Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1171800 | XP_013447071.1 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1171800 | sp|Q38861|XPB1_ARATH | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0069260 | Msa1171800 | 0.808406 | 3.145566e-50 | -8.615850e-47 |
Msa0069310 | Msa1171800 | 0.802405 | 5.699123e-49 | -8.615850e-47 |
Msa0102120 | Msa1171800 | 0.813206 | 2.877922e-51 | -8.615850e-47 |
Msa0120340 | Msa1171800 | 0.805959 | 1.037642e-49 | -8.615850e-47 |
Msa0607540 | Msa1171800 | 0.802794 | 4.737344e-49 | -8.615850e-47 |
Msa0654010 | Msa1171800 | 0.801338 | 9.438036e-49 | -8.615850e-47 |
Msa0660300 | Msa1171800 | 0.806505 | 7.964061e-50 | -8.615850e-47 |
Msa0662650 | Msa1171800 | 0.806109 | 9.648629e-50 | -8.615850e-47 |
Msa0708860 | Msa1171800 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
Msa0715110 | Msa1171800 | 0.800636 | 1.313327e-48 | -8.615850e-47 |
Msa0757080 | Msa1171800 | 0.809106 | 2.228745e-50 | -8.615850e-47 |
Msa0788710 | Msa1171800 | 0.802202 | 6.273449e-49 | -8.615850e-47 |
Msa0792260 | Msa1171800 | 0.838496 | 2.778519e-57 | -8.615850e-47 |
Msa0839330 | Msa1171800 | 0.801678 | 8.041353e-49 | -8.615850e-47 |
Msa0188630 | Msa1171800 | 0.815644 | 8.316118e-52 | -8.615850e-47 |
Msa0199800 | Msa1171800 | -0.801055 | 1.078527e-48 | -8.615850e-47 |
Msa0206620 | Msa1171800 | 0.807896 | 4.040003e-50 | -8.615850e-47 |
Msa0223380 | Msa1171800 | 0.818650 | 1.755175e-52 | -8.615850e-47 |
Msa0365490 | Msa1171800 | 0.836444 | 9.324601e-57 | -8.615850e-47 |
Msa0377530 | Msa1171800 | 0.816010 | 6.893945e-52 | -8.615850e-47 |
Msa0388030 | Msa1171800 | -0.802415 | 5.671279e-49 | -8.615850e-47 |
Msa0389810 | Msa1171800 | 0.833540 | 5.030254e-56 | -8.615850e-47 |
Msa0394340 | Msa1171800 | 0.801913 | 7.195558e-49 | -8.615850e-47 |
Msa0433530 | Msa1171800 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
Msa0458440 | Msa1171800 | 0.804354 | 2.249288e-49 | -8.615850e-47 |
Msa0464900 | Msa1171800 | 0.825191 | 5.362151e-54 | -8.615850e-47 |
Msa0465680 | Msa1171800 | -0.811532 | 6.678191e-51 | -8.615850e-47 |
Msa0465930 | Msa1171800 | 0.800080 | 1.704631e-48 | -8.615850e-47 |
Msa0466280 | Msa1171800 | 0.806019 | 1.007830e-49 | -8.615850e-47 |
Msa0468130 | Msa1171800 | 0.844500 | 7.273987e-59 | -8.615850e-47 |
Msa0473240 | Msa1171800 | 0.853579 | 2.177287e-61 | -8.615850e-47 |
Msa0477260 | Msa1171800 | 0.805565 | 1.255448e-49 | -8.615850e-47 |
Msa0480320 | Msa1171800 | 0.828002 | 1.144850e-54 | -8.615850e-47 |
Msa0482190 | Msa1171800 | -0.800158 | 1.643168e-48 | -8.615850e-47 |
Msa0982270 | Msa1171800 | 0.838270 | 3.177255e-57 | -8.615850e-47 |
Msa1006850 | Msa1171800 | 0.804996 | 1.651813e-49 | -8.615850e-47 |
Msa1037700 | Msa1171800 | -0.810740 | 9.917599e-51 | -8.615850e-47 |
Msa1047720 | Msa1171800 | 0.812326 | 4.486149e-51 | -8.615850e-47 |
Msa1075080 | Msa1171800 | -0.800017 | 1.755336e-48 | -8.615850e-47 |
Msa1085920 | Msa1171800 | 0.984530 | 7.893935e-161 | -8.615850e-47 |
Msa1092090 | Msa1171800 | 0.807651 | 4.554217e-50 | -8.615850e-47 |
Msa0265380 | Msa1171800 | 0.810199 | 1.298233e-50 | -8.615850e-47 |
Msa0270270 | Msa1171800 | 0.811390 | 7.170891e-51 | -8.615850e-47 |
Msa0303360 | Msa1171800 | 0.817236 | 3.660717e-52 | -8.615850e-47 |
Msa0344830 | Msa1171800 | 0.806612 | 7.557987e-50 | -8.615850e-47 |
Msa0344870 | Msa1171800 | 0.838944 | 2.127557e-57 | -8.615850e-47 |
Msa0356890 | Msa1171800 | -0.806008 | 1.013131e-49 | -8.615850e-47 |
Msa1113200 | Msa1171800 | 0.804364 | 2.238080e-49 | -8.615850e-47 |
Msa1114350 | Msa1171800 | -0.811235 | 7.748068e-51 | -8.615850e-47 |
Msa1157020 | Msa1171800 | 0.815823 | 7.589518e-52 | -8.615850e-47 |
Msa1171800 | Msa1173470 | 0.806948 | 6.420010e-50 | -8.615850e-47 |
Msa1171800 | Msa1199560 | 0.822779 | 1.973129e-53 | -8.615850e-47 |
Msa1171800 | Msa1233500 | 0.803766 | 2.981143e-49 | -8.615850e-47 |
Msa1171800 | Msa1246660 | 0.805552 | 1.263526e-49 | -8.615850e-47 |
Msa1171800 | Msa1276440 | 0.804054 | 2.597308e-49 | -8.615850e-47 |
Msa1171800 | Msa1279210 | 0.820531 | 6.529532e-53 | -8.615850e-47 |
Msa1171800 | Msa1287650 | 0.821114 | 4.796621e-53 | -8.615850e-47 |
Msa1171800 | Msa1287680 | 0.824691 | 7.037783e-54 | -8.615850e-47 |
Msa1171800 | Msa1289530 | 0.804006 | 2.657739e-49 | -8.615850e-47 |
Msa1171800 | Msa1300350 | -0.826668 | 2.390278e-54 | -8.615850e-47 |
Msa1171800 | Msa1306360 | 0.979960 | 3.965368e-149 | -8.615850e-47 |
Msa1171800 | Msa1306750 | 0.837739 | 4.351056e-57 | -8.615850e-47 |
Msa1171800 | Msa1307740 | 0.838927 | 2.149770e-57 | -8.615850e-47 |
Msa1171800 | Msa1309880 | 0.837488 | 5.045890e-57 | -8.615850e-47 |
Msa1171800 | Msa1310210 | 0.808986 | 2.365372e-50 | -8.615850e-47 |
Msa1171800 | Msa1314770 | 0.821145 | 4.718561e-53 | -8.615850e-47 |
Msa1171800 | Msa1328700 | 0.822317 | 2.527034e-53 | -8.615850e-47 |
Msa1171800 | Msa1348600 | 0.821034 | 5.004274e-53 | -8.615850e-47 |
Msa1171800 | Msa1369530 | 0.801825 | 7.501419e-49 | -8.615850e-47 |
Msa1171800 | Msa1393410 | 0.807579 | 4.718308e-50 | -8.615850e-47 |
Msa1171800 | Msa1407650 | 0.813556 | 2.410775e-51 | -8.615850e-47 |
Msa1171800 | Msa1435420 | 0.805344 | 1.397083e-49 | -8.615850e-47 |
Msa1171800 | Msa1444250 | -0.803003 | 4.288439e-49 | -8.615850e-47 |
Msa1171800 | Msa1451620 | -0.837504 | 5.000479e-57 | -8.615850e-47 |
Msa1171800 | Msa1454860 | 0.815049 | 1.128199e-51 | -8.615850e-47 |
Msa0484780 | Msa1171800 | 0.802800 | 4.723221e-49 | -8.615850e-47 |
Msa0505060 | Msa1171800 | 0.812014 | 5.245726e-51 | -8.615850e-47 |
Msa0517490 | Msa1171800 | 0.839413 | 1.608205e-57 | -8.615850e-47 |
Msa0519190 | Msa1171800 | 0.836577 | 8.625817e-57 | -8.615850e-47 |
Msa0526410 | Msa1171800 | 0.975569 | 3.406933e-140 | -8.615850e-47 |
Msa0598460 | Msa1171800 | 0.805461 | 1.320245e-49 | -8.615850e-47 |
Msa0844900 | Msa1171800 | 0.809701 | 1.661612e-50 | -8.615850e-47 |
Msa0876850 | Msa1171800 | -0.809086 | 2.250743e-50 | -8.615850e-47 |
Msa0908170 | Msa1171800 | 0.802164 | 6.388590e-49 | -8.615850e-47 |
Msa0935850 | Msa1171800 | 0.826730 | 2.310565e-54 | -8.615850e-47 |
Msa0959010 | Msa1171800 | 0.808003 | 3.833287e-50 | -8.615850e-47 |
Msa0961420 | Msa1171800 | -0.800079 | 1.705361e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1171800 | MtrunA17_Chr8g0387201 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1171800 | AT5G41370.1 | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
Msa1171800 | AT5G41360.1 | 84.252 | 762 | 116 | 3 | 6 | 764 | 5 | 765 | 0.0 | 1295 |
Msa1171800 | AT5G41360.2 | 83.574 | 761 | 118 | 4 | 6 | 763 | 5 | 761 | 0.0 | 1275 |
Find 175 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACATGCTCGGAATTTATT+TGG | 0.143949 | 8_1:+1709576 | None:intergenic |
CATGATTCTACTGCAAATTA+TGG | 0.163768 | 8_1:-1713975 | Msa1171800:CDS |
TGATCAGGGTTACAGCTTTA+AGG | 0.171890 | 8_1:-1708332 | Msa1171800:intron |
CTCCAACATGGGATAATTTA+AGG | 0.203128 | 8_1:+1711864 | None:intergenic |
ACATATAATATGGTTGCTTT+TGG | 0.236023 | 8_1:-1710439 | Msa1171800:CDS |
AACACCAACTAGGGACTTTC+CGG | 0.270811 | 8_1:+1710636 | None:intergenic |
CTAAGGCTCTTCTCTTGATA+TGG | 0.277696 | 8_1:+1711084 | None:intergenic |
AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 8_1:+1709905 | None:intergenic |
ATCACACAAATCGTCCTCTT+TGG | 0.280975 | 8_1:-1714317 | Msa1171800:CDS |
ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 8_1:+1711871 | None:intergenic |
TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 8_1:+1711126 | None:intergenic |
CATTGGTTTGCGAAGTTTCA+TGG | 0.296729 | 8_1:+1709470 | None:intergenic |
CATACAGTTTGGGACCAATT+AGG | 0.307490 | 8_1:+1710042 | None:intergenic |
CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 8_1:+1710031 | None:intergenic |
TGAATTATCACATTTGCTTC+AGG | 0.315902 | 8_1:+1708928 | None:intergenic |
AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 8_1:-1710014 | Msa1171800:CDS |
TTCGCTGTATGCTGCGGTTT+CGG | 0.319268 | 8_1:-1714081 | Msa1171800:CDS |
AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 8_1:-1708867 | Msa1171800:CDS |
ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 8_1:-1710056 | Msa1171800:CDS |
CATATTTAGTCAAGTTCTAT+TGG | 0.326490 | 8_1:-1706222 | Msa1171800:three_prime_UTR |
TGTCTCTTTGCTGGATCTTT+CGG | 0.327780 | 8_1:+1706498 | None:intergenic |
TATTTGGATTCATCACATAA+AGG | 0.329096 | 8_1:+1709592 | None:intergenic |
AAACCCTCGTGTGATTAAAA+AGG | 0.329957 | 8_1:-1706443 | Msa1171800:three_prime_UTR |
ATATTTGCAGGTGCTGAAAA+AGG | 0.330555 | 8_1:-1714650 | Msa1171800:intron |
ATATGGCCGTGGTTGTGCTT+GGG | 0.332017 | 8_1:+1711101 | None:intergenic |
CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 8_1:-1710031 | Msa1171800:CDS |
CTTCGCAAACCAATGATATA+TGG | 0.342358 | 8_1:-1709462 | Msa1171800:CDS |
AACAGTATTTACGTCTTTGC+TGG | 0.343453 | 8_1:+1709305 | None:intergenic |
AATAAGTGGTGTCTCTTTGC+TGG | 0.346134 | 8_1:+1706489 | None:intergenic |
TCACACAAATCGTCCTCTTT+GGG | 0.353153 | 8_1:-1714316 | Msa1171800:CDS |
CACTTATTTAGAAAACGATT+TGG | 0.355765 | 8_1:-1706474 | Msa1171800:CDS |
ATTTGGATTCATCACATAAA+GGG | 0.355854 | 8_1:+1709593 | None:intergenic |
AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 8_1:-1710365 | Msa1171800:CDS |
AGCTTCCTAAAGAGATGATT+AGG | 0.364739 | 8_1:-1714004 | Msa1171800:CDS |
AAGAGCCTTAGTAAAATGTT+TGG | 0.369614 | 8_1:-1711072 | Msa1171800:CDS |
ATAAACCTAATCATCTCTTT+AGG | 0.372165 | 8_1:+1713999 | None:intergenic |
TGTTGTGACAACATATAATA+TGG | 0.372226 | 8_1:-1710449 | Msa1171800:CDS |
TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 8_1:-1710621 | Msa1171800:CDS |
CATTTACACACCTCTGGAAA+TGG | 0.378477 | 8_1:+1713906 | None:intergenic |
GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 8_1:-1708881 | Msa1171800:CDS |
CCATCGCCGAGCCCGTTTGC+AGG | 0.382900 | 8_1:-1714221 | Msa1171800:intron |
CTTGTAGCACCATATATCAT+TGG | 0.385865 | 8_1:+1709453 | None:intergenic |
CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 8_1:+1710032 | None:intergenic |
TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 8_1:-1708588 | Msa1171800:intron |
CATAATTTGCAGTAGAATCA+TGG | 0.398414 | 8_1:+1713976 | None:intergenic |
CCCTGTGTGGTGAGGTCACC+AGG | 0.399682 | 8_1:+1706272 | None:intergenic |
ATGATTCTACTGCAAATTAT+GGG | 0.406082 | 8_1:-1713974 | Msa1171800:CDS |
TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 8_1:+1711127 | None:intergenic |
CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 8_1:-1711066 | Msa1171800:intron |
ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 8_1:-1710200 | Msa1171800:CDS |
AGTCTTATACATCGAAATCA+TGG | 0.418433 | 8_1:-1714755 | Msa1171800:exon |
TCGGCTTGCTCTTGATCTGT+TGG | 0.423357 | 8_1:+1706517 | None:intergenic |
AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 8_1:-1710380 | Msa1171800:CDS |
GATATGGCCGTGGTTGTGCT+TGG | 0.426514 | 8_1:+1711100 | None:intergenic |
TATCACCACGTGCCCTTTCG+TGG | 0.435050 | 8_1:+1709538 | None:intergenic |
TCATCATCTCGATGATCAAC+TGG | 0.437109 | 8_1:-1706948 | Msa1171800:CDS |
AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 8_1:-1710381 | Msa1171800:CDS |
CCTCTTTGGGCTTGTGACAA+TGG | 0.452599 | 8_1:-1714303 | Msa1171800:CDS |
TTTGTACCTGCAAACGGGCT+CGG | 0.455277 | 8_1:+1714215 | None:intergenic |
AATCATCTCTTTAGGAAGCT+TGG | 0.456652 | 8_1:+1714007 | None:intergenic |
CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 8_1:-1710191 | Msa1171800:intron |
AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 8_1:-1710039 | Msa1171800:CDS |
CAAGAGAAAGATTGTTATGA+TGG | 0.462522 | 8_1:-1706144 | Msa1171800:three_prime_UTR |
AGAGGACGATTTGTGTGATC+CGG | 0.463995 | 8_1:+1714321 | None:intergenic |
TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 8_1:-1708903 | Msa1171800:CDS |
ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 8_1:-1709977 | Msa1171800:CDS |
CAAATCTAGATTACCTGAGC+AGG | 0.474858 | 8_1:+1713082 | None:intergenic |
ACCTATCAGGTATTGAATGC+TGG | 0.476448 | 8_1:-1706849 | Msa1171800:intron |
TTCTCATAAATTACCACGAA+AGG | 0.478217 | 8_1:-1709551 | Msa1171800:CDS |
TCTCTTGTACTGTATATTCG+TGG | 0.478889 | 8_1:+1706160 | None:intergenic |
TAGCAAATTAGAGTTGAAAC+CGG | 0.479614 | 8_1:-1714340 | Msa1171800:CDS |
ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 8_1:-1710655 | Msa1171800:CDS |
AGGTATTGAAGACATTGCTC+AGG | 0.488409 | 8_1:-1713804 | Msa1171800:CDS |
CTCTTCTCTTGATATGGCCG+TGG | 0.488835 | 8_1:+1711090 | None:intergenic |
AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 8_1:-1706741 | Msa1171800:CDS |
CTGTATGCTGCGGTTTCGGT+TGG | 0.496346 | 8_1:-1714077 | Msa1171800:CDS |
GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 8_1:-1708866 | Msa1171800:CDS |
TTGTATTCGTGCATCGACTC+TGG | 0.499316 | 8_1:+1714116 | None:intergenic |
ATTCAGATCTCTTCACATGC+TGG | 0.501954 | 8_1:-1708910 | Msa1171800:CDS |
GTTTAGGGTACTCATGGAGA+TGG | 0.502400 | 8_1:-1713220 | Msa1171800:intron |
GTCGTCATCGTAAGCATCAT+CGG | 0.503028 | 8_1:+1714462 | None:intergenic |
CAATGATATATGGTGCTACA+AGG | 0.508056 | 8_1:-1709452 | Msa1171800:intron |
GGATGGTTTATGTGGAGTAC+AGG | 0.509532 | 8_1:-1706719 | Msa1171800:intron |
TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 8_1:-1710011 | Msa1171800:CDS |
TACATAATTACATTAACTTG+TGG | 0.516375 | 8_1:-1706323 | Msa1171800:three_prime_UTR |
TCTTATACTCAAATATATCC+TGG | 0.516646 | 8_1:-1706290 | Msa1171800:three_prime_UTR |
TGCCGTCTCTGTGGATCAGT+GGG | 0.520735 | 8_1:-1710566 | Msa1171800:CDS |
GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 8_1:-1706750 | Msa1171800:CDS |
TCTCATAAATTACCACGAAA+GGG | 0.522463 | 8_1:-1709550 | Msa1171800:CDS |
ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 8_1:-1710027 | Msa1171800:CDS |
TAAGAAGAATCGTTACTATG+TGG | 0.527424 | 8_1:-1713934 | Msa1171800:CDS |
TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 8_1:-1711866 | Msa1171800:CDS |
GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 8_1:-1710475 | Msa1171800:CDS |
TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 8_1:-1710090 | Msa1171800:intron |
AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 8_1:-1706771 | Msa1171800:CDS |
AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 8_1:+1710626 | None:intergenic |
ATGCCGTCTCTGTGGATCAG+TGG | 0.537416 | 8_1:-1710567 | Msa1171800:CDS |
AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 8_1:-1708575 | Msa1171800:CDS |
CCTGCAAACGGGCTCGGCGA+TGG | 0.542090 | 8_1:+1714221 | None:intergenic |
GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 8_1:-1710379 | Msa1171800:CDS |
TGCAAAAGGGATGGTTTATG+TGG | 0.544520 | 8_1:-1706727 | Msa1171800:CDS |
ATAAATGTGTACCTGGGTAT+CGG | 0.546776 | 8_1:+1708508 | None:intergenic |
AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 8_1:-1709913 | Msa1171800:intron |
AACGACATATTTGTTCATCT+CGG | 0.550470 | 8_1:+1710515 | None:intergenic |
AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 8_1:-1706986 | Msa1171800:CDS |
CCTGGGTATCGGTCGACACA+AGG | 0.553236 | 8_1:+1708519 | None:intergenic |
ATTCGAAATTGATCCTGCTC+AGG | 0.555292 | 8_1:-1713095 | Msa1171800:intron |
CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 8_1:-1708880 | Msa1171800:CDS |
CCTTGTGTCGACCGATACCC+AGG | 0.557821 | 8_1:-1708519 | Msa1171800:intron |
GCGAAGTTTCATGGCATACT+CGG | 0.560609 | 8_1:+1709479 | None:intergenic |
CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 8_1:-1710199 | Msa1171800:CDS |
ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 8_1:+1710663 | None:intergenic |
AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 8_1:+1711853 | None:intergenic |
GTCTTATACATCGAAATCAT+GGG | 0.570971 | 8_1:-1714754 | Msa1171800:exon |
TATGGCCGTGGTTGTGCTTG+GGG | 0.571603 | 8_1:+1711102 | None:intergenic |
ATGACAATAATCAAGAATGC+AGG | 0.572001 | 8_1:-1706382 | Msa1171800:three_prime_UTR |
TTATGAGAAACTCACATGCT+CGG | 0.574806 | 8_1:+1709565 | None:intergenic |
AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 8_1:+1710627 | None:intergenic |
CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 8_1:-1710682 | Msa1171800:intron |
TCATAAGCTTGTTTGTACAA+AGG | 0.583537 | 8_1:+1714255 | None:intergenic |
ATAAGTATCATCATCATCAT+CGG | 0.584559 | 8_1:+1714489 | None:intergenic |
GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 8_1:-1710359 | Msa1171800:intron |
GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 8_1:-1708860 | Msa1171800:intron |
AGATGTATTACTCAACTAAG+AGG | 0.589026 | 8_1:-1708369 | Msa1171800:CDS |
GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 8_1:-1708579 | Msa1171800:CDS |
ACCGCATTCGCTGTATGCTG+CGG | 0.590897 | 8_1:-1714087 | Msa1171800:CDS |
AATGCTGGTGATGATGCAGT+TGG | 0.591042 | 8_1:-1706834 | Msa1171800:CDS |
TCCTGGTGACCTCACCACAC+AGG | 0.592766 | 8_1:-1706273 | Msa1171800:three_prime_UTR |
TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 8_1:-1709353 | Msa1171800:intron |
GATGATCAACTGGCACTACT+CGG | 0.594721 | 8_1:-1706938 | Msa1171800:CDS |
CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 8_1:-1711863 | Msa1171800:CDS |
TGCAGTACTGGGCGTAACAA+AGG | 0.602107 | 8_1:-1706540 | Msa1171800:intron |
CCTGGTGACCTCACCACACA+GGG | 0.602612 | 8_1:-1706272 | Msa1171800:three_prime_UTR |
AAAGCACTAGGTGAGATTGA+AGG | 0.606763 | 8_1:-1713184 | Msa1171800:CDS |
TTTACAATCAGCAAAGCACT+AGG | 0.610051 | 8_1:-1713196 | Msa1171800:CDS |
CGAGATGATGATAGTGCAAG+CGG | 0.611865 | 8_1:+1706960 | None:intergenic |
GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 8_1:-1710640 | Msa1171800:CDS |
TAAAGCCCCAAGCACAACCA+CGG | 0.615153 | 8_1:-1711107 | Msa1171800:CDS |
GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 8_1:+1711121 | None:intergenic |
AACATCAACCCTGTGTGGTG+AGG | 0.619584 | 8_1:+1706264 | None:intergenic |
AAGCGGGATCCTTCATCAGA+TGG | 0.620834 | 8_1:+1706977 | None:intergenic |
AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 8_1:-1706736 | Msa1171800:CDS |
ATGATGCTATATCGCGAGCA+AGG | 0.624247 | 8_1:-1713780 | Msa1171800:CDS |
ACCGCAGCATACAGCGAATG+CGG | 0.628106 | 8_1:+1714086 | None:intergenic |
TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 8_1:-1706933 | Msa1171800:intron |
TAATTATGTAACTTATGTTG+AGG | 0.632956 | 8_1:+1706336 | None:intergenic |
GGCAACAAATGCCGTCTCTG+TGG | 0.633215 | 8_1:-1710575 | Msa1171800:CDS |
CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 8_1:+1710467 | None:intergenic |
TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 8_1:-1708564 | Msa1171800:CDS |
GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 8_1:+1711852 | None:intergenic |
GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 8_1:-1708583 | Msa1171800:intron |
AGCCCACTGATCCACAGAGA+CGG | 0.638964 | 8_1:+1710564 | None:intergenic |
GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 8_1:-1711133 | Msa1171800:CDS |
GCGAGCAAGGATCACTTCTG+AGG | 0.642760 | 8_1:-1713767 | Msa1171800:intron |
GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 8_1:-1710661 | Msa1171800:CDS |
GGTATTGAAGACATTGCTCA+GGG | 0.645900 | 8_1:-1713803 | Msa1171800:CDS |
CGGGATCCTTCATCAGATGG+AGG | 0.648662 | 8_1:+1706980 | None:intergenic |
ATTATACAGACGCCACCGCA+TGG | 0.651372 | 8_1:+1706418 | None:intergenic |
GCATGATAAACAGGTGCACG+TGG | 0.651390 | 8_1:-1710258 | Msa1171800:intron |
GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 8_1:-1706740 | Msa1171800:CDS |
GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 8_1:-1710484 | Msa1171800:CDS |
AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 8_1:+1710646 | None:intergenic |
AGAAAGTCTCAAGGAAAATG+CGG | 0.658900 | 8_1:+1714280 | None:intergenic |
GAGATGATGATAGTGCAAGC+GGG | 0.661161 | 8_1:+1706961 | None:intergenic |
GAAACTAACGAATTTAGCAG+CGG | 0.670070 | 8_1:+1714604 | None:intergenic |
CTGGGTATCGGTCGACACAA+GGG | 0.670656 | 8_1:+1708520 | None:intergenic |
ACAAAGGTGAGAAAGTCTCA+AGG | 0.672300 | 8_1:+1714271 | None:intergenic |
GCTAAATCAAGCAGAAGTAG+CGG | 0.672882 | 8_1:-1713146 | Msa1171800:CDS |
CCATTGTCACAAGCCCAAAG+AGG | 0.674133 | 8_1:+1714303 | None:intergenic |
AATTACCACGAAAGGGCACG+TGG | 0.685034 | 8_1:-1709543 | Msa1171800:CDS |
TGTGGAATCTCCATTTCCAG+AGG | 0.687355 | 8_1:-1713916 | Msa1171800:intron |
CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 8_1:-1708572 | Msa1171800:CDS |
TACATCGAAATCATGGGACA+CGG | 0.694471 | 8_1:-1714748 | Msa1171800:intron |
AATCAAACATCAACCCTGTG+TGG | 0.698865 | 8_1:+1706259 | None:intergenic |
GATGATGCTTACGATGACGA+CGG | 0.737584 | 8_1:-1714460 | Msa1171800:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACATTTTTAAAGATTAAAA+AGG | + | chr8_1:1708313-1708332 | None:intergenic | 10.0% |
!! | AATAAAATAATTGAAATGAA+TGG | + | chr8_1:1709129-1709148 | None:intergenic | 10.0% |
!!! | ATATATAATGTTATTTGATT+GGG | + | chr8_1:1709557-1709576 | None:intergenic | 10.0% |
!!! | TATATATAATGTTATTTGAT+TGG | + | chr8_1:1709558-1709577 | None:intergenic | 10.0% |
!! | AATCAAATAACATTATATAT+AGG | - | chr8_1:1709557-1709576 | Msa1171800:CDS | 10.0% |
!! | AATCTTTAGTTAAAATTATA+AGG | - | chr8_1:1710968-1710987 | Msa1171800:intron | 10.0% |
!!! | TTTTTTTTAGTTTTATTTTG+AGG | - | chr8_1:1711579-1711598 | Msa1171800:intron | 10.0% |
!! | TAAAAAAAAAAATGTTAACA+TGG | + | chr8_1:1711809-1711828 | None:intergenic | 10.0% |
!! | ATTATTAATTCTGAATTTAT+TGG | - | chr8_1:1712072-1712091 | Msa1171800:intron | 10.0% |
!!! | ATTTCAAAAAAATAGATTTT+GGG | + | chr8_1:1712810-1712829 | None:intergenic | 10.0% |
!!! | TATTTCAAAAAAATAGATTT+TGG | + | chr8_1:1712811-1712830 | None:intergenic | 10.0% |
!!! | AAAAAAAAAAACACTTTTTT+TGG | - | chr8_1:1712868-1712887 | Msa1171800:intron | 10.0% |
!!! | AAAAAAAAAACACTTTTTTT+GGG | - | chr8_1:1712869-1712888 | Msa1171800:intron | 10.0% |
!!! | TAAAAAAAAATACTTTTTTC+GGG | - | chr8_1:1712945-1712964 | Msa1171800:intron | 10.0% |
!! | TTTCAATTAATTATCTCATT+AGG | - | chr8_1:1706409-1706428 | Msa1171800:three_prime_UTR | 15.0% |
!! | TTCAATTAATTATCTCATTA+GGG | - | chr8_1:1706410-1706429 | Msa1171800:three_prime_UTR | 15.0% |
!! | ATTTGTGAAATTATAATGTT+TGG | - | chr8_1:1706683-1706702 | Msa1171800:intron | 15.0% |
!! | ATAATAATAATACGACTAAA+TGG | + | chr8_1:1707838-1707857 | None:intergenic | 15.0% |
!! | TAGTCGTATTATTATTATAA+AGG | - | chr8_1:1707840-1707859 | Msa1171800:intron | 15.0% |
!!! | GAATTTGTTTTCTTAAAAAA+GGG | + | chr8_1:1708166-1708185 | None:intergenic | 15.0% |
!!! | TGAATTTGTTTTCTTAAAAA+AGG | + | chr8_1:1708167-1708186 | None:intergenic | 15.0% |
!! | ATGTAATTTATCTTCTTAAA+TGG | - | chr8_1:1708570-1708589 | Msa1171800:CDS | 15.0% |
!!! | CTTTATTTAAAGTTTCAAAA+AGG | + | chr8_1:1708701-1708720 | None:intergenic | 15.0% |
!! | GAAACTTTAAATAAAGTTAA+AGG | - | chr8_1:1708705-1708724 | Msa1171800:intron | 15.0% |
!!! | AATTTAAAATAAAATTTGCC+GGG | + | chr8_1:1709860-1709879 | None:intergenic | 15.0% |
!!! | CAATTTAAAATAAAATTTGC+CGG | + | chr8_1:1709861-1709880 | None:intergenic | 15.0% |
!!! | TGTCTAAAATATTATGTTAA+CGG | - | chr8_1:1709997-1710016 | Msa1171800:CDS | 15.0% |
!!! | ATAGATTATTTAAGTTAGAA+TGG | - | chr8_1:1711672-1711691 | Msa1171800:intron | 15.0% |
!!! | TAGATTATTTAAGTTAGAAT+GGG | - | chr8_1:1711673-1711692 | Msa1171800:intron | 15.0% |
!! | AAATTTAGTATTCAATATGT+AGG | + | chr8_1:1712114-1712133 | None:intergenic | 15.0% |
!! | ATTCAAATTCATGAATTAAA+TGG | - | chr8_1:1712232-1712251 | Msa1171800:intron | 15.0% |
!! | ATCCAATAATCAATAATATA+TGG | + | chr8_1:1712365-1712384 | None:intergenic | 15.0% |
!!! | CGTTTGTTTTAATTTTTTTA+GGG | - | chr8_1:1712668-1712687 | Msa1171800:intron | 15.0% |
!!! | GTTTGTTTTAATTTTTTTAG+GGG | - | chr8_1:1712669-1712688 | Msa1171800:intron | 15.0% |
!!! | TTTTTTTTTAGTGTTTGTTT+AGG | - | chr8_1:1712713-1712732 | Msa1171800:intron | 15.0% |
!!! | ATCTATTTTTTTGAAATACA+AGG | - | chr8_1:1712813-1712832 | Msa1171800:intron | 15.0% |
!!! | ATAGTTTTTTTATATGTAAC+AGG | - | chr8_1:1713819-1713838 | Msa1171800:intron | 15.0% |
!! | TCTTAATTAAGAATTCAAAA+AGG | + | chr8_1:1714214-1714233 | None:intergenic | 15.0% |
!! | AATTTCAATTTCATATTTGC+AGG | - | chr8_1:1706174-1706193 | Msa1171800:three_prime_UTR | 20.0% |
!!! | TTTCTTATATTATTTTCCAC+AGG | - | chr8_1:1706303-1706322 | Msa1171800:three_prime_UTR | 20.0% |
!!! | TCATTAGGGTTTTTTTATTT+GGG | - | chr8_1:1706424-1706443 | Msa1171800:three_prime_UTR | 20.0% |
!! | TTCTAAACTACAATTGTATA+GGG | + | chr8_1:1707579-1707598 | None:intergenic | 20.0% |
!! | ATTCTAAACTACAATTGTAT+AGG | + | chr8_1:1707580-1707599 | None:intergenic | 20.0% |
!!! | AGCTTTTTTTTTTTTTTTGC+AGG | - | chr8_1:1707777-1707796 | Msa1171800:intron | 20.0% |
!!! | TTTTCTAAAATGCAATACAT+TGG | + | chr8_1:1707964-1707983 | None:intergenic | 20.0% |
!! | TTAAAAAATGTCAACAATGT+TGG | + | chr8_1:1708644-1708663 | None:intergenic | 20.0% |
!! | AAATAAAGTTAAAGGATTTC+TGG | - | chr8_1:1708713-1708732 | Msa1171800:intron | 20.0% |
!!! | TAGTTTTGCCTTAATAATAT+AGG | - | chr8_1:1708738-1708757 | Msa1171800:intron | 20.0% |
!!! | AGTTTTGCCTTAATAATATA+GGG | - | chr8_1:1708739-1708758 | Msa1171800:intron | 20.0% |
!! | TTATCTATACCTATGTATAA+AGG | - | chr8_1:1709063-1709082 | Msa1171800:intron | 20.0% |
!! | TATCTATACCTATGTATAAA+GGG | - | chr8_1:1709064-1709083 | Msa1171800:intron | 20.0% |
!! | CAAAAAATCAGTCATTTAAT+TGG | + | chr8_1:1709173-1709192 | None:intergenic | 20.0% |
!!! | TTTATTGGTTTAAATCATTG+TGG | - | chr8_1:1709293-1709312 | Msa1171800:CDS | 20.0% |
!!! | TTATTGGTTTAAATCATTGT+GGG | - | chr8_1:1709294-1709313 | Msa1171800:CDS | 20.0% |
!! | TCTGAAAAAAAAAATCATTG+TGG | - | chr8_1:1709317-1709336 | Msa1171800:CDS | 20.0% |
!! | CTGAAAAAAAAAATCATTGT+GGG | - | chr8_1:1709318-1709337 | Msa1171800:CDS | 20.0% |
!! | TGGTATCAACTTTATATATA+GGG | + | chr8_1:1709462-1709481 | None:intergenic | 20.0% |
!! | TTGGTATCAACTTTATATAT+AGG | + | chr8_1:1709463-1709482 | None:intergenic | 20.0% |
!! | GTTATTATCTTGCAAATTTA+TGG | - | chr8_1:1709627-1709646 | Msa1171800:intron | 20.0% |
!!! | TTTTTTTTTCTTTTTCCTAC+AGG | - | chr8_1:1709682-1709701 | Msa1171800:intron | 20.0% |
!!! | TTAAGAGGATTTTTTTTTGT+TGG | + | chr8_1:1709928-1709947 | None:intergenic | 20.0% |
!! | TATAACAACAACAAATTAAG+AGG | + | chr8_1:1709943-1709962 | None:intergenic | 20.0% |
!!! | GTCTAAAATATTATGTTAAC+GGG | - | chr8_1:1709998-1710017 | Msa1171800:CDS | 20.0% |
!!! | TCTAAAATATTATGTTAACG+GGG | - | chr8_1:1709999-1710018 | Msa1171800:CDS | 20.0% |
!! | TGTTAATACTATTGATATTG+TGG | - | chr8_1:1711777-1711796 | Msa1171800:intron | 20.0% |
!! | GTTAATACTATTGATATTGT+GGG | - | chr8_1:1711778-1711797 | Msa1171800:intron | 20.0% |
!! | AATACTTAAACTATCATTCA+AGG | - | chr8_1:1712404-1712423 | Msa1171800:intron | 20.0% |
!!! | AGGTATTTTCTTTCAATTTT+CGG | - | chr8_1:1712524-1712543 | Msa1171800:intron | 20.0% |
!!! | GCGTTTGTTTTAATTTTTTT+AGG | - | chr8_1:1712667-1712686 | Msa1171800:intron | 20.0% |
!!! | TATTTTTTTGAAATACAAGG+AGG | - | chr8_1:1712816-1712835 | Msa1171800:intron | 20.0% |
!! | CTTACTTTAAATTAGACAAA+GGG | + | chr8_1:1713083-1713102 | None:intergenic | 20.0% |
!! | ACTTACTTTAAATTAGACAA+AGG | + | chr8_1:1713084-1713103 | None:intergenic | 20.0% |
!!! | TTGTCTAATTTAAAGTAAGT+TGG | - | chr8_1:1713084-1713103 | Msa1171800:intron | 20.0% |
!!! | AATGAGTAAAAGCTTTTATT+TGG | - | chr8_1:1713225-1713244 | Msa1171800:intron | 20.0% |
!!! | AACTTATTTTTTATGCTCAA+TGG | - | chr8_1:1713690-1713709 | Msa1171800:intron | 20.0% |
!!! | TGAGAATTTGAAATTTTTGT+TGG | - | chr8_1:1713754-1713773 | Msa1171800:intron | 20.0% |
!! | TTAAATTCTTTGATGCTAAT+TGG | - | chr8_1:1714261-1714280 | Msa1171800:CDS | 20.0% |
!! | TAATTATGTAACTTATGTTG+AGG | + | chr8_1:1714503-1714522 | None:intergenic | 20.0% |
!!! | TACATAATTACATTAACTTG+TGG | - | chr8_1:1714513-1714532 | Msa1171800:CDS | 20.0% |
!!! | AAATTGTGTTTTAGACTTTT+AGG | - | chr8_1:1714718-1714737 | Msa1171800:intron | 20.0% |
! | TTAATCTTGATGAAGTGATT+GGG | + | chr8_1:1706140-1706159 | None:intergenic | 25.0% |
! | ATAAGTATCATCATCATCAT+CGG | + | chr8_1:1706350-1706369 | None:intergenic | 25.0% |
!!! | CTCATTAGGGTTTTTTTATT+TGG | - | chr8_1:1706423-1706442 | Msa1171800:three_prime_UTR | 25.0% |
!!! | CATTAGGGTTTTTTTATTTG+GGG | - | chr8_1:1706425-1706444 | Msa1171800:three_prime_UTR | 25.0% |
! | TTTGTGTTATGTTAATCAGA+AGG | - | chr8_1:1706458-1706477 | Msa1171800:exon | 25.0% |
! | TTAATCAGAAGGAAAAACAA+AGG | - | chr8_1:1706469-1706488 | Msa1171800:CDS | 25.0% |
! | ATAAACCTAATCATCTCTTT+AGG | + | chr8_1:1706840-1706859 | None:intergenic | 25.0% |
! | ATGATTCTACTGCAAATTAT+GGG | - | chr8_1:1706862-1706881 | Msa1171800:intron | 25.0% |
!! | GTTTTTGTAACAAATTTTGC+AGG | - | chr8_1:1707012-1707031 | Msa1171800:intron | 25.0% |
! | TTAACATGTTTGAATAGCTT+AGG | - | chr8_1:1707127-1707146 | Msa1171800:intron | 25.0% |
!! | GTATGATCCTTATTTATTCT+TGG | - | chr8_1:1707193-1707212 | Msa1171800:intron | 25.0% |
! | ATATATCACAAATTACAGAG+AGG | + | chr8_1:1707235-1707254 | None:intergenic | 25.0% |
! | AACCATATTATACACAAAAC+AGG | + | chr8_1:1707299-1707318 | None:intergenic | 25.0% |
!! | TGTTTTGTGTATAATATGGT+TGG | - | chr8_1:1707298-1707317 | Msa1171800:intron | 25.0% |
!! | GTTTTGTGTATAATATGGTT+GGG | - | chr8_1:1707299-1707318 | Msa1171800:intron | 25.0% |
! | TCTAAACTACAATTGTATAG+GGG | + | chr8_1:1707578-1707597 | None:intergenic | 25.0% |
! | ATGGAAAACAAAGAGATTAT+CGG | + | chr8_1:1707819-1707838 | None:intergenic | 25.0% |
!! | TGATTATTTAGAACACTTCT+AGG | - | chr8_1:1708080-1708099 | Msa1171800:intron | 25.0% |
!! | ATGTAGTTTTTCCTATTACT+CGG | + | chr8_1:1708218-1708237 | None:intergenic | 25.0% |
! | TAATAGGAAAAACTACATCA+GGG | - | chr8_1:1708220-1708239 | Msa1171800:intron | 25.0% |
!!! | GTTGACATTTTTTAACACAA+AGG | - | chr8_1:1708649-1708668 | Msa1171800:intron | 25.0% |
!!! | ATTTTGGCCCTATATTATTA+AGG | + | chr8_1:1708749-1708768 | None:intergenic | 25.0% |
! | AGAAGATTAAATTTATGCTG+TGG | - | chr8_1:1708800-1708819 | Msa1171800:intron | 25.0% |
! | GAAGATTAAATTTATGCTGT+GGG | - | chr8_1:1708801-1708820 | Msa1171800:intron | 25.0% |
!! | AAAATTTGTGATTTGTGTAC+AGG | - | chr8_1:1708916-1708935 | Msa1171800:CDS | 25.0% |
! | AGTAATGCTTTATATACTCA+TGG | - | chr8_1:1709022-1709041 | Msa1171800:intron | 25.0% |
! | ATCTATACCTATGTATAAAG+GGG | - | chr8_1:1709065-1709084 | Msa1171800:intron | 25.0% |
! | TTAATATCCCCTTTATACAT+AGG | + | chr8_1:1709075-1709094 | None:intergenic | 25.0% |
!! | TCTAATACTCACTCTTTTAT+TGG | - | chr8_1:1709278-1709297 | Msa1171800:intron | 25.0% |
! | ACTTTATATATAGGGATATG+AGG | + | chr8_1:1709454-1709473 | None:intergenic | 25.0% |
!!! | ATAAAGTTGATACCAAGTTT+TGG | - | chr8_1:1709467-1709486 | Msa1171800:CDS | 25.0% |
! | AAAAAAACTACACCAAAACT+TGG | + | chr8_1:1709482-1709501 | None:intergenic | 25.0% |
! | ACATTATATATAGGCATATC+AGG | - | chr8_1:1709566-1709585 | Msa1171800:CDS | 25.0% |
!!! | CAGAGCTATTTTCAATTTTA+AGG | - | chr8_1:1709602-1709621 | Msa1171800:intron | 25.0% |
!! | CATTTCCAAACATTTTACTA+AGG | + | chr8_1:1709772-1709791 | None:intergenic | 25.0% |
! | CTTAGTAAAATGTTTGGAAA+TGG | - | chr8_1:1709770-1709789 | Msa1171800:intron | 25.0% |
! | TAAAATGTTTGGAAATGGTA+TGG | - | chr8_1:1709775-1709794 | Msa1171800:intron | 25.0% |
! | CATTGCATTCTTGTTAAATT+TGG | - | chr8_1:1709830-1709849 | Msa1171800:intron | 25.0% |
! | CTTAATTACTTAAACAACAG+TGG | - | chr8_1:1710070-1710089 | Msa1171800:CDS | 25.0% |
! | TGTTGTGACAACATATAATA+TGG | - | chr8_1:1710387-1710406 | Msa1171800:CDS | 25.0% |
!!! | ACATATAATATGGTTGCTTT+TGG | - | chr8_1:1710397-1710416 | Msa1171800:CDS | 25.0% |
!!! | CATATAATATGGTTGCTTTT+GGG | - | chr8_1:1710398-1710417 | Msa1171800:CDS | 25.0% |
!!! | ATATAATATGGTTGCTTTTG+GGG | - | chr8_1:1710399-1710418 | Msa1171800:CDS | 25.0% |
! | AAGAAATAAGAAACAGAGAA+TGG | - | chr8_1:1710455-1710474 | Msa1171800:CDS | 25.0% |
! | AGAAATAAGAAACAGAGAAT+GGG | - | chr8_1:1710456-1710475 | Msa1171800:CDS | 25.0% |
! | GAGGTAATTGTTAAGATTTA+CGG | - | chr8_1:1710496-1710515 | Msa1171800:CDS | 25.0% |
!! | AATGACTTTTCGAAACATAT+GGG | + | chr8_1:1710610-1710629 | None:intergenic | 25.0% |
!! | TAATGACTTTTCGAAACATA+TGG | + | chr8_1:1710611-1710630 | None:intergenic | 25.0% |
! | AAAATTATAAGGAGCAATTG+TGG | - | chr8_1:1710979-1710998 | Msa1171800:intron | 25.0% |
! | ATTTGGATTCATCACATAAA+GGG | + | chr8_1:1711246-1711265 | None:intergenic | 25.0% |
! | TATTTGGATTCATCACATAA+AGG | + | chr8_1:1711247-1711266 | None:intergenic | 25.0% |
!!! | AAATACTGTTTTTCTTTCCA+AGG | - | chr8_1:1711544-1711563 | Msa1171800:intron | 25.0% |
!!! | AGTATTAACAAGAAGTACTA+AGG | + | chr8_1:1711767-1711786 | None:intergenic | 25.0% |
! | TAGTATTCAATATGTAGGAT+GGG | + | chr8_1:1712109-1712128 | None:intergenic | 25.0% |
! | TTAGTATTCAATATGTAGGA+TGG | + | chr8_1:1712110-1712129 | None:intergenic | 25.0% |
!! | TAAATTTCATTTGTTTGCTG+TGG | - | chr8_1:1712127-1712146 | Msa1171800:intron | 25.0% |
! | AAATTCATGAATTAAATGGC+AGG | - | chr8_1:1712236-1712255 | Msa1171800:intron | 25.0% |
! | AATTCATGAATTAAATGGCA+GGG | - | chr8_1:1712237-1712256 | Msa1171800:intron | 25.0% |
!! | GGCCATATATTATTGATTAT+TGG | - | chr8_1:1712360-1712379 | Msa1171800:intron | 25.0% |
!!! | CAGCAATTTTTAATTGATCA+GGG | - | chr8_1:1712490-1712509 | Msa1171800:intron | 25.0% |
! | TTTGTACATTTACTTTACTG+TGG | - | chr8_1:1712595-1712614 | Msa1171800:intron | 25.0% |
! | TGACTCAAATGAAAACTATT+AGG | - | chr8_1:1712774-1712793 | Msa1171800:intron | 25.0% |
! | GTAAACAAACAAAATAGCTT+CGG | - | chr8_1:1712894-1712913 | Msa1171800:intron | 25.0% |
! | TAAACAAACACAAATAGCTT+CGG | - | chr8_1:1712971-1712990 | Msa1171800:intron | 25.0% |
! | CTAATTGAAATTGTTTCACT+AGG | + | chr8_1:1713116-1713135 | None:intergenic | 25.0% |
!!! | AACTTCTTTTAAGTAGGTTA+TGG | + | chr8_1:1713158-1713177 | None:intergenic | 25.0% |
! | TGCTTTGTATATTTCAAGAA+GGG | + | chr8_1:1713181-1713200 | None:intergenic | 25.0% |
! | TTGCTTTGTATATTTCAAGA+AGG | + | chr8_1:1713182-1713201 | None:intergenic | 25.0% |
! | TGTTAGGAAAAAATAAGAAG+AGG | - | chr8_1:1713414-1713433 | Msa1171800:intron | 25.0% |
!! | GTATCTTGGAAATATCATTT+TGG | - | chr8_1:1713539-1713558 | Msa1171800:intron | 25.0% |
! | AAATTTCAAATTCTCAAGCA+TGG | + | chr8_1:1713750-1713769 | None:intergenic | 25.0% |
!! | CAAATCGTTTTCTAAATAAG+TGG | + | chr8_1:1714364-1714383 | None:intergenic | 25.0% |
! | CACTTATTTAGAAAACGATT+TGG | - | chr8_1:1714362-1714381 | Msa1171800:CDS | 25.0% |
! | TCTTATACTCAAATATATCC+TGG | - | chr8_1:1714546-1714565 | Msa1171800:intron | 25.0% |
! | CATATTTAGTCAAGTTCTAT+TGG | - | chr8_1:1714614-1714633 | Msa1171800:CDS | 25.0% |
! | AGTCTTATACATCGAAATCA+TGG | - | chr8_1:1706081-1706100 | Msa1171800:three_prime_UTR | 30.0% |
GTCTTATACATCGAAATCAT+GGG | - | chr8_1:1706082-1706101 | Msa1171800:three_prime_UTR | 30.0% | |
GTTAATCTTGATGAAGTGAT+TGG | + | chr8_1:1706141-1706160 | None:intergenic | 30.0% | |
! | GATGATGATGATGATACTTA+TGG | - | chr8_1:1706349-1706368 | Msa1171800:three_prime_UTR | 30.0% |
TAGCAAATTAGAGTTGAAAC+CGG | - | chr8_1:1706496-1706515 | Msa1171800:CDS | 30.0% | |
! | TCATAAGCTTGTTTGTACAA+AGG | + | chr8_1:1706584-1706603 | None:intergenic | 30.0% |
! | AAATTTTTGTACCTGCAAAC+GGG | + | chr8_1:1706629-1706648 | None:intergenic | 30.0% |
! | CAAATTTTTGTACCTGCAAA+CGG | + | chr8_1:1706630-1706649 | None:intergenic | 30.0% |
!! | AATGTTTGGTGATGAATGAT+AGG | - | chr8_1:1706697-1706716 | Msa1171800:intron | 30.0% |
! | CATAATTTGCAGTAGAATCA+TGG | + | chr8_1:1706863-1706882 | None:intergenic | 30.0% |
CATGATTCTACTGCAAATTA+TGG | - | chr8_1:1706861-1706880 | Msa1171800:intron | 30.0% | |
TAAGAAGAATCGTTACTATG+TGG | - | chr8_1:1706902-1706921 | Msa1171800:intron | 30.0% | |
AATAATTACCCCACAAACAA+TGG | + | chr8_1:1707108-1707127 | None:intergenic | 30.0% | |
! | TGATCCTTATTTATTCTTGG+TGG | - | chr8_1:1707196-1707215 | Msa1171800:intron | 30.0% |
! | GATCCTTATTTATTCTTGGT+GGG | - | chr8_1:1707197-1707216 | Msa1171800:intron | 30.0% |
AAACCCACCAAGAATAAATA+AGG | + | chr8_1:1707203-1707222 | None:intergenic | 30.0% | |
!! | ATCTCTTAGGTTTTTGGATT+GGG | + | chr8_1:1707414-1707433 | None:intergenic | 30.0% |
!! | AATCTCTTAGGTTTTTGGAT+TGG | + | chr8_1:1707415-1707434 | None:intergenic | 30.0% |
AATACAACATGGAATCTCTT+AGG | + | chr8_1:1707427-1707446 | None:intergenic | 30.0% | |
ACTAAAAAAGTTAGCGGTAA+AGG | + | chr8_1:1707474-1707493 | None:intergenic | 30.0% | |
AACCACACTAAAAAAGTTAG+CGG | + | chr8_1:1707480-1707499 | None:intergenic | 30.0% | |
ACTACCATGAATATTGTAGT+CGG | - | chr8_1:1707519-1707538 | Msa1171800:intron | 30.0% | |
!!! | GGATCGTTGATTTAATTTTG+TGG | + | chr8_1:1707872-1707891 | None:intergenic | 30.0% |
! | ATTTTTCGCATGACAAATGA+TGG | + | chr8_1:1707893-1707912 | None:intergenic | 30.0% |
TGCGAAAAATGATGTTTGAT+TGG | - | chr8_1:1707903-1707922 | Msa1171800:intron | 30.0% | |
GCGAAAAATGATGTTTGATT+GGG | - | chr8_1:1707904-1707923 | Msa1171800:intron | 30.0% | |
! | ATCTGCATTTAAAAAGCACA+TGG | + | chr8_1:1708051-1708070 | None:intergenic | 30.0% |
! | AAGAGGAATTGCTATCATTT+TGG | + | chr8_1:1708143-1708162 | None:intergenic | 30.0% |
! | GTTTTCTTAAAAAAGGGAAG+AGG | + | chr8_1:1708160-1708179 | None:intergenic | 30.0% |
TTGTAGAATTACCGAGTAAT+AGG | - | chr8_1:1708204-1708223 | Msa1171800:intron | 30.0% | |
GTAATAGGAAAAACTACATC+AGG | - | chr8_1:1708219-1708238 | Msa1171800:intron | 30.0% | |
AATAGGAAAAACTACATCAG+GGG | - | chr8_1:1708221-1708240 | Msa1171800:intron | 30.0% | |
CAATGATCATGTTCACAAAT+TGG | + | chr8_1:1708378-1708397 | None:intergenic | 30.0% | |
TGATGAGTTACATACTGTAA+TGG | - | chr8_1:1708506-1708525 | Msa1171800:intron | 30.0% | |
AAATGGTTAAGTAAGACTTC+TGG | - | chr8_1:1708587-1708606 | Msa1171800:intron | 30.0% | |
!! | CCAAACTTCATTTTTCATCT+AGG | + | chr8_1:1708620-1708639 | None:intergenic | 30.0% |
CCTAGATGAAAAATGAAGTT+TGG | - | chr8_1:1708617-1708636 | Msa1171800:intron | 30.0% | |
! | GTTTATCCTTTTTGTCAAGT+TGG | + | chr8_1:1708676-1708695 | None:intergenic | 30.0% |
! | GTGAAACTCAAGGAATATTT+TGG | + | chr8_1:1708765-1708784 | None:intergenic | 30.0% |
TGTGATTTCTGATAACAATC+TGG | + | chr8_1:1708856-1708875 | None:intergenic | 30.0% | |
! | ATGGGATAATTTAAGGCATT+TGG | + | chr8_1:1708968-1708987 | None:intergenic | 30.0% |
AAAATTGAACCCACACAAAA+TGG | - | chr8_1:1709352-1709371 | Msa1171800:intron | 30.0% | |
AAGAGCCTTAGTAAAATGTT+TGG | - | chr8_1:1709764-1709783 | Msa1171800:intron | 30.0% | |
TAGAACTTTATGTGCTAGTA+CGG | - | chr8_1:1709967-1709986 | Msa1171800:CDS | 30.0% | |
AATATTATGTTAACGGGGTT+TGG | - | chr8_1:1710004-1710023 | Msa1171800:CDS | 30.0% | |
!!! | AAAGACAGCTCTTTTTTATC+CGG | + | chr8_1:1710237-1710256 | None:intergenic | 30.0% |
AAAAAAGAGCTGTCTTTGTT+TGG | - | chr8_1:1710240-1710259 | Msa1171800:CDS | 30.0% | |
AACGACATATTTGTTCATCT+CGG | + | chr8_1:1710324-1710343 | None:intergenic | 30.0% | |
!!! | TATAATATGGTTGCTTTTGG+GGG | - | chr8_1:1710400-1710419 | Msa1171800:CDS | 30.0% |
GAAATAAGAAACAGAGAATG+GGG | - | chr8_1:1710457-1710476 | Msa1171800:CDS | 30.0% | |
AAGAACAGAAAGAAGATTTC+AGG | + | chr8_1:1710544-1710563 | None:intergenic | 30.0% | |
AATTGGTTGGATCTTGTAAA+AGG | - | chr8_1:1710822-1710841 | Msa1171800:intron | 30.0% | |
! | GCGAAAAATTCTTTTGTCAT+TGG | + | chr8_1:1710888-1710907 | None:intergenic | 30.0% |
ATACATTGCAGTTTCTGTTT+AGG | - | chr8_1:1711024-1711043 | Msa1171800:intron | 30.0% | |
TTCTCATAAATTACCACGAA+AGG | - | chr8_1:1711285-1711304 | Msa1171800:intron | 30.0% | |
TCTCATAAATTACCACGAAA+GGG | - | chr8_1:1711286-1711305 | Msa1171800:intron | 30.0% | |
GAATATGTTAAAGCACATAC+TGG | - | chr8_1:1711631-1711650 | Msa1171800:intron | 30.0% | |
ATATCCTTACGAGTTTCATT+AGG | - | chr8_1:1711697-1711716 | Msa1171800:intron | 30.0% | |
AGAATAAAAGAAACGATGCA+AGG | + | chr8_1:1711861-1711880 | None:intergenic | 30.0% | |
TGAATTATCACATTTGCTTC+AGG | + | chr8_1:1711911-1711930 | None:intergenic | 30.0% | |
TATTTCCCTGTTGTATGTTA+TGG | - | chr8_1:1712032-1712051 | Msa1171800:intron | 30.0% | |
AGTTACCATAACATACAACA+GGG | + | chr8_1:1712040-1712059 | None:intergenic | 30.0% | |
AAGTTACCATAACATACAAC+AGG | + | chr8_1:1712041-1712060 | None:intergenic | 30.0% | |
CATGAAATAAATGTGTACCT+GGG | + | chr8_1:1712337-1712356 | None:intergenic | 30.0% | |
ACATGAAATAAATGTGTACC+TGG | + | chr8_1:1712338-1712357 | None:intergenic | 30.0% | |
GTACACATTTATTTCATGTC+AGG | - | chr8_1:1712339-1712358 | Msa1171800:intron | 30.0% | |
ACTATCATTCAAGGAGTTTA+TGG | - | chr8_1:1712413-1712432 | Msa1171800:intron | 30.0% | |
AGATGTATTACTCAACTAAG+AGG | - | chr8_1:1712467-1712486 | Msa1171800:intron | 30.0% | |
!! | GCAGCAATTTTTAATTGATC+AGG | - | chr8_1:1712489-1712508 | Msa1171800:intron | 30.0% |
AAATTACCACAAGTGCAATA+GGG | + | chr8_1:1712556-1712575 | None:intergenic | 30.0% | |
ACAAATTCATGTGAATCTTG+AGG | + | chr8_1:1712580-1712599 | None:intergenic | 30.0% | |
AAGTTGTCAATGTGTTATCT+TGG | - | chr8_1:1712623-1712642 | Msa1171800:intron | 30.0% | |
AGTTGTCAATGTGTTATCTT+GGG | - | chr8_1:1712624-1712643 | Msa1171800:intron | 30.0% | |
! | AAAAGCTTTTACTCATTCAC+AGG | + | chr8_1:1713222-1713241 | None:intergenic | 30.0% |
!! | GTAAAAGCTTTTATTTGGTG+CGG | - | chr8_1:1713230-1713249 | Msa1171800:intron | 30.0% |
! | TACTATAACCAAAGTACTCT+AGG | - | chr8_1:1713258-1713277 | Msa1171800:intron | 30.0% |
!! | ATTAGGTTTGTTGAAGGAAA+TGG | - | chr8_1:1713286-1713305 | Msa1171800:intron | 30.0% |
AACATAAATTCCTCACAACA+TGG | + | chr8_1:1713398-1713417 | None:intergenic | 30.0% | |
TGTTGTGAGGAATTTATGTT+AGG | - | chr8_1:1713398-1713417 | Msa1171800:intron | 30.0% | |
GGAAAAAATAAGAAGAGGAA+TGG | - | chr8_1:1713419-1713438 | Msa1171800:intron | 30.0% | |
! | ATATTGAGAATTTGAGACTG+AGG | - | chr8_1:1713502-1713521 | Msa1171800:intron | 30.0% |
! | TATTGAGAATTTGAGACTGA+GGG | - | chr8_1:1713503-1713522 | Msa1171800:intron | 30.0% |
!! | TGGAAATATCATTTTGGTGT+TGG | - | chr8_1:1713545-1713564 | Msa1171800:intron | 30.0% |
!!! | TATCATTTTGGTGTTGGTTA+TGG | - | chr8_1:1713551-1713570 | Msa1171800:intron | 30.0% |
!!! | ATCATTTTGGTGTTGGTTAT+GGG | - | chr8_1:1713552-1713571 | Msa1171800:intron | 30.0% |
AGTAGCAATTAAAAGACAGA+AGG | + | chr8_1:1713637-1713656 | None:intergenic | 30.0% | |
AGTTGTCTTCATGCAATATT+TGG | + | chr8_1:1713674-1713693 | None:intergenic | 30.0% | |
AACTCAATTCCAATTCAACA+GGG | + | chr8_1:1713942-1713961 | None:intergenic | 30.0% | |
! | GTTGTTGATTGAAAACTAAC+TGG | - | chr8_1:1713959-1713978 | Msa1171800:CDS | 30.0% |
ATGACAATAATCAAGAATGC+AGG | - | chr8_1:1714454-1714473 | Msa1171800:intron | 30.0% | |
CAAGAGAAAGATTGTTATGA+TGG | - | chr8_1:1714692-1714711 | Msa1171800:intron | 30.0% | |
!! | ATATTTGCAGGTGCTGAAAA+AGG | - | chr8_1:1706186-1706205 | Msa1171800:three_prime_UTR | 35.0% |
GAAACTAACGAATTTAGCAG+CGG | + | chr8_1:1706235-1706254 | None:intergenic | 35.0% | |
AGAAAGTCTCAAGGAAAATG+CGG | + | chr8_1:1706559-1706578 | None:intergenic | 35.0% | |
! | AATCATCTCTTTAGGAAGCT+TGG | + | chr8_1:1706832-1706851 | None:intergenic | 35.0% |
AGCTTCCTAAAGAGATGATT+AGG | - | chr8_1:1706832-1706851 | Msa1171800:CDS | 35.0% | |
!! | CTACTTTTACCAATCATTGC+TGG | - | chr8_1:1706975-1706994 | Msa1171800:CDS | 35.0% |
GAAATCTTACCAGCAATGAT+TGG | + | chr8_1:1706987-1707006 | None:intergenic | 35.0% | |
ATTGCTGGTAAGATTTCATG+TGG | - | chr8_1:1706990-1707009 | Msa1171800:CDS | 35.0% | |
TGATCACATCCATTGTTTGT+GGG | - | chr8_1:1707096-1707115 | Msa1171800:intron | 35.0% | |
CATGTTTGAATAGCTTAGGT+CGG | - | chr8_1:1707131-1707150 | Msa1171800:intron | 35.0% | |
CAAATTACAGAGAGGTAACA+TGG | + | chr8_1:1707227-1707246 | None:intergenic | 35.0% | |
! | GGCCTGTTTTGTGTATAATA+TGG | - | chr8_1:1707294-1707313 | Msa1171800:intron | 35.0% |
! | CATGGAATCTCTTAGGTTTT+TGG | + | chr8_1:1707420-1707439 | None:intergenic | 35.0% |
!!! | TACCGCTAACTTTTTTAGTG+TGG | - | chr8_1:1707475-1707494 | Msa1171800:intron | 35.0% |
AAGACCGACTACAATATTCA+TGG | + | chr8_1:1707526-1707545 | None:intergenic | 35.0% | |
AACTACAATTGTATAGGGGA+TGG | + | chr8_1:1707574-1707593 | None:intergenic | 35.0% | |
CCTAAACAAAAACAGCAACA+GGG | + | chr8_1:1707603-1707622 | None:intergenic | 35.0% | |
!!! | CCTGTTGCTGTTTTTGTTTA+GGG | - | chr8_1:1707601-1707620 | Msa1171800:intron | 35.0% |
!! | GTTTTTGTTTAGGGTACTCA+TGG | - | chr8_1:1707610-1707629 | Msa1171800:intron | 35.0% |
! | TTTACAATCAGCAAAGCACT+AGG | - | chr8_1:1707640-1707659 | Msa1171800:intron | 35.0% |
CATGTCTCAGGAAAAGAAAA+TGG | - | chr8_1:1707932-1707951 | Msa1171800:intron | 35.0% | |
TGTAATGATGCATTCTTGTC+TGG | - | chr8_1:1708005-1708024 | Msa1171800:intron | 35.0% | |
GTAATGATGCATTCTTGTCT+GGG | - | chr8_1:1708006-1708025 | Msa1171800:intron | 35.0% | |
CATAGATGACAGTTGAAACA+GGG | + | chr8_1:1708112-1708131 | None:intergenic | 35.0% | |
TCATAGATGACAGTTGAAAC+AGG | + | chr8_1:1708113-1708132 | None:intergenic | 35.0% | |
AAAACAAATTCAGCAGTGCA+TGG | - | chr8_1:1708175-1708194 | Msa1171800:intron | 35.0% | |
ATAGGAAAAACTACATCAGG+GGG | - | chr8_1:1708222-1708241 | Msa1171800:intron | 35.0% | |
TGACGCGAAAAAAGTAAACA+AGG | + | chr8_1:1708283-1708302 | None:intergenic | 35.0% | |
!! | AGTGGACTAAGAATGAAAGT+AGG | + | chr8_1:1708348-1708367 | None:intergenic | 35.0% |
! | TCACAAATTGGTAGCAAAAG+TGG | + | chr8_1:1708366-1708385 | None:intergenic | 35.0% |
CACCAAAATTAGACTCTTGT+TGG | - | chr8_1:1708432-1708451 | Msa1171800:intron | 35.0% | |
! | TGCCAACAAGAGTCTAATTT+TGG | + | chr8_1:1708437-1708456 | None:intergenic | 35.0% |
AAAGGACCAACTTGACAAAA+AGG | - | chr8_1:1708667-1708686 | Msa1171800:intron | 35.0% | |
!!! | GTTTTTTGTCGTGAAACTCA+AGG | + | chr8_1:1708775-1708794 | None:intergenic | 35.0% |
AGAAATCACACTAGAGTAGT+TGG | - | chr8_1:1708866-1708885 | Msa1171800:CDS | 35.0% | |
TGCCTTAAATTATCCCATGT+TGG | - | chr8_1:1708970-1708989 | Msa1171800:intron | 35.0% | |
CTCCAACATGGGATAATTTA+AGG | + | chr8_1:1708975-1708994 | None:intergenic | 35.0% | |
CTTAAATTATCCCATGTTGG+AGG | - | chr8_1:1708973-1708992 | Msa1171800:intron | 35.0% | |
! | TCATGGTGTTGAAATCTTTG+AGG | - | chr8_1:1709039-1709058 | Msa1171800:intron | 35.0% |
! | TTGTGTGGGTTCAATTTTCA+AGG | + | chr8_1:1709350-1709369 | None:intergenic | 35.0% |
TCTAACACTCACTCTCTTAT+TGG | + | chr8_1:1709399-1709418 | None:intergenic | 35.0% | |
AATAAGAGAGTGAGTGTTAG+AGG | - | chr8_1:1709398-1709417 | Msa1171800:intron | 35.0% | |
ATAAGAGAGTGAGTGTTAGA+GGG | - | chr8_1:1709399-1709418 | Msa1171800:intron | 35.0% | |
CTTGTTAAATTTGGAGAACC+CGG | - | chr8_1:1709839-1709858 | Msa1171800:intron | 35.0% | |
TGTTGGAACAATACTGACAT+GGG | + | chr8_1:1709911-1709930 | None:intergenic | 35.0% | |
TTGTTGGAACAATACTGACA+TGG | + | chr8_1:1709912-1709931 | None:intergenic | 35.0% | |
ACAAGGTAGAACTATGATAC+CGG | + | chr8_1:1710176-1710195 | None:intergenic | 35.0% | |
!!! | AAGACAGCTCTTTTTTATCC+GGG | + | chr8_1:1710236-1710255 | None:intergenic | 35.0% |
! | GGGCTTTTCAGTTTAAACTA+TGG | - | chr8_1:1710290-1710309 | Msa1171800:intron | 35.0% |
AAAGAAGATTTCAGGCAAGA+AGG | + | chr8_1:1710536-1710555 | None:intergenic | 35.0% | |
ACTAAATCTCACTGCAAACT+TGG | - | chr8_1:1710636-1710655 | Msa1171800:CDS | 35.0% | |
CTAAATCTCACTGCAAACTT+GGG | - | chr8_1:1710637-1710656 | Msa1171800:CDS | 35.0% | |
ATTATTTCACTCAGCAGAAG+AGG | + | chr8_1:1710717-1710736 | None:intergenic | 35.0% | |
ACAGATCTGAACTTCCTAAT+TGG | - | chr8_1:1710780-1710799 | Msa1171800:intron | 35.0% | |
CAATTTGCCTCATACAGTTT+GGG | + | chr8_1:1710807-1710826 | None:intergenic | 35.0% | |
AAGATTTACATAGTTCCCAG+AGG | + | chr8_1:1710954-1710973 | None:intergenic | 35.0% | |
ACAGAAACTGCAATGTATCA+TGG | + | chr8_1:1711022-1711041 | None:intergenic | 35.0% | |
TGAATTCAAGCAAGTGAACT+AGG | + | chr8_1:1711114-1711133 | None:intergenic | 35.0% | |
TTGTTGATCATTACATGTGC+AGG | - | chr8_1:1711220-1711239 | Msa1171800:intron | 35.0% | |
TCACATGCTCGGAATTTATT+TGG | + | chr8_1:1711263-1711282 | None:intergenic | 35.0% | |
TTATGAGAAACTCACATGCT+CGG | + | chr8_1:1711274-1711293 | None:intergenic | 35.0% | |
CTTCGCAAACCAATGATATA+TGG | - | chr8_1:1711374-1711393 | Msa1171800:intron | 35.0% | |
CTTGTAGCACCATATATCAT+TGG | + | chr8_1:1711386-1711405 | None:intergenic | 35.0% | |
!! | CAATGATATATGGTGCTACA+AGG | - | chr8_1:1711384-1711403 | Msa1171800:intron | 35.0% |
!!! | GTCTTTTGAAGCTGTGTTTT+GGG | - | chr8_1:1711427-1711446 | Msa1171800:intron | 35.0% |
!!! | TCTTTTGAAGCTGTGTTTTG+GGG | - | chr8_1:1711428-1711447 | Msa1171800:intron | 35.0% |
! | GAATTTTTGTCCTCTCAACA+TGG | + | chr8_1:1711496-1711515 | None:intergenic | 35.0% |
TGAGAGGACAAAAATTCTAC+AGG | - | chr8_1:1711499-1711518 | Msa1171800:intron | 35.0% | |
AACAGTATTTACGTCTTTGC+TGG | + | chr8_1:1711534-1711553 | None:intergenic | 35.0% | |
CTAACCTAATGAAACTCGTA+AGG | + | chr8_1:1711704-1711723 | None:intergenic | 35.0% | |
! | GCATCGTTTCTTTTATTCTC+AGG | - | chr8_1:1711862-1711881 | Msa1171800:CDS | 35.0% |
! | CGTTTCTTTTATTCTCAGGT+TGG | - | chr8_1:1711866-1711885 | Msa1171800:CDS | 35.0% |
TTCAATATGTAGGATGGGTA+TGG | + | chr8_1:1712104-1712123 | None:intergenic | 35.0% | |
!! | ATTTGTTTGCTGTGGAAAGT+GGG | - | chr8_1:1712135-1712154 | Msa1171800:intron | 35.0% |
ATAAATGTGTACCTGGGTAT+CGG | + | chr8_1:1712331-1712350 | None:intergenic | 35.0% | |
CAAATTACCACAAGTGCAAT+AGG | + | chr8_1:1712557-1712576 | None:intergenic | 35.0% | |
GATAACACATTGACAACTTC+AGG | + | chr8_1:1712622-1712641 | None:intergenic | 35.0% | |
GTTGTCAATGTGTTATCTTG+GGG | - | chr8_1:1712625-1712644 | Msa1171800:intron | 35.0% | |
TTGGGGCAAGAATGATTATT+TGG | - | chr8_1:1712642-1712661 | Msa1171800:intron | 35.0% | |
TGGGGCAAGAATGATTATTT+GGG | - | chr8_1:1712643-1712662 | Msa1171800:intron | 35.0% | |
!! | GAAGGGAACTTCTTTTAAGT+AGG | + | chr8_1:1713164-1713183 | None:intergenic | 35.0% |
! | AATGTCTTCCTAGAGTACTT+TGG | + | chr8_1:1713269-1713288 | None:intergenic | 35.0% |
! | AAGTACTCTAGGAAGACATT+AGG | - | chr8_1:1713269-1713288 | Msa1171800:intron | 35.0% |
!! | GAAGACATTAGGTTTGTTGA+AGG | - | chr8_1:1713280-1713299 | Msa1171800:intron | 35.0% |
TTTAAGCCTGCAATCTCATT+TGG | + | chr8_1:1713346-1713365 | None:intergenic | 35.0% | |
AAATGAGATTGCAGGCTTAA+AGG | - | chr8_1:1713345-1713364 | Msa1171800:intron | 35.0% | |
AATGAGATTGCAGGCTTAAA+GGG | - | chr8_1:1713346-1713365 | Msa1171800:intron | 35.0% | |
ACAGAAGGATGAAGATTGAA+TGG | + | chr8_1:1713622-1713641 | None:intergenic | 35.0% | |
TCTTCATGCAATATTTGGCA+CGG | + | chr8_1:1713669-1713688 | None:intergenic | 35.0% | |
CAACTCAATTCCAATTCAAC+AGG | + | chr8_1:1713943-1713962 | None:intergenic | 35.0% | |
AAACCCTCGTGTGATTAAAA+AGG | - | chr8_1:1714393-1714412 | Msa1171800:intron | 35.0% | |
! | GTTCCTTTTTAATCACACGA+GGG | + | chr8_1:1714399-1714418 | None:intergenic | 35.0% |
GTGATTAAAAAGGAACCATG+CGG | - | chr8_1:1714403-1714422 | Msa1171800:intron | 35.0% | |
TCTCTTGTACTGTATATTCG+TGG | + | chr8_1:1714679-1714698 | None:intergenic | 35.0% | |
TACATCGAAATCATGGGACA+CGG | - | chr8_1:1706088-1706107 | Msa1171800:three_prime_UTR | 40.0% | |
!!! | CCTTTTTTGGAATCTTCCTG+TGG | + | chr8_1:1706322-1706341 | None:intergenic | 40.0% |
CCACAGGAAGATTCCAAAAA+AGG | - | chr8_1:1706319-1706338 | Msa1171800:three_prime_UTR | 40.0% | |
!!! | ATCATCGGCGAATCCTTTTT+TGG | + | chr8_1:1706335-1706354 | None:intergenic | 40.0% |
ATCACACAAATCGTCCTCTT+TGG | - | chr8_1:1706519-1706538 | Msa1171800:CDS | 40.0% | |
TCACACAAATCGTCCTCTTT+GGG | - | chr8_1:1706520-1706539 | Msa1171800:CDS | 40.0% | |
ACAAAGGTGAGAAAGTCTCA+AGG | + | chr8_1:1706568-1706587 | None:intergenic | 40.0% | |
! | CATTTACACACCTCTGGAAA+TGG | + | chr8_1:1706933-1706952 | None:intergenic | 40.0% |
TCACATCATTTACACACCTC+TGG | + | chr8_1:1706939-1706958 | None:intergenic | 40.0% | |
!! | AGGTATTGAAGACATTGCTC+AGG | - | chr8_1:1707032-1707051 | Msa1171800:intron | 40.0% |
! | GGTATTGAAGACATTGCTCA+GGG | - | chr8_1:1707033-1707052 | Msa1171800:intron | 40.0% |
GTGATCACATCCATTGTTTG+TGG | - | chr8_1:1707095-1707114 | Msa1171800:intron | 40.0% | |
GATCACATCCATTGTTTGTG+GGG | - | chr8_1:1707097-1707116 | Msa1171800:intron | 40.0% | |
AAAACAGGCCCAATAGTGAT+GGG | + | chr8_1:1707284-1707303 | None:intergenic | 40.0% | |
AGTACGAAAACCTATCCAAC+AGG | + | chr8_1:1707328-1707347 | None:intergenic | 40.0% | |
GATTCCATGTTGTATTCGAC+TGG | - | chr8_1:1707431-1707450 | Msa1171800:intron | 40.0% | |
GAAACCAGTCGAATACAACA+TGG | + | chr8_1:1707438-1707457 | None:intergenic | 40.0% | |
!! | GTATTCGACTGGTTTCTCAT+AGG | - | chr8_1:1707442-1707461 | Msa1171800:intron | 40.0% |
TTGCAGTTTATACACCCTCT+TGG | - | chr8_1:1707544-1707563 | Msa1171800:intron | 40.0% | |
TGCAGTTTATACACCCTCTT+GGG | - | chr8_1:1707545-1707564 | Msa1171800:intron | 40.0% | |
!!! | CCCTGTTGCTGTTTTTGTTT+AGG | - | chr8_1:1707600-1707619 | Msa1171800:intron | 40.0% |
CCCTAAACAAAAACAGCAAC+AGG | + | chr8_1:1707604-1707623 | None:intergenic | 40.0% | |
! | AAAGCACTAGGTGAGATTGA+AGG | - | chr8_1:1707652-1707671 | Msa1171800:intron | 40.0% |
GCTAAATCAAGCAGAAGTAG+CGG | - | chr8_1:1707690-1707709 | Msa1171800:intron | 40.0% | |
ATTCGAAATTGATCCTGCTC+AGG | - | chr8_1:1707741-1707760 | Msa1171800:intron | 40.0% | |
CAAATCTAGATTACCTGAGC+AGG | + | chr8_1:1707757-1707776 | None:intergenic | 40.0% | |
TAGGAAAAACTACATCAGGG+GGG | - | chr8_1:1708223-1708242 | Msa1171800:intron | 40.0% | |
AAGTCATACTCCTCCAACAT+GGG | + | chr8_1:1708986-1709005 | None:intergenic | 40.0% | |
! | GTGTTGCTAGCATTACTCAT+AGG | + | chr8_1:1709256-1709275 | None:intergenic | 40.0% |
ATTGAACCCACACAAAATGG+TGG | - | chr8_1:1709355-1709374 | Msa1171800:intron | 40.0% | |
TTGAACCCACACAAAATGGT+GGG | - | chr8_1:1709356-1709375 | Msa1171800:intron | 40.0% | |
! | TATGTCCCACCATTTTGTGT+GGG | + | chr8_1:1709364-1709383 | None:intergenic | 40.0% |
CTAAGGCTCTTCTCTTGATA+TGG | + | chr8_1:1709755-1709774 | None:intergenic | 40.0% | |
ATGTTTGGAAATGGTATGGC+TGG | - | chr8_1:1709779-1709798 | Msa1171800:intron | 40.0% | |
! | GGATTAGCATAACTTAGTGC+TGG | - | chr8_1:1710025-1710044 | Msa1171800:CDS | 40.0% |
! | GGTATCATAGTTCTACCTTG+TGG | - | chr8_1:1710175-1710194 | Msa1171800:intron | 40.0% |
CTGTTCTTATCCATCGTACA+TGG | - | chr8_1:1710556-1710575 | Msa1171800:CDS | 40.0% | |
GTTTATCATGCCATGTACGA+TGG | + | chr8_1:1710569-1710588 | None:intergenic | 40.0% | |
TCGTACATGGCATGATAAAC+AGG | - | chr8_1:1710569-1710588 | Msa1171800:CDS | 40.0% | |
! | ACTTTTCGAAACATATGGGC+AGG | + | chr8_1:1710606-1710625 | None:intergenic | 40.0% |
! | CATACAGTTTGGGACCAATT+AGG | + | chr8_1:1710797-1710816 | None:intergenic | 40.0% |
AATTGGTCCCAAACTGTATG+AGG | - | chr8_1:1710797-1710816 | Msa1171800:intron | 40.0% | |
CCAATTTGCCTCATACAGTT+TGG | + | chr8_1:1710808-1710827 | None:intergenic | 40.0% | |
CCAAACTGTATGAGGCAAAT+TGG | - | chr8_1:1710805-1710824 | Msa1171800:intron | 40.0% | |
ACTGTATGAGGCAAATTGGT+TGG | - | chr8_1:1710809-1710828 | Msa1171800:intron | 40.0% | |
TGGTTGGATCTTGTAAAAGG+TGG | - | chr8_1:1710825-1710844 | Msa1171800:intron | 40.0% | |
ATGTACAGTGTGCTGAAGTA+TGG | - | chr8_1:1710859-1710878 | Msa1171800:intron | 40.0% | |
!! | CATTGGTTTGCGAAGTTTCA+TGG | + | chr8_1:1711369-1711388 | None:intergenic | 40.0% |
!!! | CGTCTTTTGAAGCTGTGTTT+TGG | - | chr8_1:1711426-1711445 | Msa1171800:intron | 40.0% |
TCTCAACATGGCTGCAAATA+AGG | + | chr8_1:1711484-1711503 | None:intergenic | 40.0% | |
TTATTTGCAGCCATGTTGAG+AGG | - | chr8_1:1711483-1711502 | Msa1171800:intron | 40.0% | |
!! | ACTGGTCTAGCATTTTGTTG+AGG | - | chr8_1:1711649-1711668 | Msa1171800:intron | 40.0% |
ATTCAGATCTCTTCACATGC+TGG | - | chr8_1:1711926-1711945 | Msa1171800:intron | 40.0% | |
!! | CATTTGTTTGCTGTGGAAAG+TGG | - | chr8_1:1712134-1712153 | Msa1171800:intron | 40.0% |
! | TCAATAATGCCTTTTGCCAG+TGG | - | chr8_1:1712197-1712216 | Msa1171800:intron | 40.0% |
! | CAATAATGCCTTTTGCCAGT+GGG | - | chr8_1:1712198-1712217 | Msa1171800:intron | 40.0% |
!! | ATTGTGCTGCTTTCGTTTAC+AGG | - | chr8_1:1712444-1712463 | Msa1171800:intron | 40.0% |
TGATCAGGGTTACAGCTTTA+AGG | - | chr8_1:1712504-1712523 | Msa1171800:intron | 40.0% | |
AATTCCTCACAACATGGTCT+TGG | + | chr8_1:1713392-1713411 | None:intergenic | 40.0% | |
GAATGGAAAGAATGCTGATG+CGG | - | chr8_1:1713436-1713455 | Msa1171800:intron | 40.0% | |
CAGAGAACATTGTTCTCTGT+AGG | - | chr8_1:1713575-1713594 | Msa1171800:intron | 40.0% | |
CTTCATGCAATATTTGGCAC+GGG | + | chr8_1:1713668-1713687 | None:intergenic | 40.0% | |
AAAAAAACCTGCTCGAACTG+TGG | - | chr8_1:1713716-1713735 | Msa1171800:intron | 40.0% | |
AAATTCTCAAGCATGGCATC+GGG | + | chr8_1:1713743-1713762 | None:intergenic | 40.0% | |
CAAATTCTCAAGCATGGCAT+CGG | + | chr8_1:1713744-1713763 | None:intergenic | 40.0% | |
! | AGACCTTGGCAAGATAGTTT+TGG | + | chr8_1:1713783-1713802 | None:intergenic | 40.0% |
GCATGTATAGATTGAGACCT+TGG | + | chr8_1:1713797-1713816 | None:intergenic | 40.0% | |
TCATCATCTCGATGATCAAC+TGG | - | chr8_1:1713888-1713907 | Msa1171800:intron | 40.0% | |
CAATTCAACAGGGATACAGA+TGG | + | chr8_1:1713932-1713951 | None:intergenic | 40.0% | |
CATCTGTATCCCTGTTGAAT+TGG | - | chr8_1:1713930-1713949 | Msa1171800:CDS | 40.0% | |
!! | ACCTATCAGGTATTGAATGC+TGG | - | chr8_1:1713987-1714006 | Msa1171800:CDS | 40.0% |
ACCAGCATTCAATACCTGAT+AGG | + | chr8_1:1713991-1714010 | None:intergenic | 40.0% | |
TGCAAAAGGGATGGTTTATG+TGG | - | chr8_1:1714109-1714128 | Msa1171800:CDS | 40.0% | |
TGTCTCTTTGCTGGATCTTT+CGG | + | chr8_1:1714341-1714360 | None:intergenic | 40.0% | |
AATAAGTGGTGTCTCTTTGC+TGG | + | chr8_1:1714350-1714369 | None:intergenic | 40.0% | |
! | GGTTCCTTTTTAATCACACG+AGG | + | chr8_1:1714400-1714419 | None:intergenic | 40.0% |
ATTAAAAAGGAACCATGCGG+TGG | - | chr8_1:1714406-1714425 | Msa1171800:intron | 40.0% | |
AATCAAACATCAACCCTGTG+TGG | + | chr8_1:1714580-1714599 | None:intergenic | 40.0% | |
!!! | GCGGCTTTGAGCTTTTTGAA+GGG | + | chr8_1:1706216-1706235 | None:intergenic | 45.0% |
!!! | AGCGGCTTTGAGCTTTTTGA+AGG | + | chr8_1:1706217-1706236 | None:intergenic | 45.0% |
GTCGTCATCGTAAGCATCAT+CGG | + | chr8_1:1706377-1706396 | None:intergenic | 45.0% | |
GATGATGCTTACGATGACGA+CGG | - | chr8_1:1706376-1706395 | Msa1171800:three_prime_UTR | 45.0% | |
AGAGGACGATTTGTGTGATC+CGG | + | chr8_1:1706518-1706537 | None:intergenic | 45.0% | |
!! | TTGTATTCGTGCATCGACTC+TGG | + | chr8_1:1706723-1706742 | None:intergenic | 45.0% |
TGTGGAATCTCCATTTCCAG+AGG | - | chr8_1:1706920-1706939 | Msa1171800:intron | 45.0% | |
ATGATGCTATATCGCGAGCA+AGG | - | chr8_1:1707056-1707075 | Msa1171800:intron | 45.0% | |
CTGAAGCAACTCATCACCAT+GGG | + | chr8_1:1707172-1707191 | None:intergenic | 45.0% | |
ACTGAAGCAACTCATCACCA+TGG | + | chr8_1:1707173-1707192 | None:intergenic | 45.0% | |
TCTCCACACCCATCACTATT+GGG | - | chr8_1:1707273-1707292 | Msa1171800:intron | 45.0% | |
CAAAACAGGCCCAATAGTGA+TGG | + | chr8_1:1707285-1707304 | None:intergenic | 45.0% | |
AATATGGTTGGGTGACCTGT+TGG | - | chr8_1:1707310-1707329 | Msa1171800:intron | 45.0% | |
!!! | CTCTTACAGGCTGGTTTTGT+AGG | + | chr8_1:1707382-1707401 | None:intergenic | 45.0% |
ACAAAACCAGCCTGTAAGAG+TGG | - | chr8_1:1707382-1707401 | Msa1171800:intron | 45.0% | |
CAAAACCAGCCTGTAAGAGT+GGG | - | chr8_1:1707383-1707402 | Msa1171800:intron | 45.0% | |
! | GTTTAGGGTACTCATGGAGA+TGG | - | chr8_1:1707616-1707635 | Msa1171800:intron | 45.0% |
AGGAAAAACTACATCAGGGG+GGG | - | chr8_1:1708224-1708243 | Msa1171800:intron | 45.0% | |
GAAGTCATACTCCTCCAACA+TGG | + | chr8_1:1708987-1709006 | None:intergenic | 45.0% | |
! | GTATGTCCCACCATTTTGTG+TGG | + | chr8_1:1709365-1709384 | None:intergenic | 45.0% |
TTAGTTCCATCTCGAGGTCT+GGG | + | chr8_1:1709712-1709731 | None:intergenic | 45.0% | |
! | TTTAGTTCCATCTCGAGGTC+TGG | + | chr8_1:1709713-1709732 | None:intergenic | 45.0% |
! | CTTTTATCATCTGCCCCTTC+AGG | - | chr8_1:1710139-1710158 | Msa1171800:intron | 45.0% |
! | ATAGTTCTACCTTGTGGTGC+CGG | - | chr8_1:1710181-1710200 | Msa1171800:intron | 45.0% |
AACACCAACTAGGGACTTTC+CGG | + | chr8_1:1710203-1710222 | None:intergenic | 45.0% | |
AGCTGCTGAAACACCAACTA+GGG | + | chr8_1:1710212-1710231 | None:intergenic | 45.0% | |
AAGCTGCTGAAACACCAACT+AGG | + | chr8_1:1710213-1710232 | None:intergenic | 45.0% | |
!!! | TGGTTGCTTTTGGGGGTAAA+CGG | - | chr8_1:1710407-1710426 | Msa1171800:CDS | 45.0% |
! | AGAATGGGGATTGCTGCTTA+TGG | - | chr8_1:1710471-1710490 | Msa1171800:CDS | 45.0% |
ACAGGTATGCTGTTATGCAC+AGG | - | chr8_1:1710663-1710682 | Msa1171800:CDS | 45.0% | |
AGAGAACTCCAAGAAGAGAC+AGG | - | chr8_1:1710923-1710942 | Msa1171800:intron | 45.0% | |
ATGATCTTCACACATGCGCA+AGG | - | chr8_1:1711147-1711166 | Msa1171800:intron | 45.0% | |
GCGAAGTTTCATGGCATACT+CGG | + | chr8_1:1711360-1711379 | None:intergenic | 45.0% | |
!! | TCTCTTCACATGCTGGTTCA+AGG | - | chr8_1:1711933-1711952 | Msa1171800:intron | 45.0% |
TAAATGGCAGGGAAAGCTTC+AGG | - | chr8_1:1712248-1712267 | Msa1171800:intron | 45.0% | |
TGTTCGCCAAATGAGATTGC+AGG | - | chr8_1:1713337-1713356 | Msa1171800:intron | 45.0% | |
GATTGCAGGCTTAAAGGGAT+AGG | - | chr8_1:1713351-1713370 | Msa1171800:intron | 45.0% | |
! | AATTTGAGACTGAGGGAGAG+TGG | - | chr8_1:1713510-1713529 | Msa1171800:intron | 45.0% |
! | ATTTGAGACTGAGGGAGAGT+GGG | - | chr8_1:1713511-1713530 | Msa1171800:intron | 45.0% |
!!! | CCTTGGCAAGATAGTTTTGG+TGG | + | chr8_1:1713780-1713799 | None:intergenic | 45.0% |
CCACCAAAACTATCTTGCCA+AGG | - | chr8_1:1713777-1713796 | Msa1171800:CDS | 45.0% | |
! | GAGATGATGATAGTGCAAGC+GGG | + | chr8_1:1713878-1713897 | None:intergenic | 45.0% |
! | CGAGATGATGATAGTGCAAG+CGG | + | chr8_1:1713879-1713898 | None:intergenic | 45.0% |
GATGATCAACTGGCACTACT+CGG | - | chr8_1:1713898-1713917 | Msa1171800:intron | 45.0% | |
CTAACTGGCGTTTACCTATC+AGG | - | chr8_1:1713974-1713993 | Msa1171800:CDS | 45.0% | |
! | AATGCTGGTGATGATGCAGT+TGG | - | chr8_1:1714002-1714021 | Msa1171800:CDS | 45.0% |
!! | AAAAGTGCTCGTCGTTCTCA+AGG | - | chr8_1:1714065-1714084 | Msa1171800:CDS | 45.0% |
AGTGCAATGTCAGGTGCAAA+AGG | - | chr8_1:1714095-1714114 | Msa1171800:CDS | 45.0% | |
GTGCAATGTCAGGTGCAAAA+GGG | - | chr8_1:1714096-1714115 | Msa1171800:CDS | 45.0% | |
AATGTCAGGTGCAAAAGGGA+TGG | - | chr8_1:1714100-1714119 | Msa1171800:CDS | 45.0% | |
GGATGGTTTATGTGGAGTAC+AGG | - | chr8_1:1714117-1714136 | Msa1171800:CDS | 45.0% | |
ACTTGAGATGTACCAGCACA+CGG | + | chr8_1:1714181-1714200 | None:intergenic | 45.0% | |
! | CTGGTACATCTCAAGTTGCT+GGG | - | chr8_1:1714185-1714204 | Msa1171800:intron | 45.0% |
TTTCTTCCCCTATGCAGTAC+TGG | - | chr8_1:1714284-1714303 | Msa1171800:CDS | 45.0% | |
TTCTTCCCCTATGCAGTACT+GGG | - | chr8_1:1714285-1714304 | Msa1171800:CDS | 45.0% | |
!! | AAAAAAAAAAAACTATAAAT+AGG | + | chr8_1:1709212-1709231 | None:intergenic | 5.0% |
!!! | TTAAAAAAAAATACTTTTTT+CGG | - | chr8_1:1712944-1712963 | Msa1171800:intron | 5.0% |
CCATTGTCACAAGCCCAAAG+AGG | + | chr8_1:1706536-1706555 | None:intergenic | 50.0% | |
CCTCTTTGGGCTTGTGACAA+TGG | - | chr8_1:1706533-1706552 | Msa1171800:CDS | 50.0% | |
! | TTTGTACCTGCAAACGGGCT+CGG | + | chr8_1:1706624-1706643 | None:intergenic | 50.0% |
TTCGCTGTATGCTGCGGTTT+CGG | - | chr8_1:1706755-1706774 | Msa1171800:CDS | 50.0% | |
GCTGTCTGTCTCTATACCCA+TGG | - | chr8_1:1707153-1707172 | Msa1171800:intron | 50.0% | |
!!! | ATGGGTGTGGAGAGGTGTTT+TGG | + | chr8_1:1707266-1707285 | None:intergenic | 50.0% |
!! | CAATAGTGATGGGTGTGGAG+AGG | + | chr8_1:1707274-1707293 | None:intergenic | 50.0% |
CTCTCCACACCCATCACTAT+TGG | - | chr8_1:1707272-1707291 | Msa1171800:intron | 50.0% | |
TCTAACCCACTCTTACAGGC+TGG | + | chr8_1:1707391-1707410 | None:intergenic | 50.0% | |
TGGGTCTAACCCACTCTTAC+AGG | + | chr8_1:1707395-1707414 | None:intergenic | 50.0% | |
TAGGGGATGGAATCCCAAGA+GGG | + | chr8_1:1707561-1707580 | None:intergenic | 50.0% | |
ATAGGGGATGGAATCCCAAG+AGG | + | chr8_1:1707562-1707581 | None:intergenic | 50.0% | |
GATTGGGTCGTTCATGTCTC+AGG | - | chr8_1:1707920-1707939 | Msa1171800:intron | 50.0% | |
GGAAAAACTACATCAGGGGG+GGG | - | chr8_1:1708225-1708244 | Msa1171800:intron | 50.0% | |
TAAAGCCCCAAGCACAACCA+CGG | - | chr8_1:1709729-1709748 | Msa1171800:intron | 50.0% | |
ATATGGCCGTGGTTGTGCTT+GGG | + | chr8_1:1709738-1709757 | None:intergenic | 50.0% | |
CTCTTCTCTTGATATGGCCG+TGG | + | chr8_1:1709749-1709768 | None:intergenic | 50.0% | |
! | TATGGCTGGCAGCTTTTGCA+AGG | - | chr8_1:1709793-1709812 | Msa1171800:intron | 50.0% |
! | ATGGCTGGCAGCTTTTGCAA+GGG | - | chr8_1:1709794-1709813 | Msa1171800:intron | 50.0% |
! | TTTGCAAGGGCATGTGTCAC+TGG | - | chr8_1:1709807-1709826 | Msa1171800:intron | 50.0% |
GGATCTTGCTCTACCTGAAG+GGG | + | chr8_1:1710155-1710174 | None:intergenic | 50.0% | |
CGGATCTTGCTCTACCTGAA+GGG | + | chr8_1:1710156-1710175 | None:intergenic | 50.0% | |
CCTTCAGGTAGAGCAAGATC+CGG | - | chr8_1:1710154-1710173 | Msa1171800:intron | 50.0% | |
! | TTGGTGTTTCAGCAGCTTCC+CGG | - | chr8_1:1710215-1710234 | Msa1171800:CDS | 50.0% |
GACAGCAAAGAGAGATTCCG+TGG | - | chr8_1:1710352-1710371 | Msa1171800:intron | 50.0% | |
CAACAACTCCAGCGTTACCA+CGG | + | chr8_1:1710372-1710391 | None:intergenic | 50.0% | |
GCATGATAAACAGGTGCACG+TGG | - | chr8_1:1710578-1710597 | Msa1171800:CDS | 50.0% | |
TCACTCAGCAGAAGAGGCTT+TGG | + | chr8_1:1710711-1710730 | None:intergenic | 50.0% | |
TGCAGCTACACTTGTGAGAG+AGG | - | chr8_1:1710746-1710765 | Msa1171800:intron | 50.0% | |
AGGCTTCACCTGTCTCTTCT+TGG | + | chr8_1:1710934-1710953 | None:intergenic | 50.0% | |
AAGAGACAGGTGAAGCCTCT+GGG | - | chr8_1:1710936-1710955 | Msa1171800:intron | 50.0% | |
! | AATTACCACGAAAGGGCACG+TGG | - | chr8_1:1711293-1711312 | Msa1171800:intron | 50.0% |
!! | TATGGTGCTACAAGGTGCTG+TGG | - | chr8_1:1711392-1711411 | Msa1171800:intron | 50.0% |
AGCGTCTGGGTCGTATTCTT+AGG | - | chr8_1:1711969-1711988 | Msa1171800:intron | 50.0% | |
GCGTCTGGGTCGTATTCTTA+GGG | - | chr8_1:1711970-1711989 | Msa1171800:intron | 50.0% | |
GGGTCGTATTCTTAGGGCAA+AGG | - | chr8_1:1711976-1711995 | Msa1171800:intron | 50.0% | |
GGGAAAGCTTCAGGATAGGA+TGG | - | chr8_1:1712257-1712276 | Msa1171800:intron | 50.0% | |
AAGCTTCAGGATAGGATGGC+TGG | - | chr8_1:1712261-1712280 | Msa1171800:intron | 50.0% | |
CTCACTCCCTATTGCACTTG+TGG | - | chr8_1:1712547-1712566 | Msa1171800:intron | 50.0% | |
CTGTCCAAGACCATGTTGTG+AGG | - | chr8_1:1713385-1713404 | Msa1171800:intron | 50.0% | |
TGATGCGGCAGAGAGAGAAA+GGG | - | chr8_1:1713451-1713470 | Msa1171800:intron | 50.0% | |
AGCTTGCCTCCATCTGATGA+AGG | - | chr8_1:1713850-1713869 | Msa1171800:intron | 50.0% | |
AAGCGGGATCCTTCATCAGA+TGG | + | chr8_1:1713862-1713881 | None:intergenic | 50.0% | |
TCAACTGGCACTACTCGGAA+AGG | - | chr8_1:1713903-1713922 | Msa1171800:intron | 50.0% | |
GGATCGATGAGTGCAATGTC+AGG | - | chr8_1:1714086-1714105 | Msa1171800:CDS | 50.0% | |
ACGGCAGGCGTTATCATATC+AGG | + | chr8_1:1714162-1714181 | None:intergenic | 50.0% | |
! | GCTGGTACATCTCAAGTTGC+TGG | - | chr8_1:1714184-1714203 | Msa1171800:intron | 50.0% |
TTACGCCCAGTACTGCATAG+GGG | + | chr8_1:1714293-1714312 | None:intergenic | 50.0% | |
GTTACGCCCAGTACTGCATA+GGG | + | chr8_1:1714294-1714313 | None:intergenic | 50.0% | |
TGTTACGCCCAGTACTGCAT+AGG | + | chr8_1:1714295-1714314 | None:intergenic | 50.0% | |
! | TGCAGTACTGGGCGTAACAA+AGG | - | chr8_1:1714296-1714315 | Msa1171800:CDS | 50.0% |
! | TCGGCTTGCTCTTGATCTGT+TGG | + | chr8_1:1714322-1714341 | None:intergenic | 50.0% |
ATTATACAGACGCCACCGCA+TGG | + | chr8_1:1714421-1714440 | None:intergenic | 50.0% | |
AACATCAACCCTGTGTGGTG+AGG | + | chr8_1:1714575-1714594 | None:intergenic | 50.0% | |
ACCGCATTCGCTGTATGCTG+CGG | - | chr8_1:1706749-1706768 | Msa1171800:CDS | 55.0% | |
ACCGCAGCATACAGCGAATG+CGG | + | chr8_1:1706753-1706772 | None:intergenic | 55.0% | |
CTGTATGCTGCGGTTTCGGT+TGG | - | chr8_1:1706759-1706778 | Msa1171800:CDS | 55.0% | |
GCGAGCAAGGATCACTTCTG+AGG | - | chr8_1:1707069-1707088 | Msa1171800:intron | 55.0% | |
!! | AGGCCCAATAGTGATGGGTG+TGG | + | chr8_1:1707279-1707298 | None:intergenic | 55.0% |
GGTTGGGTGACCTGTTGGAT+AGG | - | chr8_1:1707315-1707334 | Msa1171800:intron | 55.0% | |
! | GGGGCTTTAGTTCCATCTCG+AGG | + | chr8_1:1709718-1709737 | None:intergenic | 55.0% |
TATGGCCGTGGTTGTGCTTG+GGG | + | chr8_1:1709737-1709756 | None:intergenic | 55.0% | |
GATATGGCCGTGGTTGTGCT+TGG | + | chr8_1:1709739-1709758 | None:intergenic | 55.0% | |
CCGGATCTTGCTCTACCTGA+AGG | + | chr8_1:1710157-1710176 | None:intergenic | 55.0% | |
GGCAACAAATGCCGTCTCTG+TGG | - | chr8_1:1710261-1710280 | Msa1171800:intron | 55.0% | |
ATGCCGTCTCTGTGGATCAG+TGG | - | chr8_1:1710269-1710288 | Msa1171800:intron | 55.0% | |
TGCCGTCTCTGTGGATCAGT+GGG | - | chr8_1:1710270-1710289 | Msa1171800:intron | 55.0% | |
AGCCCACTGATCCACAGAGA+CGG | + | chr8_1:1710275-1710294 | None:intergenic | 55.0% | |
! | GAGAGATTCCGTGGTAACGC+TGG | - | chr8_1:1710361-1710380 | Msa1171800:CDS | 55.0% |
! | GGGATTGCTGCTTATGGACG+AGG | - | chr8_1:1710477-1710496 | Msa1171800:CDS | 55.0% |
CACTGCAAACTTGGGCTCAC+AGG | - | chr8_1:1710645-1710664 | Msa1171800:CDS | 55.0% | |
GAAGAGACAGGTGAAGCCTC+TGG | - | chr8_1:1710935-1710954 | Msa1171800:intron | 55.0% | |
TATCACCACGTGCCCTTTCG+TGG | + | chr8_1:1711301-1711320 | None:intergenic | 55.0% | |
! | CGTCAAGAAGCACAGCGTCT+GGG | - | chr8_1:1711956-1711975 | Msa1171800:intron | 55.0% |
CAAGAGAGCCCACTGGCAAA+AGG | + | chr8_1:1712209-1712228 | None:intergenic | 55.0% | |
GAATCAGCAAGAGAGCCCAC+TGG | + | chr8_1:1712216-1712235 | None:intergenic | 55.0% | |
GGCAGGGAAAGCTTCAGGAT+AGG | - | chr8_1:1712253-1712272 | Msa1171800:intron | 55.0% | |
CTTCAGGATAGGATGGCTGG+TGG | - | chr8_1:1712264-1712283 | Msa1171800:intron | 55.0% | |
TAGGATGGCTGGTGGCAAAG+AGG | - | chr8_1:1712272-1712291 | Msa1171800:intron | 55.0% | |
!! | CTGGGTATCGGTCGACACAA+GGG | + | chr8_1:1712319-1712338 | None:intergenic | 55.0% |
CTGATGCGGCAGAGAGAGAA+AGG | - | chr8_1:1713450-1713469 | Msa1171800:intron | 55.0% | |
GATGCGGCAGAGAGAGAAAG+GGG | - | chr8_1:1713452-1713471 | Msa1171800:intron | 55.0% | |
TCTCTGTAGGAGCTCAGCTC+TGG | - | chr8_1:1713588-1713607 | Msa1171800:intron | 55.0% | |
CGGGATCCTTCATCAGATGG+AGG | + | chr8_1:1713859-1713878 | None:intergenic | 55.0% | |
CGAGGTCTGGGTTCACCTGT+AGG | + | chr8_1:1709700-1709719 | None:intergenic | 60.0% | |
GGTGAACCCAGACCTCGAGA+TGG | - | chr8_1:1709703-1709722 | Msa1171800:intron | 60.0% | |
AGGGACTTTCCGGCACCACA+AGG | + | chr8_1:1710193-1710212 | None:intergenic | 60.0% | |
! | GGTGCCGGAAAGTCCCTAGT+TGG | - | chr8_1:1710196-1710215 | Msa1171800:CDS | 60.0% |
! | GCGTCAAGAAGCACAGCGTC+TGG | - | chr8_1:1711955-1711974 | Msa1171800:intron | 60.0% |
!! | CCTGGGTATCGGTCGACACA+AGG | + | chr8_1:1712320-1712339 | None:intergenic | 60.0% |
! | CCTTGTGTCGACCGATACCC+AGG | - | chr8_1:1712317-1712336 | Msa1171800:intron | 60.0% |
TGAGACTGAGGGAGAGTGGG+AGG | - | chr8_1:1713514-1713533 | Msa1171800:intron | 60.0% | |
GAGACTGAGGGAGAGTGGGA+GGG | - | chr8_1:1713515-1713534 | Msa1171800:intron | 60.0% | |
AGACTGAGGGAGAGTGGGAG+GGG | - | chr8_1:1713516-1713535 | Msa1171800:intron | 60.0% | |
!! | GAGAGTGGGAGGGGGTATCT+TGG | - | chr8_1:1713525-1713544 | Msa1171800:intron | 60.0% |
ATCGGGACCACAGTTCGAGC+AGG | + | chr8_1:1713726-1713745 | None:intergenic | 60.0% | |
! | TGATAACGCCTGCCGTGTGC+TGG | - | chr8_1:1714166-1714185 | Msa1171800:intron | 60.0% |
GAGATGTACCAGCACACGGC+AGG | + | chr8_1:1714177-1714196 | None:intergenic | 60.0% | |
TCCTGGTGACCTCACCACAC+AGG | - | chr8_1:1714563-1714582 | Msa1171800:intron | 60.0% | |
CCTGGTGACCTCACCACACA+GGG | - | chr8_1:1714564-1714583 | Msa1171800:intron | 60.0% | |
GACTGAGGGAGAGTGGGAGG+GGG | - | chr8_1:1713517-1713536 | Msa1171800:intron | 65.0% | |
CCCTGTGTGGTGAGGTCACC+AGG | + | chr8_1:1714567-1714586 | None:intergenic | 65.0% | |
! | CCTGCAAACGGGCTCGGCGA+TGG | + | chr8_1:1706618-1706637 | None:intergenic | 70.0% |
CCATCGCCGAGCCCGTTTGC+AGG | - | chr8_1:1706615-1706634 | Msa1171800:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 1706079 | 1714779 | 1706079 | ID=Msa1171800;Name=Msa1171800 |
chr8_1 | mRNA | 1706079 | 1714779 | 1706079 | ID=Msa1171800-mRNA-1;Parent=Msa1171800;Name=Msa1171800-mRNA-1;_AED=0.15;_eAED=0.15;_QI=21|0.94|0.95|1|1|1|20|385|767 |
chr8_1 | exon | 1706079 | 1706557 | 1706079 | ID=Msa1171800-mRNA-1:exon:663;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1706720 | 1706862 | 1706720 | ID=Msa1171800-mRNA-1:exon:662;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1706934 | 1707017 | 1706934 | ID=Msa1171800-mRNA-1:exon:661;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1708333 | 1708392 | 1708333 | ID=Msa1171800-mRNA-1:exon:660;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1708520 | 1708600 | 1708520 | ID=Msa1171800-mRNA-1:exon:659;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1708861 | 1708974 | 1708861 | ID=Msa1171800-mRNA-1:exon:658;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1709293 | 1709365 | 1709293 | ID=Msa1171800-mRNA-1:exon:657;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1709453 | 1709616 | 1709453 | ID=Msa1171800-mRNA-1:exon:656;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1709914 | 1710107 | 1709914 | ID=Msa1171800-mRNA-1:exon:655;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1710192 | 1710267 | 1710192 | ID=Msa1171800-mRNA-1:exon:654;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1710360 | 1710697 | 1710360 | ID=Msa1171800-mRNA-1:exon:653;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1711067 | 1711154 | 1711067 | ID=Msa1171800-mRNA-1:exon:652;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1711840 | 1711920 | 1711840 | ID=Msa1171800-mRNA-1:exon:651;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1713096 | 1713236 | 1713096 | ID=Msa1171800-mRNA-1:exon:650;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1713768 | 1713824 | 1713768 | ID=Msa1171800-mRNA-1:exon:649;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1713917 | 1714139 | 1713917 | ID=Msa1171800-mRNA-1:exon:648;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1714222 | 1714381 | 1714222 | ID=Msa1171800-mRNA-1:exon:647;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1714461 | 1714533 | 1714461 | ID=Msa1171800-mRNA-1:exon:646;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1714613 | 1714662 | 1714613 | ID=Msa1171800-mRNA-1:exon:645;Parent=Msa1171800-mRNA-1 |
chr8_1 | exon | 1714749 | 1714779 | 1714749 | ID=Msa1171800-mRNA-1:exon:644;Parent=Msa1171800-mRNA-1 |
chr8_1 | five_prime_UTR | 1714759 | 1714779 | 1714759 | ID=Msa1171800-mRNA-1:five_prime_utr;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1714749 | 1714758 | 1714749 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1714613 | 1714662 | 1714613 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1714461 | 1714533 | 1714461 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1714222 | 1714381 | 1714222 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1713917 | 1714139 | 1713917 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1713768 | 1713824 | 1713768 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1713096 | 1713236 | 1713096 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1711840 | 1711920 | 1711840 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1711067 | 1711154 | 1711067 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1710360 | 1710697 | 1710360 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1710192 | 1710267 | 1710192 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1709914 | 1710107 | 1709914 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1709453 | 1709616 | 1709453 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1709293 | 1709365 | 1709293 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1708861 | 1708974 | 1708861 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1708520 | 1708600 | 1708520 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1708333 | 1708392 | 1708333 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1706934 | 1707017 | 1706934 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1706720 | 1706862 | 1706720 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | CDS | 1706464 | 1706557 | 1706464 | ID=Msa1171800-mRNA-1:cds;Parent=Msa1171800-mRNA-1 |
chr8_1 | three_prime_UTR | 1706079 | 1706463 | 1706079 | ID=Msa1171800-mRNA-1:three_prime_utr;Parent=Msa1171800-mRNA-1 |
Gene Sequence |
Protein sequence |