Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344870 | XP_003603229.1 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344870 | sp|Q7MPY0|BIOH_VIBVY | 28.519 | 270 | 165 | 10 | 36 | 297 | 3 | 252 | 1.58e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344870 | G7J939 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0344870 | -0.831011 | 2.125464e-55 | -8.615850e-47 |
| Msa0007080 | Msa0344870 | 0.808285 | 3.339421e-50 | -8.615850e-47 |
| Msa0014710 | Msa0344870 | 0.831024 | 2.109900e-55 | -8.615850e-47 |
| Msa0032610 | Msa0344870 | 0.811461 | 6.922001e-51 | -8.615850e-47 |
| Msa0039330 | Msa0344870 | 0.844405 | 7.713988e-59 | -8.615850e-47 |
| Msa0043730 | Msa0344870 | 0.833603 | 4.850392e-56 | -8.615850e-47 |
| Msa0048000 | Msa0344870 | 0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa0050730 | Msa0344870 | 0.808371 | 3.200901e-50 | -8.615850e-47 |
| Msa0050760 | Msa0344870 | 0.810556 | 1.086780e-50 | -8.615850e-47 |
| Msa0069260 | Msa0344870 | 0.800331 | 1.515553e-48 | -8.615850e-47 |
| Msa0069310 | Msa0344870 | 0.823754 | 1.168306e-53 | -8.615850e-47 |
| Msa0071240 | Msa0344870 | 0.805646 | 1.207182e-49 | -8.615850e-47 |
| Msa0076670 | Msa0344870 | 0.804656 | 1.945713e-49 | -8.615850e-47 |
| Msa0077610 | Msa0344870 | 0.800999 | 1.107223e-48 | -8.615850e-47 |
| Msa0078610 | Msa0344870 | 0.810008 | 1.426693e-50 | -8.615850e-47 |
| Msa0078660 | Msa0344870 | 0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0085360 | Msa0344870 | -0.812638 | 3.833180e-51 | -8.615850e-47 |
| Msa0085720 | Msa0344870 | 0.811239 | 7.732472e-51 | -8.615850e-47 |
| Msa0090100 | Msa0344870 | 0.818128 | 2.303775e-52 | -8.615850e-47 |
| Msa0092990 | Msa0344870 | 0.830122 | 3.508113e-55 | -8.615850e-47 |
| Msa0101810 | Msa0344870 | -0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0102120 | Msa0344870 | 0.801433 | 9.025920e-49 | -8.615850e-47 |
| Msa0102750 | Msa0344870 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
| Msa0105420 | Msa0344870 | 0.809633 | 1.718116e-50 | -8.615850e-47 |
| Msa0115810 | Msa0344870 | 0.805007 | 1.643572e-49 | -8.615850e-47 |
| Msa0119850 | Msa0344870 | 0.809195 | 2.133270e-50 | -8.615850e-47 |
| Msa0120340 | Msa0344870 | 0.820778 | 5.730892e-53 | -8.615850e-47 |
| Msa0124550 | Msa0344870 | 0.804818 | 1.799513e-49 | -8.615850e-47 |
| Msa0126380 | Msa0344870 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0135380 | Msa0344870 | 0.808340 | 3.249651e-50 | -8.615850e-47 |
| Msa0135820 | Msa0344870 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0137570 | Msa0344870 | 0.819827 | 9.465617e-53 | -8.615850e-47 |
| Msa0140390 | Msa0344870 | 0.810235 | 1.274904e-50 | -8.615850e-47 |
| Msa0148120 | Msa0344870 | 0.826042 | 3.371032e-54 | -8.615850e-47 |
| Msa0156650 | Msa0344870 | -0.823080 | 1.678841e-53 | -8.615850e-47 |
| Msa0159770 | Msa0344870 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0163780 | Msa0344870 | 0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0165970 | Msa0344870 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
| Msa0170140 | Msa0344870 | 0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa0172780 | Msa0344870 | 0.820956 | 5.214551e-53 | -8.615850e-47 |
| Msa0173990 | Msa0344870 | 0.819706 | 1.008879e-52 | -8.615850e-47 |
| Msa0177700 | Msa0344870 | -0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0182570 | Msa0344870 | 0.834249 | 3.342737e-56 | -8.615850e-47 |
| Msa0183590 | Msa0344870 | 0.813376 | 2.641720e-51 | -8.615850e-47 |
| Msa0188630 | Msa0344870 | 0.837058 | 6.503088e-57 | -8.615850e-47 |
| Msa0197660 | Msa0344870 | 0.813602 | 2.355079e-51 | -8.615850e-47 |
| Msa0199800 | Msa0344870 | -0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0208110 | Msa0344870 | 0.808363 | 3.213778e-50 | -8.615850e-47 |
| Msa0208630 | Msa0344870 | 0.802389 | 5.742423e-49 | -8.615850e-47 |
| Msa0210450 | Msa0344870 | 0.800712 | 1.267036e-48 | -8.615850e-47 |
| Msa0217400 | Msa0344870 | 0.812220 | 4.729469e-51 | -8.615850e-47 |
| Msa0223100 | Msa0344870 | 0.832419 | 9.556955e-56 | -8.615850e-47 |
| Msa0223290 | Msa0344870 | 0.848002 | 8.085961e-60 | -8.615850e-47 |
| Msa0223380 | Msa0344870 | 0.854397 | 1.265187e-61 | -8.615850e-47 |
| Msa0233610 | Msa0344870 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0239800 | Msa0344870 | 0.816493 | 5.375592e-52 | -8.615850e-47 |
| Msa0258760 | Msa0344870 | 0.806718 | 7.178929e-50 | -8.615850e-47 |
| Msa0260810 | Msa0344870 | 0.800363 | 1.492464e-48 | -8.615850e-47 |
| Msa0265380 | Msa0344870 | 0.859588 | 3.727760e-63 | -8.615850e-47 |
| Msa0266000 | Msa0344870 | -0.833690 | 4.613936e-56 | -8.615850e-47 |
| Msa0268090 | Msa0344870 | 0.846376 | 2.257509e-59 | -8.615850e-47 |
| Msa0269450 | Msa0344870 | 0.841631 | 4.227036e-58 | -8.615850e-47 |
| Msa0270270 | Msa0344870 | 0.823684 | 1.213451e-53 | -8.615850e-47 |
| Msa0276920 | Msa0344870 | 0.817510 | 3.176156e-52 | -8.615850e-47 |
| Msa0279790 | Msa0344870 | 0.800168 | 1.635591e-48 | -8.615850e-47 |
| Msa0282250 | Msa0344870 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0288730 | Msa0344870 | 0.827405 | 1.592966e-54 | -8.615850e-47 |
| Msa0296160 | Msa0344870 | 0.808299 | 3.315344e-50 | -8.615850e-47 |
| Msa0296760 | Msa0344870 | 0.803362 | 3.614473e-49 | -8.615850e-47 |
| Msa0302650 | Msa0344870 | 0.823727 | 1.185091e-53 | -8.615850e-47 |
| Msa0303360 | Msa0344870 | 0.859923 | 2.955044e-63 | -8.615850e-47 |
| Msa0305890 | Msa0344870 | 0.808209 | 3.466215e-50 | -8.615850e-47 |
| Msa0307830 | Msa0344870 | -0.806500 | 7.983573e-50 | -8.615850e-47 |
| Msa0311860 | Msa0344870 | 0.800407 | 1.462362e-48 | -8.615850e-47 |
| Msa0312310 | Msa0344870 | 0.834361 | 3.133159e-56 | -8.615850e-47 |
| Msa0317510 | Msa0344870 | 0.820738 | 5.853689e-53 | -8.615850e-47 |
| Msa0319130 | Msa0344870 | 0.814753 | 1.312261e-51 | -8.615850e-47 |
| Msa0320100 | Msa0344870 | 0.812041 | 5.175093e-51 | -8.615850e-47 |
| Msa0323080 | Msa0344870 | 0.819974 | 8.761593e-53 | -8.615850e-47 |
| Msa0326670 | Msa0344870 | 0.812128 | 4.954169e-51 | -8.615850e-47 |
| Msa0333720 | Msa0344870 | -0.854719 | 1.020543e-61 | -8.615850e-47 |
| Msa0334350 | Msa0344870 | 0.803703 | 3.071135e-49 | -8.615850e-47 |
| Msa0334570 | Msa0344870 | 0.811867 | 5.646552e-51 | -8.615850e-47 |
| Msa0335040 | Msa0344870 | 0.829184 | 5.933294e-55 | -8.615850e-47 |
| Msa0340810 | Msa0344870 | 0.804377 | 2.223935e-49 | -8.615850e-47 |
| Msa0342100 | Msa0344870 | 0.812225 | 4.719774e-51 | -8.615850e-47 |
| Msa0344830 | Msa0344870 | 0.836067 | 1.162671e-56 | -8.615850e-47 |
| Msa0344870 | Msa0347360 | 0.824074 | 9.827871e-54 | -8.615850e-47 |
| Msa0344870 | Msa0350990 | 0.814154 | 1.779917e-51 | -8.615850e-47 |
| Msa0344870 | Msa0351030 | 0.823634 | 1.246053e-53 | -8.615850e-47 |
| Msa0344870 | Msa0351080 | 0.831454 | 1.654422e-55 | -8.615850e-47 |
| Msa0344870 | Msa0351100 | 0.803604 | 3.220746e-49 | -8.615850e-47 |
| Msa0344870 | Msa0351810 | 0.800898 | 1.161245e-48 | -8.615850e-47 |
| Msa0344870 | Msa0356890 | -0.845664 | 3.527704e-59 | -8.615850e-47 |
| Msa0344870 | Msa0365490 | 0.849969 | 2.297747e-60 | -8.615850e-47 |
| Msa0344870 | Msa0376590 | 0.828977 | 6.659683e-55 | -8.615850e-47 |
| Msa0344870 | Msa0377530 | 0.862703 | 4.200452e-64 | -8.615850e-47 |
| Msa0344870 | Msa0378380 | 0.810838 | 9.446732e-51 | -8.615850e-47 |
| Msa0344870 | Msa0379640 | 0.822910 | 1.839281e-53 | -8.615850e-47 |
| Msa0344870 | Msa0380040 | 0.827293 | 1.694624e-54 | -8.615850e-47 |
| Msa0344870 | Msa0381620 | -0.810005 | 1.429368e-50 | -8.615850e-47 |
| Msa0344870 | Msa0382130 | 0.870928 | 1.006766e-66 | -8.615850e-47 |
| Msa0344870 | Msa0388030 | -0.857830 | 1.249248e-62 | -8.615850e-47 |
| Msa0344870 | Msa0388040 | -0.816997 | 4.143370e-52 | -8.615850e-47 |
| Msa0344870 | Msa0389810 | 0.847876 | 8.761055e-60 | -8.615850e-47 |
| Msa0344870 | Msa0393950 | 0.837314 | 5.591542e-57 | -8.615850e-47 |
| Msa0344870 | Msa0394410 | -0.807789 | 4.257047e-50 | -8.615850e-47 |
| Msa0344870 | Msa0399340 | 0.804521 | 2.076210e-49 | -8.615850e-47 |
| Msa0344870 | Msa0404000 | 0.801964 | 7.021831e-49 | -8.615850e-47 |
| Msa0344870 | Msa0404030 | 0.812428 | 4.260275e-51 | -8.615850e-47 |
| Msa0344870 | Msa0409200 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
| Msa0344870 | Msa0414950 | -0.800920 | 1.149131e-48 | -8.615850e-47 |
| Msa0344870 | Msa0421780 | -0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0344870 | Msa0426330 | 0.805203 | 1.494850e-49 | -8.615850e-47 |
| Msa0344870 | Msa0427910 | 0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0344870 | Msa0429290 | 0.832632 | 8.461744e-56 | -8.615850e-47 |
| Msa0344870 | Msa0431670 | 0.901300 | 3.081793e-78 | -8.615850e-47 |
| Msa0344870 | Msa0432770 | 0.807726 | 4.390786e-50 | -8.615850e-47 |
| Msa0344870 | Msa0442200 | 0.812937 | 3.297650e-51 | -8.615850e-47 |
| Msa0344870 | Msa0442850 | 0.849972 | 2.293769e-60 | -8.615850e-47 |
| Msa0344870 | Msa0443920 | 0.809888 | 1.514263e-50 | -8.615850e-47 |
| Msa0344870 | Msa0445280 | 0.838334 | 3.059351e-57 | -8.615850e-47 |
| Msa0344870 | Msa0448550 | -0.825839 | 3.766942e-54 | -8.615850e-47 |
| Msa0344870 | Msa0458440 | 0.842183 | 3.021818e-58 | -8.615850e-47 |
| Msa0344870 | Msa0464900 | 0.871999 | 4.453375e-67 | -8.615850e-47 |
| Msa0344870 | Msa0465680 | -0.810274 | 1.250423e-50 | -8.615850e-47 |
| Msa0344870 | Msa0466280 | 0.812380 | 4.365097e-51 | -8.615850e-47 |
| Msa0344870 | Msa0466390 | 0.820389 | 7.039447e-53 | -8.615850e-47 |
| Msa0344870 | Msa0467900 | -0.839204 | 1.822481e-57 | -8.615850e-47 |
| Msa0344870 | Msa0467960 | -0.811558 | 6.594540e-51 | -8.615850e-47 |
| Msa0344870 | Msa0468130 | 0.855675 | 5.382250e-62 | -8.615850e-47 |
| Msa0344870 | Msa0473240 | 0.895654 | 7.800550e-76 | -8.615850e-47 |
| Msa0344870 | Msa0475580 | 0.835864 | 1.309207e-56 | -8.615850e-47 |
| Msa0344870 | Msa0480320 | 0.811485 | 6.839778e-51 | -8.615850e-47 |
| Msa0344870 | Msa0480600 | 0.830938 | 2.215491e-55 | -8.615850e-47 |
| Msa0344870 | Msa0484780 | 0.827271 | 1.715327e-54 | -8.615850e-47 |
| Msa0344870 | Msa0489610 | 0.821019 | 5.044536e-53 | -8.615850e-47 |
| Msa0344870 | Msa0491520 | 0.822462 | 2.338880e-53 | -8.615850e-47 |
| Msa0344870 | Msa0504410 | 0.804279 | 2.331233e-49 | -8.615850e-47 |
| Msa0344870 | Msa0505060 | 0.838498 | 2.774859e-57 | -8.615850e-47 |
| Msa0344870 | Msa0506890 | 0.805416 | 1.349105e-49 | -8.615850e-47 |
| Msa0344870 | Msa0516370 | 0.832012 | 1.205130e-55 | -8.615850e-47 |
| Msa0344870 | Msa0517490 | 0.874638 | 5.774205e-68 | -8.615850e-47 |
| Msa0344870 | Msa0519190 | 0.902788 | 6.770708e-79 | -8.615850e-47 |
| Msa0344870 | Msa0519220 | 0.834014 | 3.829277e-56 | -8.615850e-47 |
| Msa0344870 | Msa0526410 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
| Msa0344870 | Msa0526890 | 0.831847 | 1.323180e-55 | -8.615850e-47 |
| Msa0344870 | Msa0530650 | 0.802305 | 5.976168e-49 | -8.615850e-47 |
| Msa0344870 | Msa0531990 | -0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0344870 | Msa0532100 | -0.803413 | 3.528445e-49 | -8.615850e-47 |
| Msa0344870 | Msa0532540 | 0.820249 | 7.578599e-53 | -8.615850e-47 |
| Msa0344870 | Msa0535030 | 0.810681 | 1.021171e-50 | -8.615850e-47 |
| Msa0344870 | Msa0535060 | 0.816727 | 4.763703e-52 | -8.615850e-47 |
| Msa0344870 | Msa0540070 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
| Msa0344870 | Msa0542160 | 0.805075 | 1.590143e-49 | -8.615850e-47 |
| Msa0344870 | Msa0547400 | 0.838803 | 2.314726e-57 | -8.615850e-47 |
| Msa0344870 | Msa0553220 | -0.806411 | 8.332789e-50 | -8.615850e-47 |
| Msa0344870 | Msa0553460 | 0.831572 | 1.546844e-55 | -8.615850e-47 |
| Msa0344870 | Msa0558690 | 0.842740 | 2.149823e-58 | -8.615850e-47 |
| Msa0344870 | Msa0562440 | 0.807609 | 4.650539e-50 | -8.615850e-47 |
| Msa0344870 | Msa0567020 | 0.839114 | 1.922401e-57 | -8.615850e-47 |
| Msa0344870 | Msa0580000 | 0.816934 | 4.280508e-52 | -8.615850e-47 |
| Msa0344870 | Msa0587190 | 0.817048 | 4.036712e-52 | -8.615850e-47 |
| Msa0344870 | Msa0589390 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0344870 | Msa0591770 | 0.801224 | 9.961743e-49 | -8.615850e-47 |
| Msa0344870 | Msa0598460 | 0.828003 | 1.144758e-54 | -8.615850e-47 |
| Msa0344870 | Msa0599580 | 0.836384 | 9.658704e-57 | -8.615850e-47 |
| Msa0344870 | Msa0602120 | 0.808807 | 2.583689e-50 | -8.615850e-47 |
| Msa0344870 | Msa0607540 | 0.809432 | 1.897327e-50 | -8.615850e-47 |
| Msa0344870 | Msa0608710 | 0.818032 | 2.421490e-52 | -8.615850e-47 |
| Msa0344870 | Msa0613460 | 0.817896 | 2.599046e-52 | -8.615850e-47 |
| Msa0344870 | Msa0620960 | 0.807404 | 5.138587e-50 | -8.615850e-47 |
| Msa0344870 | Msa0621590 | 0.828760 | 7.513606e-55 | -8.615850e-47 |
| Msa0344870 | Msa0623080 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
| Msa0344870 | Msa0626220 | 0.819885 | 9.183505e-53 | -8.615850e-47 |
| Msa0344870 | Msa0626990 | 0.800704 | 1.271945e-48 | -8.615850e-47 |
| Msa0344870 | Msa0629650 | 0.809146 | 2.185977e-50 | -8.615850e-47 |
| Msa0344870 | Msa0638070 | 0.817681 | 2.907087e-52 | -8.615850e-47 |
| Msa0344870 | Msa0638280 | 0.847178 | 1.363106e-59 | -8.615850e-47 |
| Msa0344870 | Msa0638320 | 0.854989 | 8.520579e-62 | -8.615850e-47 |
| Msa0344870 | Msa0643250 | 0.804174 | 2.451490e-49 | -8.615850e-47 |
| Msa0344870 | Msa0647450 | -0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0344870 | Msa0647830 | 0.833137 | 6.337344e-56 | -8.615850e-47 |
| Msa0344870 | Msa0653510 | 0.808805 | 2.585703e-50 | -8.615850e-47 |
| Msa0344870 | Msa0654010 | 0.820232 | 7.648119e-53 | -8.615850e-47 |
| Msa0344870 | Msa0658570 | 0.832686 | 8.203925e-56 | -8.615850e-47 |
| Msa0344870 | Msa0660300 | 0.811391 | 7.166377e-51 | -8.615850e-47 |
| Msa0344870 | Msa0661190 | -0.823852 | 1.107860e-53 | -8.615850e-47 |
| Msa0344870 | Msa0662650 | 0.840525 | 8.251055e-58 | -8.615850e-47 |
| Msa0344870 | Msa0669850 | 0.804282 | 2.328086e-49 | -8.615850e-47 |
| Msa0344870 | Msa0677270 | 0.852161 | 5.533453e-61 | -8.615850e-47 |
| Msa0344870 | Msa0679550 | 0.824166 | 9.352626e-54 | -8.615850e-47 |
| Msa0344870 | Msa0682550 | 0.803008 | 4.279702e-49 | -8.615850e-47 |
| Msa0344870 | Msa0682950 | 0.818867 | 1.566709e-52 | -8.615850e-47 |
| Msa0344870 | Msa0689010 | 0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa0344870 | Msa0690440 | 0.839877 | 1.217845e-57 | -8.615850e-47 |
| Msa0344870 | Msa0691050 | 0.805832 | 1.103408e-49 | -8.615850e-47 |
| Msa0344870 | Msa0693380 | 0.828905 | 6.933142e-55 | -8.615850e-47 |
| Msa0344870 | Msa0694250 | 0.803682 | 3.102423e-49 | -8.615850e-47 |
| Msa0344870 | Msa0703490 | 0.827224 | 1.760624e-54 | -8.615850e-47 |
| Msa0344870 | Msa0708860 | 0.839378 | 1.642731e-57 | -8.615850e-47 |
| Msa0344870 | Msa0714960 | 0.811134 | 8.149162e-51 | -8.615850e-47 |
| Msa0344870 | Msa0715110 | 0.842945 | 1.896211e-58 | -8.615850e-47 |
| Msa0344870 | Msa0724560 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa0344870 | Msa0731180 | 0.828682 | 7.847431e-55 | -8.615850e-47 |
| Msa0344870 | Msa0735160 | 0.805430 | 1.340302e-49 | -8.615850e-47 |
| Msa0344870 | Msa0739120 | 0.817951 | 2.526869e-52 | -8.615850e-47 |
| Msa0344870 | Msa0743260 | 0.821168 | 4.659940e-53 | -8.615850e-47 |
| Msa0344870 | Msa0744040 | 0.806097 | 9.703546e-50 | -8.615850e-47 |
| Msa0344870 | Msa0744170 | -0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0344870 | Msa0754720 | -0.829099 | 6.220291e-55 | -8.615850e-47 |
| Msa0344870 | Msa0756630 | -0.834208 | 3.423917e-56 | -8.615850e-47 |
| Msa0344870 | Msa0757050 | 0.819104 | 1.384005e-52 | -8.615850e-47 |
| Msa0344870 | Msa0757080 | 0.827140 | 1.843812e-54 | -8.615850e-47 |
| Msa0344870 | Msa0773840 | 0.806757 | 7.043675e-50 | -8.615850e-47 |
| Msa0344870 | Msa0778520 | 0.801404 | 9.151492e-49 | -8.615850e-47 |
| Msa0344870 | Msa0788070 | -0.813909 | 2.016063e-51 | -8.615850e-47 |
| Msa0344870 | Msa0788710 | 0.843902 | 1.053138e-58 | -8.615850e-47 |
| Msa0344870 | Msa0790510 | 0.803864 | 2.844685e-49 | -8.615850e-47 |
| Msa0344870 | Msa0795920 | 0.800332 | 1.514837e-48 | -8.615850e-47 |
| Msa0344870 | Msa0798030 | 0.815997 | 6.940512e-52 | -8.615850e-47 |
| Msa0344870 | Msa0798070 | 0.808656 | 2.781876e-50 | -8.615850e-47 |
| Msa0344870 | Msa0807030 | 0.832486 | 9.197057e-56 | -8.615850e-47 |
| Msa0344870 | Msa0827470 | 0.813492 | 2.490125e-51 | -8.615850e-47 |
| Msa0344870 | Msa0829620 | 0.802442 | 5.599890e-49 | -8.615850e-47 |
| Msa0344870 | Msa0832970 | 0.803672 | 3.117893e-49 | -8.615850e-47 |
| Msa0344870 | Msa0848900 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0344870 | Msa0860410 | 0.814291 | 1.660398e-51 | -8.615850e-47 |
| Msa0344870 | Msa0864470 | -0.812829 | 3.482389e-51 | -8.615850e-47 |
| Msa0344870 | Msa0869120 | 0.809901 | 1.504875e-50 | -8.615850e-47 |
| Msa0344870 | Msa0876360 | 0.801799 | 7.591523e-49 | -8.615850e-47 |
| Msa0344870 | Msa0881020 | 0.804798 | 1.817039e-49 | -8.615850e-47 |
| Msa0344870 | Msa0881030 | 0.806637 | 7.468375e-50 | -8.615850e-47 |
| Msa0344870 | Msa0891040 | 0.844503 | 7.262642e-59 | -8.615850e-47 |
| Msa0344870 | Msa0891600 | -0.805254 | 1.458840e-49 | -8.615850e-47 |
| Msa0344870 | Msa0893810 | 0.827200 | 1.784373e-54 | -8.615850e-47 |
| Msa0344870 | Msa0901320 | 0.818430 | 1.967937e-52 | -8.615850e-47 |
| Msa0344870 | Msa0908170 | 0.840448 | 8.642834e-58 | -8.615850e-47 |
| Msa0344870 | Msa0909000 | -0.813395 | 2.615774e-51 | -8.615850e-47 |
| Msa0344870 | Msa0910980 | -0.845667 | 3.519388e-59 | -8.615850e-47 |
| Msa0344870 | Msa0930400 | -0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0344870 | Msa0933440 | 0.805619 | 1.223080e-49 | -8.615850e-47 |
| Msa0344870 | Msa0935850 | 0.816511 | 5.325804e-52 | -8.615850e-47 |
| Msa0344870 | Msa0959010 | 0.816520 | 5.301647e-52 | -8.615850e-47 |
| Msa0344870 | Msa0961420 | -0.808580 | 2.888041e-50 | -8.615850e-47 |
| Msa0344870 | Msa0964130 | 0.812912 | 3.338844e-51 | -8.615850e-47 |
| Msa0344870 | Msa0965520 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
| Msa0344870 | Msa0973600 | 0.802288 | 6.023730e-49 | -8.615850e-47 |
| Msa0344870 | Msa0976250 | 0.833429 | 5.360082e-56 | -8.615850e-47 |
| Msa0344870 | Msa0978700 | 0.800796 | 1.218497e-48 | -8.615850e-47 |
| Msa0344870 | Msa0982270 | 0.850458 | 1.675693e-60 | -8.615850e-47 |
| Msa0344870 | Msa0990960 | 0.825647 | 4.181944e-54 | -8.615850e-47 |
| Msa0344870 | Msa0992490 | -0.836541 | 8.807423e-57 | -8.615850e-47 |
| Msa0344870 | Msa0993530 | 0.838082 | 3.552570e-57 | -8.615850e-47 |
| Msa0344870 | Msa0996170 | 0.816524 | 5.289986e-52 | -8.615850e-47 |
| Msa0344870 | Msa1001080 | 0.801987 | 6.946978e-49 | -8.615850e-47 |
| Msa0344870 | Msa1005410 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa0344870 | Msa1006850 | 0.841495 | 4.590280e-58 | -8.615850e-47 |
| Msa0344870 | Msa1012830 | 0.825312 | 5.021089e-54 | -8.615850e-47 |
| Msa0344870 | Msa1021340 | 0.817728 | 2.836142e-52 | -8.615850e-47 |
| Msa0344870 | Msa1021510 | 0.854924 | 8.898003e-62 | -8.615850e-47 |
| Msa0344870 | Msa1026760 | 0.819345 | 1.219650e-52 | -8.615850e-47 |
| Msa0344870 | Msa1026790 | 0.813668 | 2.277677e-51 | -8.615850e-47 |
| Msa0344870 | Msa1033410 | -0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa0344870 | Msa1037700 | -0.848753 | 5.013190e-60 | -8.615850e-47 |
| Msa0344870 | Msa1039880 | 0.836727 | 7.900817e-57 | -8.615850e-47 |
| Msa0344870 | Msa1040890 | 0.808852 | 2.526182e-50 | -8.615850e-47 |
| Msa0344870 | Msa1041730 | 0.802638 | 5.101803e-49 | -8.615850e-47 |
| Msa0344870 | Msa1046300 | 0.823334 | 1.465051e-53 | -8.615850e-47 |
| Msa0344870 | Msa1047720 | 0.848745 | 5.038053e-60 | -8.615850e-47 |
| Msa0344870 | Msa1053260 | 0.803438 | 3.486303e-49 | -8.615850e-47 |
| Msa0344870 | Msa1068200 | -0.800522 | 1.385401e-48 | -8.615850e-47 |
| Msa0344870 | Msa1072460 | -0.801318 | 9.527513e-49 | -8.615850e-47 |
| Msa0344870 | Msa1073070 | -0.821935 | 3.098083e-53 | -8.615850e-47 |
| Msa0344870 | Msa1075080 | -0.811624 | 6.377841e-51 | -8.615850e-47 |
| Msa0344870 | Msa1075220 | -0.819985 | 8.712618e-53 | -8.615850e-47 |
| Msa0344870 | Msa1077670 | 0.833851 | 4.205072e-56 | -8.615850e-47 |
| Msa0344870 | Msa1079730 | -0.823232 | 1.547148e-53 | -8.615850e-47 |
| Msa0344870 | Msa1080160 | 0.807288 | 5.438704e-50 | -8.615850e-47 |
| Msa0344870 | Msa1082500 | 0.844610 | 6.793715e-59 | -8.615850e-47 |
| Msa0344870 | Msa1083210 | 0.809355 | 1.971623e-50 | -8.615850e-47 |
| Msa0344870 | Msa1084260 | 0.824012 | 1.016323e-53 | -8.615850e-47 |
| Msa0344870 | Msa1085300 | 0.813319 | 2.718548e-51 | -8.615850e-47 |
| Msa0344870 | Msa1085920 | 0.838549 | 2.692221e-57 | -8.615850e-47 |
| Msa0344870 | Msa1087470 | 0.814005 | 1.920430e-51 | -8.615850e-47 |
| Msa0344870 | Msa1089040 | 0.829056 | 6.370738e-55 | -8.615850e-47 |
| Msa0344870 | Msa1090260 | 0.809201 | 2.126747e-50 | -8.615850e-47 |
| Msa0344870 | Msa1092090 | 0.826651 | 2.413773e-54 | -8.615850e-47 |
| Msa0344870 | Msa1092820 | 0.806691 | 7.274293e-50 | -8.615850e-47 |
| Msa0344870 | Msa1097800 | 0.810969 | 8.850705e-51 | -8.615850e-47 |
| Msa0344870 | Msa1100480 | 0.821944 | 3.083780e-53 | -8.615850e-47 |
| Msa0344870 | Msa1105500 | 0.851723 | 7.370704e-61 | -8.615850e-47 |
| Msa0344870 | Msa1113200 | 0.822080 | 2.868873e-53 | -8.615850e-47 |
| Msa0344870 | Msa1116130 | -0.826634 | 2.435356e-54 | -8.615850e-47 |
| Msa0344870 | Msa1118760 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa0344870 | Msa1124310 | 0.811965 | 5.377877e-51 | -8.615850e-47 |
| Msa0344870 | Msa1124540 | -0.810780 | 9.720498e-51 | -8.615850e-47 |
| Msa0344870 | Msa1125080 | 0.809690 | 1.670650e-50 | -8.615850e-47 |
| Msa0344870 | Msa1127830 | 0.836830 | 7.435839e-57 | -8.615850e-47 |
| Msa0344870 | Msa1130210 | -0.838941 | 2.132354e-57 | -8.615850e-47 |
| Msa0344870 | Msa1135880 | 0.823960 | 1.045498e-53 | -8.615850e-47 |
| Msa0344870 | Msa1139000 | -0.816443 | 5.515851e-52 | -8.615850e-47 |
| Msa0344870 | Msa1162550 | -0.825747 | 3.961019e-54 | -8.615850e-47 |
| Msa0344870 | Msa1168040 | -0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0344870 | Msa1171800 | 0.838944 | 2.127557e-57 | -8.615850e-47 |
| Msa0344870 | Msa1174310 | 0.809798 | 1.583422e-50 | -8.615850e-47 |
| Msa0344870 | Msa1178610 | 0.804412 | 2.187457e-49 | -8.615850e-47 |
| Msa0344870 | Msa1181550 | 0.834184 | 3.471168e-56 | -8.615850e-47 |
| Msa0344870 | Msa1185980 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
| Msa0344870 | Msa1186950 | -0.805375 | 1.376187e-49 | -8.615850e-47 |
| Msa0344870 | Msa1199560 | 0.845937 | 2.973603e-59 | -8.615850e-47 |
| Msa0344870 | Msa1199620 | 0.804230 | 2.386233e-49 | -8.615850e-47 |
| Msa0344870 | Msa1203250 | 0.816626 | 5.018307e-52 | -8.615850e-47 |
| Msa0344870 | Msa1205010 | -0.800795 | 1.218514e-48 | -8.615850e-47 |
| Msa0344870 | Msa1205130 | 0.808302 | 3.310598e-50 | -8.615850e-47 |
| Msa0344870 | Msa1214480 | 0.810602 | 1.062614e-50 | -8.615850e-47 |
| Msa0344870 | Msa1217810 | 0.801349 | 9.388232e-49 | -8.615850e-47 |
| Msa0344870 | Msa1217830 | 0.817211 | 3.708786e-52 | -8.615850e-47 |
| Msa0344870 | Msa1217860 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0344870 | Msa1219810 | 0.835276 | 1.844219e-56 | -8.615850e-47 |
| Msa0344870 | Msa1225370 | 0.805313 | 1.417756e-49 | -8.615850e-47 |
| Msa0344870 | Msa1229600 | 0.801129 | 1.041447e-48 | -8.615850e-47 |
| Msa0344870 | Msa1233500 | 0.859698 | 3.454891e-63 | -8.615850e-47 |
| Msa0344870 | Msa1233890 | 0.840239 | 9.798768e-58 | -8.615850e-47 |
| Msa0344870 | Msa1236070 | -0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0344870 | Msa1239530 | 0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0344870 | Msa1241600 | 0.808534 | 2.954299e-50 | -8.615850e-47 |
| Msa0344870 | Msa1247030 | 0.802774 | 4.781587e-49 | -8.615850e-47 |
| Msa0344870 | Msa1249920 | 0.825793 | 3.861605e-54 | -8.615850e-47 |
| Msa0344870 | Msa1267060 | 0.841349 | 5.015967e-58 | -8.615850e-47 |
| Msa0344870 | Msa1267260 | 0.804639 | 1.961081e-49 | -8.615850e-47 |
| Msa0344870 | Msa1271210 | 0.822579 | 2.196962e-53 | -8.615850e-47 |
| Msa0344870 | Msa1275770 | 0.818940 | 1.508208e-52 | -8.615850e-47 |
| Msa0344870 | Msa1276440 | 0.823712 | 1.195030e-53 | -8.615850e-47 |
| Msa0344870 | Msa1279210 | 0.858513 | 7.826740e-63 | -8.615850e-47 |
| Msa0344870 | Msa1284710 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa0344870 | Msa1289530 | 0.831837 | 1.331180e-55 | -8.615850e-47 |
| Msa0344870 | Msa1291350 | 0.808555 | 2.923565e-50 | -8.615850e-47 |
| Msa0344870 | Msa1299070 | 0.805649 | 1.205668e-49 | -8.615850e-47 |
| Msa0344870 | Msa1302190 | -0.804190 | 2.433340e-49 | -8.615850e-47 |
| Msa0344870 | Msa1306360 | 0.800756 | 1.241079e-48 | -8.615850e-47 |
| Msa0344870 | Msa1306750 | 0.833905 | 4.075924e-56 | -8.615850e-47 |
| Msa0344870 | Msa1307740 | 0.848766 | 4.972348e-60 | -8.615850e-47 |
| Msa0344870 | Msa1308590 | 0.810805 | 9.603963e-51 | -8.615850e-47 |
| Msa0344870 | Msa1310210 | 0.811598 | 6.462848e-51 | -8.615850e-47 |
| Msa0344870 | Msa1311340 | 0.823201 | 1.573244e-53 | -8.615850e-47 |
| Msa0344870 | Msa1314100 | 0.801561 | 8.497106e-49 | -8.615850e-47 |
| Msa0344870 | Msa1314340 | 0.816091 | 6.612482e-52 | -8.615850e-47 |
| Msa0344870 | Msa1314770 | 0.834792 | 2.441916e-56 | -8.615850e-47 |
| Msa0344870 | Msa1322190 | 0.819064 | 1.413080e-52 | -8.615850e-47 |
| Msa0344870 | Msa1328700 | 0.846685 | 1.859549e-59 | -8.615850e-47 |
| Msa0344870 | Msa1329700 | 0.800487 | 1.408348e-48 | -8.615850e-47 |
| Msa0344870 | Msa1331920 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0344870 | Msa1333410 | 0.809283 | 2.042619e-50 | -8.615850e-47 |
| Msa0344870 | Msa1340260 | 0.806709 | 7.209772e-50 | -8.615850e-47 |
| Msa0344870 | Msa1340650 | 0.821590 | 3.723270e-53 | -8.615850e-47 |
| Msa0344870 | Msa1351620 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0344870 | Msa1359650 | -0.823142 | 1.624096e-53 | -8.615850e-47 |
| Msa0344870 | Msa1362510 | 0.809394 | 1.933716e-50 | -8.615850e-47 |
| Msa0344870 | Msa1362880 | 0.834827 | 2.392757e-56 | -8.615850e-47 |
| Msa0344870 | Msa1365040 | -0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0344870 | Msa1369530 | 0.841964 | 3.452178e-58 | -8.615850e-47 |
| Msa0344870 | Msa1371430 | 0.804553 | 2.044016e-49 | -8.615850e-47 |
| Msa0344870 | Msa1376890 | 0.834611 | 2.712366e-56 | -8.615850e-47 |
| Msa0344870 | Msa1384350 | 0.813464 | 2.525605e-51 | -8.615850e-47 |
| Msa0344870 | Msa1392260 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0344870 | Msa1393410 | 0.809668 | 1.688447e-50 | -8.615850e-47 |
| Msa0344870 | Msa1397260 | 0.809524 | 1.813826e-50 | -8.615850e-47 |
| Msa0344870 | Msa1401140 | 0.804462 | 2.135624e-49 | -8.615850e-47 |
| Msa0344870 | Msa1401530 | 0.837715 | 4.413038e-57 | -8.615850e-47 |
| Msa0344870 | Msa1403930 | -0.810500 | 1.117889e-50 | -8.615850e-47 |
| Msa0344870 | Msa1404540 | 0.805445 | 1.330127e-49 | -8.615850e-47 |
| Msa0344870 | Msa1404670 | 0.830317 | 3.143433e-55 | -8.615850e-47 |
| Msa0344870 | Msa1408790 | 0.817478 | 3.229478e-52 | -8.615850e-47 |
| Msa0344870 | Msa1415940 | 0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0344870 | Msa1424680 | 0.805834 | 1.102404e-49 | -8.615850e-47 |
| Msa0344870 | Msa1427830 | 0.818909 | 1.532281e-52 | -8.615850e-47 |
| Msa0344870 | Msa1431060 | 0.813720 | 2.218831e-51 | -8.615850e-47 |
| Msa0344870 | Msa1435400 | 0.854209 | 1.433403e-61 | -8.615850e-47 |
| Msa0344870 | Msa1435420 | 0.805419 | 1.347053e-49 | -8.615850e-47 |
| Msa0344870 | Msa1436040 | 0.818738 | 1.676142e-52 | -8.615850e-47 |
| Msa0344870 | Msa1438700 | 0.801623 | 8.252144e-49 | -8.615850e-47 |
| Msa0344870 | Msa1439960 | 0.811221 | 7.801868e-51 | -8.615850e-47 |
| Msa0344870 | Msa1440600 | 0.812977 | 3.231189e-51 | -8.615850e-47 |
| Msa0344870 | Msa1440940 | 0.829650 | 4.572481e-55 | -8.615850e-47 |
| Msa0344870 | Msa1444740 | 0.811652 | 6.289970e-51 | -8.615850e-47 |
| Msa0344870 | Msa1447110 | 0.805798 | 1.121842e-49 | -8.615850e-47 |
| Msa0344870 | Msa1451620 | -0.842958 | 1.880942e-58 | -8.615850e-47 |
| Msa0344870 | Msa1454110 | 0.808974 | 2.379356e-50 | -8.615850e-47 |
| Msa0344870 | Msa1455390 | 0.829874 | 4.032480e-55 | -8.615850e-47 |
| Msa0344870 | Msa1458550 | 0.816125 | 6.497092e-52 | -8.615850e-47 |
| Msa0344870 | Msa1459760 | -0.803222 | 3.863389e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344870 | MtrunA17_Chr3g0136411 | 97.697 | 304 | 5 | 1 | 1 | 302 | 1 | 304 | 0.0 | 608 |
| Msa0344870 | MtrunA17_Chr3g0123881 | 39.322 | 295 | 176 | 3 | 5 | 298 | 6 | 298 | 4.43e-75 | 233 |
| Msa0344870 | MtrunA17_Chr5g0426241 | 38.754 | 289 | 172 | 4 | 13 | 298 | 12 | 298 | 3.84e-69 | 217 |
| Msa0344870 | MtrunA17_Chr2g0279171 | 39.661 | 295 | 174 | 4 | 6 | 298 | 9 | 301 | 9.40e-69 | 216 |
| Msa0344870 | MtrunA17_Chr5g0404141 | 38.194 | 288 | 162 | 5 | 23 | 298 | 19 | 302 | 2.18e-62 | 200 |
| Msa0344870 | MtrunA17_Chr8g0373201 | 37.801 | 291 | 162 | 5 | 23 | 298 | 19 | 305 | 4.09e-62 | 199 |
| Msa0344870 | MtrunA17_Chr5g0404211 | 38.043 | 276 | 161 | 5 | 30 | 299 | 26 | 297 | 4.45e-60 | 194 |
| Msa0344870 | MtrunA17_Chr5g0404161 | 36.683 | 199 | 112 | 4 | 23 | 209 | 29 | 225 | 5.05e-34 | 124 |
| Msa0344870 | MtrunA17_Chr8g0382001 | 40.541 | 148 | 80 | 1 | 6 | 153 | 5 | 144 | 8.56e-32 | 115 |
| Msa0344870 | MtrunA17_Chr8g0381981 | 29.054 | 148 | 87 | 3 | 168 | 298 | 10 | 156 | 9.31e-16 | 73.9 |
| Msa0344870 | MtrunA17_Chr5g0404171 | 40.476 | 84 | 49 | 1 | 215 | 298 | 4 | 86 | 8.54e-14 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344870 | AT5G21950.1 | 51.307 | 306 | 144 | 2 | 1 | 302 | 1 | 305 | 1.59e-116 | 338 |
| Msa0344870 | AT5G21950.6 | 51.307 | 306 | 144 | 2 | 1 | 302 | 53 | 357 | 1.23e-115 | 338 |
| Msa0344870 | AT4G33180.1 | 51.316 | 304 | 141 | 4 | 2 | 299 | 3 | 305 | 1.41e-110 | 323 |
| Msa0344870 | AT5G21950.7 | 52.239 | 268 | 123 | 2 | 1 | 264 | 1 | 267 | 2.89e-102 | 300 |
| Msa0344870 | AT5G21950.3 | 50.704 | 213 | 100 | 2 | 1 | 209 | 1 | 212 | 6.01e-73 | 224 |
| Msa0344870 | AT5G21950.2 | 50.704 | 213 | 100 | 2 | 1 | 209 | 1 | 212 | 6.01e-73 | 224 |
| Msa0344870 | AT5G21950.5 | 50.704 | 213 | 100 | 2 | 1 | 209 | 53 | 264 | 4.11e-72 | 224 |
| Msa0344870 | AT5G21950.4 | 50.704 | 213 | 100 | 2 | 1 | 209 | 53 | 264 | 4.11e-72 | 224 |
| Msa0344870 | AT4G33180.2 | 51.500 | 200 | 91 | 3 | 2 | 196 | 3 | 201 | 1.15e-69 | 216 |
| Msa0344870 | AT5G09430.1 | 36.120 | 299 | 183 | 4 | 6 | 298 | 11 | 307 | 2.06e-65 | 208 |
| Msa0344870 | AT4G39955.1 | 35.786 | 299 | 188 | 4 | 2 | 298 | 1 | 297 | 9.50e-64 | 204 |
| Msa0344870 | AT1G78210.1 | 37.544 | 285 | 170 | 6 | 20 | 298 | 19 | 301 | 7.11e-60 | 194 |
| Msa0344870 | AT1G72620.1 | 36.900 | 271 | 162 | 6 | 33 | 298 | 65 | 331 | 1.39e-56 | 186 |
| Msa0344870 | AT1G17430.1 | 35.333 | 300 | 176 | 9 | 7 | 298 | 40 | 329 | 5.58e-55 | 182 |
| Msa0344870 | AT2G18360.1 | 34.628 | 309 | 182 | 6 | 6 | 298 | 2 | 306 | 3.97e-53 | 176 |
| Msa0344870 | AT4G36610.1 | 34.247 | 292 | 170 | 6 | 23 | 298 | 19 | 304 | 1.30e-48 | 165 |
| Msa0344870 | AT2G18360.2 | 34.909 | 275 | 159 | 6 | 6 | 264 | 2 | 272 | 7.65e-46 | 156 |
Find 74 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCGGTTGTAAGAAATTT+AGG | 0.175192 | 3_1:+3800332 | None:intergenic |
| GAAACGTACAGTGTTGTTTA+TGG | 0.182392 | 3_1:+3802864 | None:intergenic |
| GATGATGATTAGTTAATTAT+TGG | 0.190298 | 3_1:+3802807 | None:intergenic |
| TGGAATAGTTGCGTATAATT+TGG | 0.256443 | 3_1:-3802395 | Msa0344870:CDS |
| GTTCCCGATCTAATCTTCTT+TGG | 0.272608 | 3_1:-3802532 | Msa0344870:CDS |
| TTGCAGGGTAATAAGTAAAA+AGG | 0.295321 | 3_1:-3800428 | Msa0344870:intron |
| AGAGATTATACTCAGATAAT+AGG | 0.333887 | 3_1:-3801999 | Msa0344870:CDS |
| AAAGTAGTTATTGCAAGTTC+TGG | 0.338855 | 3_1:-3802343 | Msa0344870:CDS |
| GAAAAGATGGAGCTTCTAAA+TGG | 0.345980 | 3_1:-3801973 | Msa0344870:CDS |
| TTTCTTGAGGGACTTCTTAA+GGG | 0.369669 | 3_1:-3802170 | Msa0344870:intron |
| GGCAAGATTGGAATTGATAA+AGG | 0.387643 | 3_1:-3800407 | Msa0344870:CDS |
| AAACATTTCACCTCTTCAAC+AGG | 0.392798 | 3_1:-3801923 | Msa0344870:intron |
| GGAAAATTGTTGGAGAAGAT+AGG | 0.395031 | 3_1:-3802454 | Msa0344870:CDS |
| TATAATTTGGCGAAGATGTT+GGG | 0.398616 | 3_1:-3802382 | Msa0344870:CDS |
| CTCGTCCTCATCCACGGTTT+CGG | 0.400394 | 3_1:-3802619 | Msa0344870:CDS |
| ATACATACTCCTTCAATTCA+TGG | 0.401600 | 3_1:+3801768 | None:intergenic |
| CTTCTAAATGGATTGTCTAT+AGG | 0.430621 | 3_1:-3801961 | Msa0344870:CDS |
| TACCTCCGCCGTTGTTTCAC+CGG | 0.432558 | 3_1:-3802733 | Msa0344870:CDS |
| ATAATATTGTTGAATTCCTC+CGG | 0.432661 | 3_1:+3800355 | None:intergenic |
| CGCCGTTGTTTCACCGGCGC+CGG | 0.436167 | 3_1:-3802727 | Msa0344870:CDS |
| AGAGAAATTTCAAGCGGAAT+CGG | 0.437076 | 3_1:-3802479 | Msa0344870:CDS |
| TGTTTATGGATGGATGAGTC+AGG | 0.446751 | 3_1:+3802878 | None:intergenic |
| TTCAACTGTTGAGGAGAAGA+AGG | 0.453370 | 3_1:+3802244 | None:intergenic |
| ATTATTGGATCATGACGATT+GGG | 0.458499 | 3_1:+3802822 | None:intergenic |
| TCCAGGAAGTTCTCGTATTG+TGG | 0.474193 | 3_1:-3801826 | Msa0344870:intron |
| GTCCTATGGCGATGTGGCAA+TGG | 0.477842 | 3_1:-3802597 | Msa0344870:CDS |
| AATTATTGGATCATGACGAT+TGG | 0.484999 | 3_1:+3802821 | None:intergenic |
| AATTCATGGGCCATCTGCAC+GGG | 0.491317 | 3_1:+3801782 | None:intergenic |
| AAATGGATTGTCTATAGGAC+AGG | 0.491723 | 3_1:-3801956 | Msa0344870:CDS |
| CATCCACGGTTTCGGTCCTA+TGG | 0.493553 | 3_1:-3802611 | Msa0344870:CDS |
| GCAGATGGCCCATGAATTGA+AGG | 0.496257 | 3_1:-3801777 | Msa0344870:CDS |
| GTGGCGTTGTTGAAAAGAGC+TGG | 0.502078 | 3_1:-3802295 | Msa0344870:CDS |
| TTGAGATAAGAGACCGGCGC+CGG | 0.505406 | 3_1:+3802714 | None:intergenic |
| CATTTAGTTACCTGTTGAAG+AGG | 0.505749 | 3_1:+3801913 | None:intergenic |
| CCATCGTTTCTTAGTTTCGC+CGG | 0.509953 | 3_1:-3802769 | Msa0344870:CDS |
| AGATAATAGGAAGGAAAAGA+TGG | 0.510309 | 3_1:-3801986 | Msa0344870:CDS |
| GTATAATTTGGCGAAGATGT+TGG | 0.512839 | 3_1:-3802383 | Msa0344870:CDS |
| CCAGGAAGTTCTCGTATTGT+GGG | 0.514777 | 3_1:-3801825 | Msa0344870:intron |
| CAATATATTTCCCGTGCAGA+TGG | 0.516669 | 3_1:-3801792 | Msa0344870:CDS |
| AGTTTCGCCGGCTTATACAA+CGG | 0.520083 | 3_1:-3802757 | Msa0344870:CDS |
| CACGTGGTGGGAACGAGTTA+TGG | 0.520296 | 3_1:-3802418 | Msa0344870:CDS |
| CGCCGGTGAAACAACGGCGG+AGG | 0.521427 | 3_1:+3802731 | None:intergenic |
| AAATTTCAAGCGGAATCGGT+TGG | 0.521716 | 3_1:-3802475 | Msa0344870:CDS |
| GGAATCGGTTGGAAAATTGT+TGG | 0.527438 | 3_1:-3802464 | Msa0344870:CDS |
| TCTCCAAAGAAGATTAGATC+GGG | 0.527590 | 3_1:+3802529 | None:intergenic |
| CGTACAGTGTTGTTTATGGA+TGG | 0.531733 | 3_1:+3802868 | None:intergenic |
| TTCTCCAAAGAAGATTAGAT+CGG | 0.537749 | 3_1:+3802528 | None:intergenic |
| TGTGCCACAAATTGAAAAGC+CGG | 0.542764 | 3_1:-3800374 | Msa0344870:CDS |
| GTTGTTGAAAAGAGCTGGAT+TGG | 0.546954 | 3_1:-3802290 | Msa0344870:CDS |
| AGAGATTGAAGTGTGGAGCT+AGG | 0.550512 | 3_1:+3802557 | None:intergenic |
| TACATACTCCTTCAATTCAT+GGG | 0.553495 | 3_1:+3801769 | None:intergenic |
| TAGGACCGAAACCGTGGATG+AGG | 0.554881 | 3_1:+3802614 | None:intergenic |
| CAATTCATGGGCCATCTGCA+CGG | 0.558178 | 3_1:+3801781 | None:intergenic |
| CCGTGGATGAGGACGAGAGA+AGG | 0.567087 | 3_1:+3802625 | None:intergenic |
| CCTTCTCTCGTCCTCATCCA+CGG | 0.567621 | 3_1:-3802625 | Msa0344870:CDS |
| CGCCATTGCCACATCGCCAT+AGG | 0.577637 | 3_1:+3802595 | None:intergenic |
| GACCGGCGCCGGTGAAACAA+CGG | 0.598385 | 3_1:+3802725 | None:intergenic |
| ATTGGATCATGACGATTGGG+TGG | 0.605843 | 3_1:+3802825 | None:intergenic |
| ATTATACTCAGATAATAGGA+AGG | 0.616496 | 3_1:-3801995 | Msa0344870:CDS |
| GAGGTAGCCGTTGTATAAGC+CGG | 0.623456 | 3_1:+3802750 | None:intergenic |
| CAGGAAGTTCTCGTATTGTG+GGG | 0.624648 | 3_1:-3801824 | Msa0344870:CDS |
| AGGAAGTTCTCGTATTGTGG+GGG | 0.630670 | 3_1:-3801823 | Msa0344870:CDS |
| AAGAACAGAGAAATTTCAAG+CGG | 0.633582 | 3_1:-3802485 | Msa0344870:CDS |
| GTTTCGGTCCTATGGCGATG+TGG | 0.638713 | 3_1:-3802603 | Msa0344870:CDS |
| CCGGCGAAACTAAGAAACGA+TGG | 0.642487 | 3_1:+3802769 | None:intergenic |
| AAGATTGGAATTGATAAAGG+AGG | 0.650039 | 3_1:-3800404 | Msa0344870:CDS |
| GTGGTGGGAACGAGTTATGG+TGG | 0.651158 | 3_1:-3802415 | Msa0344870:CDS |
| TCGCCATAGGACCGAAACCG+TGG | 0.671124 | 3_1:+3802608 | None:intergenic |
| GGAAGTTCTCGTATTGTGGG+GGG | 0.676838 | 3_1:-3801822 | Msa0344870:CDS |
| CATAACTCGTTCCCACCACG+TGG | 0.694739 | 3_1:+3802419 | None:intergenic |
| GCCACAAATTGAAAAGCCGG+AGG | 0.697095 | 3_1:-3800371 | Msa0344870:CDS |
| CGGCGCCGGTGAAACAACGG+CGG | 0.720587 | 3_1:+3802728 | None:intergenic |
| GGAACGTAGAGATTGAAGTG+TGG | 0.723813 | 3_1:+3802550 | None:intergenic |
| TATGACAAAGAATCATAACG+TGG | 0.759539 | 3_1:-3802314 | Msa0344870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTAATTTTCTTAAAAAAA+GGG | + | chr3_1:3802440-3802459 | None:intergenic | 10.0% |
| !!! | TTTGTAATTTTCTTAAAAAA+AGG | + | chr3_1:3802441-3802460 | None:intergenic | 10.0% |
| !!! | TTGTTTTAATTTGTTTTGTT+GGG | + | chr3_1:3800248-3800267 | None:intergenic | 15.0% |
| !!! | TTTGTTTTAATTTGTTTTGT+TGG | + | chr3_1:3800249-3800268 | None:intergenic | 15.0% |
| !! | ACTTATAATAAGTTCATAAT+GGG | - | chr3_1:3801476-3801495 | Msa0344870:intron | 15.0% |
| !! | CAAAAAAAAAAAAAAACCTA+TGG | + | chr3_1:3801585-3801604 | None:intergenic | 15.0% |
| !!! | TAGGTTTTTTTTTTTTTTTG+AGG | - | chr3_1:3801585-3801604 | Msa0344870:intron | 15.0% |
| !!! | AGGTTTTTTTTTTTTTTTGA+GGG | - | chr3_1:3801586-3801605 | Msa0344870:intron | 15.0% |
| !!! | TAAAATTAGTTTATAACCTA+TGG | + | chr3_1:3801622-3801641 | None:intergenic | 15.0% |
| !! | TGAATGAAATTCAATAATAA+GGG | + | chr3_1:3801833-3801852 | None:intergenic | 15.0% |
| !! | TTGAATGAAATTCAATAATA+AGG | + | chr3_1:3801834-3801853 | None:intergenic | 15.0% |
| !!! | TGTAATTTTCTTAAAAAAAG+GGG | + | chr3_1:3802439-3802458 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATTTTGTTTGAG+AGG | - | chr3_1:3802632-3802651 | Msa0344870:CDS | 15.0% |
| !! | GAAAAAAAAAATCAAGATTT+CGG | + | chr3_1:3802835-3802854 | None:intergenic | 15.0% |
| !!! | GATGATGATTAGTTAATTAT+TGG | + | chr3_1:3800344-3800363 | None:intergenic | 20.0% |
| !! | AAGTGTATCTATATGTTATT+AGG | + | chr3_1:3801460-3801479 | None:intergenic | 20.0% |
| !! | CACTTATAATAAGTTCATAA+TGG | - | chr3_1:3801475-3801494 | Msa0344870:intron | 20.0% |
| !!! | ATTCAATAATAAGGGTATAA+TGG | + | chr3_1:3801825-3801844 | None:intergenic | 20.0% |
| !!! | TTAATTGTGCACAATTTTTA+AGG | + | chr3_1:3801975-3801994 | None:intergenic | 20.0% |
| !! | AACTCTAAACTCTAATATAT+GGG | + | chr3_1:3802131-3802150 | None:intergenic | 20.0% |
| !!! | TTCACTATGTTTGAAATTTA+CGG | - | chr3_1:3802315-3802334 | Msa0344870:CDS | 20.0% |
| !!! | GTAATTTTCTTAAAAAAAGG+GGG | + | chr3_1:3802438-3802457 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTTCAACTGTTG+AGG | + | chr3_1:3800916-3800935 | None:intergenic | 25.0% |
| ! | AGAAAAAATTAGGCACAAAA+GGG | + | chr3_1:3800963-3800982 | None:intergenic | 25.0% |
| ! | AAGAAAAAATTAGGCACAAA+AGG | + | chr3_1:3800964-3800983 | None:intergenic | 25.0% |
| ! | AGAGATTATACTCAGATAAT+AGG | - | chr3_1:3801149-3801168 | Msa0344870:intron | 25.0% |
| ! | ATTATACTCAGATAATAGGA+AGG | - | chr3_1:3801153-3801172 | Msa0344870:intron | 25.0% |
| !! | ACACATTTAATTTACTCGTA+CGG | + | chr3_1:3801266-3801285 | None:intergenic | 25.0% |
| ! | ACAAAATATTATGCAGGATT+TGG | + | chr3_1:3801406-3801425 | None:intergenic | 25.0% |
| ! | ATATAAGATTGATTGATTGG+TGG | - | chr3_1:3801499-3801518 | Msa0344870:intron | 25.0% |
| ! | AAAACTGCTTATCAATTTCT+TGG | + | chr3_1:3801547-3801566 | None:intergenic | 25.0% |
| ! | AAAACCTATGGATGATATTT+GGG | + | chr3_1:3801573-3801592 | None:intergenic | 25.0% |
| ! | AAAAACCTATGGATGATATT+TGG | + | chr3_1:3801574-3801593 | None:intergenic | 25.0% |
| ! | ATAACCTATGGATGATATTT+GGG | + | chr3_1:3801610-3801629 | None:intergenic | 25.0% |
| ! | TATAACCTATGGATGATATT+TGG | + | chr3_1:3801611-3801630 | None:intergenic | 25.0% |
| !! | TCAATCCATTGGATAATTTT+GGG | + | chr3_1:3801678-3801697 | None:intergenic | 25.0% |
| !! | ATCAATCCATTGGATAATTT+TGG | + | chr3_1:3801679-3801698 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr3_1:3801863-3801882 | Msa0344870:intron | 25.0% |
| ! | TCCTTATTAATTGTAGTTAG+TGG | + | chr3_1:3801867-3801886 | None:intergenic | 25.0% |
| ! | AATATATGGGAAATGTTAAC+CGG | + | chr3_1:3802118-3802137 | None:intergenic | 25.0% |
| ! | CAACTCTAAACTCTAATATA+TGG | + | chr3_1:3802132-3802151 | None:intergenic | 25.0% |
| !!! | TCTTACATTTGATTTGATGA+TGG | - | chr3_1:3802249-3802268 | Msa0344870:CDS | 25.0% |
| !! | TCACTATGTTTGAAATTTAC+GGG | - | chr3_1:3802316-3802335 | Msa0344870:CDS | 25.0% |
| ! | ACATTTCAATAAACCCATTA+CGG | + | chr3_1:3802547-3802566 | None:intergenic | 25.0% |
| ! | CTTCTTATTAACTTATTGCA+GGG | - | chr3_1:3802705-3802724 | Msa0344870:CDS | 25.0% |
| ! | AATAAGTAAAAAGGCAAGAT+TGG | - | chr3_1:3802729-3802748 | Msa0344870:CDS | 25.0% |
| ! | ATAATATTGTTGAATTCCTC+CGG | + | chr3_1:3802796-3802815 | None:intergenic | 25.0% |
| ! | ATTTCGGTTGTAAGAAATTT+AGG | + | chr3_1:3802819-3802838 | None:intergenic | 25.0% |
| !!! | ACGAAGTAATCATTTTTTGA+AGG | + | chr3_1:3802895-3802914 | None:intergenic | 25.0% |
| ATTATTGGATCATGACGATT+GGG | + | chr3_1:3800329-3800348 | None:intergenic | 30.0% | |
| AATTATTGGATCATGACGAT+TGG | + | chr3_1:3800330-3800349 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGAGATAAGAGAC+CGG | + | chr3_1:3800443-3800462 | None:intergenic | 30.0% |
| !! | TTTTGTGTGGATTTGTTTGT+TGG | + | chr3_1:3800502-3800521 | None:intergenic | 30.0% |
| TTCTCCAAAGAAGATTAGAT+CGG | + | chr3_1:3800623-3800642 | None:intergenic | 30.0% | |
| AAGAACAGAGAAATTTCAAG+CGG | - | chr3_1:3800663-3800682 | Msa0344870:intron | 30.0% | |
| TGGAATAGTTGCGTATAATT+TGG | - | chr3_1:3800753-3800772 | Msa0344870:intron | 30.0% | |
| TATAATTTGGCGAAGATGTT+GGG | - | chr3_1:3800766-3800785 | Msa0344870:intron | 30.0% | |
| AAAGTAGTTATTGCAAGTTC+TGG | - | chr3_1:3800805-3800824 | Msa0344870:intron | 30.0% | |
| TATGACAAAGAATCATAACG+TGG | - | chr3_1:3800834-3800853 | Msa0344870:intron | 30.0% | |
| !!! | TTGTGCCTAATTTTTTCTTG+AGG | - | chr3_1:3800965-3800984 | Msa0344870:intron | 30.0% |
| !!! | TGTGCCTAATTTTTTCTTGA+GGG | - | chr3_1:3800966-3800985 | Msa0344870:intron | 30.0% |
| AAGTCCCTCAAGAAAAAATT+AGG | + | chr3_1:3800973-3800992 | None:intergenic | 30.0% | |
| AATTACGTACCATGTATGTA+TGG | + | chr3_1:3801065-3801084 | None:intergenic | 30.0% | |
| AGATAATAGGAAGGAAAAGA+TGG | - | chr3_1:3801162-3801181 | Msa0344870:intron | 30.0% | |
| !! | CTTCTAAATGGATTGTCTAT+AGG | - | chr3_1:3801187-3801206 | Msa0344870:intron | 30.0% |
| ATTTCACATTACTCATATCC+AGG | - | chr3_1:3801305-3801324 | Msa0344870:intron | 30.0% | |
| TACATACTCCTTCAATTCAT+GGG | + | chr3_1:3801382-3801401 | None:intergenic | 30.0% | |
| ATACATACTCCTTCAATTCA+TGG | + | chr3_1:3801383-3801402 | None:intergenic | 30.0% | |
| GCAGAAACAAAATATTATGC+AGG | + | chr3_1:3801412-3801431 | None:intergenic | 30.0% | |
| AGCACAAGTGAAAAGAAAAT+TGG | + | chr3_1:3801434-3801453 | None:intergenic | 30.0% | |
| GGGATATAAGATTGATTGAT+TGG | - | chr3_1:3801496-3801515 | Msa0344870:intron | 30.0% | |
| ! | ATTGATTGATTGGTGGTTAT+GGG | - | chr3_1:3801506-3801525 | Msa0344870:intron | 30.0% |
| TAGATCCCAAAATTATCCAA+TGG | - | chr3_1:3801670-3801689 | Msa0344870:intron | 30.0% | |
| GTGATGTGAAATTACCAAAA+TGG | - | chr3_1:3802412-3802431 | Msa0344870:CDS | 30.0% | |
| TAATGGAGGTAGTGAAAAAA+AGG | - | chr3_1:3802486-3802505 | Msa0344870:CDS | 30.0% | |
| AATGGAGGTAGTGAAAAAAA+GGG | - | chr3_1:3802487-3802506 | Msa0344870:CDS | 30.0% | |
| CCTGCAATAAGTTAATAAGA+AGG | + | chr3_1:3802707-3802726 | None:intergenic | 30.0% | |
| CCTTCTTATTAACTTATTGC+AGG | - | chr3_1:3802704-3802723 | Msa0344870:CDS | 30.0% | |
| TTGCAGGGTAATAAGTAAAA+AGG | - | chr3_1:3802720-3802739 | Msa0344870:CDS | 30.0% | |
| AAGATTGGAATTGATAAAGG+AGG | - | chr3_1:3802744-3802763 | Msa0344870:CDS | 30.0% | |
| !! | GAAACGTACAGTGTTGTTTA+TGG | + | chr3_1:3800287-3800306 | None:intergenic | 35.0% |
| ! | ACGAAACATCTCTCCATTTT+TGG | - | chr3_1:3800473-3800492 | Msa0344870:intron | 35.0% |
| !! | CGAAACATCTCTCCATTTTT+GGG | - | chr3_1:3800474-3800493 | Msa0344870:intron | 35.0% |
| !! | GAAACATCTCTCCATTTTTG+GGG | - | chr3_1:3800475-3800494 | Msa0344870:intron | 35.0% |
| TCTCCAAAGAAGATTAGATC+GGG | + | chr3_1:3800622-3800641 | None:intergenic | 35.0% | |
| AGAGAAATTTCAAGCGGAAT+CGG | - | chr3_1:3800669-3800688 | Msa0344870:intron | 35.0% | |
| GGAAAATTGTTGGAGAAGAT+AGG | - | chr3_1:3800694-3800713 | Msa0344870:intron | 35.0% | |
| GTATAATTTGGCGAAGATGT+TGG | - | chr3_1:3800765-3800784 | Msa0344870:intron | 35.0% | |
| ! | TTTTCTTGAGGGACTTCTTA+AGG | - | chr3_1:3800977-3800996 | Msa0344870:intron | 35.0% |
| TTTCTTGAGGGACTTCTTAA+GGG | - | chr3_1:3800978-3800997 | Msa0344870:intron | 35.0% | |
| GAGAATACACCATACATACA+TGG | - | chr3_1:3801053-3801072 | Msa0344870:intron | 35.0% | |
| ACGTAATTTGAACTCTCGTA+TGG | - | chr3_1:3801077-3801096 | Msa0344870:intron | 35.0% | |
| TGAACTCTCGTATGGTAAAA+AGG | - | chr3_1:3801085-3801104 | Msa0344870:intron | 35.0% | |
| GAACTCTCGTATGGTAAAAA+GGG | - | chr3_1:3801086-3801105 | Msa0344870:intron | 35.0% | |
| TCGTATGGTAAAAAGGGAAA+GGG | - | chr3_1:3801092-3801111 | Msa0344870:intron | 35.0% | |
| GAAAAGATGGAGCTTCTAAA+TGG | - | chr3_1:3801175-3801194 | Msa0344870:intron | 35.0% | |
| !! | AAATGGATTGTCTATAGGAC+AGG | - | chr3_1:3801192-3801211 | Msa0344870:intron | 35.0% |
| AAACATTTCACCTCTTCAAC+AGG | - | chr3_1:3801225-3801244 | Msa0344870:intron | 35.0% | |
| CATTTAGTTACCTGTTGAAG+AGG | + | chr3_1:3801238-3801257 | None:intergenic | 35.0% | |
| ! | GATTGATTGATTGGTGGTTA+TGG | - | chr3_1:3801505-3801524 | Msa0344870:intron | 35.0% |
| TCAATTTCTTGGCCTAAGTA+GGG | + | chr3_1:3801536-3801555 | None:intergenic | 35.0% | |
| ATCAATTTCTTGGCCTAAGT+AGG | + | chr3_1:3801537-3801556 | None:intergenic | 35.0% | |
| TTAGCCCAAATATCATCCAT+AGG | - | chr3_1:3801566-3801585 | Msa0344870:intron | 35.0% | |
| TGAGGGAAAATATCATCCAT+AGG | - | chr3_1:3801603-3801622 | Msa0344870:intron | 35.0% | |
| TTAGCCCAAATATCATCCAT+AGG | - | chr3_1:3801566-3801585 | Msa0344870:intron | 35.0% | |
| ! | GGGATCTAGTTTATAACCTA+TGG | + | chr3_1:3801658-3801677 | None:intergenic | 35.0% |
| ATGAAATGCGATCAATCCAT+TGG | + | chr3_1:3801689-3801708 | None:intergenic | 35.0% | |
| !!! | AGACACTTATTTTGAGACGA+AGG | + | chr3_1:3801730-3801749 | None:intergenic | 35.0% |
| TCATCCTCATCATAACCTAT+GGG | + | chr3_1:3802196-3802215 | None:intergenic | 35.0% | |
| ATCATCCTCATCATAACCTA+TGG | + | chr3_1:3802197-3802216 | None:intergenic | 35.0% | |
| !! | GATGGTTGATTTTTGCTCTT+TGG | - | chr3_1:3802267-3802286 | Msa0344870:CDS | 35.0% |
| !! | ATTTTTGCTCTTTGGAGACT+TGG | - | chr3_1:3802275-3802294 | Msa0344870:CDS | 35.0% |
| AGATGAAAGAACACATGGAA+GGG | - | chr3_1:3802371-3802390 | Msa0344870:CDS | 35.0% | |
| ! | TTAAAAAAAGGGGGCCATTT+TGG | + | chr3_1:3802429-3802448 | None:intergenic | 35.0% |
| TTTCAATAAACCCATTACGG+CGG | + | chr3_1:3802544-3802563 | None:intergenic | 35.0% | |
| GGCAAGATTGGAATTGATAA+AGG | - | chr3_1:3802741-3802760 | Msa0344870:CDS | 35.0% | |
| ! | TTGTTGGGAGAATGTTTTGC+AGG | + | chr3_1:3800233-3800252 | None:intergenic | 40.0% |
| TGTTTATGGATGGATGAGTC+AGG | + | chr3_1:3800273-3800292 | None:intergenic | 40.0% | |
| !! | CGTACAGTGTTGTTTATGGA+TGG | + | chr3_1:3800283-3800302 | None:intergenic | 40.0% |
| ! | TGTTTGTTGGACCCCAAAAA+TGG | + | chr3_1:3800489-3800508 | None:intergenic | 40.0% |
| GTTCCCGATCTAATCTTCTT+TGG | - | chr3_1:3800616-3800635 | Msa0344870:intron | 40.0% | |
| AAATTTCAAGCGGAATCGGT+TGG | - | chr3_1:3800673-3800692 | Msa0344870:intron | 40.0% | |
| GGAATCGGTTGGAAAATTGT+TGG | - | chr3_1:3800684-3800703 | Msa0344870:intron | 40.0% | |
| GTTGTTGAAAAGAGCTGGAT+TGG | - | chr3_1:3800858-3800877 | Msa0344870:intron | 40.0% | |
| TTCAACTGTTGAGGAGAAGA+AGG | + | chr3_1:3800907-3800926 | None:intergenic | 40.0% | |
| CTCGTATGGTAAAAAGGGAA+AGG | - | chr3_1:3801091-3801110 | Msa0344870:intron | 40.0% | |
| CAATATATTTCCCGTGCAGA+TGG | - | chr3_1:3801356-3801375 | Msa0344870:intron | 40.0% | |
| GTTATGGGTTTACCCTACTT+AGG | - | chr3_1:3801521-3801540 | Msa0344870:intron | 40.0% | |
| ! | TGTTTTCTTAACCAATGCCC+TGG | - | chr3_1:3802087-3802106 | Msa0344870:intron | 40.0% |
| AATGTTAACCGGTGTTTCCA+GGG | + | chr3_1:3802107-3802126 | None:intergenic | 40.0% | |
| AAATGTTAACCGGTGTTTCC+AGG | + | chr3_1:3802108-3802127 | None:intergenic | 40.0% | |
| CATCCTCATCATAACCTATG+GGG | + | chr3_1:3802195-3802214 | None:intergenic | 40.0% | |
| AAAGAGAGAACTGAGGGAAT+AGG | - | chr3_1:3802343-3802362 | Msa0344870:CDS | 40.0% | |
| AAGAGAGAACTGAGGGAATA+GGG | - | chr3_1:3802344-3802363 | Msa0344870:CDS | 40.0% | |
| GAGAGAGATGAAAGAACACA+TGG | - | chr3_1:3802366-3802385 | Msa0344870:CDS | 40.0% | |
| GAGATGAAAGAACACATGGA+AGG | - | chr3_1:3802370-3802389 | Msa0344870:CDS | 40.0% | |
| TACAAAACAGCCATCCACAT+AGG | - | chr3_1:3802455-3802474 | Msa0344870:CDS | 40.0% | |
| TATACACATGCCTATGTGGA+TGG | + | chr3_1:3802468-3802487 | None:intergenic | 40.0% | |
| CCATTATACACATGCCTATG+TGG | + | chr3_1:3802472-3802491 | None:intergenic | 40.0% | |
| CCACATAGGCATGTGTATAA+TGG | - | chr3_1:3802469-3802488 | Msa0344870:CDS | 40.0% | |
| CATAGGCATGTGTATAATGG+AGG | - | chr3_1:3802472-3802491 | Msa0344870:CDS | 40.0% | |
| ACAACTCGTGTAAGTCATGT+GGG | + | chr3_1:3802682-3802701 | None:intergenic | 40.0% | |
| AACAACTCGTGTAAGTCATG+TGG | + | chr3_1:3802683-3802702 | None:intergenic | 40.0% | |
| TGTGCCACAAATTGAAAAGC+CGG | - | chr3_1:3802774-3802793 | Msa0344870:CDS | 40.0% | |
| ATTGGATCATGACGATTGGG+TGG | + | chr3_1:3800326-3800345 | None:intergenic | 45.0% | |
| CCATCGTTTCTTAGTTTCGC+CGG | - | chr3_1:3800379-3800398 | Msa0344870:CDS | 45.0% | |
| !! | AGTTTCGCCGGCTTATACAA+CGG | - | chr3_1:3800391-3800410 | Msa0344870:CDS | 45.0% |
| ! | GACGAGAGAAGGTTTTTGTG+TGG | + | chr3_1:3800515-3800534 | None:intergenic | 45.0% |
| AGAGATTGAAGTGTGGAGCT+AGG | + | chr3_1:3800594-3800613 | None:intergenic | 45.0% | |
| GGAACGTAGAGATTGAAGTG+TGG | + | chr3_1:3800601-3800620 | None:intergenic | 45.0% | |
| TCCAGGAAGTTCTCGTATTG+TGG | - | chr3_1:3801322-3801341 | Msa0344870:intron | 45.0% | |
| CCAGGAAGTTCTCGTATTGT+GGG | - | chr3_1:3801323-3801342 | Msa0344870:intron | 45.0% | |
| CAGGAAGTTCTCGTATTGTG+GGG | - | chr3_1:3801324-3801343 | Msa0344870:intron | 45.0% | |
| AGGAAGTTCTCGTATTGTGG+GGG | - | chr3_1:3801325-3801344 | Msa0344870:intron | 45.0% | |
| ACACCCCATAGGTTATGATG+AGG | - | chr3_1:3802189-3802208 | Msa0344870:CDS | 45.0% | |
| GGAGAGAAAGAGAGAACTGA+GGG | - | chr3_1:3802337-3802356 | Msa0344870:CDS | 45.0% | |
| AGAACACATGGAAGGGTTTG+AGG | - | chr3_1:3802378-3802397 | Msa0344870:CDS | 45.0% | |
| GAACACATGGAAGGGTTTGA+GGG | - | chr3_1:3802379-3802398 | Msa0344870:CDS | 45.0% | |
| ! | TCCTCCGGCTTTTCAATTTG+TGG | + | chr3_1:3802781-3802800 | None:intergenic | 45.0% |
| CCGGCGAAACTAAGAAACGA+TGG | + | chr3_1:3800382-3800401 | None:intergenic | 50.0% | |
| GAGGTAGCCGTTGTATAAGC+CGG | + | chr3_1:3800401-3800420 | None:intergenic | 50.0% | |
| !! | AGGTGTGAAAAAGTGCCACG+TGG | - | chr3_1:3800714-3800733 | Msa0344870:intron | 50.0% |
| !! | TGTGAAAAAGTGCCACGTGG+TGG | - | chr3_1:3800717-3800736 | Msa0344870:intron | 50.0% |
| !! | GTGAAAAAGTGCCACGTGGT+GGG | - | chr3_1:3800718-3800737 | Msa0344870:intron | 50.0% |
| GTGGCGTTGTTGAAAAGAGC+TGG | - | chr3_1:3800853-3800872 | Msa0344870:intron | 50.0% | |
| CCCACAATACGAGAACTTCC+TGG | + | chr3_1:3801326-3801345 | None:intergenic | 50.0% | |
| GGAAGTTCTCGTATTGTGGG+GGG | - | chr3_1:3801326-3801345 | Msa0344870:intron | 50.0% | |
| AATTCATGGGCCATCTGCAC+GGG | + | chr3_1:3801369-3801388 | None:intergenic | 50.0% | |
| CAATTCATGGGCCATCTGCA+CGG | + | chr3_1:3801370-3801389 | None:intergenic | 50.0% | |
| GCAGATGGCCCATGAATTGA+AGG | - | chr3_1:3801371-3801390 | Msa0344870:intron | 50.0% | |
| AACCAATGCCCTGGAAACAC+CGG | - | chr3_1:3802096-3802115 | Msa0344870:intron | 50.0% | |
| CTCACTCTTCTACACCCCAT+AGG | - | chr3_1:3802178-3802197 | Msa0344870:CDS | 50.0% | |
| GGGAGAGAAAGAGAGAACTG+AGG | - | chr3_1:3802336-3802355 | Msa0344870:CDS | 50.0% | |
| AACTGAAACCACCGCCGTAA+TGG | - | chr3_1:3802530-3802549 | Msa0344870:CDS | 50.0% | |
| ACTGAAACCACCGCCGTAAT+GGG | - | chr3_1:3802531-3802550 | Msa0344870:CDS | 50.0% | |
| CAATAAACCCATTACGGCGG+TGG | + | chr3_1:3802541-3802560 | None:intergenic | 50.0% | |
| TCGTGTAAGTCATGTGGGCA+TGG | + | chr3_1:3802677-3802696 | None:intergenic | 50.0% | |
| GCCACAAATTGAAAAGCCGG+AGG | - | chr3_1:3802777-3802796 | Msa0344870:CDS | 50.0% | |
| ! | TACCTCCGCCGTTGTTTCAC+CGG | - | chr3_1:3800415-3800434 | Msa0344870:CDS | 55.0% |
| TTGAGATAAGAGACCGGCGC+CGG | + | chr3_1:3800437-3800456 | None:intergenic | 55.0% | |
| CCTTCTCTCGTCCTCATCCA+CGG | - | chr3_1:3800523-3800542 | Msa0344870:intron | 55.0% | |
| CTCGTCCTCATCCACGGTTT+CGG | - | chr3_1:3800529-3800548 | Msa0344870:intron | 55.0% | |
| TAGGACCGAAACCGTGGATG+AGG | + | chr3_1:3800537-3800556 | None:intergenic | 55.0% | |
| CATCCACGGTTTCGGTCCTA+TGG | - | chr3_1:3800537-3800556 | Msa0344870:intron | 55.0% | |
| GTTTCGGTCCTATGGCGATG+TGG | - | chr3_1:3800545-3800564 | Msa0344870:intron | 55.0% | |
| GTCCTATGGCGATGTGGCAA+TGG | - | chr3_1:3800551-3800570 | Msa0344870:intron | 55.0% | |
| CATAACTCGTTCCCACCACG+TGG | + | chr3_1:3800732-3800751 | None:intergenic | 55.0% | |
| ! | CACGTGGTGGGAACGAGTTA+TGG | - | chr3_1:3800730-3800749 | Msa0344870:intron | 55.0% |
| ! | GTGGTGGGAACGAGTTATGG+TGG | - | chr3_1:3800733-3800752 | Msa0344870:intron | 55.0% |
| AACCGGTGTTTCCAGGGCAT+TGG | + | chr3_1:3802101-3802120 | None:intergenic | 55.0% | |
| CACATGGAAGGGTTTGAGGG+TGG | - | chr3_1:3802382-3802401 | Msa0344870:CDS | 55.0% | |
| AGGGTTTGAGGGTGGTGTGT+TGG | - | chr3_1:3802390-3802409 | Msa0344870:CDS | 55.0% | |
| CCGTGGATGAGGACGAGAGA+AGG | + | chr3_1:3800526-3800545 | None:intergenic | 60.0% | |
| TCGCCATAGGACCGAAACCG+TGG | + | chr3_1:3800543-3800562 | None:intergenic | 60.0% | |
| CGCCATTGCCACATCGCCAT+AGG | + | chr3_1:3800556-3800575 | None:intergenic | 60.0% | |
| !! | GACCGGCGCCGGTGAAACAA+CGG | + | chr3_1:3800426-3800445 | None:intergenic | 65.0% |
| CGCCGGTGAAACAACGGCGG+AGG | + | chr3_1:3800420-3800439 | None:intergenic | 70.0% | |
| !! | CGGCGCCGGTGAAACAACGG+CGG | + | chr3_1:3800423-3800442 | None:intergenic | 70.0% |
| ! | CGCCGTTGTTTCACCGGCGC+CGG | - | chr3_1:3800421-3800440 | Msa0344870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 3800215 | 3802955 | 3800215 | ID=Msa0344870;Name=Msa0344870 |
| chr3_1 | mRNA | 3800215 | 3802955 | 3800215 | ID=Msa0344870-mRNA-1;Parent=Msa0344870;Name=Msa0344870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=158|1|1|1|1|1|4|112|302 |
| chr3_1 | exon | 3800215 | 3800444 | 3800215 | ID=Msa0344870-mRNA-1:exon:1226;Parent=Msa0344870-mRNA-1 |
| chr3_1 | exon | 3801776 | 3801843 | 3801776 | ID=Msa0344870-mRNA-1:exon:1225;Parent=Msa0344870-mRNA-1 |
| chr3_1 | exon | 3801924 | 3802019 | 3801924 | ID=Msa0344870-mRNA-1:exon:1224;Parent=Msa0344870-mRNA-1 |
| chr3_1 | exon | 3802171 | 3802955 | 3802171 | ID=Msa0344870-mRNA-1:exon:1223;Parent=Msa0344870-mRNA-1 |
| chr3_1 | five_prime_UTR | 3802798 | 3802955 | 3802798 | ID=Msa0344870-mRNA-1:five_prime_utr;Parent=Msa0344870-mRNA-1 |
| chr3_1 | CDS | 3802171 | 3802797 | 3802171 | ID=Msa0344870-mRNA-1:cds;Parent=Msa0344870-mRNA-1 |
| chr3_1 | CDS | 3801924 | 3802019 | 3801924 | ID=Msa0344870-mRNA-1:cds;Parent=Msa0344870-mRNA-1 |
| chr3_1 | CDS | 3801776 | 3801843 | 3801776 | ID=Msa0344870-mRNA-1:cds;Parent=Msa0344870-mRNA-1 |
| chr3_1 | CDS | 3800327 | 3800444 | 3800327 | ID=Msa0344870-mRNA-1:cds;Parent=Msa0344870-mRNA-1 |
| chr3_1 | three_prime_UTR | 3800215 | 3800326 | 3800215 | ID=Msa0344870-mRNA-1:three_prime_utr;Parent=Msa0344870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
