Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519190 | XP_003603229.1 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519190 | sp|Q7MPY0|BIOH_VIBVY | 28.519 | 270 | 165 | 10 | 36 | 297 | 3 | 252 | 1.58e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519190 | G7J939 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0519190 | -0.808654 | 2.784917e-50 | -8.615850e-47 |
| Msa0032610 | Msa0519190 | 0.805028 | 1.626465e-49 | -8.615850e-47 |
| Msa0038020 | Msa0519190 | 0.813575 | 2.388269e-51 | -8.615850e-47 |
| Msa0043730 | Msa0519190 | 0.823154 | 1.614009e-53 | -8.615850e-47 |
| Msa0078610 | Msa0519190 | 0.814272 | 1.676501e-51 | -8.615850e-47 |
| Msa0085720 | Msa0519190 | 0.807485 | 4.939222e-50 | -8.615850e-47 |
| Msa0092990 | Msa0519190 | 0.805243 | 1.466211e-49 | -8.615850e-47 |
| Msa0099510 | Msa0519190 | 0.804552 | 2.044873e-49 | -8.615850e-47 |
| Msa0148120 | Msa0519190 | 0.831882 | 1.297465e-55 | -8.615850e-47 |
| Msa0172780 | Msa0519190 | 0.803318 | 3.691957e-49 | -8.615850e-47 |
| Msa0199800 | Msa0519190 | -0.811335 | 7.371367e-51 | -8.615850e-47 |
| Msa0206620 | Msa0519190 | 0.802662 | 5.043292e-49 | -8.615850e-47 |
| Msa0365490 | Msa0519190 | 0.804754 | 1.856078e-49 | -8.615850e-47 |
| Msa0377530 | Msa0519190 | 0.809547 | 1.792849e-50 | -8.615850e-47 |
| Msa0382130 | Msa0519190 | 0.895011 | 1.436930e-75 | -8.615850e-47 |
| Msa0388030 | Msa0519190 | -0.823286 | 1.502745e-53 | -8.615850e-47 |
| Msa0389810 | Msa0519190 | 0.835374 | 1.741586e-56 | -8.615850e-47 |
| Msa0464900 | Msa0519190 | 0.806323 | 8.696018e-50 | -8.615850e-47 |
| Msa0468130 | Msa0519190 | 0.849092 | 4.035346e-60 | -8.615850e-47 |
| Msa0473240 | Msa0519190 | 0.821112 | 4.800706e-53 | -8.615850e-47 |
| Msa0261360 | Msa0519190 | 0.816862 | 4.442750e-52 | -8.615850e-47 |
| Msa0268090 | Msa0519190 | 0.838811 | 2.304184e-57 | -8.615850e-47 |
| Msa0269450 | Msa0519190 | 0.810450 | 1.145742e-50 | -8.615850e-47 |
| Msa0303360 | Msa0519190 | 0.806236 | 9.073228e-50 | -8.615850e-47 |
| Msa0312310 | Msa0519190 | 0.805851 | 1.093566e-49 | -8.615850e-47 |
| Msa0340690 | Msa0519190 | 0.803817 | 2.907993e-49 | -8.615850e-47 |
| Msa0340710 | Msa0519190 | 0.809323 | 2.003177e-50 | -8.615850e-47 |
| Msa0344870 | Msa0519190 | 0.902788 | 6.770708e-79 | -8.615850e-47 |
| Msa0351080 | Msa0519190 | 0.800153 | 1.647336e-48 | -8.615850e-47 |
| Msa0489610 | Msa0519190 | 0.801336 | 9.447518e-49 | -8.615850e-47 |
| Msa0505060 | Msa0519190 | 0.824801 | 6.627727e-54 | -8.615850e-47 |
| Msa0517490 | Msa0519190 | 0.826763 | 2.269085e-54 | -8.615850e-47 |
| Msa0519190 | Msa0526410 | 0.812957 | 3.263865e-51 | -8.615850e-47 |
| Msa0519190 | Msa0532540 | 0.806016 | 1.009306e-49 | -8.615850e-47 |
| Msa0519190 | Msa0553460 | 0.814565 | 1.444147e-51 | -8.615850e-47 |
| Msa0519190 | Msa0587190 | 0.801892 | 7.265328e-49 | -8.615850e-47 |
| Msa0519190 | Msa0589390 | 0.805221 | 1.482326e-49 | -8.615850e-47 |
| Msa0519190 | Msa0647830 | 0.814403 | 1.567931e-51 | -8.615850e-47 |
| Msa0519190 | Msa0654010 | 0.807552 | 4.780891e-50 | -8.615850e-47 |
| Msa0519190 | Msa0662650 | 0.808519 | 2.975709e-50 | -8.615850e-47 |
| Msa0519190 | Msa0664970 | 0.803552 | 3.301277e-49 | -8.615850e-47 |
| Msa0519190 | Msa0679550 | 0.816198 | 6.258862e-52 | -8.615850e-47 |
| Msa0519190 | Msa0708860 | 0.804457 | 2.140585e-49 | -8.615850e-47 |
| Msa0519190 | Msa0735160 | 0.807115 | 5.916412e-50 | -8.615850e-47 |
| Msa0519190 | Msa0791820 | 0.821093 | 4.848777e-53 | -8.615850e-47 |
| Msa0519190 | Msa0860410 | 0.801784 | 7.646525e-49 | -8.615850e-47 |
| Msa0519190 | Msa0864470 | -0.801893 | 7.262736e-49 | -8.615850e-47 |
| Msa0519190 | Msa0876360 | 0.819589 | 1.072937e-52 | -8.615850e-47 |
| Msa0519190 | Msa0901320 | 0.836593 | 8.546532e-57 | -8.615850e-47 |
| Msa0519190 | Msa0935850 | 0.827579 | 1.446928e-54 | -8.615850e-47 |
| Msa0519190 | Msa0978700 | 0.815586 | 8.568724e-52 | -8.615850e-47 |
| Msa0519190 | Msa0982270 | 0.834845 | 2.367927e-56 | -8.615850e-47 |
| Msa0519190 | Msa1012830 | 0.804401 | 2.199204e-49 | -8.615850e-47 |
| Msa0519190 | Msa1021510 | 0.828604 | 8.197729e-55 | -8.615850e-47 |
| Msa0519190 | Msa1039880 | 0.819255 | 1.278472e-52 | -8.615850e-47 |
| Msa0519190 | Msa1047720 | 0.822817 | 1.933524e-53 | -8.615850e-47 |
| Msa0519190 | Msa1077670 | 0.814637 | 1.391959e-51 | -8.615850e-47 |
| Msa0519190 | Msa1085920 | 0.829666 | 4.531668e-55 | -8.615850e-47 |
| Msa0519190 | Msa1105500 | 0.824128 | 9.546938e-54 | -8.615850e-47 |
| Msa0519190 | Msa1114350 | -0.806386 | 8.436847e-50 | -8.615850e-47 |
| Msa0519190 | Msa1171800 | 0.836577 | 8.625817e-57 | -8.615850e-47 |
| Msa0519190 | Msa1207460 | -0.800005 | 1.765504e-48 | -8.615850e-47 |
| Msa0519190 | Msa1219810 | 0.824258 | 8.897001e-54 | -8.615850e-47 |
| Msa0519190 | Msa1258370 | 0.800026 | 1.747903e-48 | -8.615850e-47 |
| Msa0519190 | Msa1267060 | 0.804431 | 2.167932e-49 | -8.615850e-47 |
| Msa0519190 | Msa1279210 | 0.817593 | 3.042612e-52 | -8.615850e-47 |
| Msa0519190 | Msa1306360 | 0.803311 | 3.703936e-49 | -8.615850e-47 |
| Msa0519190 | Msa1307740 | 0.839217 | 1.808239e-57 | -8.615850e-47 |
| Msa0519190 | Msa1314770 | 0.806519 | 7.907249e-50 | -8.615850e-47 |
| Msa0519190 | Msa1435400 | 0.826400 | 2.770127e-54 | -8.615850e-47 |
| Msa0519190 | Msa1451620 | -0.813249 | 2.816911e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519190 | MtrunA17_Chr3g0136411 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Msa0519190 | MtrunA17_Chr3g0123881 | 39.322 | 295 | 176 | 3 | 5 | 298 | 6 | 298 | 4.43e-75 | 233 |
| Msa0519190 | MtrunA17_Chr5g0426241 | 38.754 | 289 | 172 | 4 | 13 | 298 | 12 | 298 | 3.84e-69 | 217 |
| Msa0519190 | MtrunA17_Chr2g0279171 | 39.661 | 295 | 174 | 4 | 6 | 298 | 9 | 301 | 9.40e-69 | 216 |
| Msa0519190 | MtrunA17_Chr5g0404141 | 38.194 | 288 | 162 | 5 | 23 | 298 | 19 | 302 | 2.18e-62 | 200 |
| Msa0519190 | MtrunA17_Chr8g0373201 | 37.801 | 291 | 162 | 5 | 23 | 298 | 19 | 305 | 4.09e-62 | 199 |
| Msa0519190 | MtrunA17_Chr5g0404211 | 38.043 | 276 | 161 | 5 | 30 | 299 | 26 | 297 | 4.45e-60 | 194 |
| Msa0519190 | MtrunA17_Chr5g0404161 | 36.683 | 199 | 112 | 4 | 23 | 209 | 29 | 225 | 5.05e-34 | 124 |
| Msa0519190 | MtrunA17_Chr8g0382001 | 40.541 | 148 | 80 | 1 | 6 | 153 | 5 | 144 | 8.56e-32 | 115 |
| Msa0519190 | MtrunA17_Chr8g0381981 | 29.054 | 148 | 87 | 3 | 168 | 298 | 10 | 156 | 9.31e-16 | 73.9 |
| Msa0519190 | MtrunA17_Chr5g0404171 | 40.476 | 84 | 49 | 1 | 215 | 298 | 4 | 86 | 8.54e-14 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519190 | AT5G21950.1 | 51.307 | 306 | 144 | 2 | 1 | 302 | 1 | 305 | 1.59e-116 | 338 |
| Msa0519190 | AT5G21950.6 | 51.307 | 306 | 144 | 2 | 1 | 302 | 53 | 357 | 1.23e-115 | 338 |
| Msa0519190 | AT4G33180.1 | 51.316 | 304 | 141 | 4 | 2 | 299 | 3 | 305 | 1.41e-110 | 323 |
| Msa0519190 | AT5G21950.7 | 52.239 | 268 | 123 | 2 | 1 | 264 | 1 | 267 | 2.89e-102 | 300 |
| Msa0519190 | AT5G21950.3 | 50.704 | 213 | 100 | 2 | 1 | 209 | 1 | 212 | 6.01e-73 | 224 |
| Msa0519190 | AT5G21950.2 | 50.704 | 213 | 100 | 2 | 1 | 209 | 1 | 212 | 6.01e-73 | 224 |
| Msa0519190 | AT5G21950.5 | 50.704 | 213 | 100 | 2 | 1 | 209 | 53 | 264 | 4.11e-72 | 224 |
| Msa0519190 | AT5G21950.4 | 50.704 | 213 | 100 | 2 | 1 | 209 | 53 | 264 | 4.11e-72 | 224 |
| Msa0519190 | AT4G33180.2 | 51.500 | 200 | 91 | 3 | 2 | 196 | 3 | 201 | 1.15e-69 | 216 |
| Msa0519190 | AT5G09430.1 | 36.120 | 299 | 183 | 4 | 6 | 298 | 11 | 307 | 2.06e-65 | 208 |
| Msa0519190 | AT4G39955.1 | 35.786 | 299 | 188 | 4 | 2 | 298 | 1 | 297 | 9.50e-64 | 204 |
| Msa0519190 | AT1G78210.1 | 37.544 | 285 | 170 | 6 | 20 | 298 | 19 | 301 | 7.11e-60 | 194 |
| Msa0519190 | AT1G72620.1 | 36.900 | 271 | 162 | 6 | 33 | 298 | 65 | 331 | 1.39e-56 | 186 |
| Msa0519190 | AT1G17430.1 | 35.333 | 300 | 176 | 9 | 7 | 298 | 40 | 329 | 5.58e-55 | 182 |
| Msa0519190 | AT2G18360.1 | 34.628 | 309 | 182 | 6 | 6 | 298 | 2 | 306 | 3.97e-53 | 176 |
| Msa0519190 | AT4G36610.1 | 34.247 | 292 | 170 | 6 | 23 | 298 | 19 | 304 | 1.30e-48 | 165 |
| Msa0519190 | AT2G18360.2 | 34.909 | 275 | 159 | 6 | 6 | 264 | 2 | 272 | 7.65e-46 | 156 |
Find 74 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCGGTTGTAAGAAATTT+AGG | 0.175192 | 3_4:+71161072 | None:intergenic |
| GATGATGATTAGTTAATTAT+TGG | 0.190298 | 3_4:+71163765 | None:intergenic |
| GAAGAAACGTACAGTGTTTA+TGG | 0.201566 | 3_4:+71163819 | None:intergenic |
| TGGAATAGTTGCGTATAATT+TGG | 0.256443 | 3_4:-71163359 | Msa0519190:CDS |
| GTTCCCGATCTAATCTTCTT+TGG | 0.272608 | 3_4:-71163496 | Msa0519190:CDS |
| TTGCAGGGTAATAAGTAAAA+AGG | 0.295321 | 3_4:-71161168 | Msa0519190:intron |
| AGAGATTATACTCAGATAAT+AGG | 0.333887 | 3_4:-71162981 | Msa0519190:CDS |
| AAAGTAGTTATTGCAAGTTC+TGG | 0.338855 | 3_4:-71163307 | Msa0519190:CDS |
| GAAAAGATGGAGCTTCTAAA+TGG | 0.345980 | 3_4:-71162955 | Msa0519190:CDS |
| TTTCTTGAGGGACTTCTTAA+GGG | 0.369669 | 3_4:-71163134 | Msa0519190:intron |
| GGCAAGATTGGAATTGATAA+AGG | 0.387643 | 3_4:-71161147 | Msa0519190:CDS |
| AAACATTTCACCTCTTCAAC+AGG | 0.392798 | 3_4:-71162905 | Msa0519190:intron |
| GGAAAATTGTTGGAGAAGAT+AGG | 0.395031 | 3_4:-71163418 | Msa0519190:CDS |
| TATAATTTGGCGAAGATGTT+GGG | 0.398616 | 3_4:-71163346 | Msa0519190:CDS |
| CTCGTCCTCATCCACGGTTT+CGG | 0.400394 | 3_4:-71163583 | Msa0519190:CDS |
| ATACATACTCCTTCAATTCA+TGG | 0.401600 | 3_4:+71162752 | None:intergenic |
| CTTCTAAATGGATTGTCTAT+AGG | 0.430621 | 3_4:-71162943 | Msa0519190:CDS |
| TACCTCCGCCGTTGTTTCAC+CGG | 0.432558 | 3_4:-71163697 | Msa0519190:CDS |
| ATAATATTGTTGAATTCCTC+CGG | 0.432661 | 3_4:+71161095 | None:intergenic |
| CGCCGTTGTTTCACCGGCGC+CGG | 0.436167 | 3_4:-71163691 | Msa0519190:CDS |
| TTCAACTGTTGAGGAGAAGA+AGG | 0.453370 | 3_4:+71163208 | None:intergenic |
| ATTATTGGATCATGACGATT+GGG | 0.458499 | 3_4:+71163780 | None:intergenic |
| GGAATCAGTTGGAAAATTGT+TGG | 0.459337 | 3_4:-71163428 | Msa0519190:CDS |
| TCCAGGAAGTTCTCGTATTG+TGG | 0.474193 | 3_4:-71162810 | Msa0519190:intron |
| GTCCTATGGCGATGTGGCAA+TGG | 0.477842 | 3_4:-71163561 | Msa0519190:CDS |
| TGTTTATGGATGGATGAGTC+AGG | 0.483061 | 3_4:+71163833 | None:intergenic |
| AATTATTGGATCATGACGAT+TGG | 0.484999 | 3_4:+71163779 | None:intergenic |
| AATTCATGGGCCATCTGCAC+GGG | 0.491317 | 3_4:+71162766 | None:intergenic |
| AAATGGATTGTCTATAGGAC+AGG | 0.491723 | 3_4:-71162938 | Msa0519190:CDS |
| CATCCACGGTTTCGGTCCTA+TGG | 0.493553 | 3_4:-71163575 | Msa0519190:CDS |
| GCAGATGGCCCATGAATTGA+AGG | 0.496257 | 3_4:-71162761 | Msa0519190:CDS |
| GTGGCGTTGTTGAAAAGAGC+TGG | 0.502078 | 3_4:-71163259 | Msa0519190:CDS |
| TTGAGATAAGAGACCGGCGC+CGG | 0.505406 | 3_4:+71163678 | None:intergenic |
| CATTTAGTTACCTGTTGAAG+AGG | 0.505749 | 3_4:+71162895 | None:intergenic |
| CCATCGTTTCTTAGTTTCGC+CGG | 0.509953 | 3_4:-71163733 | Msa0519190:CDS |
| AGATAATAGGAAGGAAAAGA+TGG | 0.510309 | 3_4:-71162968 | Msa0519190:CDS |
| GTATAATTTGGCGAAGATGT+TGG | 0.512839 | 3_4:-71163347 | Msa0519190:CDS |
| CCAGGAAGTTCTCGTATTGT+GGG | 0.514777 | 3_4:-71162809 | Msa0519190:intron |
| CAATATATTTCCCGTGCAGA+TGG | 0.516669 | 3_4:-71162776 | Msa0519190:CDS |
| AGTTTCGCCGGCTTATACAA+CGG | 0.520083 | 3_4:-71163721 | Msa0519190:CDS |
| CACGTGGTGGGAACGAGTTA+TGG | 0.520296 | 3_4:-71163382 | Msa0519190:CDS |
| CGCCGGTGAAACAACGGCGG+AGG | 0.521427 | 3_4:+71163695 | None:intergenic |
| TCTCCAAAGAAGATTAGATC+GGG | 0.527590 | 3_4:+71163493 | None:intergenic |
| AAATTTCAAGCGGAATCAGT+TGG | 0.532529 | 3_4:-71163439 | Msa0519190:CDS |
| TTCTCCAAAGAAGATTAGAT+CGG | 0.537749 | 3_4:+71163492 | None:intergenic |
| TGTGCCACAAATTGAAAAGC+CGG | 0.542764 | 3_4:-71161114 | Msa0519190:CDS |
| GTTGTTGAAAAGAGCTGGAT+TGG | 0.546954 | 3_4:-71163254 | Msa0519190:CDS |
| AGAGGTTGAAGTGTGGAGCT+AGG | 0.550512 | 3_4:+71163521 | None:intergenic |
| TACATACTCCTTCAATTCAT+GGG | 0.553495 | 3_4:+71162753 | None:intergenic |
| TAGGACCGAAACCGTGGATG+AGG | 0.554881 | 3_4:+71163578 | None:intergenic |
| CAATTCATGGGCCATCTGCA+CGG | 0.558178 | 3_4:+71162765 | None:intergenic |
| CCGTGGATGAGGACGAGAGA+AGG | 0.567087 | 3_4:+71163589 | None:intergenic |
| CCTTCTCTCGTCCTCATCCA+CGG | 0.567621 | 3_4:-71163589 | Msa0519190:CDS |
| CGCCATTGCCACATCGCCAT+AGG | 0.577637 | 3_4:+71163559 | None:intergenic |
| AAACGTACAGTGTTTATGGA+TGG | 0.585904 | 3_4:+71163823 | None:intergenic |
| GACCGGCGCCGGTGAAACAA+CGG | 0.598385 | 3_4:+71163689 | None:intergenic |
| ATTGGATCATGACGATTGGG+TGG | 0.605843 | 3_4:+71163783 | None:intergenic |
| ATTATACTCAGATAATAGGA+AGG | 0.616496 | 3_4:-71162977 | Msa0519190:CDS |
| GAGGTAGCCGTTGTATAAGC+CGG | 0.623456 | 3_4:+71163714 | None:intergenic |
| CAGGAAGTTCTCGTATTGTG+GGG | 0.624648 | 3_4:-71162808 | Msa0519190:CDS |
| AGGAAGTTCTCGTATTGTGG+GGG | 0.630670 | 3_4:-71162807 | Msa0519190:CDS |
| AAGAACAGAGAAATTTCAAG+CGG | 0.633582 | 3_4:-71163449 | Msa0519190:CDS |
| GTTTCGGTCCTATGGCGATG+TGG | 0.638713 | 3_4:-71163567 | Msa0519190:CDS |
| CCGGCGAAACTAAGAAACGA+TGG | 0.642487 | 3_4:+71163733 | None:intergenic |
| AAGATTGGAATTGATAAAGG+AGG | 0.650039 | 3_4:-71161144 | Msa0519190:CDS |
| GTGGTGGGAACGAGTTATGG+TGG | 0.651158 | 3_4:-71163379 | Msa0519190:CDS |
| TCGCCATAGGACCGAAACCG+TGG | 0.671124 | 3_4:+71163572 | None:intergenic |
| AGATTAGATCGGGAACGTAG+AGG | 0.675856 | 3_4:+71163503 | None:intergenic |
| GGAAGTTCTCGTATTGTGGG+GGG | 0.676838 | 3_4:-71162806 | Msa0519190:CDS |
| GGAACGTAGAGGTTGAAGTG+TGG | 0.688244 | 3_4:+71163514 | None:intergenic |
| CATAACTCGTTCCCACCACG+TGG | 0.694739 | 3_4:+71163383 | None:intergenic |
| GCCACAAATTGAAAAGCCGG+AGG | 0.697095 | 3_4:-71161111 | Msa0519190:CDS |
| CGGCGCCGGTGAAACAACGG+CGG | 0.720587 | 3_4:+71163692 | None:intergenic |
| TATGACAAAGAATCATAACG+TGG | 0.759539 | 3_4:-71163278 | Msa0519190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTCTCAAATATTTTAA+TGG | - | chr3_4:71162888-71162907 | Msa0519190:intron | 10.0% |
| !!! | TGTAATTTTCTTAAAAAAAA+GGG | + | chr3_4:71163393-71163412 | None:intergenic | 10.0% |
| !!! | TTGTAATTTTCTTAAAAAAA+AGG | + | chr3_4:71163394-71163413 | None:intergenic | 10.0% |
| !! | ACTTATAATAAGTTCATAAT+GGG | - | chr3_4:71162188-71162207 | Msa0519190:intron | 15.0% |
| !!! | TAAAATTAGTTTATAACCTA+TGG | + | chr3_4:71162328-71162347 | None:intergenic | 15.0% |
| !! | TGAATGAAATTCAATAATAA+GGG | + | chr3_4:71162542-71162561 | None:intergenic | 15.0% |
| !! | TTGAATGAAATTCAATAATA+AGG | + | chr3_4:71162543-71162562 | None:intergenic | 15.0% |
| !! | CATTTAATAAATAATGTATG+TGG | - | chr3_4:71162756-71162775 | Msa0519190:intron | 15.0% |
| !! | AACTCTAAACTTTAATATAT+GGG | + | chr3_4:71163080-71163099 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATTTTGTTTGAG+AGG | - | chr3_4:71163588-71163607 | Msa0519190:CDS | 15.0% |
| !! | AGAAAAAAAAATCAAGATTT+CGG | + | chr3_4:71163791-71163810 | None:intergenic | 15.0% |
| !!! | TTGTTTTAGTTTGTTTTGTT+GGG | + | chr3_4:71160989-71161008 | None:intergenic | 20.0% |
| !!! | TTTGTTTTAGTTTGTTTTGT+TGG | + | chr3_4:71160990-71161009 | None:intergenic | 20.0% |
| !!! | GATGATGATTAGTTAATTAT+TGG | + | chr3_4:71161082-71161101 | None:intergenic | 20.0% |
| !!! | ACACATTTAATTTACTTGTA+CGG | + | chr3_4:71161980-71161999 | None:intergenic | 20.0% |
| !! | CACTTATAATAAGTTCATAA+TGG | - | chr3_4:71162187-71162206 | Msa0519190:intron | 20.0% |
| !!! | TCTAGTATTCCAATTTTATT+GGG | + | chr3_4:71162279-71162298 | None:intergenic | 20.0% |
| !!! | ATCTAGTATTCCAATTTTAT+TGG | + | chr3_4:71162280-71162299 | None:intergenic | 20.0% |
| !!! | ATTCAATAATAAGGGTATAA+TGG | + | chr3_4:71162534-71162553 | None:intergenic | 20.0% |
| !! | CATTCAATAAATGATGTATA+TGG | + | chr3_4:71162795-71162814 | None:intergenic | 20.0% |
| !! | GAACTCTAAACTTTAATATA+TGG | + | chr3_4:71163081-71163100 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTTCAACTGTTG+AGG | + | chr3_4:71161648-71161667 | None:intergenic | 25.0% |
| ! | AGAAAAAATTAGGCACAAAA+GGG | + | chr3_4:71161695-71161714 | None:intergenic | 25.0% |
| ! | AAGAAAAAATTAGGCACAAA+AGG | + | chr3_4:71161696-71161715 | None:intergenic | 25.0% |
| ! | AGAGATTATACTCAGATAAT+AGG | - | chr3_4:71161863-71161882 | Msa0519190:intron | 25.0% |
| ! | ATTATACTCAGATAATAGGA+AGG | - | chr3_4:71161867-71161886 | Msa0519190:intron | 25.0% |
| ! | ACAAAATATTATGCAGGATT+TGG | + | chr3_4:71162118-71162137 | None:intergenic | 25.0% |
| ! | AAGTGTATCTATATGTTACT+AGG | + | chr3_4:71162172-71162191 | None:intergenic | 25.0% |
| ! | ATATAAGATTGATTGATTGG+TGG | - | chr3_4:71162211-71162230 | Msa0519190:intron | 25.0% |
| ! | ATAACCTATGGATGATATTT+GGG | + | chr3_4:71162316-71162335 | None:intergenic | 25.0% |
| ! | TATAACCTATGGATGATATT+TGG | + | chr3_4:71162317-71162336 | None:intergenic | 25.0% |
| ! | ATAACCTATGGATGATATTT+GGG | + | chr3_4:71162316-71162335 | None:intergenic | 25.0% |
| ! | TATAACCTATGGATGATATT+TGG | + | chr3_4:71162317-71162336 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr3_4:71162572-71162591 | Msa0519190:intron | 25.0% |
| ! | TCCTTATTAATTGTAGTTAG+TGG | + | chr3_4:71162576-71162595 | None:intergenic | 25.0% |
| ! | AATATATGGGAAATGTTAAC+CGG | + | chr3_4:71163067-71163086 | None:intergenic | 25.0% |
| !!! | TCTTACATTTGATTTGATGA+TGG | - | chr3_4:71163197-71163216 | Msa0519190:CDS | 25.0% |
| ! | TTCACTATGTTAGGAATTTA+CGG | - | chr3_4:71163270-71163289 | Msa0519190:CDS | 25.0% |
| ! | ACATTTCAATAAACCCATTT+CGG | + | chr3_4:71163503-71163522 | None:intergenic | 25.0% |
| ! | CTTCTTATTAACTTATTGCA+GGG | - | chr3_4:71163661-71163680 | Msa0519190:CDS | 25.0% |
| ! | AATAAGTAAAAAGGCAAGAT+TGG | - | chr3_4:71163685-71163704 | Msa0519190:CDS | 25.0% |
| ! | ATAATATTGTTGAATTCCTC+CGG | + | chr3_4:71163752-71163771 | None:intergenic | 25.0% |
| ! | ATTTCGGTTGTAAGAAATTT+AGG | + | chr3_4:71163775-71163794 | None:intergenic | 25.0% |
| ATTATTGGATCATGACGATT+GGG | + | chr3_4:71161067-71161086 | None:intergenic | 30.0% | |
| AATTATTGGATCATGACGAT+TGG | + | chr3_4:71161068-71161087 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGAGATAAGAGAC+CGG | + | chr3_4:71161175-71161194 | None:intergenic | 30.0% |
| !! | TTTTGTGTGGATTTGTTTGT+TGG | + | chr3_4:71161234-71161253 | None:intergenic | 30.0% |
| TTCTCCAAAGAAGATTAGAT+CGG | + | chr3_4:71161355-71161374 | None:intergenic | 30.0% | |
| AAGAACAGAGAAATTTCAAG+CGG | - | chr3_4:71161395-71161414 | Msa0519190:intron | 30.0% | |
| TGGAATAGTTGCGTATAATT+TGG | - | chr3_4:71161485-71161504 | Msa0519190:intron | 30.0% | |
| TATAATTTGGCGAAGATGTT+GGG | - | chr3_4:71161498-71161517 | Msa0519190:intron | 30.0% | |
| AAAGTAGTTATTGCAAGTTC+TGG | - | chr3_4:71161537-71161556 | Msa0519190:intron | 30.0% | |
| TATGACAAAGAATCATAACG+TGG | - | chr3_4:71161566-71161585 | Msa0519190:intron | 30.0% | |
| !!! | TTGTGCCTAATTTTTTCTTG+AGG | - | chr3_4:71161697-71161716 | Msa0519190:intron | 30.0% |
| !!! | TGTGCCTAATTTTTTCTTGA+GGG | - | chr3_4:71161698-71161717 | Msa0519190:intron | 30.0% |
| AAGTCCCTCAAGAAAAAATT+AGG | + | chr3_4:71161705-71161724 | None:intergenic | 30.0% | |
| AGATAATAGGAAGGAAAAGA+TGG | - | chr3_4:71161876-71161895 | Msa0519190:intron | 30.0% | |
| !! | CTTCTAAATGGATTGTCTAT+AGG | - | chr3_4:71161901-71161920 | Msa0519190:intron | 30.0% |
| TACATACTCCTTCAATTCAT+GGG | + | chr3_4:71162094-71162113 | None:intergenic | 30.0% | |
| ATACATACTCCTTCAATTCA+TGG | + | chr3_4:71162095-71162114 | None:intergenic | 30.0% | |
| GCAGAAACAAAATATTATGC+AGG | + | chr3_4:71162124-71162143 | None:intergenic | 30.0% | |
| AGCACAAGTGAAAAGAAAAT+TGG | + | chr3_4:71162146-71162165 | None:intergenic | 30.0% | |
| GGGATATAAGATTGATTGAT+TGG | - | chr3_4:71162208-71162227 | Msa0519190:intron | 30.0% | |
| ! | ATTGATTGATTGGTGGTTAT+GGG | - | chr3_4:71162218-71162237 | Msa0519190:intron | 30.0% |
| ATAAGCAGTCCCAATAAAAT+TGG | - | chr3_4:71162267-71162286 | Msa0519190:intron | 30.0% | |
| TAGATCCCAAAATTATCCAA+TGG | - | chr3_4:71162376-71162395 | Msa0519190:intron | 30.0% | |
| ! | TCGATCCATTGGATAATTTT+GGG | + | chr3_4:71162384-71162403 | None:intergenic | 30.0% |
| ! | ATCGATCCATTGGATAATTT+TGG | + | chr3_4:71162385-71162404 | None:intergenic | 30.0% |
| AAAATTATCCAATGGATCGA+TGG | - | chr3_4:71162384-71162403 | Msa0519190:intron | 30.0% | |
| ! | AGGTTTGTGCACAATTTTTA+AGG | + | chr3_4:71162682-71162701 | None:intergenic | 30.0% |
| ! | AAGTTTCTTACATTTGAGAC+CGG | - | chr3_4:71162830-71162849 | Msa0519190:intron | 30.0% |
| !! | ATTTTAATGGTCATGCTAAC+CGG | - | chr3_4:71162901-71162920 | Msa0519190:intron | 30.0% |
| ! | TTGTTTTCTTAACCAATTCC+TGG | - | chr3_4:71163036-71163055 | Msa0519190:intron | 30.0% |
| TCACTATGTTAGGAATTTAC+GGG | - | chr3_4:71163271-71163290 | Msa0519190:CDS | 30.0% | |
| GTGATGTGAAATTACCAAAA+TGG | - | chr3_4:71163367-71163386 | Msa0519190:CDS | 30.0% | |
| ! | CTTAAAAAAAAGGGCCATTT+TGG | + | chr3_4:71163384-71163403 | None:intergenic | 30.0% |
| ATGGAGGTAGTGAAAAAAAA+AGG | - | chr3_4:71163442-71163461 | Msa0519190:CDS | 30.0% | |
| TGGAGGTAGTGAAAAAAAAA+GGG | - | chr3_4:71163443-71163462 | Msa0519190:CDS | 30.0% | |
| CCTGCAATAAGTTAATAAGA+AGG | + | chr3_4:71163663-71163682 | None:intergenic | 30.0% | |
| CCTTCTTATTAACTTATTGC+AGG | - | chr3_4:71163660-71163679 | Msa0519190:CDS | 30.0% | |
| TTGCAGGGTAATAAGTAAAA+AGG | - | chr3_4:71163676-71163695 | Msa0519190:CDS | 30.0% | |
| AAGATTGGAATTGATAAAGG+AGG | - | chr3_4:71163700-71163719 | Msa0519190:CDS | 30.0% | |
| !!! | ACGAAGCAATCATTTTTTGA+AGG | + | chr3_4:71163846-71163865 | None:intergenic | 30.0% |
| AAACGTACAGTGTTTATGGA+TGG | + | chr3_4:71161024-71161043 | None:intergenic | 35.0% | |
| GAAGAAACGTACAGTGTTTA+TGG | + | chr3_4:71161028-71161047 | None:intergenic | 35.0% | |
| ! | ACGAAACATCTCTCCATTTT+TGG | - | chr3_4:71161205-71161224 | Msa0519190:intron | 35.0% |
| !! | CGAAACATCTCTCCATTTTT+GGG | - | chr3_4:71161206-71161225 | Msa0519190:intron | 35.0% |
| !! | GAAACATCTCTCCATTTTTG+GGG | - | chr3_4:71161207-71161226 | Msa0519190:intron | 35.0% |
| TCTCCAAAGAAGATTAGATC+GGG | + | chr3_4:71161354-71161373 | None:intergenic | 35.0% | |
| AAATTTCAAGCGGAATCAGT+TGG | - | chr3_4:71161405-71161424 | Msa0519190:intron | 35.0% | |
| GGAATCAGTTGGAAAATTGT+TGG | - | chr3_4:71161416-71161435 | Msa0519190:intron | 35.0% | |
| GGAAAATTGTTGGAGAAGAT+AGG | - | chr3_4:71161426-71161445 | Msa0519190:intron | 35.0% | |
| GTATAATTTGGCGAAGATGT+TGG | - | chr3_4:71161497-71161516 | Msa0519190:intron | 35.0% | |
| ! | TTTTCTTGAGGGACTTCTTA+AGG | - | chr3_4:71161709-71161728 | Msa0519190:intron | 35.0% |
| TTTCTTGAGGGACTTCTTAA+GGG | - | chr3_4:71161710-71161729 | Msa0519190:intron | 35.0% | |
| ACGTAATTTGAACTCTCGTA+TGG | - | chr3_4:71161791-71161810 | Msa0519190:intron | 35.0% | |
| TGAACTCTCGTATGGTAAAA+AGG | - | chr3_4:71161799-71161818 | Msa0519190:intron | 35.0% | |
| GAACTCTCGTATGGTAAAAA+GGG | - | chr3_4:71161800-71161819 | Msa0519190:intron | 35.0% | |
| TCGTATGGTAAAAAGGGAAA+GGG | - | chr3_4:71161806-71161825 | Msa0519190:intron | 35.0% | |
| GAAAAGATGGAGCTTCTAAA+TGG | - | chr3_4:71161889-71161908 | Msa0519190:intron | 35.0% | |
| !! | AAATGGATTGTCTATAGGAC+AGG | - | chr3_4:71161906-71161925 | Msa0519190:intron | 35.0% |
| AAACATTTCACCTCTTCAAC+AGG | - | chr3_4:71161939-71161958 | Msa0519190:intron | 35.0% | |
| CATTTAGTTACCTGTTGAAG+AGG | + | chr3_4:71161952-71161971 | None:intergenic | 35.0% | |
| ATTTCGCATTACTCATATCC+AGG | - | chr3_4:71162017-71162036 | Msa0519190:intron | 35.0% | |
| ! | GATTGATTGATTGGTGGTTA+TGG | - | chr3_4:71162217-71162236 | Msa0519190:intron | 35.0% |
| TCAATTTCATGGCCAAAGTA+GGG | + | chr3_4:71162248-71162267 | None:intergenic | 35.0% | |
| ATCAATTTCATGGCCAAAGT+AGG | + | chr3_4:71162249-71162268 | None:intergenic | 35.0% | |
| TTAGCCCAAATATCATCCAT+AGG | - | chr3_4:71162309-71162328 | Msa0519190:intron | 35.0% | |
| TTAGCCCAAATATCATCCAT+AGG | - | chr3_4:71162309-71162328 | Msa0519190:intron | 35.0% | |
| ! | GGGATCTAGTTTATAACCTA+TGG | + | chr3_4:71162364-71162383 | None:intergenic | 35.0% |
| ! | TTCTTACATTTGAGACCTGA+GGG | + | chr3_4:71162717-71162736 | None:intergenic | 35.0% |
| ! | TTTCTTACATTTGAGACCTG+AGG | + | chr3_4:71162718-71162737 | None:intergenic | 35.0% |
| TCTCAAAATAATACTCCCTC+CGG | + | chr3_4:71162852-71162871 | None:intergenic | 35.0% | |
| GACTTCTTTAACCAGAATCA+TGG | + | chr3_4:71162930-71162949 | None:intergenic | 35.0% | |
| ! | GATAAGTTGACATCATTACG+TGG | - | chr3_4:71163102-71163121 | Msa0519190:intron | 35.0% |
| TCATCCTCATCATAACCTAT+GGG | + | chr3_4:71163147-71163166 | None:intergenic | 35.0% | |
| ATCATCCTCATCATAACCTA+TGG | + | chr3_4:71163148-71163167 | None:intergenic | 35.0% | |
| ! | GATTTTTGCTCTTTGCTCTT+TGG | - | chr3_4:71163222-71163241 | Msa0519190:CDS | 35.0% |
| CATGTATGCTTCACTATGTT+AGG | - | chr3_4:71163261-71163280 | Msa0519190:CDS | 35.0% | |
| AGATGAAAGAACACATGGAA+GGG | - | chr3_4:71163326-71163345 | Msa0519190:CDS | 35.0% | |
| TTTCAATAAACCCATTTCGG+CGG | + | chr3_4:71163500-71163519 | None:intergenic | 35.0% | |
| GGCAAGATTGGAATTGATAA+AGG | - | chr3_4:71163697-71163716 | Msa0519190:CDS | 35.0% | |
| TGTTTATGGATGGATGAGTC+AGG | + | chr3_4:71161014-71161033 | None:intergenic | 40.0% | |
| ! | TGTTTGTTGGACCCCAAAAA+TGG | + | chr3_4:71161221-71161240 | None:intergenic | 40.0% |
| GTTCCCGATCTAATCTTCTT+TGG | - | chr3_4:71161348-71161367 | Msa0519190:intron | 40.0% | |
| GTTGTTGAAAAGAGCTGGAT+TGG | - | chr3_4:71161590-71161609 | Msa0519190:intron | 40.0% | |
| TTCAACTGTTGAGGAGAAGA+AGG | + | chr3_4:71161639-71161658 | None:intergenic | 40.0% | |
| CTCGTATGGTAAAAAGGGAA+AGG | - | chr3_4:71161805-71161824 | Msa0519190:intron | 40.0% | |
| CAATATATTTCCCGTGCAGA+TGG | - | chr3_4:71162068-71162087 | Msa0519190:intron | 40.0% | |
| GTTATGGGTTTACCCTACTT+TGG | - | chr3_4:71162233-71162252 | Msa0519190:intron | 40.0% | |
| GGGACTGCTTATCAATTTCA+TGG | + | chr3_4:71162259-71162278 | None:intergenic | 40.0% | |
| ATGAAATGCCATCGATCCAT+TGG | + | chr3_4:71162395-71162414 | None:intergenic | 40.0% | |
| !!! | AGACGCTTATTTTGAGACGA+AGG | + | chr3_4:71162436-71162455 | None:intergenic | 40.0% |
| ! | TTTCTTACATTTGAGACCGG+AGG | - | chr3_4:71162833-71162852 | Msa0519190:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | - | chr3_4:71162834-71162853 | Msa0519190:intron | 40.0% |
| TTAACCAGAATCATGGACAC+CGG | + | chr3_4:71162923-71162942 | None:intergenic | 40.0% | |
| TAACCAATTCCTGGAAACAC+CGG | - | chr3_4:71163045-71163064 | Msa0519190:intron | 40.0% | |
| AAATGTTAACCGGTGTTTCC+AGG | + | chr3_4:71163057-71163076 | None:intergenic | 40.0% | |
| CATCCTCATCATAACCTATG+GGG | + | chr3_4:71163146-71163165 | None:intergenic | 40.0% | |
| AAAGAGAGAACTGAGGGAAT+AGG | - | chr3_4:71163298-71163317 | Msa0519190:CDS | 40.0% | |
| AAGAGAGAACTGAGGGAATA+GGG | - | chr3_4:71163299-71163318 | Msa0519190:CDS | 40.0% | |
| GAGAGAGATGAAAGAACACA+TGG | - | chr3_4:71163321-71163340 | Msa0519190:CDS | 40.0% | |
| GAGATGAAAGAACACATGGA+AGG | - | chr3_4:71163325-71163344 | Msa0519190:CDS | 40.0% | |
| TACAAAACAGCCATCCACAT+TGG | - | chr3_4:71163409-71163428 | Msa0519190:CDS | 40.0% | |
| TGTGCCACAAATTGAAAAGC+CGG | - | chr3_4:71163730-71163749 | Msa0519190:CDS | 40.0% | |
| ATTGGATCATGACGATTGGG+TGG | + | chr3_4:71161064-71161083 | None:intergenic | 45.0% | |
| CCATCGTTTCTTAGTTTCGC+CGG | - | chr3_4:71161111-71161130 | Msa0519190:CDS | 45.0% | |
| !! | AGTTTCGCCGGCTTATACAA+CGG | - | chr3_4:71161123-71161142 | Msa0519190:CDS | 45.0% |
| ! | GACGAGAGAAGGTTTTTGTG+TGG | + | chr3_4:71161247-71161266 | None:intergenic | 45.0% |
| AGATTAGATCGGGAACGTAG+AGG | + | chr3_4:71161344-71161363 | None:intergenic | 45.0% | |
| TCCAGGAAGTTCTCGTATTG+TGG | - | chr3_4:71162034-71162053 | Msa0519190:intron | 45.0% | |
| CCAGGAAGTTCTCGTATTGT+GGG | - | chr3_4:71162035-71162054 | Msa0519190:intron | 45.0% | |
| CAGGAAGTTCTCGTATTGTG+GGG | - | chr3_4:71162036-71162055 | Msa0519190:intron | 45.0% | |
| AGGAAGTTCTCGTATTGTGG+GGG | - | chr3_4:71162037-71162056 | Msa0519190:intron | 45.0% | |
| TAACCGGTGTTTCCAGGAAT+TGG | + | chr3_4:71163051-71163070 | None:intergenic | 45.0% | |
| ACACCCCATAGGTTATGATG+AGG | - | chr3_4:71163140-71163159 | Msa0519190:CDS | 45.0% | |
| ! | CTCTTTGCTCTTTGGAGACT+TGG | - | chr3_4:71163230-71163249 | Msa0519190:CDS | 45.0% |
| GGAGAGAAAGAGAGAACTGA+GGG | - | chr3_4:71163292-71163311 | Msa0519190:CDS | 45.0% | |
| AGAACACATGGAAGGGTTTG+AGG | - | chr3_4:71163333-71163352 | Msa0519190:CDS | 45.0% | |
| GAACACATGGAAGGGTTTGA+GGG | - | chr3_4:71163334-71163353 | Msa0519190:CDS | 45.0% | |
| CATACACATGCCAATGTGGA+TGG | + | chr3_4:71163422-71163441 | None:intergenic | 45.0% | |
| CCATCATACACATGCCAATG+TGG | + | chr3_4:71163426-71163445 | None:intergenic | 45.0% | |
| CCACATTGGCATGTGTATGA+TGG | - | chr3_4:71163423-71163442 | Msa0519190:CDS | 45.0% | |
| CATTGGCATGTGTATGATGG+AGG | - | chr3_4:71163426-71163445 | Msa0519190:CDS | 45.0% | |
| GCAACTCGTGTAAGTCATGT+GGG | + | chr3_4:71163638-71163657 | None:intergenic | 45.0% | |
| AGCAACTCGTGTAAGTCATG+TGG | + | chr3_4:71163639-71163658 | None:intergenic | 45.0% | |
| ! | TCCTCCGGCTTTTCAATTTG+TGG | + | chr3_4:71163737-71163756 | None:intergenic | 45.0% |
| CCGGCGAAACTAAGAAACGA+TGG | + | chr3_4:71161114-71161133 | None:intergenic | 50.0% | |
| GAGGTAGCCGTTGTATAAGC+CGG | + | chr3_4:71161133-71161152 | None:intergenic | 50.0% | |
| AGAGGTTGAAGTGTGGAGCT+AGG | + | chr3_4:71161326-71161345 | None:intergenic | 50.0% | |
| GGAACGTAGAGGTTGAAGTG+TGG | + | chr3_4:71161333-71161352 | None:intergenic | 50.0% | |
| !! | AGGTGTGAAAAAGTGCCACG+TGG | - | chr3_4:71161446-71161465 | Msa0519190:intron | 50.0% |
| !! | TGTGAAAAAGTGCCACGTGG+TGG | - | chr3_4:71161449-71161468 | Msa0519190:intron | 50.0% |
| !! | GTGAAAAAGTGCCACGTGGT+GGG | - | chr3_4:71161450-71161469 | Msa0519190:intron | 50.0% |
| GTGGCGTTGTTGAAAAGAGC+TGG | - | chr3_4:71161585-71161604 | Msa0519190:intron | 50.0% | |
| CCCACAATACGAGAACTTCC+TGG | + | chr3_4:71162038-71162057 | None:intergenic | 50.0% | |
| GGAAGTTCTCGTATTGTGGG+GGG | - | chr3_4:71162038-71162057 | Msa0519190:intron | 50.0% | |
| AATTCATGGGCCATCTGCAC+GGG | + | chr3_4:71162081-71162100 | None:intergenic | 50.0% | |
| CAATTCATGGGCCATCTGCA+CGG | + | chr3_4:71162082-71162101 | None:intergenic | 50.0% | |
| GCAGATGGCCCATGAATTGA+AGG | - | chr3_4:71162083-71162102 | Msa0519190:intron | 50.0% | |
| CCTGAGGGAGTAGTCGTTTA+AGG | + | chr3_4:71162702-71162721 | None:intergenic | 50.0% | |
| CCTTAAACGACTACTCCCTC+AGG | - | chr3_4:71162699-71162718 | Msa0519190:intron | 50.0% | |
| CTAACCGGTGTCCATGATTC+TGG | - | chr3_4:71162916-71162935 | Msa0519190:CDS | 50.0% | |
| CTCACTCTTCTACACCCCAT+AGG | - | chr3_4:71163129-71163148 | Msa0519190:intron | 50.0% | |
| GGGAGAGAAAGAGAGAACTG+AGG | - | chr3_4:71163291-71163310 | Msa0519190:CDS | 50.0% | |
| AACTGAAACCACCGCCGAAA+TGG | - | chr3_4:71163486-71163505 | Msa0519190:CDS | 50.0% | |
| ACTGAAACCACCGCCGAAAT+GGG | - | chr3_4:71163487-71163506 | Msa0519190:CDS | 50.0% | |
| CAATAAACCCATTTCGGCGG+TGG | + | chr3_4:71163497-71163516 | None:intergenic | 50.0% | |
| TCGTGTAAGTCATGTGGGCA+TGG | + | chr3_4:71163633-71163652 | None:intergenic | 50.0% | |
| GCCACAAATTGAAAAGCCGG+AGG | - | chr3_4:71163733-71163752 | Msa0519190:CDS | 50.0% | |
| ! | TACCTCCGCCGTTGTTTCAC+CGG | - | chr3_4:71161147-71161166 | Msa0519190:CDS | 55.0% |
| TTGAGATAAGAGACCGGCGC+CGG | + | chr3_4:71161169-71161188 | None:intergenic | 55.0% | |
| CCTTCTCTCGTCCTCATCCA+CGG | - | chr3_4:71161255-71161274 | Msa0519190:intron | 55.0% | |
| CTCGTCCTCATCCACGGTTT+CGG | - | chr3_4:71161261-71161280 | Msa0519190:intron | 55.0% | |
| TAGGACCGAAACCGTGGATG+AGG | + | chr3_4:71161269-71161288 | None:intergenic | 55.0% | |
| CATCCACGGTTTCGGTCCTA+TGG | - | chr3_4:71161269-71161288 | Msa0519190:intron | 55.0% | |
| GTTTCGGTCCTATGGCGATG+TGG | - | chr3_4:71161277-71161296 | Msa0519190:intron | 55.0% | |
| GTCCTATGGCGATGTGGCAA+TGG | - | chr3_4:71161283-71161302 | Msa0519190:intron | 55.0% | |
| CATAACTCGTTCCCACCACG+TGG | + | chr3_4:71161464-71161483 | None:intergenic | 55.0% | |
| ! | CACGTGGTGGGAACGAGTTA+TGG | - | chr3_4:71161462-71161481 | Msa0519190:intron | 55.0% |
| ! | GTGGTGGGAACGAGTTATGG+TGG | - | chr3_4:71161465-71161484 | Msa0519190:intron | 55.0% |
| CACATGGAAGGGTTTGAGGG+CGG | - | chr3_4:71163337-71163356 | Msa0519190:CDS | 55.0% | |
| CCGTGGATGAGGACGAGAGA+AGG | + | chr3_4:71161258-71161277 | None:intergenic | 60.0% | |
| TCGCCATAGGACCGAAACCG+TGG | + | chr3_4:71161275-71161294 | None:intergenic | 60.0% | |
| CGCCATTGCCACATCGCCAT+AGG | + | chr3_4:71161288-71161307 | None:intergenic | 60.0% | |
| AGGGTTTGAGGGCGGTGTGT+TGG | - | chr3_4:71163345-71163364 | Msa0519190:CDS | 60.0% | |
| !! | GACCGGCGCCGGTGAAACAA+CGG | + | chr3_4:71161158-71161177 | None:intergenic | 65.0% |
| CGCCGGTGAAACAACGGCGG+AGG | + | chr3_4:71161152-71161171 | None:intergenic | 70.0% | |
| !! | CGGCGCCGGTGAAACAACGG+CGG | + | chr3_4:71161155-71161174 | None:intergenic | 70.0% |
| ! | CGCCGTTGTTTCACCGGCGC+CGG | - | chr3_4:71161153-71161172 | Msa0519190:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 71160960 | 71163906 | 71160960 | ID=Msa0519190;Name=Msa0519190 |
| chr3_4 | mRNA | 71160960 | 71163906 | 71160960 | ID=Msa0519190-mRNA-1;Parent=Msa0519190;Name=Msa0519190-mRNA-1;_AED=0.04;_eAED=0.04;_QI=145|1|1|1|1|1|4|107|302 |
| chr3_4 | exon | 71160960 | 71161184 | 71160960 | ID=Msa0519190-mRNA-1:exon:19523;Parent=Msa0519190-mRNA-1 |
| chr3_4 | exon | 71162760 | 71162827 | 71162760 | ID=Msa0519190-mRNA-1:exon:19522;Parent=Msa0519190-mRNA-1 |
| chr3_4 | exon | 71162906 | 71163001 | 71162906 | ID=Msa0519190-mRNA-1:exon:19521;Parent=Msa0519190-mRNA-1 |
| chr3_4 | exon | 71163135 | 71163906 | 71163135 | ID=Msa0519190-mRNA-1:exon:19520;Parent=Msa0519190-mRNA-1 |
| chr3_4 | five_prime_UTR | 71163762 | 71163906 | 71163762 | ID=Msa0519190-mRNA-1:five_prime_utr;Parent=Msa0519190-mRNA-1 |
| chr3_4 | CDS | 71163135 | 71163761 | 71163135 | ID=Msa0519190-mRNA-1:cds;Parent=Msa0519190-mRNA-1 |
| chr3_4 | CDS | 71162906 | 71163001 | 71162906 | ID=Msa0519190-mRNA-1:cds;Parent=Msa0519190-mRNA-1 |
| chr3_4 | CDS | 71162760 | 71162827 | 71162760 | ID=Msa0519190-mRNA-1:cds;Parent=Msa0519190-mRNA-1 |
| chr3_4 | CDS | 71161067 | 71161184 | 71161067 | ID=Msa0519190-mRNA-1:cds;Parent=Msa0519190-mRNA-1 |
| chr3_4 | three_prime_UTR | 71160960 | 71161066 | 71160960 | ID=Msa0519190-mRNA-1:three_prime_utr;Parent=Msa0519190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
