Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052360 | XP_003621746.2 | 97.347 | 377 | 9 | 1 | 1 | 376 | 1 | 377 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052360 | sp|Q5XV40|LAZY1_ARATH | 34.961 | 389 | 203 | 15 | 1 | 376 | 1 | 352 | 6.62e-42 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052360 | G7KUR7 | 97.347 | 377 | 9 | 1 | 1 | 376 | 1 | 377 | 0.0 | 757 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032320 | Msa1052360 | 0.805879 | 1.078798e-49 | -8.615850e-47 |
| Msa0050990 | Msa1052360 | 0.801501 | 8.738451e-49 | -8.615850e-47 |
| Msa0626220 | Msa1052360 | 0.804815 | 1.801859e-49 | -8.615850e-47 |
| Msa0626280 | Msa1052360 | 0.829263 | 5.676169e-55 | -8.615850e-47 |
| Msa0664570 | Msa1052360 | 0.803209 | 3.888188e-49 | -8.615850e-47 |
| Msa0682550 | Msa1052360 | 0.812276 | 4.600164e-51 | -8.615850e-47 |
| Msa0688500 | Msa1052360 | 0.806480 | 8.060745e-50 | -8.615850e-47 |
| Msa0737190 | Msa1052360 | 0.804675 | 1.928191e-49 | -8.615850e-47 |
| Msa0740640 | Msa1052360 | 0.804912 | 1.719754e-49 | -8.615850e-47 |
| Msa0782360 | Msa1052360 | 0.823129 | 1.635777e-53 | -8.615850e-47 |
| Msa0197100 | Msa1052360 | 0.819140 | 1.357613e-52 | -8.615850e-47 |
| Msa0212150 | Msa1052360 | 0.871722 | 5.503339e-67 | -8.615850e-47 |
| Msa0213040 | Msa1052360 | 0.829859 | 4.066539e-55 | -8.615850e-47 |
| Msa0218780 | Msa1052360 | 0.816568 | 5.170865e-52 | -8.615850e-47 |
| Msa0221290 | Msa1052360 | 0.803425 | 3.508499e-49 | -8.615850e-47 |
| Msa0385390 | Msa1052360 | 0.804484 | 2.113301e-49 | -8.615850e-47 |
| Msa0437150 | Msa1052360 | 0.807746 | 4.348893e-50 | -8.615850e-47 |
| Msa0451400 | Msa1052360 | 0.808912 | 2.453457e-50 | -8.615850e-47 |
| Msa0999300 | Msa1052360 | 0.802183 | 6.331721e-49 | -8.615850e-47 |
| Msa1010840 | Msa1052360 | 0.930422 | 1.675564e-93 | -8.615850e-47 |
| Msa1037910 | Msa1052360 | 0.803806 | 2.924460e-49 | -8.615850e-47 |
| Msa1052360 | Msa1070420 | 0.821545 | 3.814833e-53 | -8.615850e-47 |
| Msa1052360 | Msa1077000 | 0.813132 | 2.988206e-51 | -8.615850e-47 |
| Msa1052360 | Msa1096210 | 0.957023 | 7.351371e-115 | -8.615850e-47 |
| Msa1052360 | Msa1105890 | 0.805510 | 1.289362e-49 | -8.615850e-47 |
| Msa1052360 | Msa1129970 | 0.813446 | 2.548779e-51 | -8.615850e-47 |
| Msa1052360 | Msa1140640 | 0.904113 | 1.722840e-79 | -8.615850e-47 |
| Msa1052360 | Msa1179280 | 0.808394 | 3.165182e-50 | -8.615850e-47 |
| Msa1052360 | Msa1200420 | 0.816214 | 6.205586e-52 | -8.615850e-47 |
| Msa1052360 | Msa1201110 | 0.832516 | 9.039656e-56 | -8.615850e-47 |
| Msa1052360 | Msa1233560 | 0.834702 | 2.572864e-56 | -8.615850e-47 |
| Msa1052360 | Msa1253450 | 0.809353 | 1.973029e-50 | -8.615850e-47 |
| Msa1052360 | Msa1275820 | 0.803052 | 4.190831e-49 | -8.615850e-47 |
| Msa1052360 | Msa1313970 | 0.823629 | 1.249584e-53 | -8.615850e-47 |
| Msa1052360 | Msa1379970 | 0.806051 | 9.922777e-50 | -8.615850e-47 |
| Msa1052360 | Msa1393410 | 0.802697 | 4.961423e-49 | -8.615850e-47 |
| Msa1052360 | Msa1406780 | 0.804279 | 2.331584e-49 | -8.615850e-47 |
| Msa1052360 | Msa1424680 | 0.816739 | 4.733615e-52 | -8.615850e-47 |
| Msa1052360 | Msa1431850 | 0.813483 | 2.501501e-51 | -8.615850e-47 |
| Msa1052360 | Msa1435420 | 0.800502 | 1.398833e-48 | -8.615850e-47 |
| Msa1052360 | Msa1448770 | 0.800394 | 1.471444e-48 | -8.615850e-47 |
| Msa0239030 | Msa1052360 | 0.834694 | 2.584315e-56 | -8.615850e-47 |
| Msa0239800 | Msa1052360 | 0.801823 | 7.505904e-49 | -8.615850e-47 |
| Msa0252770 | Msa1052360 | 0.843934 | 1.032500e-58 | -8.615850e-47 |
| Msa0253340 | Msa1052360 | 0.824412 | 8.186601e-54 | -8.615850e-47 |
| Msa0276740 | Msa1052360 | 0.832775 | 7.798162e-56 | -8.615850e-47 |
| Msa0289920 | Msa1052360 | 0.863981 | 1.688187e-64 | -8.615850e-47 |
| Msa0292170 | Msa1052360 | 0.823140 | 1.625923e-53 | -8.615850e-47 |
| Msa0298240 | Msa1052360 | 0.825788 | 3.871709e-54 | -8.615850e-47 |
| Msa0306120 | Msa1052360 | 0.820025 | 8.529282e-53 | -8.615850e-47 |
| Msa0316680 | Msa1052360 | 0.829505 | 4.959411e-55 | -8.615850e-47 |
| Msa0317510 | Msa1052360 | 0.802428 | 5.636825e-49 | -8.615850e-47 |
| Msa0329620 | Msa1052360 | 0.834383 | 3.093574e-56 | -8.615850e-47 |
| Msa0506980 | Msa1052360 | 0.807060 | 6.076773e-50 | -8.615850e-47 |
| Msa0535320 | Msa1052360 | 0.801313 | 9.549275e-49 | -8.615850e-47 |
| Msa0537360 | Msa1052360 | 0.804345 | 2.258753e-49 | -8.615850e-47 |
| Msa0591790 | Msa1052360 | 0.811248 | 7.699679e-51 | -8.615850e-47 |
| Msa0594090 | Msa1052360 | 0.811471 | 6.886681e-51 | -8.615850e-47 |
| Msa0849280 | Msa1052360 | 0.813824 | 2.104814e-51 | -8.615850e-47 |
| Msa0851020 | Msa1052360 | 0.808959 | 2.396612e-50 | -8.615850e-47 |
| Msa0860280 | Msa1052360 | 0.826785 | 2.241441e-54 | -8.615850e-47 |
| Msa0895790 | Msa1052360 | 0.830205 | 3.348900e-55 | -8.615850e-47 |
| Msa0909120 | Msa1052360 | 0.826468 | 2.668115e-54 | -8.615850e-47 |
| Msa0909140 | Msa1052360 | 0.816748 | 4.713477e-52 | -8.615850e-47 |
| Msa0911540 | Msa1052360 | 0.803118 | 4.059700e-49 | -8.615850e-47 |
| Msa0961770 | Msa1052360 | 0.806120 | 9.599048e-50 | -8.615850e-47 |
| Msa0964740 | Msa1052360 | 0.801296 | 9.628204e-49 | -8.615850e-47 |
| Msa0964840 | Msa1052360 | 0.840961 | 6.342795e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052360 | MtrunA17_Chr7g0222391 | 97.347 | 377 | 9 | 1 | 1 | 376 | 1 | 377 | 0.0 | 757 |
| Msa1052360 | MtrunA17_Chr3g0122881 | 44.524 | 420 | 134 | 19 | 1 | 376 | 1 | 365 | 1.91e-77 | 244 |
| Msa1052360 | MtrunA17_Chr7g0224731 | 34.430 | 395 | 181 | 20 | 1 | 376 | 1 | 336 | 1.13e-43 | 155 |
| Msa1052360 | MtrunA17_Chr7g0224671 | 29.496 | 417 | 185 | 18 | 1 | 378 | 18 | 364 | 6.13e-27 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052360 | AT5G14090.1 | 34.961 | 389 | 203 | 15 | 1 | 376 | 1 | 352 | 6.73e-43 | 154 |
| Msa1052360 | AT5G14090.2 | 39.130 | 253 | 125 | 9 | 1 | 252 | 1 | 225 | 2.16e-38 | 140 |
Find 85 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCAACTGTTGAACTTTC+TGG | 0.088694 | 7_2:-20566088 | None:intergenic |
| TTGAATGGCAAAGAAGAAAT+TGG | 0.185406 | 7_2:+20567165 | Msa1052360:CDS |
| CTTTATCATCAATATTATTA+TGG | 0.201093 | 7_2:-20567365 | None:intergenic |
| ATACAGTTTGGGTTGATAAA+TGG | 0.211915 | 7_2:+20567278 | Msa1052360:three_prime_UTR |
| AATTCTTGCAATTGTCTATC+AGG | 0.255482 | 7_2:+20563731 | Msa1052360:CDS |
| TTGGCTGATGAGATTTCTTT+TGG | 0.260026 | 7_2:+20564391 | Msa1052360:CDS |
| TTCCCTGGTTTCCTTGCAAT+TGG | 0.281068 | 7_2:+20563941 | Msa1052360:CDS |
| ATAAAGCATAATTGATTTAG+AGG | 0.291911 | 7_2:+20567413 | Msa1052360:three_prime_UTR |
| GAAGAACATGAAGAAGAATA+TGG | 0.306054 | 7_2:+20563881 | Msa1052360:CDS |
| TTGAATCTGATTCCAAGATT+TGG | 0.307455 | 7_2:-20563794 | None:intergenic |
| TACAGAACCATTCAAAGATT+TGG | 0.321359 | 7_2:+20562701 | Msa1052360:CDS |
| AGGAAGATTCATCTTCTTAC+AGG | 0.324958 | 7_2:+20566197 | Msa1052360:CDS |
| CATAATAATATTGATGATAA+AGG | 0.325277 | 7_2:+20567366 | Msa1052360:three_prime_UTR |
| CCTTTACAAGGTTATTTGTT+TGG | 0.326980 | 7_2:+20564277 | Msa1052360:CDS |
| GATGAGTTAGAGAAAGTTCT+TGG | 0.327038 | 7_2:+20564091 | Msa1052360:CDS |
| TTTGTGTCTGTTCCTTCAAT+TGG | 0.329555 | 7_2:-20564244 | None:intergenic |
| GTCGATGGATTCGATGAAAT+TGG | 0.342162 | 7_2:-20563983 | None:intergenic |
| CCATTCAAAGATTTGGTCAT+TGG | 0.344166 | 7_2:+20562708 | Msa1052360:CDS |
| ATGATGTTTGTACAGCCATT+TGG | 0.346728 | 7_2:+20567728 | Msa1052360:three_prime_UTR |
| TGATGTTTGTACAGCCATTT+GGG | 0.350870 | 7_2:+20567729 | Msa1052360:three_prime_UTR |
| AACTTCAGAAAATCATTTGC+TGG | 0.355575 | 7_2:+20563842 | Msa1052360:CDS |
| GAAGTATTCTGCTTTGAATA+TGG | 0.365437 | 7_2:+20564462 | Msa1052360:CDS |
| TGTTTGTGACAAATACAGTT+TGG | 0.367077 | 7_2:+20567266 | Msa1052360:three_prime_UTR |
| TGAATGGCAAAGAAGAAATT+GGG | 0.405613 | 7_2:+20567166 | Msa1052360:CDS |
| TCAACAGTTGGACACAAATC+TGG | 0.407798 | 7_2:+20566097 | Msa1052360:CDS |
| TTCCTTGCAATTGGAACACT+TGG | 0.416969 | 7_2:+20563950 | Msa1052360:CDS |
| TCTAGATTCTCCATATGTTC+CGG | 0.422180 | 7_2:+20566053 | Msa1052360:intron |
| CCAATGACCAAATCTTTGAA+TGG | 0.422656 | 7_2:-20562708 | None:intergenic |
| ATGCACAACGTAGCCTTTGT+TGG | 0.437594 | 7_2:-20566170 | None:intergenic |
| GCTATGTTTGATCTCTTCCC+TGG | 0.438163 | 7_2:+20563926 | Msa1052360:CDS |
| CATCTTCTTACAGGGAGCAT+TGG | 0.444506 | 7_2:+20566206 | Msa1052360:CDS |
| GTTGTTCATCTTAGATCAAA+CGG | 0.445984 | 7_2:+20567558 | Msa1052360:three_prime_UTR |
| TGCACAACGTAGCCTTTGTT+GGG | 0.450415 | 7_2:-20566169 | None:intergenic |
| TGAACTGAGATTTGAAAAGA+TGG | 0.456924 | 7_2:-20564007 | None:intergenic |
| TCATAGTATGTACTACGAAA+TGG | 0.457396 | 7_2:+20567333 | Msa1052360:three_prime_UTR |
| GTTTGTGACAAATACAGTTT+GGG | 0.470209 | 7_2:+20567267 | Msa1052360:three_prime_UTR |
| GTTCCAATTGCAAGGAAACC+AGG | 0.476054 | 7_2:-20563944 | None:intergenic |
| TTTAGTTCTAGAGCTTTGAA+TGG | 0.480826 | 7_2:+20567150 | Msa1052360:CDS |
| GTCAGCATAGTAACAATAAG+TGG | 0.484365 | 7_2:+20564217 | Msa1052360:CDS |
| TGATTCCCTGCTATTACAGC+AGG | 0.487086 | 7_2:-20567659 | None:intergenic |
| CAGCACCCTGCTGTAATAGC+AGG | 0.492478 | 7_2:+20567653 | Msa1052360:three_prime_UTR |
| TACTTCTTCCAGTGCTGACA+TGG | 0.492523 | 7_2:-20564165 | None:intergenic |
| TACTTCTTCCAGTGCTGACA+TGG | 0.496234 | 7_2:-20564189 | None:intergenic |
| AATGCTGTTTGTCCTTTACA+AGG | 0.501835 | 7_2:+20564265 | Msa1052360:CDS |
| ATTTGATAAGAGAAATGAAA+GGG | 0.502426 | 7_2:+20564432 | Msa1052360:CDS |
| ACATTACACATTACTAATAG+AGG | 0.506557 | 7_2:-20567205 | None:intergenic |
| TAAGAAGATGAATCTTCCTC+TGG | 0.508466 | 7_2:-20566193 | None:intergenic |
| AGAAGTAGCCATGTCAGCAC+TGG | 0.514813 | 7_2:+20564181 | Msa1052360:CDS |
| GTGTTTGTACTTATATATTG+TGG | 0.523147 | 7_2:+20567229 | Msa1052360:three_prime_UTR |
| GTTGATAAATGGAATAATTG+AGG | 0.532349 | 7_2:+20567289 | Msa1052360:three_prime_UTR |
| ATTTCGTAGTACATACTATG+AGG | 0.535027 | 7_2:-20567331 | None:intergenic |
| AGTTACTTGGCTGGATGCAT+AGG | 0.536259 | 7_2:+20562658 | Msa1052360:intron |
| ATAAGTGGAAAACCAATTGA+AGG | 0.538137 | 7_2:+20564232 | Msa1052360:CDS |
| CCAAACAAATAACCTTGTAA+AGG | 0.544230 | 7_2:-20564277 | None:intergenic |
| ATTCTTGCAATTGTCTATCA+GGG | 0.548762 | 7_2:+20563732 | Msa1052360:CDS |
| AGAAACAGCCATGTCAGCAC+TGG | 0.552963 | 7_2:+20564157 | Msa1052360:CDS |
| ACATACTATGAGGCAGACAT+TGG | 0.560655 | 7_2:-20567321 | None:intergenic |
| ATCCAAGTGTTCCAATTGCA+AGG | 0.561455 | 7_2:-20563952 | None:intergenic |
| TGGCTACGCCTACATCTACA+TGG | 0.565175 | 7_2:-20567439 | None:intergenic |
| TCTTGAATATCAAAAGATGA+CGG | 0.567742 | 7_2:+20562538 | Msa1052360:exon |
| GTCGTCTGATCACAACTGAA+TGG | 0.569582 | 7_2:-20567618 | None:intergenic |
| AGAGGTGTCCATGTAGATGT+AGG | 0.571485 | 7_2:+20567431 | Msa1052360:three_prime_UTR |
| ATTTGAAAAGATGGTGTCGA+TGG | 0.578297 | 7_2:-20563998 | None:intergenic |
| ATGGATTCGATGAAATTGGT+TGG | 0.584184 | 7_2:-20563979 | None:intergenic |
| TGCCCGCATGATATAATACA+TGG | 0.585738 | 7_2:-20567459 | None:intergenic |
| GAAACAGCAGTTACTAGTGT+TGG | 0.588615 | 7_2:+20564319 | Msa1052360:CDS |
| CATCCAGAAAGTTCAACAGT+TGG | 0.600759 | 7_2:+20566085 | Msa1052360:CDS |
| TCAGTGTTAAGCAAGGGACC+AGG | 0.604317 | 7_2:+20567496 | Msa1052360:three_prime_UTR |
| TTATTGTTACTATGCTGACA+TGG | 0.607345 | 7_2:-20564213 | None:intergenic |
| AGCCATGTATTATATCATGC+GGG | 0.611990 | 7_2:+20567457 | Msa1052360:three_prime_UTR |
| GGAAGATTCATCTTCTTACA+GGG | 0.613869 | 7_2:+20566198 | Msa1052360:CDS |
| AAAGAACATAGGACTTCACT+TGG | 0.618977 | 7_2:+20564346 | Msa1052360:CDS |
| TTCCAATTGCAAGGAAACCA+GGG | 0.625556 | 7_2:-20563943 | None:intergenic |
| TAGCCATGTATTATATCATG+CGG | 0.626404 | 7_2:+20567456 | Msa1052360:three_prime_UTR |
| CACACCTCAGTGTTAAGCAA+GGG | 0.630023 | 7_2:+20567490 | Msa1052360:three_prime_UTR |
| AATTTGATAAGAGAAATGAA+AGG | 0.630350 | 7_2:+20564431 | Msa1052360:CDS |
| AGCACCCTGCTGTAATAGCA+GGG | 0.630547 | 7_2:+20567654 | Msa1052360:three_prime_UTR |
| CCACACCTCAGTGTTAAGCA+AGG | 0.630799 | 7_2:+20567489 | Msa1052360:three_prime_UTR |
| AATGATGGAGGTCCCAACAA+AGG | 0.636070 | 7_2:+20566157 | Msa1052360:CDS |
| CCTTGCTTAACACTGAGGTG+TGG | 0.650059 | 7_2:-20567489 | None:intergenic |
| AGCTGAGACTAAACTCAACA+AGG | 0.662833 | 7_2:+20564570 | Msa1052360:CDS |
| GTGTTGGTAAGAAAGAACAT+AGG | 0.680570 | 7_2:+20564335 | Msa1052360:CDS |
| GATTCCCTGCTATTACAGCA+GGG | 0.695083 | 7_2:-20567658 | None:intergenic |
| AGTATGTACTACGAAATGGA+AGG | 0.711602 | 7_2:+20567337 | Msa1052360:three_prime_UTR |
| TGGTCCCTTGCTTAACACTG+AGG | 0.734741 | 7_2:-20567494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACTATTTTATTTTGA+TGG | - | chr7_2:20563056-20563075 | None:intergenic | 10.0% |
| !! | AATATATAGCATAATAAAAA+TGG | + | chr7_2:20564985-20565004 | Msa1052360:intron | 10.0% |
| !!! | AATGATAATTTTAAAAAGTT+TGG | + | chr7_2:20565013-20565032 | Msa1052360:intron | 10.0% |
| !!! | TTTTTTCAAATTTTGTAAAT+TGG | - | chr7_2:20565101-20565120 | None:intergenic | 10.0% |
| !!! | TATAATATTTTCATTACTTT+TGG | + | chr7_2:20565336-20565355 | Msa1052360:intron | 10.0% |
| !! | AATATACTACAAAATATATA+TGG | - | chr7_2:20566270-20566289 | None:intergenic | 10.0% |
| !!! | AGAAGATAATTTTATATGAT+TGG | - | chr7_2:20562607-20562626 | None:intergenic | 15.0% |
| !! | ATTAAACTTAAAAGTTATAG+TGG | - | chr7_2:20563478-20563497 | None:intergenic | 15.0% |
| !! | AAAAAAGTTAATCATATTTG+AGG | - | chr7_2:20563598-20563617 | None:intergenic | 15.0% |
| !!! | TAATTTTTGTTGTTTAGATA+GGG | + | chr7_2:20564903-20564922 | Msa1052360:intron | 15.0% |
| !!! | TATATAAATTTTAAAAGCCT+TGG | + | chr7_2:20564950-20564969 | Msa1052360:intron | 15.0% |
| !!! | ATATTTATATTTTTACTCCA+AGG | - | chr7_2:20564970-20564989 | None:intergenic | 15.0% |
| !!! | TTCAAATTTAATTTTTTGAG+AGG | + | chr7_2:20565036-20565055 | Msa1052360:intron | 15.0% |
| !! | TTACAAAATTTGAAAAAAGT+AGG | + | chr7_2:20565103-20565122 | Msa1052360:intron | 15.0% |
| !! | TACAAAATTTGAAAAAAGTA+GGG | + | chr7_2:20565104-20565123 | Msa1052360:intron | 15.0% |
| !! | TTAAAAAATAAGCTTATAAC+AGG | - | chr7_2:20565452-20565471 | None:intergenic | 15.0% |
| !!! | ATGATTATAAATTTTGGATT+TGG | + | chr7_2:20566028-20566047 | Msa1052360:intron | 15.0% |
| !! | CTTTATCATCAATATTATTA+TGG | - | chr7_2:20567368-20567387 | None:intergenic | 15.0% |
| !!! | CATAATAATATTGATGATAA+AGG | + | chr7_2:20567366-20567385 | Msa1052360:three_prime_UTR | 15.0% |
| !!! | TTTTGTTTTCGTAAGTTATT+TGG | + | chr7_2:20562897-20562916 | Msa1052360:intron | 20.0% |
| !! | GAACTTATGAAAAAAACTTA+CGG | - | chr7_2:20562963-20562982 | None:intergenic | 20.0% |
| !! | AATAATGAATTTACCAATCA+TGG | + | chr7_2:20563092-20563111 | Msa1052360:intron | 20.0% |
| !! | TTAAAATTTGCCATGTTTAA+AGG | + | chr7_2:20563571-20563590 | Msa1052360:intron | 20.0% |
| !!! | TTAACTTTTTTCGTTGTTTA+AGG | + | chr7_2:20563607-20563626 | Msa1052360:intron | 20.0% |
| !! | AATTTGATAAGAGAAATGAA+AGG | + | chr7_2:20564431-20564450 | Msa1052360:CDS | 20.0% |
| !! | ATTTGATAAGAGAAATGAAA+GGG | + | chr7_2:20564432-20564451 | Msa1052360:CDS | 20.0% |
| !! | AAAAATTCTTCATCTACAAA+TGG | + | chr7_2:20564526-20564545 | Msa1052360:CDS | 20.0% |
| !! | AATTTGTATCACAATATGTT+CGG | + | chr7_2:20564797-20564816 | Msa1052360:intron | 20.0% |
| !!! | GTAATTTTTGTTGTTTAGAT+AGG | + | chr7_2:20564902-20564921 | Msa1052360:intron | 20.0% |
| !!! | CACAATTTGAAAATTTTACA+AGG | + | chr7_2:20565166-20565185 | Msa1052360:intron | 20.0% |
| !! | TATATGAGGTAAATAAAAAG+AGG | - | chr7_2:20565308-20565327 | None:intergenic | 20.0% |
| !!! | ATTTTCATTACTTTTGGTTA+AGG | + | chr7_2:20565342-20565361 | Msa1052360:intron | 20.0% |
| !!! | TTTTCATTACTTTTGGTTAA+GGG | + | chr7_2:20565343-20565362 | Msa1052360:intron | 20.0% |
| !! | TTGATCTGTCAAAAAATTTA+AGG | + | chr7_2:20565408-20565427 | Msa1052360:intron | 20.0% |
| !! | ATAAGCTTAAATTAATGTAC+AGG | + | chr7_2:20565722-20565741 | Msa1052360:intron | 20.0% |
| !!! | CTGTTCATGATTATAAATTT+TGG | + | chr7_2:20566022-20566041 | Msa1052360:intron | 20.0% |
| !! | AAGAAGAAAAATATGAATGA+TGG | + | chr7_2:20566142-20566161 | Msa1052360:CDS | 20.0% |
| !!! | TTTTAAACTCGACTTTTTAT+TGG | - | chr7_2:20566588-20566607 | None:intergenic | 20.0% |
| !! | TACTCTTATGTCATATTATT+AGG | + | chr7_2:20566681-20566700 | Msa1052360:intron | 20.0% |
| !!! | AGAAAATGAGCAATTTTAAA+AGG | - | chr7_2:20566722-20566741 | None:intergenic | 20.0% |
| !!! | AAGGAATGATCAATTTTAAA+AGG | + | chr7_2:20566916-20566935 | Msa1052360:intron | 20.0% |
| !!! | AGGAATGATCAATTTTAAAA+GGG | + | chr7_2:20566917-20566936 | Msa1052360:intron | 20.0% |
| !! | ATCAGTTGTTAATTATCAAT+TGG | - | chr7_2:20567008-20567027 | None:intergenic | 20.0% |
| !! | GAACAAACAAATACATATAT+AGG | - | chr7_2:20567101-20567120 | None:intergenic | 20.0% |
| !!! | ATAAAGCATAATTGATTTAG+AGG | + | chr7_2:20567413-20567432 | Msa1052360:three_prime_UTR | 20.0% |
| ! | TCTTGAATATCAAAAGATGA+CGG | + | chr7_2:20562538-20562557 | Msa1052360:exon | 25.0% |
| !!! | AATTTTTTGTTGCAGTTACT+TGG | + | chr7_2:20562645-20562664 | Msa1052360:intron | 25.0% |
| ! | TTAAATAGTCAATGCATGTT+AGG | - | chr7_2:20562783-20562802 | None:intergenic | 25.0% |
| !!! | TATTATAGTTTAGTTCTCCT+TGG | - | chr7_2:20563145-20563164 | None:intergenic | 25.0% |
| !! | TTTATTCAATGGTTGTTGTT+AGG | - | chr7_2:20563216-20563235 | None:intergenic | 25.0% |
| ! | TAGCACATAACTTTATTCAA+TGG | - | chr7_2:20563227-20563246 | None:intergenic | 25.0% |
| !! | AATCTTTTGTACCAATCAAT+AGG | + | chr7_2:20563300-20563319 | Msa1052360:intron | 25.0% |
| ! | ATTACTCTTGTCTAATTAAG+AGG | + | chr7_2:20563365-20563384 | Msa1052360:intron | 25.0% |
| ! | CTTATAGTCAAGATATGAAT+AGG | - | chr7_2:20563516-20563535 | None:intergenic | 25.0% |
| !!! | ATGTTTAGACTCACTTTTAA+GGG | + | chr7_2:20563539-20563558 | Msa1052360:intron | 25.0% |
| ! | TTTCGTTAAAAGAGAGTTTA+AGG | - | chr7_2:20563688-20563707 | None:intergenic | 25.0% |
| ! | TATCATCAAAAACCAAATCT+TGG | + | chr7_2:20563782-20563801 | Msa1052360:CDS | 25.0% |
| !!! | ACTTTTTCAGAGAAGTAAAT+TGG | + | chr7_2:20564372-20564391 | Msa1052360:CDS | 25.0% |
| !!! | AGTTTGTTACTCATTAGTTA+AGG | + | chr7_2:20564772-20564791 | Msa1052360:intron | 25.0% |
| ! | ATTTGTATCACAATATGTTC+GGG | + | chr7_2:20564798-20564817 | Msa1052360:intron | 25.0% |
| !!! | AATTTAATTTTTTGAGAGGC+TGG | + | chr7_2:20565040-20565059 | Msa1052360:intron | 25.0% |
| !! | CAAGGATAATTTGAAATTCA+CGG | + | chr7_2:20565184-20565203 | Msa1052360:intron | 25.0% |
| ! | TTACTCATATTTGCTTAAGT+AGG | + | chr7_2:20565800-20565819 | Msa1052360:intron | 25.0% |
| !!! | AAGCTTTTTTTAATGGTCTT+TGG | + | chr7_2:20565833-20565852 | Msa1052360:intron | 25.0% |
| !! | ATAGACTTCTAAAAAAACCT+AGG | + | chr7_2:20565874-20565893 | Msa1052360:intron | 25.0% |
| ! | GACTGTATACTTATATAAAC+CGG | + | chr7_2:20565948-20565967 | Msa1052360:intron | 25.0% |
| ! | TATCTACCAAGACAAAAATA+GGG | - | chr7_2:20565990-20566009 | None:intergenic | 25.0% |
| ! | TTATCTACCAAGACAAAAAT+AGG | - | chr7_2:20565991-20566010 | None:intergenic | 25.0% |
| !! | TTTTTGTCTTGGTAGATAAA+TGG | + | chr7_2:20565992-20566011 | Msa1052360:intron | 25.0% |
| ! | AAGAAAAATATGAATGATGG+AGG | + | chr7_2:20566145-20566164 | Msa1052360:CDS | 25.0% |
| !! | TTCTTTTTGTGATACAAGTA+GGG | - | chr7_2:20566360-20566379 | None:intergenic | 25.0% |
| !! | CATTTTCAAAGTTATCAATG+AGG | - | chr7_2:20566425-20566444 | None:intergenic | 25.0% |
| !! | ATGTTTTATCTCATTGAGAT+AGG | - | chr7_2:20566638-20566657 | None:intergenic | 25.0% |
| !!! | TGTTCAATCACTTTTTAAGT+CGG | - | chr7_2:20566824-20566843 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAAAAGGGAGAA+GGG | + | chr7_2:20566924-20566943 | Msa1052360:intron | 25.0% |
| ! | ACATTACACATTACTAATAG+AGG | - | chr7_2:20567208-20567227 | None:intergenic | 25.0% |
| ! | GTGTTTGTACTTATATATTG+TGG | + | chr7_2:20567229-20567248 | Msa1052360:three_prime_UTR | 25.0% |
| !! | GTTGATAAATGGAATAATTG+AGG | + | chr7_2:20567289-20567308 | Msa1052360:three_prime_UTR | 25.0% |
| !!! | GATTGGTTTTGATTCTGAAA+AGG | - | chr7_2:20562590-20562609 | None:intergenic | 30.0% |
| TACAGAACCATTCAAAGATT+TGG | + | chr7_2:20562701-20562720 | Msa1052360:CDS | 30.0% | |
| ! | CTTTGTTTGAATTGCGTTAT+TGG | - | chr7_2:20563024-20563043 | None:intergenic | 30.0% |
| !!! | TTTTATTTTGATGGCCATCA+AGG | - | chr7_2:20563047-20563066 | None:intergenic | 30.0% |
| GTTAGGTAAATTGTCTTCTT+GGG | - | chr7_2:20563199-20563218 | None:intergenic | 30.0% | |
| TGTTAGGTAAATTGTCTTCT+TGG | - | chr7_2:20563200-20563219 | None:intergenic | 30.0% | |
| ! | CTTTTCAACATGGTTTCAAA+CGG | + | chr7_2:20563452-20563471 | Msa1052360:intron | 30.0% |
| !! | CATGTTTAGACTCACTTTTA+AGG | + | chr7_2:20563538-20563557 | Msa1052360:intron | 30.0% |
| TATTTGAGGACCTTTAAACA+TGG | - | chr7_2:20563584-20563603 | None:intergenic | 30.0% | |
| AATTCTTGCAATTGTCTATC+AGG | + | chr7_2:20563731-20563750 | Msa1052360:CDS | 30.0% | |
| ATTCTTGCAATTGTCTATCA+GGG | + | chr7_2:20563732-20563751 | Msa1052360:CDS | 30.0% | |
| ! | TTTTGTTCTTCATCAAGTGA+TGG | - | chr7_2:20563761-20563780 | None:intergenic | 30.0% |
| TTGAATCTGATTCCAAGATT+TGG | - | chr7_2:20563797-20563816 | None:intergenic | 30.0% | |
| !!! | GATTTTCTGAAGTTGTTTTG+AGG | - | chr7_2:20563836-20563855 | None:intergenic | 30.0% |
| AACTTCAGAAAATCATTTGC+TGG | + | chr7_2:20563842-20563861 | Msa1052360:CDS | 30.0% | |
| GAAGAACATGAAGAAGAATA+TGG | + | chr7_2:20563881-20563900 | Msa1052360:CDS | 30.0% | |
| TGAACTGAGATTTGAAAAGA+TGG | - | chr7_2:20564010-20564029 | None:intergenic | 30.0% | |
| ! | TTCGTTTTCATTTTCGGTTA+TGG | - | chr7_2:20564035-20564054 | None:intergenic | 30.0% |
| ! | TTCGTCTTCGTTTTCATTTT+CGG | - | chr7_2:20564041-20564060 | None:intergenic | 30.0% |
| TTATTGTTACTATGCTGACA+TGG | - | chr7_2:20564216-20564235 | None:intergenic | 30.0% | |
| ATAAGTGGAAAACCAATTGA+AGG | + | chr7_2:20564232-20564251 | Msa1052360:CDS | 30.0% | |
| CCAAACAAATAACCTTGTAA+AGG | - | chr7_2:20564280-20564299 | None:intergenic | 30.0% | |
| CCTTTACAAGGTTATTTGTT+TGG | + | chr7_2:20564277-20564296 | Msa1052360:CDS | 30.0% | |
| ! | GAAGTATTCTGCTTTGAATA+TGG | + | chr7_2:20564462-20564481 | Msa1052360:CDS | 30.0% |
| TATCAAACATGCATTTGTTC+TGG | - | chr7_2:20564636-20564655 | None:intergenic | 30.0% | |
| AGAAACTTTGATGAACTAGA+AGG | - | chr7_2:20564722-20564741 | None:intergenic | 30.0% | |
| CAATATGTTCGGGAAATATT+TGG | + | chr7_2:20564808-20564827 | Msa1052360:intron | 30.0% | |
| TCATATTTGCTTAAGTAGGT+CGG | + | chr7_2:20565804-20565823 | Msa1052360:intron | 30.0% | |
| !!! | GTCGGATAAGCTTTTTTTAA+TGG | + | chr7_2:20565826-20565845 | Msa1052360:intron | 30.0% |
| !!! | GCTTTTTTCATATGCAATGA+AGG | - | chr7_2:20565900-20565919 | None:intergenic | 30.0% |
| ACAAAAATAGGGATAGGAAT+TGG | - | chr7_2:20565979-20565998 | None:intergenic | 30.0% | |
| !!! | TTTCTGGATGAACTTTTTTC+CGG | - | chr7_2:20566075-20566094 | None:intergenic | 30.0% |
| ! | GTTCTTTTTGTGATACAAGT+AGG | - | chr7_2:20566361-20566380 | None:intergenic | 30.0% |
| AGAAGAAAAGAATCACTAGT+AGG | + | chr7_2:20566388-20566407 | Msa1052360:intron | 30.0% | |
| TATGACCTCATCAATTTATG+TGG | - | chr7_2:20566555-20566574 | None:intergenic | 30.0% | |
| !! | TCACATTTGACATTTTTCAG+TGG | - | chr7_2:20566877-20566896 | None:intergenic | 30.0% |
| !! | GATCAATTTTAAAAGGGAGA+AGG | + | chr7_2:20566923-20566942 | Msa1052360:intron | 30.0% |
| AGAAGGGATATACTTATCAA+TGG | - | chr7_2:20566971-20566990 | None:intergenic | 30.0% | |
| ! | TAAGTATATCCCTTCTTTTG+TGG | + | chr7_2:20566975-20566994 | Msa1052360:intron | 30.0% |
| ! | AAGTATATCCCTTCTTTTGT+GGG | + | chr7_2:20566976-20566995 | Msa1052360:intron | 30.0% |
| !! | TTTAGTTCTAGAGCTTTGAA+TGG | + | chr7_2:20567150-20567169 | Msa1052360:CDS | 30.0% |
| TTGAATGGCAAAGAAGAAAT+TGG | + | chr7_2:20567165-20567184 | Msa1052360:CDS | 30.0% | |
| TGAATGGCAAAGAAGAAATT+GGG | + | chr7_2:20567166-20567185 | Msa1052360:CDS | 30.0% | |
| TGTTTGTGACAAATACAGTT+TGG | + | chr7_2:20567266-20567285 | Msa1052360:three_prime_UTR | 30.0% | |
| GTTTGTGACAAATACAGTTT+GGG | + | chr7_2:20567267-20567286 | Msa1052360:three_prime_UTR | 30.0% | |
| !! | ATACAGTTTGGGTTGATAAA+TGG | + | chr7_2:20567278-20567297 | Msa1052360:three_prime_UTR | 30.0% |
| ATTTCGTAGTACATACTATG+AGG | - | chr7_2:20567334-20567353 | None:intergenic | 30.0% | |
| TCATAGTATGTACTACGAAA+TGG | + | chr7_2:20567333-20567352 | Msa1052360:three_prime_UTR | 30.0% | |
| TAGCCATGTATTATATCATG+CGG | + | chr7_2:20567456-20567475 | Msa1052360:three_prime_UTR | 30.0% | |
| ! | AATTTTATAGCAGCAAAACC+TGG | - | chr7_2:20567517-20567536 | None:intergenic | 30.0% |
| GTTGTTCATCTTAGATCAAA+CGG | + | chr7_2:20567558-20567577 | Msa1052360:three_prime_UTR | 30.0% | |
| CCAATGACCAAATCTTTGAA+TGG | - | chr7_2:20562711-20562730 | None:intergenic | 35.0% | |
| ! | CCATTCAAAGATTTGGTCAT+TGG | + | chr7_2:20562708-20562727 | Msa1052360:CDS | 35.0% |
| CAATTCAAACAAAGCCTTGA+TGG | + | chr7_2:20563030-20563049 | Msa1052360:intron | 35.0% | |
| ACCAATCATGGATGAGTAAT+TGG | + | chr7_2:20563104-20563123 | Msa1052360:intron | 35.0% | |
| TCCAATTACTCATCCATGAT+TGG | - | chr7_2:20563108-20563127 | None:intergenic | 35.0% | |
| ! | TCCAAAGCAACAATTTTGAG+CGG | + | chr7_2:20563406-20563425 | Msa1052360:intron | 35.0% |
| ! | CGTTTGAAACCATGTTGAAA+AGG | - | chr7_2:20563454-20563473 | None:intergenic | 35.0% |
| !! | TAGACTCACTTTTAAGGGAA+CGG | + | chr7_2:20563544-20563563 | Msa1052360:intron | 35.0% |
| ! | TCGTTGTTTAAGGCAATCTT+TGG | + | chr7_2:20563617-20563636 | Msa1052360:intron | 35.0% |
| ! | AATCAATTTTTCTCTGTCGC+AGG | + | chr7_2:20563707-20563726 | Msa1052360:intron | 35.0% |
| ATGGATTCGATGAAATTGGT+TGG | - | chr7_2:20563982-20564001 | None:intergenic | 35.0% | |
| ! | ATTTGAAAAGATGGTGTCGA+TGG | - | chr7_2:20564001-20564020 | None:intergenic | 35.0% |
| GATGAGTTAGAGAAAGTTCT+TGG | + | chr7_2:20564091-20564110 | Msa1052360:CDS | 35.0% | |
| GTCAGCATAGTAACAATAAG+TGG | + | chr7_2:20564217-20564236 | Msa1052360:CDS | 35.0% | |
| TTTGTGTCTGTTCCTTCAAT+TGG | - | chr7_2:20564247-20564266 | None:intergenic | 35.0% | |
| ! | AATGCTGTTTGTCCTTTACA+AGG | + | chr7_2:20564265-20564284 | Msa1052360:CDS | 35.0% |
| ! | GTGTTGGTAAGAAAGAACAT+AGG | + | chr7_2:20564335-20564354 | Msa1052360:CDS | 35.0% |
| AAAGAACATAGGACTTCACT+TGG | + | chr7_2:20564346-20564365 | Msa1052360:CDS | 35.0% | |
| ! | TTGGCTGATGAGATTTCTTT+TGG | + | chr7_2:20564391-20564410 | Msa1052360:CDS | 35.0% |
| !! | TTGACGAAAGTATTGTGACA+AGG | + | chr7_2:20564667-20564686 | Msa1052360:intron | 35.0% |
| !!! | TTAATTTTTTGAGAGGCTGG+AGG | + | chr7_2:20565043-20565062 | Msa1052360:intron | 35.0% |
| CTGCAATTGTGACATATGAT+TGG | + | chr7_2:20565264-20565283 | Msa1052360:intron | 35.0% | |
| !! | TCATTACTTTTGGTTAAGGG+TGG | + | chr7_2:20565346-20565365 | Msa1052360:intron | 35.0% |
| !! | CATTACTTTTGGTTAAGGGT+GGG | + | chr7_2:20565347-20565366 | Msa1052360:intron | 35.0% |
| !!! | TCCTATCCCTATTTTTGTCT+TGG | + | chr7_2:20565981-20566000 | Msa1052360:intron | 35.0% |
| ACCAAGACAAAAATAGGGAT+AGG | - | chr7_2:20565985-20566004 | None:intergenic | 35.0% | |
| TCTAGATTCTCCATATGTTC+CGG | + | chr7_2:20566053-20566072 | Msa1052360:intron | 35.0% | |
| !!! | GAACTTTTTTCCGGAACATA+TGG | - | chr7_2:20566066-20566085 | None:intergenic | 35.0% |
| TAAGAAGATGAATCTTCCTC+TGG | - | chr7_2:20566196-20566215 | None:intergenic | 35.0% | |
| AGGAAGATTCATCTTCTTAC+AGG | + | chr7_2:20566197-20566216 | Msa1052360:CDS | 35.0% | |
| GGAAGATTCATCTTCTTACA+GGG | + | chr7_2:20566198-20566217 | Msa1052360:CDS | 35.0% | |
| GGCTTTCTCATTATTGTTGT+AGG | - | chr7_2:20566339-20566358 | None:intergenic | 35.0% | |
| GAGTTCCACATAAATTGATG+AGG | + | chr7_2:20566547-20566566 | Msa1052360:intron | 35.0% | |
| AAGTTCATGCATGAGTTAAC+TGG | - | chr7_2:20566786-20566805 | None:intergenic | 35.0% | |
| !!! | CATGCATGAACTTTTGAGAT+CGG | + | chr7_2:20566793-20566812 | Msa1052360:intron | 35.0% |
| AGTATGTACTACGAAATGGA+AGG | + | chr7_2:20567337-20567356 | Msa1052360:three_prime_UTR | 35.0% | |
| AGCCATGTATTATATCATGC+GGG | + | chr7_2:20567457-20567476 | Msa1052360:three_prime_UTR | 35.0% | |
| ATGATGTTTGTACAGCCATT+TGG | + | chr7_2:20567728-20567747 | Msa1052360:three_prime_UTR | 35.0% | |
| TGATGTTTGTACAGCCATTT+GGG | + | chr7_2:20567729-20567748 | Msa1052360:three_prime_UTR | 35.0% | |
| ! | TTTTGTTGCAGTTACTTGGC+TGG | + | chr7_2:20562649-20562668 | Msa1052360:intron | 40.0% |
| GTAGCTTGAAAACAGCATGT+TGG | - | chr7_2:20562738-20562757 | None:intergenic | 40.0% | |
| ! | GGAACAAAAGTATGTAGCCA+AGG | + | chr7_2:20563125-20563144 | Msa1052360:intron | 40.0% |
| ATGTTGCGTCTCCTATTGAT+TGG | - | chr7_2:20563314-20563333 | None:intergenic | 40.0% | |
| ! | GCTTTGGACAACATTTGAAG+AGG | - | chr7_2:20563394-20563413 | None:intergenic | 40.0% |
| ! | CCAAAGCAACAATTTTGAGC+GGG | + | chr7_2:20563407-20563426 | Msa1052360:intron | 40.0% |
| ! | CAAAGCAACAATTTTGAGCG+GGG | + | chr7_2:20563408-20563427 | Msa1052360:intron | 40.0% |
| TTCCAATTGCAAGGAAACCA+GGG | - | chr7_2:20563946-20563965 | None:intergenic | 40.0% | |
| TTCCTTGCAATTGGAACACT+TGG | + | chr7_2:20563950-20563969 | Msa1052360:CDS | 40.0% | |
| ATCCAAGTGTTCCAATTGCA+AGG | - | chr7_2:20563955-20563974 | None:intergenic | 40.0% | |
| ! | GTCGATGGATTCGATGAAAT+TGG | - | chr7_2:20563986-20564005 | None:intergenic | 40.0% |
| GAAACAGCAGTTACTAGTGT+TGG | + | chr7_2:20564319-20564338 | Msa1052360:CDS | 40.0% | |
| AGCTGAGACTAAACTCAACA+AGG | + | chr7_2:20564570-20564589 | Msa1052360:CDS | 40.0% | |
| GTTAAGGGTGGGAATAAGTT+AGG | + | chr7_2:20565358-20565377 | Msa1052360:intron | 40.0% | |
| ! | AGGCTGAACAAAGCTTTGTA+AGG | + | chr7_2:20565378-20565397 | Msa1052360:intron | 40.0% |
| ACAGGCTTCATGCTAAGATT+AGG | - | chr7_2:20565434-20565453 | None:intergenic | 40.0% | |
| ATTTGCTTAAGTAGGTCGGT+CGG | + | chr7_2:20565808-20565827 | Msa1052360:intron | 40.0% | |
| TTCATATGCAATGAAGGCCT+AGG | - | chr7_2:20565894-20565913 | None:intergenic | 40.0% | |
| GGGATAGGAATTGGTTAAAC+CGG | - | chr7_2:20565970-20565989 | None:intergenic | 40.0% | |
| CATCCAGAAAGTTCAACAGT+TGG | + | chr7_2:20566085-20566104 | Msa1052360:CDS | 40.0% | |
| TGTCCAACTGTTGAACTTTC+TGG | - | chr7_2:20566091-20566110 | None:intergenic | 40.0% | |
| TCAACAGTTGGACACAAATC+TGG | + | chr7_2:20566097-20566116 | Msa1052360:CDS | 40.0% | |
| AAGAATCACTAGTAGGTGTG+TGG | + | chr7_2:20566395-20566414 | Msa1052360:intron | 40.0% | |
| ! | TGCTCATTTTCTTGATCCAG+CGG | + | chr7_2:20566730-20566749 | Msa1052360:intron | 40.0% |
| AAATGTGAGTTAACTTCCGC+TGG | + | chr7_2:20566889-20566908 | Msa1052360:intron | 40.0% | |
| TGATCATTCCTTTGATCCAG+CGG | - | chr7_2:20566908-20566927 | None:intergenic | 40.0% | |
| GGCTATATCCCACAAAAGAA+GGG | - | chr7_2:20566987-20567006 | None:intergenic | 40.0% | |
| TGGCTATATCCCACAAAAGA+AGG | - | chr7_2:20566988-20567007 | None:intergenic | 40.0% | |
| !! | TTCGTGTATATGCCACTTTG+AGG | + | chr7_2:20567030-20567049 | Msa1052360:intron | 40.0% |
| !! | TGTATATGCCACTTTGAGGA+TGG | + | chr7_2:20567034-20567053 | Msa1052360:intron | 40.0% |
| GGCAAGGTGTAACAGAATAT+GGG | - | chr7_2:20567062-20567081 | None:intergenic | 40.0% | |
| AGGCAAGGTGTAACAGAATA+TGG | - | chr7_2:20567063-20567082 | None:intergenic | 40.0% | |
| ATAGGCGTGCTAAAAGTAGT+AGG | - | chr7_2:20567083-20567102 | None:intergenic | 40.0% | |
| ACATACTATGAGGCAGACAT+TGG | - | chr7_2:20567324-20567343 | None:intergenic | 40.0% | |
| TGCCCGCATGATATAATACA+TGG | - | chr7_2:20567462-20567481 | None:intergenic | 40.0% | |
| AGTTACTTGGCTGGATGCAT+AGG | + | chr7_2:20562658-20562677 | Msa1052360:intron | 45.0% | |
| ! | CCCGCTCAAAATTGTTGCTT+TGG | - | chr7_2:20563410-20563429 | None:intergenic | 45.0% |
| GGGGCGATAATCATTGTTAG+CGG | + | chr7_2:20563427-20563446 | Msa1052360:intron | 45.0% | |
| !! | GTTAGCGGACCTTTTCAACA+TGG | + | chr7_2:20563442-20563461 | Msa1052360:intron | 45.0% |
| GCTATGTTTGATCTCTTCCC+TGG | + | chr7_2:20563926-20563945 | Msa1052360:CDS | 45.0% | |
| TTCCCTGGTTTCCTTGCAAT+TGG | + | chr7_2:20563941-20563960 | Msa1052360:CDS | 45.0% | |
| GTTCCAATTGCAAGGAAACC+AGG | - | chr7_2:20563947-20563966 | None:intergenic | 45.0% | |
| !! | TACTTCTTCCAGTGCTGACA+TGG | - | chr7_2:20564168-20564187 | None:intergenic | 45.0% |
| !! | TACTTCTTCCAGTGCTGACA+TGG | - | chr7_2:20564168-20564187 | None:intergenic | 45.0% |
| GTTCGGGAAATATTTGGACG+AGG | + | chr7_2:20564814-20564833 | Msa1052360:intron | 45.0% | |
| TATACAGTCTAACCCACGAC+AGG | - | chr7_2:20565937-20565956 | None:intergenic | 45.0% | |
| ! | AATGATGGAGGTCCCAACAA+AGG | + | chr7_2:20566157-20566176 | Msa1052360:CDS | 45.0% |
| TGCACAACGTAGCCTTTGTT+GGG | - | chr7_2:20566172-20566191 | None:intergenic | 45.0% | |
| ATGCACAACGTAGCCTTTGT+TGG | - | chr7_2:20566173-20566192 | None:intergenic | 45.0% | |
| ! | CATCTTCTTACAGGGAGCAT+TGG | + | chr7_2:20566206-20566225 | Msa1052360:CDS | 45.0% |
| GTTAACTTCCGCTGGATCAA+AGG | + | chr7_2:20566897-20566916 | Msa1052360:intron | 45.0% | |
| CGTGCTAAAAGTAGTAGGCA+AGG | - | chr7_2:20567078-20567097 | None:intergenic | 45.0% | |
| !! | AGAGGTGTCCATGTAGATGT+AGG | + | chr7_2:20567431-20567450 | Msa1052360:three_prime_UTR | 45.0% |
| CACACCTCAGTGTTAAGCAA+GGG | + | chr7_2:20567490-20567509 | Msa1052360:three_prime_UTR | 45.0% | |
| GTCGTCTGATCACAACTGAA+TGG | - | chr7_2:20567621-20567640 | None:intergenic | 45.0% | |
| GATTCCCTGCTATTACAGCA+GGG | - | chr7_2:20567661-20567680 | None:intergenic | 45.0% | |
| TGATTCCCTGCTATTACAGC+AGG | - | chr7_2:20567662-20567681 | None:intergenic | 45.0% | |
| !!! | ATTATATTATATTTTATATG+AGG | - | chr7_2:20565322-20565341 | None:intergenic | 5.0% |
| AGAAACAGCCATGTCAGCAC+TGG | + | chr7_2:20564157-20564176 | Msa1052360:CDS | 50.0% | |
| AGAAGTAGCCATGTCAGCAC+TGG | + | chr7_2:20564181-20564200 | Msa1052360:CDS | 50.0% | |
| TAGTATGACCTGACCTGTCG+TGG | + | chr7_2:20565921-20565940 | Msa1052360:intron | 50.0% | |
| AGTATGACCTGACCTGTCGT+GGG | + | chr7_2:20565922-20565941 | Msa1052360:intron | 50.0% | |
| GAGTGTGAGATAACTTCCGC+TGG | - | chr7_2:20566749-20566768 | None:intergenic | 50.0% | |
| TATGGGCTCCATCCTCAAAG+TGG | - | chr7_2:20567045-20567064 | None:intergenic | 50.0% | |
| TGGCTACGCCTACATCTACA+TGG | - | chr7_2:20567442-20567461 | None:intergenic | 50.0% | |
| CCTTGCTTAACACTGAGGTG+TGG | - | chr7_2:20567492-20567511 | None:intergenic | 50.0% | |
| CCACACCTCAGTGTTAAGCA+AGG | + | chr7_2:20567489-20567508 | Msa1052360:three_prime_UTR | 50.0% | |
| TGGTCCCTTGCTTAACACTG+AGG | - | chr7_2:20567497-20567516 | None:intergenic | 50.0% | |
| TCAGTGTTAAGCAAGGGACC+AGG | + | chr7_2:20567496-20567515 | Msa1052360:three_prime_UTR | 50.0% | |
| AGCACCCTGCTGTAATAGCA+GGG | + | chr7_2:20567654-20567673 | Msa1052360:three_prime_UTR | 50.0% | |
| AGTCTAACCCACGACAGGTC+AGG | - | chr7_2:20565932-20565951 | None:intergenic | 55.0% | |
| AGGCTACGTTGTGCATCCAG+AGG | + | chr7_2:20566177-20566196 | Msa1052360:CDS | 55.0% | |
| CAGCACCCTGCTGTAATAGC+AGG | + | chr7_2:20567653-20567672 | Msa1052360:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 20562520 | 20567755 | 20562520 | ID=Msa1052360;Name=Msa1052360 |
| chr7_2 | mRNA | 20562520 | 20567755 | 20562520 | ID=Msa1052360-mRNA-1;Parent=Msa1052360;Name=Msa1052360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=34|0.75|0.8|1|1|1|5|531|402 |
| chr7_2 | exon | 20562520 | 20562559 | 20562520 | ID=Msa1052360-mRNA-1:exon:4605;Parent=Msa1052360-mRNA-1 |
| chr7_2 | exon | 20562660 | 20562729 | 20562660 | ID=Msa1052360-mRNA-1:exon:4606;Parent=Msa1052360-mRNA-1 |
| chr7_2 | exon | 20563729 | 20564591 | 20563729 | ID=Msa1052360-mRNA-1:exon:4607;Parent=Msa1052360-mRNA-1 |
| chr7_2 | exon | 20566058 | 20566251 | 20566058 | ID=Msa1052360-mRNA-1:exon:4608;Parent=Msa1052360-mRNA-1 |
| chr7_2 | exon | 20567149 | 20567755 | 20567149 | ID=Msa1052360-mRNA-1:exon:4609;Parent=Msa1052360-mRNA-1 |
| chr7_2 | five_prime_UTR | 20562520 | 20562553 | 20562520 | ID=Msa1052360-mRNA-1:five_prime_utr;Parent=Msa1052360-mRNA-1 |
| chr7_2 | CDS | 20562554 | 20562559 | 20562554 | ID=Msa1052360-mRNA-1:cds;Parent=Msa1052360-mRNA-1 |
| chr7_2 | CDS | 20562660 | 20562729 | 20562660 | ID=Msa1052360-mRNA-1:cds;Parent=Msa1052360-mRNA-1 |
| chr7_2 | CDS | 20563729 | 20564591 | 20563729 | ID=Msa1052360-mRNA-1:cds;Parent=Msa1052360-mRNA-1 |
| chr7_2 | CDS | 20566058 | 20566251 | 20566058 | ID=Msa1052360-mRNA-1:cds;Parent=Msa1052360-mRNA-1 |
| chr7_2 | CDS | 20567149 | 20567224 | 20567149 | ID=Msa1052360-mRNA-1:cds;Parent=Msa1052360-mRNA-1 |
| chr7_2 | three_prime_UTR | 20567225 | 20567755 | 20567225 | ID=Msa1052360-mRNA-1:three_prime_utr;Parent=Msa1052360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
