Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371360 | XP_003603454.2 | 94.819 | 193 | 9 | 1 | 1 | 193 | 1 | 192 | 1.20e-131 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371360 | G7JBN9 | 94.819 | 193 | 9 | 1 | 1 | 193 | 1 | 192 | 5.71e-132 | 377 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa1371360 | 0.845004 | 5.319650e-59 | -8.615850e-47 |
| Msa0025690 | Msa1371360 | 0.812069 | 5.103617e-51 | -8.615850e-47 |
| Msa0041780 | Msa1371360 | 0.812828 | 3.482838e-51 | -8.615850e-47 |
| Msa1348240 | Msa1371360 | 0.802544 | 5.335859e-49 | -8.615850e-47 |
| Msa1371360 | Msa1386250 | 0.803528 | 3.338612e-49 | -8.615850e-47 |
| Msa1371360 | Msa1395640 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa1371360 | Msa1396090 | 0.855025 | 8.318358e-62 | -8.615850e-47 |
| Msa1371360 | Msa1405400 | 0.807691 | 4.466659e-50 | -8.615850e-47 |
| Msa1371360 | Msa1410180 | 0.833958 | 3.953567e-56 | -8.615850e-47 |
| Msa1371360 | Msa1415560 | 0.971932 | 6.009349e-134 | -8.615850e-47 |
| Msa1371360 | Msa1428560 | 0.841194 | 5.509367e-58 | -8.615850e-47 |
| Msa1371360 | Msa1432250 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa1371360 | Msa1433380 | 0.801829 | 7.484053e-49 | -8.615850e-47 |
| Msa1371360 | Msa1457450 | 0.817384 | 3.391604e-52 | -8.615850e-47 |
| Msa1371360 | Msa1459630 | 0.800240 | 1.581109e-48 | -8.615850e-47 |
| Msa0639030 | Msa1371360 | 0.828963 | 6.710042e-55 | -8.615850e-47 |
| Msa0648200 | Msa1371360 | 0.809214 | 2.113690e-50 | -8.615850e-47 |
| Msa0697600 | Msa1371360 | 0.825273 | 5.128173e-54 | -8.615850e-47 |
| Msa0184030 | Msa1371360 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
| Msa0216550 | Msa1371360 | 0.810931 | 9.019183e-51 | -8.615850e-47 |
| Msa1230190 | Msa1371360 | 0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa1306700 | Msa1371360 | 0.801200 | 1.007418e-48 | -8.615850e-47 |
| Msa1328600 | Msa1371360 | 0.804308 | 2.298730e-49 | -8.615850e-47 |
| Msa0378670 | Msa1371360 | 0.824293 | 8.730046e-54 | -8.615850e-47 |
| Msa0378700 | Msa1371360 | 0.813718 | 2.221667e-51 | -8.615850e-47 |
| Msa0411000 | Msa1371360 | 0.811398 | 7.141763e-51 | -8.615850e-47 |
| Msa0467710 | Msa1371360 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa1031760 | Msa1371360 | 0.829365 | 5.362100e-55 | -8.615850e-47 |
| Msa1067710 | Msa1371360 | 0.802714 | 4.921887e-49 | -8.615850e-47 |
| Msa1070830 | Msa1371360 | 0.834128 | 3.584347e-56 | -8.615850e-47 |
| Msa1071310 | Msa1371360 | 0.828177 | 1.039034e-54 | -8.615850e-47 |
| Msa0243820 | Msa1371360 | 0.845326 | 4.354553e-59 | -8.615850e-47 |
| Msa0256410 | Msa1371360 | 0.817213 | 3.705477e-52 | -8.615850e-47 |
| Msa0282500 | Msa1371360 | 0.840801 | 6.986577e-58 | -8.615850e-47 |
| Msa0295850 | Msa1371360 | 0.804392 | 2.207934e-49 | -8.615850e-47 |
| Msa0301300 | Msa1371360 | 0.804469 | 2.127942e-49 | -8.615850e-47 |
| Msa1113280 | Msa1371360 | 0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa1158650 | Msa1371360 | 0.825292 | 5.075898e-54 | -8.615850e-47 |
| Msa1166170 | Msa1371360 | 0.837102 | 6.336553e-57 | -8.615850e-47 |
| Msa1166270 | Msa1371360 | 0.840038 | 1.106216e-57 | -8.615850e-47 |
| Msa1182400 | Msa1371360 | 0.809613 | 1.735383e-50 | -8.615850e-47 |
| Msa0546370 | Msa1371360 | 0.811814 | 5.798286e-51 | -8.615850e-47 |
| Msa0554440 | Msa1371360 | 0.800868 | 1.177673e-48 | -8.615850e-47 |
| Msa0861480 | Msa1371360 | 0.825292 | 5.075898e-54 | -8.615850e-47 |
| Msa0861560 | Msa1371360 | 0.813423 | 2.579353e-51 | -8.615850e-47 |
| Msa0883660 | Msa1371360 | 0.809139 | 2.193479e-50 | -8.615850e-47 |
| Msa0883670 | Msa1371360 | 0.809104 | 2.231054e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371360 | MtrunA17_Chr3g0138241 | 94.819 | 193 | 9 | 1 | 1 | 193 | 1 | 192 | 1.10e-135 | 377 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371360 | AT2G25605.1 | 73.134 | 201 | 45 | 2 | 1 | 193 | 1 | 200 | 1.20e-107 | 307 |
Find 61 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAGGTCAACCTATTT+TGG | 0.145914 | tig0019197:+118045 | Msa1371360:CDS |
| TCATTATGTGTAAATAAATT+AGG | 0.156875 | tig0019197:+119680 | Msa1371360:three_prime_UTR |
| TTCTACTTACCGAGTCTTAT+TGG | 0.178762 | tig0019197:+118561 | Msa1371360:CDS |
| GTGGTTGCTGGGATGGTTAT+TGG | 0.225394 | tig0019197:+119475 | Msa1371360:CDS |
| TGGCGACTCCTGCAACATTT+TGG | 0.246997 | tig0019197:-119752 | None:intergenic |
| ACAAATATAAGCAGCGGATT+TGG | 0.255858 | tig0019197:+118748 | Msa1371360:CDS |
| TAGCATATCACTTTATGTTT+TGG | 0.273380 | tig0019197:-119596 | None:intergenic |
| CATTATGTGTAAATAAATTA+GGG | 0.314300 | tig0019197:+119681 | Msa1371360:three_prime_UTR |
| ATCAAAGAATGGGCCAAAAT+AGG | 0.335461 | tig0019197:-118058 | None:intergenic |
| CAAATATAAGCAGCGGATTT+GGG | 0.340325 | tig0019197:+118749 | Msa1371360:CDS |
| TCTACTTACCGAGTCTTATT+GGG | 0.340415 | tig0019197:+118562 | Msa1371360:CDS |
| ATTTCAATTTACAATGGTTC+AGG | 0.356398 | tig0019197:+118803 | Msa1371360:CDS |
| CGGGTTGGTGGTTGCTGGGA+TGG | 0.367466 | tig0019197:+119468 | Msa1371360:CDS |
| GACCAGCCTCGTCAAGACTA+TGG | 0.385917 | tig0019197:+117908 | Msa1371360:CDS |
| GGTCTAAATTAAATTGTCTA+TGG | 0.396089 | tig0019197:-117518 | None:intergenic |
| TTTGCACTGTCATTACTCAT+TGG | 0.405323 | tig0019197:+119867 | Msa1371360:three_prime_UTR |
| GCAGCGGGTTGGTGGTTGCT+GGG | 0.409646 | tig0019197:+119464 | Msa1371360:intron |
| GATCATGAGCAGTTTATTTG+TGG | 0.421084 | tig0019197:+118600 | Msa1371360:CDS |
| CCCATTCTTTGATCTCGGTC+AGG | 0.431850 | tig0019197:+118068 | Msa1371360:CDS |
| CGAAGACATACGATGTCGTT+TGG | 0.437458 | tig0019197:+117605 | Msa1371360:exon |
| ACAAAGTAGGGCGGAGAAGA+AGG | 0.443138 | tig0019197:-117644 | None:intergenic |
| CCGACTTTCTCTCTTCTGAC+TGG | 0.451688 | tig0019197:+117717 | Msa1371360:CDS |
| ACATCTAATCTTGGACCAAA+TGG | 0.454214 | tig0019197:-117761 | None:intergenic |
| AATGTAATGTATGCAATTGA+AGG | 0.464515 | tig0019197:-119841 | None:intergenic |
| GCTTCCTTTGAATTTAGCTC+AGG | 0.470418 | tig0019197:-117551 | None:intergenic |
| ATAGTGCTCACATCTAATCT+TGG | 0.471535 | tig0019197:-117770 | None:intergenic |
| AAATAGGTTGACCTTTCAAA+AGG | 0.471757 | tig0019197:-118042 | None:intergenic |
| TTTGGCCCATTCTTTGATCT+CGG | 0.472760 | tig0019197:+118063 | Msa1371360:CDS |
| TGAAATATCTCCTCTTCCTC+TGG | 0.475702 | tig0019197:-118786 | None:intergenic |
| AGGAAGTCGACCAGAGGAAG+AGG | 0.484758 | tig0019197:+118776 | Msa1371360:CDS |
| AGAGTCTCTGCTTCATGACT+TGG | 0.485170 | tig0019197:+119503 | Msa1371360:CDS |
| CTCTTCTTATGCAGTTTGAA+AGG | 0.490282 | tig0019197:+118518 | Msa1371360:intron |
| CAGTCAGAAGAGAGAAAGTC+GGG | 0.495359 | tig0019197:-117716 | None:intergenic |
| TGCAGAGACTTTGAAGGGAG+AGG | 0.500078 | tig0019197:-117687 | None:intergenic |
| AACATTTGCAGAGACTTTGA+AGG | 0.504103 | tig0019197:-117693 | None:intergenic |
| GAGCAGTTTATTTGTGGAGG+AGG | 0.507190 | tig0019197:+118606 | Msa1371360:CDS |
| TCCTTTGAATTTAGCTCAGG+AGG | 0.508303 | tig0019197:-117548 | None:intergenic |
| AAATAAATTAGGGCTATCAT+TGG | 0.509619 | tig0019197:+119691 | Msa1371360:three_prime_UTR |
| TGTTATTGGCAGCGGGTTGG+TGG | 0.527157 | tig0019197:+119456 | Msa1371360:intron |
| TTCCATAGTCTTGACGAGGC+TGG | 0.528492 | tig0019197:-117910 | None:intergenic |
| CATGAGCAGTTTATTTGTGG+AGG | 0.534205 | tig0019197:+118603 | Msa1371360:CDS |
| ATAAGACTCGGTAAGTAGAA+TGG | 0.541848 | tig0019197:-118558 | None:intergenic |
| AAGCAGCGGATTTGGGTTCG+AGG | 0.544388 | tig0019197:+118756 | Msa1371360:CDS |
| TCCTCCTGAGCTAAATTCAA+AGG | 0.544669 | tig0019197:+117547 | Msa1371360:five_prime_UTR |
| CCGAGTCTTATTGGGTCACA+AGG | 0.548125 | tig0019197:+118570 | Msa1371360:CDS |
| CCTTGTGACCCAATAAGACT+CGG | 0.556779 | tig0019197:-118570 | None:intergenic |
| CCTGACCGAGATCAAAGAAT+GGG | 0.560157 | tig0019197:-118068 | None:intergenic |
| ACCTGACCGAGATCAAAGAA+TGG | 0.564894 | tig0019197:-118069 | None:intergenic |
| TGTTGTTATTGGCAGCGGGT+TGG | 0.567299 | tig0019197:+119453 | Msa1371360:intron |
| GTCAGTTTCATGAAGCTCCA+TGG | 0.579376 | tig0019197:+119573 | Msa1371360:three_prime_UTR |
| ATGCGCAGGACTGTTTACAT+TGG | 0.590226 | tig0019197:-119725 | None:intergenic |
| GGAGATATTTCAATTTACAA+TGG | 0.592072 | tig0019197:+118797 | Msa1371360:CDS |
| ACATTTGCAGAGACTTTGAA+GGG | 0.596568 | tig0019197:-117692 | None:intergenic |
| CCAGTCAGAAGAGAGAAAGT+CGG | 0.600808 | tig0019197:-117717 | None:intergenic |
| GAGTATAAGCGTGTAACACA+TGG | 0.608832 | tig0019197:-119772 | None:intergenic |
| AACAGAACAAATATAAGCAG+CGG | 0.625934 | tig0019197:+118742 | Msa1371360:intron |
| CTGTTTACATTGGATCAGCA+AGG | 0.644416 | tig0019197:-119715 | None:intergenic |
| GGTTCGAGGAAGTCGACCAG+AGG | 0.647129 | tig0019197:+118770 | Msa1371360:CDS |
| TTTAGCTCAGGAGGATGACG+AGG | 0.672376 | tig0019197:-117539 | None:intergenic |
| TCAATTCCATAGTCTTGACG+AGG | 0.689142 | tig0019197:-117914 | None:intergenic |
| TTTCTGCAAACAAAGTAGGG+CGG | 0.692916 | tig0019197:-117653 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATATATAAACTATTTAT+TGG | - | tig0019197:119035-119054 | None:intergenic | 10.0% |
| !! | TAGATATATAAACTATTTAT+TGG | - | tig0019197:119035-119054 | None:intergenic | 10.0% |
| !! | AATTAAACTAATAATCGAAA+AGG | - | tig0019197:117804-117823 | None:intergenic | 15.0% |
| !!! | TTTCGATTATTAGTTTAATT+CGG | + | tig0019197:117804-117823 | Msa1371360:intron | 15.0% |
| !!! | TTAATGTTCTTTTTCATTTT+TGG | + | tig0019197:118692-118711 | Msa1371360:intron | 15.0% |
| !! | TGTTATATTATCATAATCAT+TGG | + | tig0019197:118831-118850 | Msa1371360:intron | 15.0% |
| !! | GTTATATTATCATAATCATT+GGG | + | tig0019197:118832-118851 | Msa1371360:intron | 15.0% |
| !! | TTATTAAAGAAATTAGTAGA+AGG | - | tig0019197:118991-119010 | None:intergenic | 15.0% |
| !! | TATATAAACTATTTATTGGA+TGG | - | tig0019197:119031-119050 | None:intergenic | 15.0% |
| !! | TTTATATATCTAAATCCTTT+GGG | + | tig0019197:119043-119062 | Msa1371360:intron | 15.0% |
| !!! | TCTTTTTCTAAAATTATCAT+CGG | - | tig0019197:119136-119155 | None:intergenic | 15.0% |
| !! | TCATTATGTGTAAATAAATT+AGG | + | tig0019197:119680-119699 | Msa1371360:three_prime_UTR | 15.0% |
| !! | CATTATGTGTAAATAAATTA+GGG | + | tig0019197:119681-119700 | Msa1371360:three_prime_UTR | 15.0% |
| !! | AATTAAACTAATAATCGAAA+AGG | - | tig0019197:117804-117823 | None:intergenic | 15.0% |
| !!! | TTTCGATTATTAGTTTAATT+CGG | + | tig0019197:117804-117823 | Msa1371360:intron | 15.0% |
| !!! | TTAATGTTCTTTTTCATTTT+TGG | + | tig0019197:118692-118711 | Msa1371360:intron | 15.0% |
| !! | TGTTATATTATCATAATCAT+TGG | + | tig0019197:118831-118850 | Msa1371360:intron | 15.0% |
| !! | GTTATATTATCATAATCATT+GGG | + | tig0019197:118832-118851 | Msa1371360:intron | 15.0% |
| !! | TTATTAAAGAAATTAGTAGA+AGG | - | tig0019197:118991-119010 | None:intergenic | 15.0% |
| !! | TATATAAACTATTTATTGGA+TGG | - | tig0019197:119031-119050 | None:intergenic | 15.0% |
| !! | TTTATATATCTAAATCCTTT+GGG | + | tig0019197:119043-119062 | Msa1371360:intron | 15.0% |
| !!! | TCTTTTTCTAAAATTATCAT+CGG | - | tig0019197:119136-119155 | None:intergenic | 15.0% |
| !! | TCATTATGTGTAAATAAATT+AGG | + | tig0019197:119680-119699 | Msa1371360:three_prime_UTR | 15.0% |
| !! | CATTATGTGTAAATAAATTA+GGG | + | tig0019197:119681-119700 | Msa1371360:three_prime_UTR | 15.0% |
| !!! | GAATTTTTATTATAGTTTGC+TGG | + | tig0019197:118012-118031 | Msa1371360:intron | 20.0% |
| !! | TAGTTTATAGCATATGTTTA+TGG | + | tig0019197:118477-118496 | Msa1371360:intron | 20.0% |
| !! | GTTTATATATCTAAATCCTT+TGG | + | tig0019197:119042-119061 | Msa1371360:intron | 20.0% |
| !! | TATCAATAATTCATAGGAAT+AGG | - | tig0019197:119069-119088 | None:intergenic | 20.0% |
| !!! | TGAAAGTATCAATAATTCAT+AGG | - | tig0019197:119075-119094 | None:intergenic | 20.0% |
| !!! | TTTTGCATGATTTTGAATTT+TGG | + | tig0019197:119281-119300 | Msa1371360:intron | 20.0% |
| !! | CGATAAATCAAAGAATAAAA+GGG | - | tig0019197:119418-119437 | None:intergenic | 20.0% |
| !! | TCGATAAATCAAAGAATAAA+AGG | - | tig0019197:119419-119438 | None:intergenic | 20.0% |
| !!! | ATGTACAAATTTTACAGATT+AGG | - | tig0019197:119640-119659 | None:intergenic | 20.0% |
| !!! | GAATTTTTATTATAGTTTGC+TGG | + | tig0019197:118012-118031 | Msa1371360:intron | 20.0% |
| !! | TAGTTTATAGCATATGTTTA+TGG | + | tig0019197:118477-118496 | Msa1371360:intron | 20.0% |
| !! | GTTTATATATCTAAATCCTT+TGG | + | tig0019197:119042-119061 | Msa1371360:intron | 20.0% |
| !! | TATCAATAATTCATAGGAAT+AGG | - | tig0019197:119069-119088 | None:intergenic | 20.0% |
| !!! | TGAAAGTATCAATAATTCAT+AGG | - | tig0019197:119075-119094 | None:intergenic | 20.0% |
| !!! | TTTTGCATGATTTTGAATTT+TGG | + | tig0019197:119281-119300 | Msa1371360:intron | 20.0% |
| !! | CGATAAATCAAAGAATAAAA+GGG | - | tig0019197:119418-119437 | None:intergenic | 20.0% |
| !! | TCGATAAATCAAAGAATAAA+AGG | - | tig0019197:119419-119438 | None:intergenic | 20.0% |
| !!! | ATGTACAAATTTTACAGATT+AGG | - | tig0019197:119640-119659 | None:intergenic | 20.0% |
| !!! | TAAATCTACCCATTTTTTTC+AGG | + | tig0019197:118206-118225 | Msa1371360:intron | 25.0% |
| !! | TAATGGATATCATGCATATT+TGG | - | tig0019197:118235-118254 | None:intergenic | 25.0% |
| ! | TGAACACAAAAAGTGATTAA+TGG | - | tig0019197:118252-118271 | None:intergenic | 25.0% |
| ! | GGTGATTAATTAATGTAACA+AGG | - | tig0019197:118355-118374 | None:intergenic | 25.0% |
| ! | AAATACGACAACAATTTGAA+TGG | - | tig0019197:118417-118436 | None:intergenic | 25.0% |
| ! | AAAAGAACATTAAGAACTTG+TGG | - | tig0019197:118685-118704 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTGGCATTTTTC+TGG | + | tig0019197:118703-118722 | Msa1371360:intron | 25.0% |
| !!! | TTCATTTTTGGCATTTTTCT+GGG | + | tig0019197:118704-118723 | Msa1371360:intron | 25.0% |
| ! | GGAGATATTTCAATTTACAA+TGG | + | tig0019197:118797-118816 | Msa1371360:CDS | 25.0% |
| ! | ATTTCAATTTACAATGGTTC+AGG | + | tig0019197:118803-118822 | Msa1371360:CDS | 25.0% |
| ! | AACATAGAATTATGAACTGT+TGG | + | tig0019197:119379-119398 | Msa1371360:intron | 25.0% |
| !! | TAGCATATCACTTTATGTTT+TGG | - | tig0019197:119599-119618 | None:intergenic | 25.0% |
| ! | AAATAAATTAGGGCTATCAT+TGG | + | tig0019197:119691-119710 | Msa1371360:three_prime_UTR | 25.0% |
| ! | AATGTAATGTATGCAATTGA+AGG | - | tig0019197:119844-119863 | None:intergenic | 25.0% |
| !!! | TAAATCTACCCATTTTTTTC+AGG | + | tig0019197:118206-118225 | Msa1371360:intron | 25.0% |
| !! | TAATGGATATCATGCATATT+TGG | - | tig0019197:118235-118254 | None:intergenic | 25.0% |
| ! | TGAACACAAAAAGTGATTAA+TGG | - | tig0019197:118252-118271 | None:intergenic | 25.0% |
| ! | GGTGATTAATTAATGTAACA+AGG | - | tig0019197:118355-118374 | None:intergenic | 25.0% |
| ! | AAATACGACAACAATTTGAA+TGG | - | tig0019197:118417-118436 | None:intergenic | 25.0% |
| ! | AAAAGAACATTAAGAACTTG+TGG | - | tig0019197:118685-118704 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTGGCATTTTTC+TGG | + | tig0019197:118703-118722 | Msa1371360:intron | 25.0% |
| !!! | TTCATTTTTGGCATTTTTCT+GGG | + | tig0019197:118704-118723 | Msa1371360:intron | 25.0% |
| ! | GGAGATATTTCAATTTACAA+TGG | + | tig0019197:118797-118816 | Msa1371360:CDS | 25.0% |
| ! | ATTTCAATTTACAATGGTTC+AGG | + | tig0019197:118803-118822 | Msa1371360:CDS | 25.0% |
| ! | AACATAGAATTATGAACTGT+TGG | + | tig0019197:119379-119398 | Msa1371360:intron | 25.0% |
| !! | TAGCATATCACTTTATGTTT+TGG | - | tig0019197:119599-119618 | None:intergenic | 25.0% |
| ! | AAATAAATTAGGGCTATCAT+TGG | + | tig0019197:119691-119710 | Msa1371360:three_prime_UTR | 25.0% |
| ! | AATGTAATGTATGCAATTGA+AGG | - | tig0019197:119844-119863 | None:intergenic | 25.0% |
| ! | AAATAGGTTGACCTTTCAAA+AGG | - | tig0019197:118045-118064 | None:intergenic | 30.0% |
| ! | TTTGAAAGGTCAACCTATTT+TGG | + | tig0019197:118045-118064 | Msa1371360:CDS | 30.0% |
| TTTGGACACCTGAAAAAAAT+GGG | - | tig0019197:118217-118236 | None:intergenic | 30.0% | |
| ATTTGGACACCTGAAAAAAA+TGG | - | tig0019197:118218-118237 | None:intergenic | 30.0% | |
| AAGTATACACTTAAAAGTCG+TGG | + | tig0019197:118271-118290 | Msa1371360:intron | 30.0% | |
| TAACACACTTCTACATTGAT+TGG | + | tig0019197:118447-118466 | Msa1371360:intron | 30.0% | |
| !!! | TCATTTTTGGCATTTTTCTG+GGG | + | tig0019197:118705-118724 | Msa1371360:intron | 30.0% |
| AACAGAACAAATATAAGCAG+CGG | + | tig0019197:118742-118761 | Msa1371360:intron | 30.0% | |
| !!! | AATATCAGCTCCTGATTTTT+TGG | + | tig0019197:118899-118918 | Msa1371360:intron | 30.0% |
| CGCTTTGTATAAATAACTCT+TGG | + | tig0019197:118939-118958 | Msa1371360:intron | 30.0% | |
| ! | AGACACACGTTTAATTTCAA+GGG | + | tig0019197:119216-119235 | Msa1371360:intron | 30.0% |
| !! | TATCCATCTCTTGTTGTTAT+TGG | + | tig0019197:119442-119461 | Msa1371360:intron | 30.0% |
| ! | AAATAGGTTGACCTTTCAAA+AGG | - | tig0019197:118045-118064 | None:intergenic | 30.0% |
| ! | TTTGAAAGGTCAACCTATTT+TGG | + | tig0019197:118045-118064 | Msa1371360:CDS | 30.0% |
| TTTGGACACCTGAAAAAAAT+GGG | - | tig0019197:118217-118236 | None:intergenic | 30.0% | |
| ATTTGGACACCTGAAAAAAA+TGG | - | tig0019197:118218-118237 | None:intergenic | 30.0% | |
| AAGTATACACTTAAAAGTCG+TGG | + | tig0019197:118271-118290 | Msa1371360:intron | 30.0% | |
| TAACACACTTCTACATTGAT+TGG | + | tig0019197:118447-118466 | Msa1371360:intron | 30.0% | |
| !!! | TCATTTTTGGCATTTTTCTG+GGG | + | tig0019197:118705-118724 | Msa1371360:intron | 30.0% |
| AACAGAACAAATATAAGCAG+CGG | + | tig0019197:118742-118761 | Msa1371360:intron | 30.0% | |
| !!! | AATATCAGCTCCTGATTTTT+TGG | + | tig0019197:118899-118918 | Msa1371360:intron | 30.0% |
| CGCTTTGTATAAATAACTCT+TGG | + | tig0019197:118939-118958 | Msa1371360:intron | 30.0% | |
| ! | AGACACACGTTTAATTTCAA+GGG | + | tig0019197:119216-119235 | Msa1371360:intron | 30.0% |
| !! | TATCCATCTCTTGTTGTTAT+TGG | + | tig0019197:119442-119461 | Msa1371360:intron | 30.0% |
| ! | CGTTTTCTGCAAACAAAGTA+GGG | - | tig0019197:117659-117678 | None:intergenic | 35.0% |
| ! | TCGTTTTCTGCAAACAAAGT+AGG | - | tig0019197:117660-117679 | None:intergenic | 35.0% |
| ACATTTGCAGAGACTTTGAA+GGG | - | tig0019197:117695-117714 | None:intergenic | 35.0% | |
| AACATTTGCAGAGACTTTGA+AGG | - | tig0019197:117696-117715 | None:intergenic | 35.0% | |
| TCTCGCAAGAAAAAACCATT+TGG | + | tig0019197:117746-117765 | Msa1371360:CDS | 35.0% | |
| ACATCTAATCTTGGACCAAA+TGG | - | tig0019197:117764-117783 | None:intergenic | 35.0% | |
| ATAGTGCTCACATCTAATCT+TGG | - | tig0019197:117773-117792 | None:intergenic | 35.0% | |
| GATTAGATGTGAGCACTATT+TGG | + | tig0019197:117774-117793 | Msa1371360:intron | 35.0% | |
| ATTGAAGTCATGTACAGAGT+AGG | + | tig0019197:117932-117951 | Msa1371360:intron | 35.0% | |
| ! | CTGGATTTGATCCTTTTGAA+AGG | + | tig0019197:118031-118050 | Msa1371360:CDS | 35.0% |
| ATCAAAGAATGGGCCAAAAT+AGG | - | tig0019197:118061-118080 | None:intergenic | 35.0% | |
| !!! | GATATTTTGATCTCAGTCCA+AGG | + | tig0019197:118125-118144 | Msa1371360:intron | 35.0% |
| TCATGATTAATTACGCTCAG+AGG | - | tig0019197:118171-118190 | None:intergenic | 35.0% | |
| GTAAATGACGTTAAAAACCG+TGG | + | tig0019197:118293-118312 | Msa1371360:intron | 35.0% | |
| TTCATGAAACACAGTAACCA+CGG | - | tig0019197:118313-118332 | None:intergenic | 35.0% | |
| CTCTTCTTATGCAGTTTGAA+AGG | + | tig0019197:118518-118537 | Msa1371360:intron | 35.0% | |
| ! | ATAAGACTCGGTAAGTAGAA+TGG | - | tig0019197:118561-118580 | None:intergenic | 35.0% |
| ! | TTCTACTTACCGAGTCTTAT+TGG | + | tig0019197:118561-118580 | Msa1371360:CDS | 35.0% |
| !! | TCTACTTACCGAGTCTTATT+GGG | + | tig0019197:118562-118581 | Msa1371360:CDS | 35.0% |
| GATCATGAGCAGTTTATTTG+TGG | + | tig0019197:118600-118619 | Msa1371360:CDS | 35.0% | |
| TGTGGAGGAGGTAAATAAAA+TGG | + | tig0019197:118618-118637 | Msa1371360:intron | 35.0% | |
| ! | ACAAATATAAGCAGCGGATT+TGG | + | tig0019197:118748-118767 | Msa1371360:CDS | 35.0% |
| ! | CAAATATAAGCAGCGGATTT+GGG | + | tig0019197:118749-118768 | Msa1371360:CDS | 35.0% |
| ACTATCGCTACCAAAAAATC+AGG | - | tig0019197:118912-118931 | None:intergenic | 35.0% | |
| ! | CAGACACACGTTTAATTTCA+AGG | + | tig0019197:119215-119234 | Msa1371360:intron | 35.0% |
| AGTTGTGATCTTACCACATT+GGG | + | tig0019197:119313-119332 | Msa1371360:intron | 35.0% | |
| !! | CATGACTTGGATACATTTTC+TGG | + | tig0019197:119516-119535 | Msa1371360:CDS | 35.0% |
| !!! | ATCACTTTATGTTTTGGCCA+TGG | - | tig0019197:119593-119612 | None:intergenic | 35.0% |
| !! | AACATTTTGGTAAAATGCGC+AGG | - | tig0019197:119742-119761 | None:intergenic | 35.0% |
| ! | GCATTTTACCAAAATGTTGC+AGG | + | tig0019197:119744-119763 | Msa1371360:three_prime_UTR | 35.0% |
| TTTGCACTGTCATTACTCAT+TGG | + | tig0019197:119867-119886 | Msa1371360:three_prime_UTR | 35.0% | |
| ! | CGTTTTCTGCAAACAAAGTA+GGG | - | tig0019197:117659-117678 | None:intergenic | 35.0% |
| ! | TCGTTTTCTGCAAACAAAGT+AGG | - | tig0019197:117660-117679 | None:intergenic | 35.0% |
| ACATTTGCAGAGACTTTGAA+GGG | - | tig0019197:117695-117714 | None:intergenic | 35.0% | |
| AACATTTGCAGAGACTTTGA+AGG | - | tig0019197:117696-117715 | None:intergenic | 35.0% | |
| TCTCGCAAGAAAAAACCATT+TGG | + | tig0019197:117746-117765 | Msa1371360:CDS | 35.0% | |
| ACATCTAATCTTGGACCAAA+TGG | - | tig0019197:117764-117783 | None:intergenic | 35.0% | |
| ATAGTGCTCACATCTAATCT+TGG | - | tig0019197:117773-117792 | None:intergenic | 35.0% | |
| GATTAGATGTGAGCACTATT+TGG | + | tig0019197:117774-117793 | Msa1371360:intron | 35.0% | |
| ATTGAAGTCATGTACAGAGT+AGG | + | tig0019197:117932-117951 | Msa1371360:intron | 35.0% | |
| ! | CTGGATTTGATCCTTTTGAA+AGG | + | tig0019197:118031-118050 | Msa1371360:CDS | 35.0% |
| ATCAAAGAATGGGCCAAAAT+AGG | - | tig0019197:118061-118080 | None:intergenic | 35.0% | |
| !!! | GATATTTTGATCTCAGTCCA+AGG | + | tig0019197:118125-118144 | Msa1371360:intron | 35.0% |
| TCATGATTAATTACGCTCAG+AGG | - | tig0019197:118171-118190 | None:intergenic | 35.0% | |
| GTAAATGACGTTAAAAACCG+TGG | + | tig0019197:118293-118312 | Msa1371360:intron | 35.0% | |
| TTCATGAAACACAGTAACCA+CGG | - | tig0019197:118313-118332 | None:intergenic | 35.0% | |
| CTCTTCTTATGCAGTTTGAA+AGG | + | tig0019197:118518-118537 | Msa1371360:intron | 35.0% | |
| ! | ATAAGACTCGGTAAGTAGAA+TGG | - | tig0019197:118561-118580 | None:intergenic | 35.0% |
| ! | TTCTACTTACCGAGTCTTAT+TGG | + | tig0019197:118561-118580 | Msa1371360:CDS | 35.0% |
| !! | TCTACTTACCGAGTCTTATT+GGG | + | tig0019197:118562-118581 | Msa1371360:CDS | 35.0% |
| GATCATGAGCAGTTTATTTG+TGG | + | tig0019197:118600-118619 | Msa1371360:CDS | 35.0% | |
| TGTGGAGGAGGTAAATAAAA+TGG | + | tig0019197:118618-118637 | Msa1371360:intron | 35.0% | |
| ! | ACAAATATAAGCAGCGGATT+TGG | + | tig0019197:118748-118767 | Msa1371360:CDS | 35.0% |
| ! | CAAATATAAGCAGCGGATTT+GGG | + | tig0019197:118749-118768 | Msa1371360:CDS | 35.0% |
| ACTATCGCTACCAAAAAATC+AGG | - | tig0019197:118912-118931 | None:intergenic | 35.0% | |
| ! | CAGACACACGTTTAATTTCA+AGG | + | tig0019197:119215-119234 | Msa1371360:intron | 35.0% |
| AGTTGTGATCTTACCACATT+GGG | + | tig0019197:119313-119332 | Msa1371360:intron | 35.0% | |
| !! | CATGACTTGGATACATTTTC+TGG | + | tig0019197:119516-119535 | Msa1371360:CDS | 35.0% |
| !!! | ATCACTTTATGTTTTGGCCA+TGG | - | tig0019197:119593-119612 | None:intergenic | 35.0% |
| !! | AACATTTTGGTAAAATGCGC+AGG | - | tig0019197:119742-119761 | None:intergenic | 35.0% |
| ! | GCATTTTACCAAAATGTTGC+AGG | + | tig0019197:119744-119763 | Msa1371360:three_prime_UTR | 35.0% |
| TTTGCACTGTCATTACTCAT+TGG | + | tig0019197:119867-119886 | Msa1371360:three_prime_UTR | 35.0% | |
| TCCTCCTGAGCTAAATTCAA+AGG | + | tig0019197:117547-117566 | Msa1371360:five_prime_UTR | 40.0% | |
| ! | TCCTTTGAATTTAGCTCAGG+AGG | - | tig0019197:117551-117570 | None:intergenic | 40.0% |
| ! | GCTTCCTTTGAATTTAGCTC+AGG | - | tig0019197:117554-117573 | None:intergenic | 40.0% |
| TTTCTGCAAACAAAGTAGGG+CGG | - | tig0019197:117656-117675 | None:intergenic | 40.0% | |
| ! | TCAATTCCATAGTCTTGACG+AGG | - | tig0019197:117917-117936 | None:intergenic | 40.0% |
| TTTGGCCCATTCTTTGATCT+CGG | + | tig0019197:118063-118082 | Msa1371360:CDS | 40.0% | |
| GATTAATTACGCTCAGAGGA+TGG | - | tig0019197:118167-118186 | None:intergenic | 40.0% | |
| ATTTGTCAATCACGTTCAGC+AGG | - | tig0019197:118376-118395 | None:intergenic | 40.0% | |
| CATGAGCAGTTTATTTGTGG+AGG | + | tig0019197:118603-118622 | Msa1371360:CDS | 40.0% | |
| ! | ACTTGTGGCAGTGACTTTTT+GGG | - | tig0019197:118670-118689 | None:intergenic | 40.0% |
| ! | AACTTGTGGCAGTGACTTTT+TGG | - | tig0019197:118671-118690 | None:intergenic | 40.0% |
| TGAAATATCTCCTCTTCCTC+TGG | - | tig0019197:118789-118808 | None:intergenic | 40.0% | |
| ATTCATAGGAATAGGCCCAA+AGG | - | tig0019197:119061-119080 | None:intergenic | 40.0% | |
| AACGTGTGTCTGATATGTGT+TGG | - | tig0019197:119207-119226 | None:intergenic | 40.0% | |
| ! | ACACGTTTAATTTCAAGGGC+CGG | + | tig0019197:119220-119239 | Msa1371360:intron | 40.0% |
| AGTATAGACCTGTGTAACAC+CGG | - | tig0019197:119242-119261 | None:intergenic | 40.0% | |
| GAGTTGTGATCTTACCACAT+TGG | + | tig0019197:119312-119331 | Msa1371360:intron | 40.0% | |
| AATCATCTAGCTACCCAATG+TGG | - | tig0019197:119329-119348 | None:intergenic | 40.0% | |
| CTGCCAATAACAACAAGAGA+TGG | - | tig0019197:119448-119467 | None:intergenic | 40.0% | |
| !! | TCTCTTGTTGTTATTGGCAG+CGG | + | tig0019197:119448-119467 | Msa1371360:intron | 40.0% |
| ! | GACTTGGATACATTTTCTGG+TGG | + | tig0019197:119519-119538 | Msa1371360:CDS | 40.0% |
| CTGTTTACATTGGATCAGCA+AGG | - | tig0019197:119718-119737 | None:intergenic | 40.0% | |
| GAGTATAAGCGTGTAACACA+TGG | - | tig0019197:119775-119794 | None:intergenic | 40.0% | |
| TCCTCCTGAGCTAAATTCAA+AGG | + | tig0019197:117547-117566 | Msa1371360:five_prime_UTR | 40.0% | |
| ! | TCCTTTGAATTTAGCTCAGG+AGG | - | tig0019197:117551-117570 | None:intergenic | 40.0% |
| ! | GCTTCCTTTGAATTTAGCTC+AGG | - | tig0019197:117554-117573 | None:intergenic | 40.0% |
| TTTCTGCAAACAAAGTAGGG+CGG | - | tig0019197:117656-117675 | None:intergenic | 40.0% | |
| ! | TCAATTCCATAGTCTTGACG+AGG | - | tig0019197:117917-117936 | None:intergenic | 40.0% |
| TTTGGCCCATTCTTTGATCT+CGG | + | tig0019197:118063-118082 | Msa1371360:CDS | 40.0% | |
| GATTAATTACGCTCAGAGGA+TGG | - | tig0019197:118167-118186 | None:intergenic | 40.0% | |
| ATTTGTCAATCACGTTCAGC+AGG | - | tig0019197:118376-118395 | None:intergenic | 40.0% | |
| CATGAGCAGTTTATTTGTGG+AGG | + | tig0019197:118603-118622 | Msa1371360:CDS | 40.0% | |
| ! | ACTTGTGGCAGTGACTTTTT+GGG | - | tig0019197:118670-118689 | None:intergenic | 40.0% |
| ! | AACTTGTGGCAGTGACTTTT+TGG | - | tig0019197:118671-118690 | None:intergenic | 40.0% |
| TGAAATATCTCCTCTTCCTC+TGG | - | tig0019197:118789-118808 | None:intergenic | 40.0% | |
| ATTCATAGGAATAGGCCCAA+AGG | - | tig0019197:119061-119080 | None:intergenic | 40.0% | |
| AACGTGTGTCTGATATGTGT+TGG | - | tig0019197:119207-119226 | None:intergenic | 40.0% | |
| ! | ACACGTTTAATTTCAAGGGC+CGG | + | tig0019197:119220-119239 | Msa1371360:intron | 40.0% |
| AGTATAGACCTGTGTAACAC+CGG | - | tig0019197:119242-119261 | None:intergenic | 40.0% | |
| GAGTTGTGATCTTACCACAT+TGG | + | tig0019197:119312-119331 | Msa1371360:intron | 40.0% | |
| AATCATCTAGCTACCCAATG+TGG | - | tig0019197:119329-119348 | None:intergenic | 40.0% | |
| CTGCCAATAACAACAAGAGA+TGG | - | tig0019197:119448-119467 | None:intergenic | 40.0% | |
| !! | TCTCTTGTTGTTATTGGCAG+CGG | + | tig0019197:119448-119467 | Msa1371360:intron | 40.0% |
| ! | GACTTGGATACATTTTCTGG+TGG | + | tig0019197:119519-119538 | Msa1371360:CDS | 40.0% |
| CTGTTTACATTGGATCAGCA+AGG | - | tig0019197:119718-119737 | None:intergenic | 40.0% | |
| GAGTATAAGCGTGTAACACA+TGG | - | tig0019197:119775-119794 | None:intergenic | 40.0% | |
| CGAAGACATACGATGTCGTT+TGG | + | tig0019197:117605-117624 | Msa1371360:exon | 45.0% | |
| CAGTCAGAAGAGAGAAAGTC+GGG | - | tig0019197:117719-117738 | None:intergenic | 45.0% | |
| CCAGTCAGAAGAGAGAAAGT+CGG | - | tig0019197:117720-117739 | None:intergenic | 45.0% | |
| CCTGACCGAGATCAAAGAAT+GGG | - | tig0019197:118071-118090 | None:intergenic | 45.0% | |
| ACCTGACCGAGATCAAAGAA+TGG | - | tig0019197:118072-118091 | None:intergenic | 45.0% | |
| CCTTGTGACCCAATAAGACT+CGG | - | tig0019197:118573-118592 | None:intergenic | 45.0% | |
| GAGCAGTTTATTTGTGGAGG+AGG | + | tig0019197:118606-118625 | Msa1371360:CDS | 45.0% | |
| !! | CTCTTGTTGTTATTGGCAGC+GGG | + | tig0019197:119449-119468 | Msa1371360:intron | 45.0% |
| AGAGTCTCTGCTTCATGACT+TGG | + | tig0019197:119503-119522 | Msa1371360:CDS | 45.0% | |
| GTCAGTTTCATGAAGCTCCA+TGG | + | tig0019197:119573-119592 | Msa1371360:three_prime_UTR | 45.0% | |
| ATGCGCAGGACTGTTTACAT+TGG | - | tig0019197:119728-119747 | None:intergenic | 45.0% | |
| CGAAGACATACGATGTCGTT+TGG | + | tig0019197:117605-117624 | Msa1371360:exon | 45.0% | |
| CAGTCAGAAGAGAGAAAGTC+GGG | - | tig0019197:117719-117738 | None:intergenic | 45.0% | |
| CCAGTCAGAAGAGAGAAAGT+CGG | - | tig0019197:117720-117739 | None:intergenic | 45.0% | |
| CCTGACCGAGATCAAAGAAT+GGG | - | tig0019197:118071-118090 | None:intergenic | 45.0% | |
| ACCTGACCGAGATCAAAGAA+TGG | - | tig0019197:118072-118091 | None:intergenic | 45.0% | |
| CCTTGTGACCCAATAAGACT+CGG | - | tig0019197:118573-118592 | None:intergenic | 45.0% | |
| GAGCAGTTTATTTGTGGAGG+AGG | + | tig0019197:118606-118625 | Msa1371360:CDS | 45.0% | |
| !! | CTCTTGTTGTTATTGGCAGC+GGG | + | tig0019197:119449-119468 | Msa1371360:intron | 45.0% |
| AGAGTCTCTGCTTCATGACT+TGG | + | tig0019197:119503-119522 | Msa1371360:CDS | 45.0% | |
| GTCAGTTTCATGAAGCTCCA+TGG | + | tig0019197:119573-119592 | Msa1371360:three_prime_UTR | 45.0% | |
| ATGCGCAGGACTGTTTACAT+TGG | - | tig0019197:119728-119747 | None:intergenic | 45.0% | |
| ! | TTTAGCTCAGGAGGATGACG+AGG | - | tig0019197:117542-117561 | None:intergenic | 50.0% |
| ACAAAGTAGGGCGGAGAAGA+AGG | - | tig0019197:117647-117666 | None:intergenic | 50.0% | |
| ! | TGCAGAGACTTTGAAGGGAG+AGG | - | tig0019197:117690-117709 | None:intergenic | 50.0% |
| CCGACTTTCTCTCTTCTGAC+TGG | + | tig0019197:117717-117736 | Msa1371360:CDS | 50.0% | |
| ! | TTCCATAGTCTTGACGAGGC+TGG | - | tig0019197:117913-117932 | None:intergenic | 50.0% |
| CCCATTCTTTGATCTCGGTC+AGG | + | tig0019197:118068-118087 | Msa1371360:CDS | 50.0% | |
| GTTACTGAGTTGCGACACCT+TGG | - | tig0019197:118145-118164 | None:intergenic | 50.0% | |
| !! | CCGAGTCTTATTGGGTCACA+AGG | + | tig0019197:118570-118589 | Msa1371360:CDS | 50.0% |
| ! | TGTTGTTATTGGCAGCGGGT+TGG | + | tig0019197:119453-119472 | Msa1371360:intron | 50.0% |
| GTGGTTGCTGGGATGGTTAT+TGG | + | tig0019197:119475-119494 | Msa1371360:CDS | 50.0% | |
| ! | TGGCGACTCCTGCAACATTT+TGG | - | tig0019197:119755-119774 | None:intergenic | 50.0% |
| ! | TTTAGCTCAGGAGGATGACG+AGG | - | tig0019197:117542-117561 | None:intergenic | 50.0% |
| ACAAAGTAGGGCGGAGAAGA+AGG | - | tig0019197:117647-117666 | None:intergenic | 50.0% | |
| ! | TGCAGAGACTTTGAAGGGAG+AGG | - | tig0019197:117690-117709 | None:intergenic | 50.0% |
| CCGACTTTCTCTCTTCTGAC+TGG | + | tig0019197:117717-117736 | Msa1371360:CDS | 50.0% | |
| ! | TTCCATAGTCTTGACGAGGC+TGG | - | tig0019197:117913-117932 | None:intergenic | 50.0% |
| CCCATTCTTTGATCTCGGTC+AGG | + | tig0019197:118068-118087 | Msa1371360:CDS | 50.0% | |
| GTTACTGAGTTGCGACACCT+TGG | - | tig0019197:118145-118164 | None:intergenic | 50.0% | |
| !! | CCGAGTCTTATTGGGTCACA+AGG | + | tig0019197:118570-118589 | Msa1371360:CDS | 50.0% |
| ! | TGTTGTTATTGGCAGCGGGT+TGG | + | tig0019197:119453-119472 | Msa1371360:intron | 50.0% |
| GTGGTTGCTGGGATGGTTAT+TGG | + | tig0019197:119475-119494 | Msa1371360:CDS | 50.0% | |
| ! | TGGCGACTCCTGCAACATTT+TGG | - | tig0019197:119755-119774 | None:intergenic | 50.0% |
| GACCAGCCTCGTCAAGACTA+TGG | + | tig0019197:117908-117927 | Msa1371360:CDS | 55.0% | |
| ! | AAGCAGCGGATTTGGGTTCG+AGG | + | tig0019197:118756-118775 | Msa1371360:CDS | 55.0% |
| AGGAAGTCGACCAGAGGAAG+AGG | + | tig0019197:118776-118795 | Msa1371360:CDS | 55.0% | |
| !! | TTCAAGGGCCGGTGTTACAC+AGG | + | tig0019197:119231-119250 | Msa1371360:intron | 55.0% |
| !! | TGTTATTGGCAGCGGGTTGG+TGG | + | tig0019197:119456-119475 | Msa1371360:intron | 55.0% |
| GACCAGCCTCGTCAAGACTA+TGG | + | tig0019197:117908-117927 | Msa1371360:CDS | 55.0% | |
| ! | AAGCAGCGGATTTGGGTTCG+AGG | + | tig0019197:118756-118775 | Msa1371360:CDS | 55.0% |
| AGGAAGTCGACCAGAGGAAG+AGG | + | tig0019197:118776-118795 | Msa1371360:CDS | 55.0% | |
| !! | TTCAAGGGCCGGTGTTACAC+AGG | + | tig0019197:119231-119250 | Msa1371360:intron | 55.0% |
| !! | TGTTATTGGCAGCGGGTTGG+TGG | + | tig0019197:119456-119475 | Msa1371360:intron | 55.0% |
| GGTTCGAGGAAGTCGACCAG+AGG | + | tig0019197:118770-118789 | Msa1371360:CDS | 60.0% | |
| GGTTCGAGGAAGTCGACCAG+AGG | + | tig0019197:118770-118789 | Msa1371360:CDS | 60.0% | |
| !! | GCAGCGGGTTGGTGGTTGCT+GGG | + | tig0019197:119464-119483 | Msa1371360:intron | 65.0% |
| !! | CGGGTTGGTGGTTGCTGGGA+TGG | + | tig0019197:119468-119487 | Msa1371360:CDS | 65.0% |
| !! | GCAGCGGGTTGGTGGTTGCT+GGG | + | tig0019197:119464-119483 | Msa1371360:intron | 65.0% |
| !! | CGGGTTGGTGGTTGCTGGGA+TGG | + | tig0019197:119468-119487 | Msa1371360:CDS | 65.0% |
| !! | GGCAGCGGGTTGGTGGTTGC+TGG | + | tig0019197:119463-119482 | Msa1371360:intron | 70.0% |
| !! | GGCAGCGGGTTGGTGGTTGC+TGG | + | tig0019197:119463-119482 | Msa1371360:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019197 | gene | 117519 | 119912 | 117519 | ID=Msa1371360;Name=Msa1371360 |
| tig0019197 | mRNA | 117519 | 119912 | 117519 | ID=Msa1371360-mRNA-1;Parent=Msa1371360;Name=Msa1371360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=98|1|1|1|1|1|6|358|193 |
| tig0019197 | exon | 117519 | 117781 | 117519 | ID=Msa1371360-mRNA-1:exon:2149;Parent=Msa1371360-mRNA-1 |
| tig0019197 | exon | 117857 | 117949 | 117857 | ID=Msa1371360-mRNA-1:exon:2150;Parent=Msa1371360-mRNA-1 |
| tig0019197 | exon | 118027 | 118089 | 118027 | ID=Msa1371360-mRNA-1:exon:2151;Parent=Msa1371360-mRNA-1 |
| tig0019197 | exon | 118532 | 118627 | 118532 | ID=Msa1371360-mRNA-1:exon:2152;Parent=Msa1371360-mRNA-1 |
| tig0019197 | exon | 118747 | 118824 | 118747 | ID=Msa1371360-mRNA-1:exon:2153;Parent=Msa1371360-mRNA-1 |
| tig0019197 | exon | 119468 | 119912 | 119468 | ID=Msa1371360-mRNA-1:exon:2154;Parent=Msa1371360-mRNA-1 |
| tig0019197 | five_prime_UTR | 117519 | 117616 | 117519 | ID=Msa1371360-mRNA-1:five_prime_utr;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 117617 | 117781 | 117617 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 117857 | 117949 | 117857 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 118027 | 118089 | 118027 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 118532 | 118627 | 118532 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 118747 | 118824 | 118747 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | CDS | 119468 | 119554 | 119468 | ID=Msa1371360-mRNA-1:cds;Parent=Msa1371360-mRNA-1 |
| tig0019197 | three_prime_UTR | 119555 | 119912 | 119555 | ID=Msa1371360-mRNA-1:three_prime_utr;Parent=Msa1371360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
