGGGACC+AGG | + | chr7_3:20329880-20329899 | Msa1096210:three_prime_UTR | 50.0% | |
| GTCGCCTGATCACAACTGAA+TGG | - | chr7_3:20330003-20330022 | None:intergenic | 50.0% | |
| CATCACCCTGCTGTAATAGC+AGG | + | chr7_3:20330035-20330054 | Msa1096210:three_prime_UTR | 50.0% | |
| GGATTCCCTGCTATTACAGC+AGG | - | chr7_3:20330044-20330063 | None:intergenic | 50.0% | |
| TATGGGCTCCATCCTCAAGG+TGG | - | chr7_3:20329419-20329438 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 20324920 | 20330119 | 20324920 | ID=Msa1096210;Name=Msa1096210 |
| chr7_3 | mRNA | 20324920 | 20330119 | 20324920 | ID=Msa1096210-mRNA-1;Parent=Msa1096210;Name=Msa1096210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=34|1|1|1|0.8|0.66|6|556|382 |
| chr7_3 | exon | 20324920 | 20324959 | 20324920 | ID=Msa1096210-mRNA-1:exon:4352;Parent=Msa1096210-mRNA-1 |
| chr7_3 | exon | 20325065 | 20325134 | 20325065 | ID=Msa1096210-mRNA-1:exon:4353;Parent=Msa1096210-mRNA-1 |
| chr7_3 | exon | 20326072 | 20326934 | 20326072 | ID=Msa1096210-mRNA-1:exon:4354;Parent=Msa1096210-mRNA-1 |
| chr7_3 | exon | 20328372 | 20328561 | 20328372 | ID=Msa1096210-mRNA-1:exon:4355;Parent=Msa1096210-mRNA-1 |
| chr7_3 | exon | 20329523 | 20329640 | 20329523 | ID=Msa1096210-mRNA-1:exon:4356;Parent=Msa1096210-mRNA-1 |
| chr7_3 | exon | 20329662 | 20330119 | 20329662 | ID=Msa1096210-mRNA-1:exon:4357;Parent=Msa1096210-mRNA-1 |
| chr7_3 | five_prime_UTR | 20324920 | 20324953 | 20324920 | ID=Msa1096210-mRNA-1:five_prime_utr;Parent=Msa1096210-mRNA-1 |
| chr7_3 | CDS | 20324954 | 20324959 | 20324954 | ID=Msa1096210-mRNA-1:cds;Parent=Msa1096210-mRNA-1 |
| chr7_3 | CDS | 20325065 | 20325134 | 20325065 | ID=Msa1096210-mRNA-1:cds;Parent=Msa1096210-mRNA-1 |
| chr7_3 | CDS | 20326072 | 20326934 | 20326072 | ID=Msa1096210-mRNA-1:cds;Parent=Msa1096210-mRNA-1 |
| chr7_3 | CDS | 20328372 | 20328561 | 20328372 | ID=Msa1096210-mRNA-1:cds;Parent=Msa1096210-mRNA-1 |
| chr7_3 | CDS | 20329523 | 20329542 | 20329523 | ID=Msa1096210-mRNA-1:cds;Parent=Msa1096210-mRNA-1 |
| chr7_3 | three_prime_UTR | 20329543 | 20329640 | 20329543 | ID=Msa1096210-mRNA-1:three_prime_utr;Parent=Msa1096210-mRNA-1 |
| chr7_3 | three_prime_UTR | 20329662 | 20330119 | 20329662 | ID=Msa1096210-mRNA-1:three_prime_utr;Parent=Msa1096210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
