AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378700 MtrunA17_Chr3g0131711 99.458 922 5 0 1 922 1 922 0.0 1854
Msa0378700 MtrunA17_Chr8g0385811 90.281 926 86 2 1 922 1 926 0.0 1661
Msa0378700 MtrunA17_Chr3g0134631 90.076 927 87 3 1 922 1 927 0.0 1652
Msa0378700 MtrunA17_Chr3g0135231 72.431 613 133 7 1 604 1 586 0.0 842
Msa0378700 MtrunA17_Chr3g0135231 68.966 116 26 1 710 825 545 650 8.84e-39 154
Msa0378700 MtrunA17_Chr3g0102771 51.208 869 305 12 91 916 1 793 0.0 835
Msa0378700 MtrunA17_Chr3g0131351 47.126 870 409 14 91 916 100 962 0.0 763
Msa0378700 MtrunA17_Chr3g0137071 44.751 905 397 16 67 898 75 949 0.0 723
Msa0378700 MtrunA17_Chr7g0218421 44.773 880 387 14 93 898 86 940 0.0 720
Msa0378700 MtrunA17_Chr6g0454071 42.919 925 418 18 73 916 55 950 0.0 691
Msa0378700 MtrunA17_Chr4g0061371 41.961 877 420 15 93 902 4 858 0.0 650
Msa0378700 MtrunA17_Chr7g0225161 42.386 880 415 18 94 905 5 860 0.0 620
Msa0378700 MtrunA17_Chr2g0329561 41.818 330 175 3 577 905 143 456 1.38e-78 263
Msa0378700 MtrunA17_Chr2g0277781 44.257 296 147 4 577 870 2 281 2.92e-77 254
Msa0378700 MtrunA17_Chr1g0188061 74.797 123 28 1 124 243 20 142 4.33e-48 174
Msa0378700 MtrunA17_Chr1g0188061 65.891 129 33 2 665 793 232 349 5.77e-42 157
Msa0378700 MtrunA17_Chr1g0188061 48.913 92 17 1 410 501 153 214 3.01e-16 81.3
Msa0378700 MtrunA17_Chr7g0260931 50.000 84 42 0 574 657 11 94 1.47e-23 95.9
Msa0378700 MtrunA17_Chr2g0277771 31.373 153 88 3 754 905 1 137 5.47e-16 77.0
Msa0378700 MtrunA17_Chr5g0398561 28.571 161 105 4 68 220 56 214 3.00e-14 73.2
Msa0378700 MtrunA17_Chr4g0073021 28.743 167 108 3 592 757 658 814 2.64e-12 71.2
Msa0378700 MtrunA17_Chr6g0475931 31.496 127 85 1 94 218 89 215 2.06e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378700 AT5G50920.1 88.013 926 100 4 3 919 6 929 0.0 1589
Msa0378700 AT3G48870.2 85.779 879 125 0 33 911 25 903 0.0 1497
Msa0378700 AT3G48870.1 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378700 AT3G48870.4 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378700 AT3G48870.3 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378700 AT5G51070.1 48.677 869 390 13 79 902 67 924 0.0 782
Msa0378700 AT5G15450.1 45.205 876 388 13 93 898 80 933 0.0 715
Msa0378700 AT2G25140.1 44.570 884 396 13 95 905 88 950 0.0 714
Msa0378700 AT1G74310.1 42.466 876 402 15 93 896 4 849 0.0 660
Msa0378700 AT1G74310.2 42.908 839 377 15 93 859 4 812 0.0 637
Msa0378700 AT4G14670.1 43.739 567 242 9 186 695 77 623 7.56e-143 438
Msa0378700 AT3G45450.1 61.370 365 94 7 91 453 1 320 1.66e-125 383
Msa0378700 AT4G30350.1 30.675 163 103 2 595 757 568 720 6.36e-12 70.1

Find 284 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACTGTATTCCTAGTTTA+TGG 0.129930 3_1:+79530668 Msa0378700:three_prime_UTR
TCTTGACATGAGTGAGTTTA+TGG 0.134853 3_1:+79529434 Msa0378700:CDS
CTTCCACTCGTGCATCTTTA+AGG 0.139989 3_1:-79524842 None:intergenic
TTCAAGTAACAGAAAGATTT+AGG 0.174960 3_1:+79529952 Msa0378700:CDS
TTCTGCGAGCTTGGTCAAAT+TGG 0.206976 3_1:-79526120 None:intergenic
TGGTGCGACGGCCTAAAATT+TGG 0.209026 3_1:-79526285 None:intergenic
CACACTGTCTCCAAACTTAT+TGG 0.210042 3_1:+79529462 Msa0378700:CDS
ATTTCAGGGCACAATTATAT+TGG 0.228980 3_1:+79525797 Msa0378700:intron
GGGAATCATGGCTCGGGTTT+TGG 0.234926 3_1:+79524401 Msa0378700:exon
CGCATGATGGCTCTTCTTAA+AGG 0.235677 3_1:-79530020 None:intergenic
AAGAGCCATCATGCGACTTT+TGG 0.245921 3_1:+79530028 Msa0378700:CDS
CAGATTCTACTGGGTCTTAT+TGG 0.247254 3_1:+79524771 Msa0378700:CDS
AGCAAATCAAGTTCAGAAAA+AGG 0.253058 3_1:+79530326 Msa0378700:three_prime_UTR
GATGAAGTGCACACACTAAT+TGG 0.268640 3_1:+79526913 Msa0378700:CDS
AATAAATACAGCCGGATATT+CGG 0.273092 3_1:+79524380 Msa0378700:intron
GTGGAAGTGGAGAAGATAAT+TGG 0.274857 3_1:+79524858 Msa0378700:CDS
ATCTTCATCCATGGCTATTT+CGG 0.281475 3_1:+79530446 Msa0378700:three_prime_UTR
CTCAAATTTCCCTGAATTTG+TGG 0.296159 3_1:-79530590 None:intergenic
AACTTTCATACCAGTATATC+AGG 0.299224 3_1:+79527552 Msa0378700:CDS
TGTATGACAACCACAAATTC+AGG 0.303508 3_1:+79530580 Msa0378700:three_prime_UTR
GTGATAAAGAAATGGATCTA+AGG 0.316162 3_1:+79529031 Msa0378700:CDS
GCATTGGCTGCCTACTACTT+TGG 0.322084 3_1:+79529390 Msa0378700:CDS
GTTGGTTCTGGTACTTTAAC+TGG 0.328169 3_1:-79527431 None:intergenic
GGATCAGAACACTTGCTTCT+AGG 0.330589 3_1:+79525818 Msa0378700:CDS
CGCTTTGCACGAGGAGTAAA+CGG 0.343489 3_1:-79524912 None:intergenic
GGTGCGACGGCCTAAAATTT+GGG 0.348667 3_1:-79526284 None:intergenic
GCTCAGTCGATTAATGTTCC+TGG 0.349711 3_1:+79524423 Msa0378700:CDS
CCGTTAGTCTTCCATCTTCA+AGG 0.351323 3_1:-79529620 None:intergenic
ATAAATACAGCCGGATATTC+GGG 0.355246 3_1:+79524381 Msa0378700:intron
TGTACAGGGTTGCATGTCTT+AGG 0.356462 3_1:+79530636 Msa0378700:three_prime_UTR
TCAAGTAACAGAAAGATTTA+GGG 0.359184 3_1:+79529953 Msa0378700:CDS
ACACCAACTTTGGAGGAGTA+TGG 0.360599 3_1:+79526095 Msa0378700:CDS
TAAACAGTATGATGCTCTAT+TGG 0.360807 3_1:-79523489 None:intergenic
CAAGGAGGTGCTTGCTGATA+AGG 0.361145 3_1:-79523673 None:intergenic
AAGCTAGCAATTGGACGGTT+AGG 0.361474 3_1:-79529321 None:intergenic
ACTTCGTACTATCAATCATT+TGG 0.363357 3_1:+79524560 Msa0378700:CDS
TTAAATATTATGCAGTGTAT+TGG 0.363497 3_1:+79527341 Msa0378700:intron
GTTTCATCAACAGTTGGTTC+TGG 0.366287 3_1:-79527443 None:intergenic
TTTCAGGCAACTCACAAAAC+TGG 0.379537 3_1:+79529860 Msa0378700:CDS
AGGAGGTGAACCAATAAGTT+TGG 0.381503 3_1:-79529472 None:intergenic
AATAAAATTGTGGTGGCAAA+TGG 0.381512 3_1:-79523582 None:intergenic
TGGAATCGTCTCTCCAAAGC+TGG 0.385694 3_1:-79527407 None:intergenic
AGCAGCATCAATTGCACCTT+CGG 0.387475 3_1:-79526947 None:intergenic
AAGATAATTGGAAGAGGTAG+TGG 0.390234 3_1:+79524870 Msa0378700:CDS
TCGACAAGTAAAACATACTA+TGG 0.391976 3_1:-79530249 None:intergenic
GTTAACATTATAGGAATAAG+TGG 0.399890 3_1:+79530350 Msa0378700:three_prime_UTR
TCATGACAAACCTGATATAC+TGG 0.400165 3_1:-79527562 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 3_1:-79527465 None:intergenic
CCTTGTCTTATTGGAGAACC+TGG 0.409018 3_1:+79526316 Msa0378700:CDS
GAGAAAGGAGGTCGCCGAAT+TGG 0.410502 3_1:+79529717 Msa0378700:CDS
CTGCTAAGGGAAAACGTGAC+TGG 0.410535 3_1:-79530300 None:intergenic
AATCAAATCAATGGCTTTGT+CGG 0.411132 3_1:-79528266 None:intergenic
CTTGATTTGCTAGGCTGCTA+AGG 0.413276 3_1:-79530314 None:intergenic
ATGTTCCTGGTCTAGTGGTT+GGG 0.414455 3_1:+79524436 Msa0378700:CDS
ACTTTACACAAGCGAGTCAT+TGG 0.414627 3_1:+79529234 Msa0378700:CDS
AAACTTATTGGTTCACCTCC+TGG 0.414825 3_1:+79529474 Msa0378700:CDS
TCCATGGCTATTTCGGAAGT+TGG 0.416138 3_1:+79530453 Msa0378700:three_prime_UTR
ACCTGTCCCTCAGGGAAAGT+TGG 0.421323 3_1:+79526222 Msa0378700:intron
AATGTTGTCCCGCAATGTAC+AGG 0.427336 3_1:+79530621 Msa0378700:three_prime_UTR
TTAAGAATGCCAGGTTTCTC+AGG 0.429731 3_1:+79524537 Msa0378700:CDS
GCAATACTATACAGCAATGC+TGG 0.430704 3_1:-79530518 None:intergenic
CATTACCTCTTCTGCGAGCT+TGG 0.431461 3_1:-79526129 None:intergenic
GAAGATTGTTAAAGAGAAAG+AGG 0.432645 3_1:+79528478 Msa0378700:CDS
TAACAATAAAACACCAACTT+TGG 0.433480 3_1:+79526085 Msa0378700:CDS
CAATTTCTACACGGCGGGCA+AGG 0.434847 3_1:+79524631 Msa0378700:CDS
AATGTTCCTGGTCTAGTGGT+TGG 0.435674 3_1:+79524435 Msa0378700:CDS
TCCTCGTGCAAAGCGTGTAT+TGG 0.436138 3_1:+79524920 Msa0378700:CDS
TTATAATAGAATCAAGAGTT+TGG 0.437499 3_1:+79529773 Msa0378700:CDS
AGCCATGATTCCCGAATATC+CGG 0.440884 3_1:-79524391 None:intergenic
GAAAAGATGAAGCTAGCAAT+TGG 0.446933 3_1:-79529330 None:intergenic
TGTGGCTGTCTTCCCACAAC+AGG 0.448929 3_1:-79526247 None:intergenic
GTCACCCTCTTTGATCTCTC+TGG 0.449102 3_1:-79530078 None:intergenic
ATTATAGGAATAAGTGGGAT+AGG 0.450568 3_1:+79530356 Msa0378700:three_prime_UTR
CTCGAGGAAGCTCGCCAACT+TGG 0.453993 3_1:+79524951 Msa0378700:CDS
AGGTCTTCTTCGAGAGGGTG+AGG 0.455712 3_1:+79525838 Msa0378700:CDS
AGCTAGCAATTGGACGGTTA+GGG 0.456523 3_1:-79529320 None:intergenic
AGGAACTAAAACAATACTTC+AGG 0.457240 3_1:+79529802 Msa0378700:CDS
AGCCATGTTTGAGCGTTTCA+CGG 0.458933 3_1:+79524674 Msa0378700:CDS
TATTAGTAGGATCAGCGCCC+AGG 0.460369 3_1:-79525886 None:intergenic
GGTTCACCTCCTGGATATGT+TGG 0.462266 3_1:+79529483 Msa0378700:CDS
TGGAACAGAGCAGATTCTAC+TGG 0.466157 3_1:+79524761 Msa0378700:CDS
CATGCAACCCTGTACATTGC+GGG 0.466323 3_1:-79530629 None:intergenic
GTTCTGGTACTTTAACTGGC+TGG 0.466695 3_1:-79527427 None:intergenic
ATGTCAACTTCAGTCACAAT+AGG 0.466713 3_1:-79529126 None:intergenic
GCACAAGCAAAGTCAACATA+AGG 0.467412 3_1:+79524458 Msa0378700:CDS
TAACAGAAAGATTTAGGGAC+AGG 0.469450 3_1:+79529958 Msa0378700:CDS
AGCATCATGTTGAATACATC+AGG 0.469700 3_1:-79529591 None:intergenic
TCCCATAGACTTTAAAACCT+TGG 0.470278 3_1:-79524814 None:intergenic
AGTTCGCCTCTTGCAAGAGC+TGG 0.472521 3_1:-79526982 None:intergenic
AGCCCGTGTTCTTGAAAACC+TGG 0.474778 3_1:+79525868 Msa0378700:CDS
AGAACTACGTGATAAAGAAA+TGG 0.474958 3_1:+79529023 Msa0378700:CDS
TAAATACCGTGGTGAGTTTG+AGG 0.476180 3_1:+79526831 Msa0378700:CDS
TGTTACTGCTACTGTTGGCT+CGG 0.477023 3_1:+79526055 Msa0378700:CDS
ATCAAATCAATGGCTTTGTC+GGG 0.478982 3_1:-79528265 None:intergenic
AGAGGGTGACTCCGTAATAG+TGG 0.479834 3_1:+79530091 Msa0378700:CDS
TTATAGGAATAAGTGGGATA+GGG 0.480320 3_1:+79530357 Msa0378700:three_prime_UTR
TTCAACATATCGTGTCCTCC+TGG 0.480428 3_1:+79529148 Msa0378700:CDS
CAAGAGGAGGCAAGGCGTCT+TGG 0.480892 3_1:+79524726 Msa0378700:CDS
CTTATAATGACGTCAAATGT+TGG 0.481358 3_1:+79529681 Msa0378700:CDS
TCTGCTGAGACTTTATCAAC+AGG 0.481392 3_1:-79529180 None:intergenic
TCTTGCAAGAGGCGAACTAC+AGG 0.482034 3_1:+79526987 Msa0378700:CDS
TCAAAGAGTACAACAGTGTA+AGG 0.482911 3_1:-79529549 None:intergenic
AAATAGCAGACATAATGCTC+AGG 0.485233 3_1:+79529892 Msa0378700:CDS
ACTCATGTCAAGACGAATCA+TGG 0.485591 3_1:-79529424 None:intergenic
CTTGCTCAGCGGATTGCAAA+TGG 0.488742 3_1:+79526367 Msa0378700:CDS
GTAGTAGGCAGCCAATGCTT+TGG 0.489027 3_1:-79529385 None:intergenic
GGAATCAACATCCACTATTA+CGG 0.489265 3_1:-79530102 None:intergenic
AGCTTCATCAATCAAATCAA+TGG 0.489376 3_1:-79528275 None:intergenic
AGCCGGATATTCGGGAATCA+TGG 0.492140 3_1:+79524389 Msa0378700:intron
GATGGCTCTTCTTAAAGGCC+TGG 0.492279 3_1:-79530015 None:intergenic
CAAAGTCAACATAAGGGATC+GGG 0.495246 3_1:+79524465 Msa0378700:CDS
CATTATATAGCAAGAGCCTC+TGG 0.496204 3_1:-79530176 None:intergenic
GTCTGAATTGGCCAAAGCAT+TGG 0.497656 3_1:+79529374 Msa0378700:CDS
TAAAGATGCACGAGTGGAAG+TGG 0.498088 3_1:+79524845 Msa0378700:CDS
AATCAAGATCGAATCCAATT+CGG 0.500880 3_1:-79529731 None:intergenic
ATAATATGATAGAGGAAGGA+AGG 0.502742 3_1:-79523619 None:intergenic
AAGAACTTGACAAGGAGGTC+AGG 0.505480 3_1:+79528456 Msa0378700:CDS
GTCGGGCTATCCGTCGAGCA+CGG 0.505534 3_1:+79529283 Msa0378700:CDS
GTTCCATACTCCTCCAAAGT+TGG 0.506275 3_1:-79526098 None:intergenic
GATCTGTATATGACATGCCT+TGG 0.506705 3_1:+79530415 Msa0378700:three_prime_UTR
TATAGGAATAAGTGGGATAG+GGG 0.511778 3_1:+79530358 Msa0378700:three_prime_UTR
TTATTGGAGAACCTGGTGTT+GGG 0.513026 3_1:+79526323 Msa0378700:CDS
TGTTCTTGAAATCCACAGTT+CGG 0.514426 3_1:-79529653 None:intergenic
ATCTGATCGCCTCCTCAAGA+TGG 0.514627 3_1:+79529206 Msa0378700:CDS
AGTGATAATGTTAGCTCAAG+AGG 0.516301 3_1:+79524710 Msa0378700:CDS
CATAGACTTTAAAACCTTGG+CGG 0.516915 3_1:-79524811 None:intergenic
TGCTAAGGGAAAACGTGACT+GGG 0.517165 3_1:-79530299 None:intergenic
GGTCTTATTGGTGAAGGCAC+TGG 0.517438 3_1:+79524783 Msa0378700:CDS
GGATCTAAGGGCGCAGATCT+CGG 0.519911 3_1:+79529044 Msa0378700:CDS
ACCTGTGTGCGAATATTAGT+AGG 0.519972 3_1:-79525899 None:intergenic
GAAGGTTATAATCCTAGCTA+TGG 0.520470 3_1:+79529990 Msa0378700:CDS
GTGGAGAAGATAATTGGAAG+AGG 0.520750 3_1:+79524864 Msa0378700:CDS
ATTGATTTGATTGATGAAGC+TGG 0.522141 3_1:+79528277 Msa0378700:CDS
CATATCGTGTCCTCCTGGAC+GGG 0.524485 3_1:+79529153 Msa0378700:CDS
GTTACTGCTACTGTTGGCTC+GGG 0.524509 3_1:+79526056 Msa0378700:CDS
CCACAACATTGGATGAATAC+AGG 0.528109 3_1:+79527366 Msa0378700:CDS
CAATAAAACACCAACTTTGG+AGG 0.528552 3_1:+79526088 Msa0378700:CDS
ATCTCGGCACTTGTAGAGAA+AGG 0.528902 3_1:+79529060 Msa0378700:CDS
AAAGGCCTGGCTCCATAGCT+AGG 0.530755 3_1:-79530002 None:intergenic
TCGCAACCAAGACTTTGAAA+AGG 0.532814 3_1:+79528508 Msa0378700:CDS
TCGGGCTATCCGTCGAGCAC+GGG 0.533907 3_1:+79529284 Msa0378700:CDS
AATTTCTACACGGCGGGCAA+GGG 0.534704 3_1:+79524632 Msa0378700:CDS
GCAAAGTCAACATAAGGGAT+CGG 0.534948 3_1:+79524464 Msa0378700:CDS
ACAAGTGGATTAAGAATGCC+AGG 0.535409 3_1:+79524528 Msa0378700:CDS
TATATGATATAATATGATAG+AGG 0.535447 3_1:-79523627 None:intergenic
ATGCTTCAGATCCTTGAAGA+TGG 0.536989 3_1:+79529609 Msa0378700:CDS
ATCAACAGGAATGCCCGTCC+AGG 0.537924 3_1:-79529166 None:intergenic
GGGAAAGTTGGATCCTGTTG+TGG 0.537999 3_1:+79526234 Msa0378700:intron
CTTATTGGAGAACCTGGTGT+TGG 0.538020 3_1:+79526322 Msa0378700:CDS
GCATACATACATCATAGAAA+AGG 0.538074 3_1:-79530205 None:intergenic
TCGACGGATAGCCCGACTAA+TGG 0.538900 3_1:-79529277 None:intergenic
GTAAAGTATCTTCCATCTTG+AGG 0.539384 3_1:-79529218 None:intergenic
AATGGCAATTTCTACACGGC+GGG 0.539827 3_1:+79524626 Msa0378700:CDS
GTATACTTATTCCATAAACT+AGG 0.542797 3_1:-79530679 None:intergenic
GACAATGTTACTGCTACTGT+TGG 0.543582 3_1:+79526050 Msa0378700:CDS
TTCTTCAGAGCCAAAGTAGT+AGG 0.543624 3_1:-79529400 None:intergenic
ACACAAGCGAGTCATTGGTC+AGG 0.544730 3_1:+79529239 Msa0378700:CDS
GGAAAGTTGGATCCTGTTGT+GGG 0.544780 3_1:+79526235 Msa0378700:CDS
GATATTCGGGAATCATGGCT+CGG 0.544931 3_1:+79524394 Msa0378700:exon
AAGCGAAAGGAATAAAATTG+TGG 0.545174 3_1:-79523592 None:intergenic
GACATGGGTCTGCTTGTAGC+CGG 0.545246 3_1:+79526805 Msa0378700:CDS
TGATAAAGAAATGGATCTAA+GGG 0.546297 3_1:+79529032 Msa0378700:CDS
GGAAGCAGTGTGATTGAGAA+AGG 0.546826 3_1:+79529702 Msa0378700:CDS
GACATGTTCATCTTCATCCA+TGG 0.547277 3_1:+79530437 Msa0378700:three_prime_UTR
TGGTGTGGGGAAGTCTGAAT+TGG 0.547498 3_1:+79529362 Msa0378700:CDS
TTTGACCAAGCTCGCAGAAG+AGG 0.548018 3_1:+79526124 Msa0378700:CDS
TGGGTGACACGTTCAATTTG+TGG 0.548358 3_1:-79526265 None:intergenic
GATGAGCAAAGCAGAGAGTG+AGG 0.551014 3_1:+79529089 Msa0378700:CDS
GGAGAGGTTGAAGAAACTGA+TGG 0.552688 3_1:+79526852 Msa0378700:CDS
ATAATCCTAGCTATGGAGCC+AGG 0.554444 3_1:+79529997 Msa0378700:CDS
CTTCTAGGTCTTCTTCGAGA+GGG 0.556040 3_1:+79525833 Msa0378700:CDS
CTCCGTGAAACGCTCAAACA+TGG 0.556050 3_1:-79524676 None:intergenic
TGTATGGTTTCATCAACAGT+TGG 0.556173 3_1:-79527449 None:intergenic
GGTAATGTGATTGTTCTCAA+TGG 0.559015 3_1:+79530128 Msa0378700:CDS
ACATATCGTGTCCTCCTGGA+CGG 0.559052 3_1:+79529152 Msa0378700:CDS
ATATTCGGGAATCATGGCTC+GGG 0.559088 3_1:+79524395 Msa0378700:exon
GTATGACAACCACAAATTCA+GGG 0.559140 3_1:+79530581 Msa0378700:three_prime_UTR
TCAGTGTAACCAACATATCC+AGG 0.559254 3_1:-79529492 None:intergenic
AGCAGTAGAAGCCATTAGTC+GGG 0.561845 3_1:+79529266 Msa0378700:CDS
AAACGCTCAAACATGGCTCT+AGG 0.562302 3_1:-79524669 None:intergenic
GCTATCCGTCGAGCACGGGT+TGG 0.562819 3_1:+79529288 Msa0378700:CDS
TTAACAAATGCATACCAAGT+TGG 0.563326 3_1:-79524965 None:intergenic
TGATATAATATGATAGAGGA+AGG 0.565620 3_1:-79523623 None:intergenic
TTGATTTGCTAGGCTGCTAA+GGG 0.565979 3_1:-79530313 None:intergenic
TTTCTGGTCCAACTGGTGTG+GGG 0.566734 3_1:+79529349 Msa0378700:CDS
CTACTGGGTCTTATTGGTGA+AGG 0.566897 3_1:+79524777 Msa0378700:CDS
ATGTTGTCCCGCAATGTACA+GGG 0.567184 3_1:+79530622 Msa0378700:three_prime_UTR
CACAAGCAAAGTCAACATAA+GGG 0.569649 3_1:+79524459 Msa0378700:CDS
AAGCAGTAGAAGCCATTAGT+CGG 0.571735 3_1:+79529265 Msa0378700:CDS
TTGGATACTATGCTGAAACC+TGG 0.572166 3_1:+79524579 Msa0378700:CDS
GCTTCTAGGTCTTCTTCGAG+AGG 0.573108 3_1:+79525832 Msa0378700:CDS
GTGCACACACTAATTGGAGC+AGG 0.573347 3_1:+79526919 Msa0378700:CDS
ATCCTCCAAAAGTCGCATGA+TGG 0.573693 3_1:-79530033 None:intergenic
CAATACTATACAGCAATGCT+GGG 0.574156 3_1:-79530517 None:intergenic
TCAATCCAACCCGTGCTCGA+CGG 0.575359 3_1:-79529293 None:intergenic
GTGGTTTCAGTTGCCAGAAG+AGG 0.575911 3_1:+79528430 Msa0378700:intron
ATTGCTGTCTTCCCAACACC+AGG 0.576240 3_1:-79526334 None:intergenic
GGAACAGAGCAGATTCTACT+GGG 0.576295 3_1:+79524762 Msa0378700:CDS
GAAGGAAGGAAAGAAGCGAA+AGG 0.576676 3_1:-79523605 None:intergenic
GATTAATGTTCCTGGTCTAG+TGG 0.577290 3_1:+79524431 Msa0378700:CDS
CTCACCACGGTATTTAGTAC+CGG 0.577721 3_1:-79526824 None:intergenic
TGGATACTATGCTGAAACCT+GGG 0.580597 3_1:+79524580 Msa0378700:CDS
GGTCTTCTTCGAGAGGGTGA+GGG 0.581676 3_1:+79525839 Msa0378700:CDS
GGAATCGTCTCTCCAAAGCT+GGG 0.583453 3_1:-79527406 None:intergenic
ATTGCTGTATAGTATTGCTA+TGG 0.587333 3_1:+79530523 Msa0378700:three_prime_UTR
ATGTGTGCTTTGCGAACAAG+TGG 0.589134 3_1:+79524513 Msa0378700:CDS
CATGTTGAATACATCAGGAT+GGG 0.591274 3_1:-79529586 None:intergenic
TTTGCGTGAAAATCTAGCCC+AGG 0.591359 3_1:-79524597 None:intergenic
CCTGTATTCATCCAATGTTG+TGG 0.592061 3_1:-79527366 None:intergenic
TAATGACTCTTGAGTACCGC+TGG 0.592462 3_1:-79530153 None:intergenic
GAGAGTGAGGCAGCAGACGA+AGG 0.592704 3_1:+79529102 Msa0378700:CDS
TCAGACTTCCCCACACCAGT+TGG 0.593013 3_1:-79529357 None:intergenic
TCCAACTTCCGAAATAGCCA+TGG 0.593814 3_1:-79530454 None:intergenic
ACTCACAAAACTGGAGGTGA+AGG 0.595629 3_1:+79529869 Msa0378700:CDS
GGAAGACTAACGGACAGTAA+AGG 0.596129 3_1:+79529630 Msa0378700:CDS
CTAAAACCAGCTCTTGCAAG+AGG 0.596964 3_1:+79526976 Msa0378700:CDS
TCATGTTGAATACATCAGGA+TGG 0.597747 3_1:-79529587 None:intergenic
CTAGGTTATAACCCTCGACA+TGG 0.599033 3_1:+79526789 Msa0378700:intron
GCATAGGTTATTCGCATGGT+GGG 0.603210 3_1:+79526017 Msa0378700:intron
TTAACATTATAGGAATAAGT+GGG 0.603681 3_1:+79530351 Msa0378700:three_prime_UTR
TGTTAGCTCAAGAGGAGGCA+AGG 0.606725 3_1:+79524718 Msa0378700:CDS
TCCAATACACGCTTTGCACG+AGG 0.610074 3_1:-79524921 None:intergenic
GCCCGTGTTCTTGAAAACCT+GGG 0.611740 3_1:+79525869 Msa0378700:CDS
TTGTGCCCAACCACTAGACC+AGG 0.614357 3_1:-79524441 None:intergenic
AGTCCGTCTTCAACATGCAC+AGG 0.614688 3_1:+79528306 Msa0378700:CDS
GAGGCTCTTGCTATATAATG+TGG 0.617034 3_1:+79530179 Msa0378700:exon
CAACCTTAAAGATGCACGAG+TGG 0.617077 3_1:+79524839 Msa0378700:CDS
AATCAAGAGTTTGGTGACTG+AGG 0.617951 3_1:+79529782 Msa0378700:CDS
ATACCTGTGCATGTTGAAGA+CGG 0.618584 3_1:-79528309 None:intergenic
TACAAGCAGACCCATGTCGA+GGG 0.618958 3_1:-79526800 None:intergenic
AGATGAAGCTAGCAATTGGA+CGG 0.619132 3_1:-79529326 None:intergenic
GTACGAAGTCCTGAGAAACC+TGG 0.621017 3_1:-79524546 None:intergenic
GGGAAGACAGCAATTGCTGA+AGG 0.622127 3_1:+79526343 Msa0378700:CDS
GAAACCATACAAATACTGAA+AGG 0.623251 3_1:+79527461 Msa0378700:CDS
GGATATGTTGGTTACACTGA+AGG 0.624514 3_1:+79529495 Msa0378700:CDS
CCTTGAAGATGGAAGACTAA+CGG 0.625200 3_1:+79529620 Msa0378700:CDS
AGGGACAGGGTGGTTGACGA+AGG 0.629060 3_1:+79529972 Msa0378700:CDS
AGGCACTGGTATCGCCGCCA+AGG 0.629421 3_1:+79524797 Msa0378700:CDS
AGGAGTAAACGGAATTTCAA+CGG 0.631678 3_1:-79524901 None:intergenic
CCAGGTTCTCCAATAAGACA+AGG 0.631883 3_1:-79526316 None:intergenic
CAGGCAACTCACAAAACTGG+AGG 0.631958 3_1:+79529863 Msa0378700:CDS
CGAAAGGAATAAAATTGTGG+TGG 0.633504 3_1:-79523589 None:intergenic
CTCGCCAGAGAGATCAAAGA+GGG 0.633919 3_1:+79530074 Msa0378700:CDS
AATAGCAGACATAATGCTCA+GGG 0.636079 3_1:+79529893 Msa0378700:CDS
AACAGAAAGATTTAGGGACA+GGG 0.637304 3_1:+79529959 Msa0378700:CDS
TGTATTGGAACTTTCACTCG+AGG 0.638433 3_1:+79524935 Msa0378700:CDS
GGCATAGGTTATTCGCATGG+TGG 0.639012 3_1:+79526016 Msa0378700:intron
CATCAGTATATCGAAGCTTG+TGG 0.642564 3_1:-79527508 None:intergenic
ACATGCAACCCTGTACATTG+CGG 0.645630 3_1:-79530630 None:intergenic
CTACAAGCAGACCCATGTCG+AGG 0.645704 3_1:-79526801 None:intergenic
ACCGTGGTGAGTTTGAGGAG+AGG 0.647205 3_1:+79526836 Msa0378700:CDS
ATGGGCATAGGTTATTCGCA+TGG 0.648542 3_1:+79526013 Msa0378700:intron
TTGCTGAAGGTCTTGCTCAG+CGG 0.650332 3_1:+79526356 Msa0378700:CDS
ATTGGAGCAGGAGCAGCCGA+AGG 0.651442 3_1:+79526931 Msa0378700:CDS
GATGAAGATGAACATGTCCA+AGG 0.652848 3_1:-79530432 None:intergenic
TATCAGCAAGCACCTCCTTG+AGG 0.653823 3_1:+79523676 Msa0378700:five_prime_UTR
AGAGGCAAAAGAACTTGACA+AGG 0.654303 3_1:+79528448 Msa0378700:CDS
GAGAACAATCACATTACCGT+CGG 0.654311 3_1:-79530123 None:intergenic
TACTCAAGAGTCATTACCAG+AGG 0.656366 3_1:+79530160 Msa0378700:CDS
ACATGAGTGAGTTTATGGAA+AGG 0.657196 3_1:+79529439 Msa0378700:CDS
ACCTCTCCTCAAACTCACCA+CGG 0.657923 3_1:-79526837 None:intergenic
GTGTATTGGAGCCACAACAT+TGG 0.658810 3_1:+79527355 Msa0378700:intron
AACAGGAATGCCCGTCCAGG+AGG 0.663322 3_1:-79529163 None:intergenic
AAGTATCTTCCATCTTGAGG+AGG 0.666939 3_1:-79529215 None:intergenic
GATAATGTTAGCTCAAGAGG+AGG 0.667530 3_1:+79524713 Msa0378700:CDS
GGCAAAAGAACTTGACAAGG+AGG 0.667719 3_1:+79528451 Msa0378700:CDS
TCCTACTAATATTCGCACAC+AGG 0.671963 3_1:+79525898 Msa0378700:CDS
GGACAGTAAAGGCCGAACTG+TGG 0.672843 3_1:+79529641 Msa0378700:CDS
TGATGTACCTGAAACAATCG+AGG 0.674849 3_1:+79526390 Msa0378700:CDS
TAGGTTATAACCCTCGACAT+GGG 0.677434 3_1:+79526790 Msa0378700:intron
GCTCGCCAGAGAGATCAAAG+AGG 0.680368 3_1:+79530073 Msa0378700:CDS
AGAAAGATTTAGGGACAGGG+TGG 0.680970 3_1:+79529962 Msa0378700:CDS
GGCACTTGTAGAGAAAGGCA+AGG 0.681351 3_1:+79529065 Msa0378700:CDS
ATTGTTCTCAATGGTACCAG+CGG 0.682456 3_1:+79530137 Msa0378700:CDS
AGCAGTGTGATTGAGAAAGG+AGG 0.683862 3_1:+79529705 Msa0378700:CDS
TATCAATGGCAATTTCTACA+CGG 0.687547 3_1:+79524622 Msa0378700:CDS
ATAGTGGATGTTGATTCCGA+CGG 0.707457 3_1:+79530107 Msa0378700:CDS
GATGTACCTGAAACAATCGA+GGG 0.717844 3_1:+79526391 Msa0378700:CDS
AGCAGACATAATGCTCAGGG+AGG 0.724565 3_1:+79529896 Msa0378700:CDS
CAATGGCAATTTCTACACGG+CGG 0.726789 3_1:+79524625 Msa0378700:CDS
TATGTTGGTTACACTGAAGG+TGG 0.729330 3_1:+79529498 Msa0378700:CDS
GTAGCCGGTACTAAATACCG+TGG 0.745190 3_1:+79526820 Msa0378700:CDS
GTGTAACCAACATATCCAGG+AGG 0.759460 3_1:-79529489 None:intergenic
TAGTAATAGATACCTCAAGG+AGG 0.774995 3_1:-79523688 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATTTCTTATAAAA+AGG + chr3_1:79525621-79525640 Msa0378700:intron 10.0%
!! AATTAATATAAACATTAATG+TGG - chr3_1:79525955-79525974 None:intergenic 10.0%
!!! TAATTCTTATTAATTTGATA+TGG - chr3_1:79527197-79527216 None:intergenic 10.0%
!!! AGTTTTTTATTTTTTTAAAC+AGG + chr3_1:79528357-79528376 Msa0378700:intron 10.0%
!! TATATGATATAATATGATAG+AGG - chr3_1:79523630-79523649 None:intergenic 15.0%
!! GTTTAATCAATTATAAGATA+AGG - chr3_1:79523969-79523988 None:intergenic 15.0%
!! CCTAAATTAATTAAGATTTA+AGG - chr3_1:79524029-79524048 None:intergenic 15.0%
!! CCTTAAATCTTAATTAATTT+AGG + chr3_1:79524026-79524045 Msa0378700:intron 15.0%
!!! TTTTTGTTCTTATTTTTGAT+TGG + chr3_1:79525055-79525074 Msa0378700:intron 15.0%
!! ATAAATCTCACAATAAAATA+CGG - chr3_1:79525492-79525511 None:intergenic 15.0%
!!! TTATTTCTTATAAAAAGGAA+CGG + chr3_1:79525626-79525645 Msa0378700:intron 15.0%
!!! AGCATTTTATAAGAATATAT+TGG - chr3_1:79526756-79526775 None:intergenic 15.0%
!! CATAAGTATCAAATTAATAT+TGG + chr3_1:79527228-79527247 Msa0378700:intron 15.0%
!! TAATTTAAAAATTAAAGTGG+TGG + chr3_1:79527258-79527277 Msa0378700:intron 15.0%
!! ACTAAAGTCATATAAATATA+TGG + chr3_1:79528122-79528141 Msa0378700:intron 15.0%
!! ATATAAATATATGGATTTCT+GGG + chr3_1:79528131-79528150 Msa0378700:intron 15.0%
!!! CTTATCTGTTTTTTTTTCTT+TGG + chr3_1:79523761-79523780 Msa0378700:intron 20.0%
!! TTTAGATGAAAGAATGATTA+AGG + chr3_1:79523884-79523903 Msa0378700:intron 20.0%
!!! TTGATTAAACGAATGTTTTA+AGG + chr3_1:79523979-79523998 Msa0378700:intron 20.0%
!!! TGATTAAACGAATGTTTTAA+GGG + chr3_1:79523980-79523999 Msa0378700:intron 20.0%
!!! GTTTTATTAATAAATACAGC+CGG + chr3_1:79524372-79524391 Msa0378700:intron 20.0%
!!! AAATTTATCTATTTTACGTG+AGG + chr3_1:79525169-79525188 Msa0378700:intron 20.0%
!!! TATGTTTTGATTTCATTAAG+AGG + chr3_1:79525207-79525226 Msa0378700:intron 20.0%
!! TAAATCTCACAATAAAATAC+GGG - chr3_1:79525491-79525510 None:intergenic 20.0%
!!! TGATTATTACATGTTATTTG+TGG + chr3_1:79525546-79525565 Msa0378700:intron 20.0%
!! TTGTATTAAAAAAATTGAGC+CGG + chr3_1:79525671-79525690 Msa0378700:intron 20.0%
!!! TCATATTCAATTGTAAGTTT+TGG + chr3_1:79525742-79525761 Msa0378700:intron 20.0%
!! TGGTAAAAATAGATAAATGA+AGG - chr3_1:79525935-79525954 None:intergenic 20.0%
!!! AATAAGACAAGGATTATTTT+TGG - chr3_1:79526308-79526327 None:intergenic 20.0%
!! AAAAATAATCCTTGTCTTAT+TGG + chr3_1:79526307-79526326 Msa0378700:CDS 20.0%
!! TATTAGAAAAATGATGTTGT+CGG + chr3_1:79526618-79526637 Msa0378700:intron 20.0%
!!! CAAATAACAATTTAAGCTTT+TGG - chr3_1:79526702-79526721 None:intergenic 20.0%
!!! AAGCTTAAATTGTTATTTGA+AGG + chr3_1:79526703-79526722 Msa0378700:intron 20.0%
!!! TTTCCTCAAAGTATTTAAAA+TGG + chr3_1:79527016-79527035 Msa0378700:intron 20.0%
!!! AATCCATTTTAAATACTTTG+AGG - chr3_1:79527022-79527041 None:intergenic 20.0%
!! TTAAATATTATGCAGTGTAT+TGG + chr3_1:79527341-79527360 Msa0378700:intron 20.0%
!!! AAATACAGATACTCTAAAAT+TGG + chr3_1:79527757-79527776 Msa0378700:intron 20.0%
!! TTGAATATATTGTATTAACG+AGG + chr3_1:79527990-79528009 Msa0378700:intron 20.0%
!! TGTTTCATGTTAATGTATTT+AGG + chr3_1:79528053-79528072 Msa0378700:intron 20.0%
!! CATATAAATATATGGATTTC+TGG + chr3_1:79528130-79528149 Msa0378700:intron 20.0%
!! TATAAATATATGGATTTCTG+GGG + chr3_1:79528132-79528151 Msa0378700:intron 20.0%
!! ATAAAAAACTGCTAGTTAAA+GGG - chr3_1:79528347-79528366 None:intergenic 20.0%
!! AATAAAAAACTGCTAGTTAA+AGG - chr3_1:79528348-79528367 None:intergenic 20.0%
!! ATTGAACTATAAAACTTTAC+AGG - chr3_1:79528558-79528577 None:intergenic 20.0%
!! TTATAATAGAATCAAGAGTT+TGG + chr3_1:79529773-79529792 Msa0378700:CDS 20.0%
!!! TCTTTTAATTTATCACTGAT+AGG + chr3_1:79530276-79530295 Msa0378700:three_prime_UTR 20.0%
!! TTAACATTATAGGAATAAGT+GGG + chr3_1:79530351-79530370 Msa0378700:three_prime_UTR 20.0%
! TGATATAATATGATAGAGGA+AGG - chr3_1:79523626-79523645 None:intergenic 25.0%
! ATATAGTAATAGATACCTCA+AGG - chr3_1:79523694-79523713 None:intergenic 25.0%
!!! ATCTGTTTTTTTTTCTTTGG+TGG + chr3_1:79523764-79523783 Msa0378700:intron 25.0%
!!! GATTAAACGAATGTTTTAAG+GGG + chr3_1:79523981-79524000 Msa0378700:intron 25.0%
!! CTTTGTTTGTTAAACTATGT+AGG + chr3_1:79524128-79524147 Msa0378700:intron 25.0%
! TATGTATTCTATTGCTTCAA+GGG + chr3_1:79524329-79524348 Msa0378700:intron 25.0%
! AATTGGGTAGTAATGTATAA+TGG - chr3_1:79524998-79525017 None:intergenic 25.0%
! TTACTACCCAATTTATTAGT+TGG + chr3_1:79525005-79525024 Msa0378700:intron 25.0%
! CTTTCTCCAACTAATAAATT+GGG - chr3_1:79525014-79525033 None:intergenic 25.0%
! TAATTCAAGCAACAAATTAC+AGG - chr3_1:79525116-79525135 None:intergenic 25.0%
! AAAGGAATTCTAGCAATTAA+TGG - chr3_1:79525464-79525483 None:intergenic 25.0%
! CAATAAAATACGGGTATAAA+AGG - chr3_1:79525482-79525501 None:intergenic 25.0%
! TCTTACACCATAAAAATTTC+AGG + chr3_1:79525782-79525801 Msa0378700:intron 25.0%
! CTTACACCATAAAAATTTCA+GGG + chr3_1:79525783-79525802 Msa0378700:intron 25.0%
! CATTAATCTGATCATTTCTT+TGG + chr3_1:79525989-79526008 Msa0378700:intron 25.0%
! TAACAATAAAACACCAACTT+TGG + chr3_1:79526085-79526104 Msa0378700:CDS 25.0%
! ATATTCTATATTTGAGTAGC+TGG + chr3_1:79526512-79526531 Msa0378700:intron 25.0%
!!! TATGATTGGTTTTTAGTTGT+TGG + chr3_1:79527095-79527114 Msa0378700:intron 25.0%
!! ACAAGTACATCAATTTTCAA+TGG - chr3_1:79527676-79527695 None:intergenic 25.0%
! TGAAAATTGATGTACTTGTT+TGG + chr3_1:79527677-79527696 Msa0378700:intron 25.0%
! TATATTGTATTAACGAGGAA+TGG + chr3_1:79527995-79528014 Msa0378700:intron 25.0%
! CACAATTAGCTAAATAATAG+AGG - chr3_1:79528403-79528422 None:intergenic 25.0%
!! TAATTTTTATACACTCTCAG+TGG - chr3_1:79528724-79528743 None:intergenic 25.0%
! AATGTTTGATGCTAAAACAT+AGG - chr3_1:79528750-79528769 None:intergenic 25.0%
!! TTTTAGCATCAAACATTTTC+AGG + chr3_1:79528753-79528772 Msa0378700:intron 25.0%
! AACATTATCTAATTGGAGAA+AGG - chr3_1:79528793-79528812 None:intergenic 25.0%
! AGACAACAACATTATCTAAT+TGG - chr3_1:79528800-79528819 None:intergenic 25.0%
! ATGAAAAATAATACTTGTGC+TGG + chr3_1:79528820-79528839 Msa0378700:intron 25.0%
!! ATTGCCTGAAATTTTATAGT+TGG + chr3_1:79528859-79528878 Msa0378700:intron 25.0%
! ATTGAGTTCAAAAAACACTT+TGG + chr3_1:79528908-79528927 Msa0378700:intron 25.0%
!! TTAGTCAATAATTTGTGACT+TGG + chr3_1:79528973-79528992 Msa0378700:intron 25.0%
! TGATAAAGAAATGGATCTAA+GGG + chr3_1:79529032-79529051 Msa0378700:CDS 25.0%
! TTCAAGTAACAGAAAGATTT+AGG + chr3_1:79529952-79529971 Msa0378700:CDS 25.0%
! TCAAGTAACAGAAAGATTTA+GGG + chr3_1:79529953-79529972 Msa0378700:CDS 25.0%
! GTTAACATTATAGGAATAAG+TGG + chr3_1:79530350-79530369 Msa0378700:three_prime_UTR 25.0%
! GTATACTTATTCCATAAACT+AGG - chr3_1:79530682-79530701 None:intergenic 25.0%
TAAACAGTATGATGCTCTAT+TGG - chr3_1:79523492-79523511 None:intergenic 30.0%
AATAAAATTGTGGTGGCAAA+TGG - chr3_1:79523585-79523604 None:intergenic 30.0%
AAGCGAAAGGAATAAAATTG+TGG - chr3_1:79523595-79523614 None:intergenic 30.0%
ATAATATGATAGAGGAAGGA+AGG - chr3_1:79523622-79523641 None:intergenic 30.0%
TAAACTTCTATATAGCTGCT+TGG + chr3_1:79524069-79524088 Msa0378700:intron 30.0%
AAACTTCTATATAGCTGCTT+GGG + chr3_1:79524070-79524089 Msa0378700:intron 30.0%
GTAAACGAATAATTAGCAGA+TGG - chr3_1:79524206-79524225 None:intergenic 30.0%
CTGCTAATTATTCGTTTACA+TGG + chr3_1:79524207-79524226 Msa0378700:intron 30.0%
ATTTCCTGAAATCATGAACA+TGG + chr3_1:79524256-79524275 Msa0378700:intron 30.0%
GTATGTATTCTATTGCTTCA+AGG + chr3_1:79524328-79524347 Msa0378700:intron 30.0%
GCTTCAAGGGTAATAATTAT+TGG + chr3_1:79524342-79524361 Msa0378700:intron 30.0%
AATAAATACAGCCGGATATT+CGG + chr3_1:79524380-79524399 Msa0378700:intron 30.0%
ACTTCGTACTATCAATCATT+TGG + chr3_1:79524560-79524579 Msa0378700:CDS 30.0%
TATCAATGGCAATTTCTACA+CGG + chr3_1:79524622-79524641 Msa0378700:CDS 30.0%
TTAACAAATGCATACCAAGT+TGG - chr3_1:79524968-79524987 None:intergenic 30.0%
GCTTTCTCCAACTAATAAAT+TGG - chr3_1:79525015-79525034 None:intergenic 30.0%
!! AGCATTTTGATCTTTAACAG+TGG + chr3_1:79525032-79525051 Msa0378700:intron 30.0%
AATTACAGGACAAAAAACTG+CGG - chr3_1:79525102-79525121 None:intergenic 30.0%
! TGTTGCTTGAATTAAGATAG+AGG + chr3_1:79525122-79525141 Msa0378700:intron 30.0%
!!! GAATTAAGATAGAGGTGTTT+TGG + chr3_1:79525130-79525149 Msa0378700:intron 30.0%
!!! GTTTTGATTTCATTAAGAGG+AGG + chr3_1:79525210-79525229 Msa0378700:intron 30.0%
GGGATAAACAAACTATCATA+TGG - chr3_1:79525321-79525340 None:intergenic 30.0%
CCAAATAGATAGTACTCTTT+CGG + chr3_1:79525396-79525415 Msa0378700:intron 30.0%
CAAATAGATAGTACTCTTTC+GGG + chr3_1:79525397-79525416 Msa0378700:intron 30.0%
CTGTGTTTCTTATCGTTATT+AGG - chr3_1:79525433-79525452 None:intergenic 30.0%
!! ATTCTAGCAATTAATGGACT+TGG - chr3_1:79525458-79525477 None:intergenic 30.0%
ATTAAATGCATCCACTATGT+GGG - chr3_1:79525527-79525546 None:intergenic 30.0%
!! GACAAAGGAAAAGCATTTAA+AGG - chr3_1:79525590-79525609 None:intergenic 30.0%
! TTTCCTTTGTCTTGATGATT+TGG + chr3_1:79525599-79525618 Msa0378700:intron 30.0%
AAACCAAATCATCAAGACAA+AGG - chr3_1:79525605-79525624 None:intergenic 30.0%
TATTAAAAAAATTGAGCCGG+AGG + chr3_1:79525674-79525693 Msa0378700:intron 30.0%
! ATTGTGCCCTGAAATTTTTA+TGG - chr3_1:79525792-79525811 None:intergenic 30.0%
ATTTCAGGGCACAATTATAT+TGG + chr3_1:79525797-79525816 Msa0378700:intron 30.0%
! ATCTGATCATTTCTTTGGAA+TGG + chr3_1:79525994-79526013 Msa0378700:intron 30.0%
!! TCTGATCATTTCTTTGGAAT+GGG + chr3_1:79525995-79526014 Msa0378700:intron 30.0%
AGAATAACAGATCATCTGAA+TGG - chr3_1:79526472-79526491 None:intergenic 30.0%
! TGGAAGAGTTGATTATATCA+TGG - chr3_1:79526682-79526701 None:intergenic 30.0%
CATATAAACTTTATGACCAG+AGG - chr3_1:79527168-79527187 None:intergenic 30.0%
GAAACCATACAAATACTGAA+AGG + chr3_1:79527461-79527480 Msa0378700:CDS 30.0%
AAGTCCTTTCAGTATTTGTA+TGG - chr3_1:79527468-79527487 None:intergenic 30.0%
AACTTTCATACCAGTATATC+AGG + chr3_1:79527552-79527571 Msa0378700:CDS 30.0%
TAATGTCAAGATATTCACAG+AGG - chr3_1:79527721-79527740 None:intergenic 30.0%
!! TTAGTACTGGCATTTACATT+CGG + chr3_1:79527812-79527831 Msa0378700:intron 30.0%
TCAAGTTATCGTAGTTTAGA+TGG - chr3_1:79527873-79527892 None:intergenic 30.0%
AAACTATGTAGCAATATCTC+TGG + chr3_1:79527919-79527938 Msa0378700:intron 30.0%
CTTTAGTACAGTATGCATAT+GGG - chr3_1:79528109-79528128 None:intergenic 30.0%
ACTTTAGTACAGTATGCATA+TGG - chr3_1:79528110-79528129 None:intergenic 30.0%
GCTCATTTCAAAATTATTCC+TGG + chr3_1:79528203-79528222 Msa0378700:intron 30.0%
!! AATCAAATCAATGGCTTTGT+CGG - chr3_1:79528269-79528288 None:intergenic 30.0%
AGCTTCATCAATCAAATCAA+TGG - chr3_1:79528278-79528297 None:intergenic 30.0%
!! ATTGATTTGATTGATGAAGC+TGG + chr3_1:79528277-79528296 Msa0378700:CDS 30.0%
TAGCTAATTGTGCTATAATG+TGG + chr3_1:79528411-79528430 Msa0378700:intron 30.0%
! AAGTTACCTTTTCAAAGTCT+TGG - chr3_1:79528517-79528536 None:intergenic 30.0%
GTTCAATTTATATACGCTCT+CGG + chr3_1:79528571-79528590 Msa0378700:intron 30.0%
TAGGCCAACTATAAAATTTC+AGG - chr3_1:79528866-79528885 None:intergenic 30.0%
TGACACATGAATTTCTGAAT+AGG + chr3_1:79528996-79529015 Msa0378700:intron 30.0%
AGAACTACGTGATAAAGAAA+TGG + chr3_1:79529023-79529042 Msa0378700:CDS 30.0%
GTGATAAAGAAATGGATCTA+AGG + chr3_1:79529031-79529050 Msa0378700:CDS 30.0%
CTTATAATGACGTCAAATGT+TGG + chr3_1:79529681-79529700 Msa0378700:CDS 30.0%
AATCAAGATCGAATCCAATT+CGG - chr3_1:79529734-79529753 None:intergenic 30.0%
AGGAACTAAAACAATACTTC+AGG + chr3_1:79529802-79529821 Msa0378700:CDS 30.0%
TCCAACCTATTTAAAAACTC+TGG - chr3_1:79529828-79529847 None:intergenic 30.0%
! TGGATGAAATGATTGTTTTC+AGG + chr3_1:79529844-79529863 Msa0378700:CDS 30.0%
GCATACATACATCATAGAAA+AGG - chr3_1:79530208-79530227 None:intergenic 30.0%
TCGACAAGTAAAACATACTA+TGG - chr3_1:79530252-79530271 None:intergenic 30.0%
!!! TTTTCTGAACTTGATTTGCT+AGG - chr3_1:79530326-79530345 None:intergenic 30.0%
AGCAAATCAAGTTCAGAAAA+AGG + chr3_1:79530326-79530345 Msa0378700:three_prime_UTR 30.0%
GCAAATCAAGTTCAGAAAAA+GGG + chr3_1:79530327-79530346 Msa0378700:three_prime_UTR 30.0%
CAAATCAAGTTCAGAAAAAG+GGG + chr3_1:79530328-79530347 Msa0378700:three_prime_UTR 30.0%
GAAAAAGGGGTTAACATTAT+AGG + chr3_1:79530341-79530360 Msa0378700:three_prime_UTR 30.0%
ATTATAGGAATAAGTGGGAT+AGG + chr3_1:79530356-79530375 Msa0378700:three_prime_UTR 30.0%
TTATAGGAATAAGTGGGATA+GGG + chr3_1:79530357-79530376 Msa0378700:three_prime_UTR 30.0%
GAAAACCAAAAAAGATGTGT+GGG + chr3_1:79530380-79530399 Msa0378700:three_prime_UTR 30.0%
ATTGCTGTATAGTATTGCTA+TGG + chr3_1:79530523-79530542 Msa0378700:three_prime_UTR 30.0%
CGAAAGGAATAAAATTGTGG+TGG - chr3_1:79523592-79523611 None:intergenic 35.0%
TAGTAATAGATACCTCAAGG+AGG - chr3_1:79523691-79523710 None:intergenic 35.0%
ATAAATACAGCCGGATATTC+GGG + chr3_1:79524381-79524400 Msa0378700:intron 35.0%
CACAAGCAAAGTCAACATAA+GGG + chr3_1:79524459-79524478 Msa0378700:CDS 35.0%
!!! TTTTCACGCAAAGGTATCAA+TGG + chr3_1:79524608-79524627 Msa0378700:CDS 35.0%
! AGTGATAATGTTAGCTCAAG+AGG + chr3_1:79524710-79524729 Msa0378700:CDS 35.0%
!! CATAGACTTTAAAACCTTGG+CGG - chr3_1:79524814-79524833 None:intergenic 35.0%
!!! GCCAAGGTTTTAAAGTCTAT+GGG + chr3_1:79524813-79524832 Msa0378700:CDS 35.0%
!! TCCCATAGACTTTAAAACCT+TGG - chr3_1:79524817-79524836 None:intergenic 35.0%
AAGATAATTGGAAGAGGTAG+TGG + chr3_1:79524870-79524889 Msa0378700:CDS 35.0%
AGGAGTAAACGGAATTTCAA+CGG - chr3_1:79524904-79524923 None:intergenic 35.0%
TGGGTAGTAATGTATAATGG+AGG - chr3_1:79524995-79525014 None:intergenic 35.0%
ATTACAGGACAAAAAACTGC+GGG - chr3_1:79525101-79525120 None:intergenic 35.0%
!!! TGTTTTGGTTATGCAATGCT+TGG + chr3_1:79525145-79525164 Msa0378700:intron 35.0%
! ATCTATTTTACGTGAGGAGA+TGG + chr3_1:79525175-79525194 Msa0378700:intron 35.0%
! TCTATTTTACGTGAGGAGAT+GGG + chr3_1:79525176-79525195 Msa0378700:intron 35.0%
TATTCTCTACGCTTTCACTT+AGG - chr3_1:79525240-79525259 None:intergenic 35.0%
! TCACTTGGATAGAAGTACAA+GGG - chr3_1:79525341-79525360 None:intergenic 35.0%
! ATCACTTGGATAGAAGTACA+AGG - chr3_1:79525342-79525361 None:intergenic 35.0%
!! CCGAAAGAGTACTATCTATT+TGG - chr3_1:79525399-79525418 None:intergenic 35.0%
!!! GTACTCTTTCGGGTTTTTTT+AGG + chr3_1:79525407-79525426 Msa0378700:intron 35.0%
CATTAAATGCATCCACTATG+TGG - chr3_1:79525528-79525547 None:intergenic 35.0%
GAAAAAAAACAGATAGCCTC+CGG - chr3_1:79525693-79525712 None:intergenic 35.0%
!!! GGCTATCTGTTTTTTTTCAG+TGG + chr3_1:79525695-79525714 Msa0378700:intron 35.0%
!!! ATCTGTTTTTTTTCAGTGGC+TGG + chr3_1:79525699-79525718 Msa0378700:intron 35.0%
CAATAAAACACCAACTTTGG+AGG + chr3_1:79526088-79526107 Msa0378700:CDS 35.0%
CATCGTTCATGAAGAAAACT+AGG - chr3_1:79526161-79526180 None:intergenic 35.0%
!! CTAGTTTTCTTCATGAACGA+TGG + chr3_1:79526159-79526178 Msa0378700:intron 35.0%
!!! AAGGATTATTTTTGGTGCGA+CGG - chr3_1:79526300-79526319 None:intergenic 35.0%
!!! TTTTTTCCCTCGATTGTTTC+AGG - chr3_1:79526400-79526419 None:intergenic 35.0%
TGAAACAATCGAGGGAAAAA+AGG + chr3_1:79526399-79526418 Msa0378700:CDS 35.0%
TCCTTTATTAAGAGCCCTTT+AGG + chr3_1:79526539-79526558 Msa0378700:intron 35.0%
! ATGCTTTGTTCACATGAACT+AGG + chr3_1:79526771-79526790 Msa0378700:intron 35.0%
AACCAATCATATCATTCTCC+CGG - chr3_1:79527086-79527105 None:intergenic 35.0%
!!! ACCACTTGTGAACTTTTTCA+TGG + chr3_1:79527129-79527148 Msa0378700:intron 35.0%
!!! CCACTTGTGAACTTTTTCAT+GGG + chr3_1:79527130-79527149 Msa0378700:intron 35.0%
!!! GTGAACTTTTTCATGGGAAA+AGG + chr3_1:79527136-79527155 Msa0378700:intron 35.0%
TGTATGGTTTCATCAACAGT+TGG - chr3_1:79527452-79527471 None:intergenic 35.0%
TCATGACAAACCTGATATAC+TGG - chr3_1:79527565-79527584 None:intergenic 35.0%
! ATCTTGCATGTCATTTATGC+TGG + chr3_1:79527608-79527627 Msa0378700:intron 35.0%
!! TAGTACTGGCATTTACATTC+GGG + chr3_1:79527813-79527832 Msa0378700:intron 35.0%
ATGCATGTGTCAAGAGAAAT+TGG - chr3_1:79528021-79528040 None:intergenic 35.0%
AGCAAACATTATTATACGCC+AGG - chr3_1:79528224-79528243 None:intergenic 35.0%
!! ATCAAATCAATGGCTTTGTC+GGG - chr3_1:79528268-79528287 None:intergenic 35.0%
AAACATTGCACGTTTGAATC+AGG - chr3_1:79528954-79528973 None:intergenic 35.0%
ACATGAATTTCTGAATAGGC+TGG + chr3_1:79529000-79529019 Msa0378700:intron 35.0%
ATGTCAACTTCAGTCACAAT+AGG - chr3_1:79529129-79529148 None:intergenic 35.0%
! GTAAAGTATCTTCCATCTTG+AGG - chr3_1:79529221-79529240 None:intergenic 35.0%
GAAAAGATGAAGCTAGCAAT+TGG - chr3_1:79529333-79529352 None:intergenic 35.0%
!! ATTGCTAGCTTCATCTTTTC+TGG + chr3_1:79529333-79529352 Msa0378700:CDS 35.0%
TCTTGACATGAGTGAGTTTA+TGG + chr3_1:79529434-79529453 Msa0378700:CDS 35.0%
ACATGAGTGAGTTTATGGAA+AGG + chr3_1:79529439-79529458 Msa0378700:CDS 35.0%
! TCAAAGAGTACAACAGTGTA+AGG - chr3_1:79529552-79529571 None:intergenic 35.0%
CATGTTGAATACATCAGGAT+GGG - chr3_1:79529589-79529608 None:intergenic 35.0%
TCATGTTGAATACATCAGGA+TGG - chr3_1:79529590-79529609 None:intergenic 35.0%
AGCATCATGTTGAATACATC+AGG - chr3_1:79529594-79529613 None:intergenic 35.0%
TGTTCTTGAAATCCACAGTT+CGG - chr3_1:79529656-79529675 None:intergenic 35.0%
! TCAGGCCAGAGTTTTTAAAT+AGG + chr3_1:79529820-79529839 Msa0378700:CDS 35.0%
! GCCAGAGTTTTTAAATAGGT+TGG + chr3_1:79529824-79529843 Msa0378700:CDS 35.0%
AAATAGCAGACATAATGCTC+AGG + chr3_1:79529892-79529911 Msa0378700:CDS 35.0%
AATAGCAGACATAATGCTCA+GGG + chr3_1:79529893-79529912 Msa0378700:CDS 35.0%
TAACAGAAAGATTTAGGGAC+AGG + chr3_1:79529958-79529977 Msa0378700:CDS 35.0%
AACAGAAAGATTTAGGGACA+GGG + chr3_1:79529959-79529978 Msa0378700:CDS 35.0%
GAAGGTTATAATCCTAGCTA+TGG + chr3_1:79529990-79530009 Msa0378700:CDS 35.0%
GGAATCAACATCCACTATTA+CGG - chr3_1:79530105-79530124 None:intergenic 35.0%
GGTAATGTGATTGTTCTCAA+TGG + chr3_1:79530128-79530147 Msa0378700:CDS 35.0%
TATAGGAATAAGTGGGATAG+GGG + chr3_1:79530358-79530377 Msa0378700:three_prime_UTR 35.0%
GGAAAACCAAAAAAGATGTG+TGG + chr3_1:79530379-79530398 Msa0378700:three_prime_UTR 35.0%
!!! TCATTCCCACACATCTTTTT+TGG - chr3_1:79530388-79530407 None:intergenic 35.0%
ATCTTCATCCATGGCTATTT+CGG + chr3_1:79530446-79530465 Msa0378700:three_prime_UTR 35.0%
CAATACTATACAGCAATGCT+GGG - chr3_1:79530520-79530539 None:intergenic 35.0%
TGTATGACAACCACAAATTC+AGG + chr3_1:79530580-79530599 Msa0378700:three_prime_UTR 35.0%
GTATGACAACCACAAATTCA+GGG + chr3_1:79530581-79530600 Msa0378700:three_prime_UTR 35.0%
CTCAAATTTCCCTGAATTTG+TGG - chr3_1:79530593-79530612 None:intergenic 35.0%
CAGACTGTATTCCTAGTTTA+TGG + chr3_1:79530668-79530687 Msa0378700:three_prime_UTR 35.0%
TGTAGGTACTATGCTGTCTT+TGG + chr3_1:79524145-79524164 Msa0378700:intron 40.0%
AGCACCATGTTCATGATTTC+AGG - chr3_1:79524263-79524282 None:intergenic 40.0%
TGAAATCATGAACATGGTGC+TGG + chr3_1:79524262-79524281 Msa0378700:intron 40.0%
GATTAATGTTCCTGGTCTAG+TGG + chr3_1:79524431-79524450 Msa0378700:CDS 40.0%
GCACAAGCAAAGTCAACATA+AGG + chr3_1:79524458-79524477 Msa0378700:CDS 40.0%
GCAAAGTCAACATAAGGGAT+CGG + chr3_1:79524464-79524483 Msa0378700:CDS 40.0%
CAAAGTCAACATAAGGGATC+GGG + chr3_1:79524465-79524484 Msa0378700:CDS 40.0%
!! ACAAGTGGATTAAGAATGCC+AGG + chr3_1:79524528-79524547 Msa0378700:CDS 40.0%
TTAAGAATGCCAGGTTTCTC+AGG + chr3_1:79524537-79524556 Msa0378700:CDS 40.0%
TTGGATACTATGCTGAAACC+TGG + chr3_1:79524579-79524598 Msa0378700:CDS 40.0%
TGGATACTATGCTGAAACCT+GGG + chr3_1:79524580-79524599 Msa0378700:CDS 40.0%
GATAATGTTAGCTCAAGAGG+AGG + chr3_1:79524713-79524732 Msa0378700:CDS 40.0%
! CGTCTTGGTCACAATTTTGT+TGG + chr3_1:79524741-79524760 Msa0378700:CDS 40.0%
! CAGATTCTACTGGGTCTTAT+TGG + chr3_1:79524771-79524790 Msa0378700:CDS 40.0%
!!! CGCCAAGGTTTTAAAGTCTA+TGG + chr3_1:79524812-79524831 Msa0378700:CDS 40.0%
GTGGAAGTGGAGAAGATAAT+TGG + chr3_1:79524858-79524877 Msa0378700:CDS 40.0%
GTGGAGAAGATAATTGGAAG+AGG + chr3_1:79524864-79524883 Msa0378700:CDS 40.0%
TGTATTGGAACTTTCACTCG+AGG + chr3_1:79524935-79524954 Msa0378700:CDS 40.0%
! CTATTTTACGTGAGGAGATG+GGG + chr3_1:79525177-79525196 Msa0378700:intron 40.0%
GAGTACTATCTATTTGGTCG+TGG - chr3_1:79525393-79525412 None:intergenic 40.0%
CTAACTAGAAACCCACATAG+TGG + chr3_1:79525513-79525532 Msa0378700:intron 40.0%
TCCTACTAATATTCGCACAC+AGG + chr3_1:79525898-79525917 Msa0378700:CDS 40.0%
ACCTGTGTGCGAATATTAGT+AGG - chr3_1:79525902-79525921 None:intergenic 40.0%
!! CATTTCTTTGGAATGGGCAT+AGG + chr3_1:79526001-79526020 Msa0378700:intron 40.0%
GACAATGTTACTGCTACTGT+TGG + chr3_1:79526050-79526069 Msa0378700:CDS 40.0%
! GTTTTCTTCATGAACGATGG+TGG + chr3_1:79526162-79526181 Msa0378700:intron 40.0%
! GAACGTGTCACCCAAATTTT+AGG + chr3_1:79526274-79526293 Msa0378700:CDS 40.0%
TTATTGGAGAACCTGGTGTT+GGG + chr3_1:79526323-79526342 Msa0378700:CDS 40.0%
TGATGTACCTGAAACAATCG+AGG + chr3_1:79526390-79526409 Msa0378700:CDS 40.0%
GATGTACCTGAAACAATCGA+GGG + chr3_1:79526391-79526410 Msa0378700:CDS 40.0%
GCCTAAAGGGCTCTTAATAA+AGG - chr3_1:79526543-79526562 None:intergenic 40.0%
TTATTAAGAGCCCTTTAGGC+TGG + chr3_1:79526543-79526562 Msa0378700:intron 40.0%
TAATGCACTTCCAGCCTAAA+GGG - chr3_1:79526556-79526575 None:intergenic 40.0%
TTAATGCACTTCCAGCCTAA+AGG - chr3_1:79526557-79526576 None:intergenic 40.0%
TAGGTTATAACCCTCGACAT+GGG + chr3_1:79526790-79526809 Msa0378700:intron 40.0%
TAAATACCGTGGTGAGTTTG+AGG + chr3_1:79526831-79526850 Msa0378700:CDS 40.0%
GATGAAGTGCACACACTAAT+TGG + chr3_1:79526913-79526932 Msa0378700:CDS 40.0%
GATATAGGACAATGGCATCA+AGG - chr3_1:79527064-79527083 None:intergenic 40.0%
TGATGCCATTGTCCTATATC+CGG + chr3_1:79527064-79527083 Msa0378700:intron 40.0%
CATATCATTCTCCCGGATAT+AGG - chr3_1:79527079-79527098 None:intergenic 40.0%
ATCCGGGAGAATGATATGAT+TGG + chr3_1:79527081-79527100 Msa0378700:intron 40.0%
CCCATGAAAAAGTTCACAAG+TGG - chr3_1:79527133-79527152 None:intergenic 40.0%
CCTGTATTCATCCAATGTTG+TGG - chr3_1:79527369-79527388 None:intergenic 40.0%
CCACAACATTGGATGAATAC+AGG + chr3_1:79527366-79527385 Msa0378700:CDS 40.0%
!! GTTGGTTCTGGTACTTTAAC+TGG - chr3_1:79527434-79527453 None:intergenic 40.0%
! GTTTCATCAACAGTTGGTTC+TGG - chr3_1:79527446-79527465 None:intergenic 40.0%
CATCAGTATATCGAAGCTTG+TGG - chr3_1:79527511-79527530 None:intergenic 40.0%
GTGTATTGCAGTCTTAGTAC+TGG + chr3_1:79527799-79527818 Msa0378700:intron 40.0%
!! AGTACTGGCATTTACATTCG+GGG + chr3_1:79527814-79527833 Msa0378700:intron 40.0%
GATGGTTAAACTGCTAGATG+AGG - chr3_1:79527855-79527874 None:intergenic 40.0%
ATACCTGTGCATGTTGAAGA+CGG - chr3_1:79528312-79528331 None:intergenic 40.0%
! TCAAGTTCTTTTGCCTCTTC+TGG - chr3_1:79528446-79528465 None:intergenic 40.0%
AGAGGCAAAAGAACTTGACA+AGG + chr3_1:79528448-79528467 Msa0378700:CDS 40.0%
! TCGCAACCAAGACTTTGAAA+AGG + chr3_1:79528508-79528527 Msa0378700:CDS 40.0%
! TGACTTGCCATGCTCATTAA+TGG + chr3_1:79528660-79528679 Msa0378700:intron 40.0%
GTTGACACCATTAATGAGCA+TGG - chr3_1:79528670-79528689 None:intergenic 40.0%
CTAGATGCAGAGATCATTCT+AGG - chr3_1:79528885-79528904 None:intergenic 40.0%
TGAATCAGGAACAGACAACT+GGG - chr3_1:79528940-79528959 None:intergenic 40.0%
TTGAATCAGGAACAGACAAC+TGG - chr3_1:79528941-79528960 None:intergenic 40.0%
TCTGCTGAGACTTTATCAAC+AGG - chr3_1:79529183-79529202 None:intergenic 40.0%
AAGTATCTTCCATCTTGAGG+AGG - chr3_1:79529218-79529237 None:intergenic 40.0%
ACTTTACACAAGCGAGTCAT+TGG + chr3_1:79529234-79529253 Msa0378700:CDS 40.0%
AAGCAGTAGAAGCCATTAGT+CGG + chr3_1:79529265-79529284 Msa0378700:CDS 40.0%
AGATGAAGCTAGCAATTGGA+CGG - chr3_1:79529329-79529348 None:intergenic 40.0%
!! TTCATCTTTTCTGGTCCAAC+TGG + chr3_1:79529342-79529361 Msa0378700:CDS 40.0%
TTCTTCAGAGCCAAAGTAGT+AGG - chr3_1:79529403-79529422 None:intergenic 40.0%
ACTCATGTCAAGACGAATCA+TGG - chr3_1:79529427-79529446 None:intergenic 40.0%
CACACTGTCTCCAAACTTAT+TGG + chr3_1:79529462-79529481 Msa0378700:CDS 40.0%
AGGAGGTGAACCAATAAGTT+TGG - chr3_1:79529475-79529494 None:intergenic 40.0%
!! AAACTTATTGGTTCACCTCC+TGG + chr3_1:79529474-79529493 Msa0378700:CDS 40.0%
TCAGTGTAACCAACATATCC+AGG - chr3_1:79529495-79529514 None:intergenic 40.0%
! GGATATGTTGGTTACACTGA+AGG + chr3_1:79529495-79529514 Msa0378700:CDS 40.0%
! TATGTTGGTTACACTGAAGG+TGG + chr3_1:79529498-79529517 Msa0378700:CDS 40.0%
ATGCTTCAGATCCTTGAAGA+TGG + chr3_1:79529609-79529628 Msa0378700:CDS 40.0%
CCTTGAAGATGGAAGACTAA+CGG + chr3_1:79529620-79529639 Msa0378700:CDS 40.0%
! AATCAAGAGTTTGGTGACTG+AGG + chr3_1:79529782-79529801 Msa0378700:CDS 40.0%
TTTCAGGCAACTCACAAAAC+TGG + chr3_1:79529860-79529879 Msa0378700:CDS 40.0%
!! ATAGTGGATGTTGATTCCGA+CGG + chr3_1:79530107-79530126 Msa0378700:CDS 40.0%
GAGAACAATCACATTACCGT+CGG - chr3_1:79530126-79530145 None:intergenic 40.0%
ATTGTTCTCAATGGTACCAG+CGG + chr3_1:79530137-79530156 Msa0378700:CDS 40.0%
TACTCAAGAGTCATTACCAG+AGG + chr3_1:79530160-79530179 Msa0378700:CDS 40.0%
CATTATATAGCAAGAGCCTC+TGG - chr3_1:79530179-79530198 None:intergenic 40.0%
! GAGGCTCTTGCTATATAATG+TGG + chr3_1:79530179-79530198 Msa0378700:exon 40.0%
!! TTGATTTGCTAGGCTGCTAA+GGG - chr3_1:79530316-79530335 None:intergenic 40.0%
GATCTGTATATGACATGCCT+TGG + chr3_1:79530415-79530434 Msa0378700:three_prime_UTR 40.0%
GATGAAGATGAACATGTCCA+AGG - chr3_1:79530435-79530454 None:intergenic 40.0%
GACATGTTCATCTTCATCCA+TGG + chr3_1:79530437-79530456 Msa0378700:three_prime_UTR 40.0%
GCAATACTATACAGCAATGC+TGG - chr3_1:79530521-79530540 None:intergenic 40.0%
GAAGGAAGGAAAGAAGCGAA+AGG - chr3_1:79523608-79523627 None:intergenic 45.0%
!! TGAACATGGTGCTGGTTATG+AGG + chr3_1:79524270-79524289 Msa0378700:intron 45.0%
AGCCATGATTCCCGAATATC+CGG - chr3_1:79524394-79524413 None:intergenic 45.0%
GATATTCGGGAATCATGGCT+CGG + chr3_1:79524394-79524413 Msa0378700:exon 45.0%
ATATTCGGGAATCATGGCTC+GGG + chr3_1:79524395-79524414 Msa0378700:exon 45.0%
GCTCAGTCGATTAATGTTCC+TGG + chr3_1:79524423-79524442 Msa0378700:CDS 45.0%
AATGTTCCTGGTCTAGTGGT+TGG + chr3_1:79524435-79524454 Msa0378700:CDS 45.0%
ATGTTCCTGGTCTAGTGGTT+GGG + chr3_1:79524436-79524455 Msa0378700:CDS 45.0%
ATGTGTGCTTTGCGAACAAG+TGG + chr3_1:79524513-79524532 Msa0378700:CDS 45.0%
TTTGCGTGAAAATCTAGCCC+AGG - chr3_1:79524600-79524619 None:intergenic 45.0%
!! TGGGCTAGATTTTCACGCAA+AGG + chr3_1:79524599-79524618 Msa0378700:CDS 45.0%
CAATGGCAATTTCTACACGG+CGG + chr3_1:79524625-79524644 Msa0378700:CDS 45.0%
AATGGCAATTTCTACACGGC+GGG + chr3_1:79524626-79524645 Msa0378700:CDS 45.0%
AAACGCTCAAACATGGCTCT+AGG - chr3_1:79524672-79524691 None:intergenic 45.0%
AGCCATGTTTGAGCGTTTCA+CGG + chr3_1:79524674-79524693 Msa0378700:CDS 45.0%
TGGAACAGAGCAGATTCTAC+TGG + chr3_1:79524761-79524780 Msa0378700:CDS 45.0%
GGAACAGAGCAGATTCTACT+GGG + chr3_1:79524762-79524781 Msa0378700:CDS 45.0%
!! CTACTGGGTCTTATTGGTGA+AGG + chr3_1:79524777-79524796 Msa0378700:CDS 45.0%
CAACCTTAAAGATGCACGAG+TGG + chr3_1:79524839-79524858 Msa0378700:CDS 45.0%
CTTCCACTCGTGCATCTTTA+AGG - chr3_1:79524845-79524864 None:intergenic 45.0%
TAAAGATGCACGAGTGGAAG+TGG + chr3_1:79524845-79524864 Msa0378700:CDS 45.0%
ACACCATGTATTACGGGGTT+TGG - chr3_1:79525369-79525388 None:intergenic 45.0%
TCGTGGCACACCATGTATTA+CGG - chr3_1:79525376-79525395 None:intergenic 45.0%
!! TTCAGTGGCTGGTTTGTCTT+AGG + chr3_1:79525710-79525729 Msa0378700:intron 45.0%
!! TCAGTGGCTGGTTTGTCTTA+GGG + chr3_1:79525711-79525730 Msa0378700:intron 45.0%
GGATCAGAACACTTGCTTCT+AGG + chr3_1:79525818-79525837 Msa0378700:CDS 45.0%
CTTCTAGGTCTTCTTCGAGA+GGG + chr3_1:79525833-79525852 Msa0378700:CDS 45.0%
ATGGGCATAGGTTATTCGCA+TGG + chr3_1:79526013-79526032 Msa0378700:intron 45.0%
GCATAGGTTATTCGCATGGT+GGG + chr3_1:79526017-79526036 Msa0378700:intron 45.0%
! TGTTACTGCTACTGTTGGCT+CGG + chr3_1:79526055-79526074 Msa0378700:CDS 45.0%
! ACACCAACTTTGGAGGAGTA+TGG + chr3_1:79526095-79526114 Msa0378700:CDS 45.0%
GTTCCATACTCCTCCAAAGT+TGG - chr3_1:79526101-79526120 None:intergenic 45.0%
TTCTGCGAGCTTGGTCAAAT+TGG - chr3_1:79526123-79526142 None:intergenic 45.0%
!! GAACGATGGTGGATGATACT+AGG + chr3_1:79526173-79526192 Msa0378700:intron 45.0%
GGAAAGTTGGATCCTGTTGT+GGG + chr3_1:79526235-79526254 Msa0378700:CDS 45.0%
TGGGTGACACGTTCAATTTG+TGG - chr3_1:79526268-79526287 None:intergenic 45.0%
CCAGGTTCTCCAATAAGACA+AGG - chr3_1:79526319-79526338 None:intergenic 45.0%
! CCTTGTCTTATTGGAGAACC+TGG + chr3_1:79526316-79526335 Msa0378700:CDS 45.0%
CTTATTGGAGAACCTGGTGT+TGG + chr3_1:79526322-79526341 Msa0378700:CDS 45.0%
GGATCAATGTCCTCACAAGT+TGG + chr3_1:79526639-79526658 Msa0378700:intron 45.0%
! ATGTCCTCACAAGTTGGCAA+AGG + chr3_1:79526645-79526664 Msa0378700:intron 45.0%
CTAGGTTATAACCCTCGACA+TGG + chr3_1:79526789-79526808 Msa0378700:intron 45.0%
CTCACCACGGTATTTAGTAC+CGG - chr3_1:79526827-79526846 None:intergenic 45.0%
GGAGAGGTTGAAGAAACTGA+TGG + chr3_1:79526852-79526871 Msa0378700:CDS 45.0%
AGCAGCATCAATTGCACCTT+CGG - chr3_1:79526950-79526969 None:intergenic 45.0%
CTAAAACCAGCTCTTGCAAG+AGG + chr3_1:79526976-79526995 Msa0378700:CDS 45.0%
GATGCCATTGTCCTATATCC+GGG + chr3_1:79527065-79527084 Msa0378700:intron 45.0%
TTCTCCCGGATATAGGACAA+TGG - chr3_1:79527072-79527091 None:intergenic 45.0%
AAAGTGGTGGCATTTCCTAC+TGG + chr3_1:79527271-79527290 Msa0378700:intron 45.0%
GTGTATTGGAGCCACAACAT+TGG + chr3_1:79527355-79527374 Msa0378700:intron 45.0%
CATCGAAAAAGACCCAGCTT+TGG + chr3_1:79527394-79527413 Msa0378700:CDS 45.0%
GTTCTGGTACTTTAACTGGC+TGG - chr3_1:79527430-79527449 None:intergenic 45.0%
CTGCAATACACACACAACAC+TGG - chr3_1:79527790-79527809 None:intergenic 45.0%
TGGCATTTACATTCGGGGTA+TGG + chr3_1:79527819-79527838 Msa0378700:intron 45.0%
GGCAAAAATCGATCACTGCA+GGG - chr3_1:79528247-79528266 None:intergenic 45.0%
GGCAAAAGAACTTGACAAGG+AGG + chr3_1:79528451-79528470 Msa0378700:CDS 45.0%
AAGAACTTGACAAGGAGGTC+AGG + chr3_1:79528456-79528475 Msa0378700:CDS 45.0%
GAATCAGGAACAGACAACTG+GGG - chr3_1:79528939-79528958 None:intergenic 45.0%
ATCTCGGCACTTGTAGAGAA+AGG + chr3_1:79529060-79529079 Msa0378700:CDS 45.0%
TTCAACATATCGTGTCCTCC+TGG + chr3_1:79529148-79529167 Msa0378700:CDS 45.0%
AGCAGTAGAAGCCATTAGTC+GGG + chr3_1:79529266-79529285 Msa0378700:CDS 45.0%
AGCTAGCAATTGGACGGTTA+GGG - chr3_1:79529323-79529342 None:intergenic 45.0%
AAGCTAGCAATTGGACGGTT+AGG - chr3_1:79529324-79529343 None:intergenic 45.0%
!! TTTTCTGGTCCAACTGGTGT+GGG + chr3_1:79529348-79529367 Msa0378700:CDS 45.0%
GTCTGAATTGGCCAAAGCAT+TGG + chr3_1:79529374-79529393 Msa0378700:CDS 45.0%
GTGTAACCAACATATCCAGG+AGG - chr3_1:79529492-79529511 None:intergenic 45.0%
!! CCGTTAGTCTTCCATCTTCA+AGG - chr3_1:79529623-79529642 None:intergenic 45.0%
! GGAAGACTAACGGACAGTAA+AGG + chr3_1:79529630-79529649 Msa0378700:CDS 45.0%
GGAAGCAGTGTGATTGAGAA+AGG + chr3_1:79529702-79529721 Msa0378700:CDS 45.0%
AGCAGTGTGATTGAGAAAGG+AGG + chr3_1:79529705-79529724 Msa0378700:CDS 45.0%
ACTCACAAAACTGGAGGTGA+AGG + chr3_1:79529869-79529888 Msa0378700:CDS 45.0%
AGAAAGATTTAGGGACAGGG+TGG + chr3_1:79529962-79529981 Msa0378700:CDS 45.0%
ATAATCCTAGCTATGGAGCC+AGG + chr3_1:79529997-79530016 Msa0378700:CDS 45.0%
CGCATGATGGCTCTTCTTAA+AGG - chr3_1:79530023-79530042 None:intergenic 45.0%
! AAGAGCCATCATGCGACTTT+TGG + chr3_1:79530028-79530047 Msa0378700:CDS 45.0%
ATCCTCCAAAAGTCGCATGA+TGG - chr3_1:79530036-79530055 None:intergenic 45.0%
! TAATGACTCTTGAGTACCGC+TGG - chr3_1:79530156-79530175 None:intergenic 45.0%
TGCTAAGGGAAAACGTGACT+GGG - chr3_1:79530302-79530321 None:intergenic 45.0%
!! CTTGATTTGCTAGGCTGCTA+AGG - chr3_1:79530317-79530336 None:intergenic 45.0%
! TCCATGGCTATTTCGGAAGT+TGG + chr3_1:79530453-79530472 Msa0378700:three_prime_UTR 45.0%
TCCAACTTCCGAAATAGCCA+TGG - chr3_1:79530457-79530476 None:intergenic 45.0%
AATGTTGTCCCGCAATGTAC+AGG + chr3_1:79530621-79530640 Msa0378700:three_prime_UTR 45.0%
ATGTTGTCCCGCAATGTACA+GGG + chr3_1:79530622-79530641 Msa0378700:three_prime_UTR 45.0%
ACATGCAACCCTGTACATTG+CGG - chr3_1:79530633-79530652 None:intergenic 45.0%
TGTACAGGGTTGCATGTCTT+AGG + chr3_1:79530636-79530655 Msa0378700:three_prime_UTR 45.0%
!!! TTTTAATTTAAAAATTAAAG+TGG + chr3_1:79527255-79527274 Msa0378700:intron 5.0%
!! CAAGGAGGTGCTTGCTGATA+AGG - chr3_1:79523676-79523695 None:intergenic 50.0%
TATCAGCAAGCACCTCCTTG+AGG + chr3_1:79523676-79523695 Msa0378700:five_prime_UTR 50.0%
AGCCGGATATTCGGGAATCA+TGG + chr3_1:79524389-79524408 Msa0378700:intron 50.0%
GTACGAAGTCCTGAGAAACC+TGG - chr3_1:79524549-79524568 None:intergenic 50.0%
AATTTCTACACGGCGGGCAA+GGG + chr3_1:79524632-79524651 Msa0378700:CDS 50.0%
CTCCGTGAAACGCTCAAACA+TGG - chr3_1:79524679-79524698 None:intergenic 50.0%
TGTTAGCTCAAGAGGAGGCA+AGG + chr3_1:79524718-79524737 Msa0378700:CDS 50.0%
!! GGTCTTATTGGTGAAGGCAC+TGG + chr3_1:79524783-79524802 Msa0378700:CDS 50.0%
CGCTTTGCACGAGGAGTAAA+CGG - chr3_1:79524915-79524934 None:intergenic 50.0%
TCCTCGTGCAAAGCGTGTAT+TGG + chr3_1:79524920-79524939 Msa0378700:CDS 50.0%
TCCAATACACGCTTTGCACG+AGG - chr3_1:79524924-79524943 None:intergenic 50.0%
GCTCCAAACCCCGTAATACA+TGG + chr3_1:79525363-79525382 Msa0378700:intron 50.0%
GTGGCACACCATGTATTACG+GGG - chr3_1:79525374-79525393 None:intergenic 50.0%
CGTGGCACACCATGTATTAC+GGG - chr3_1:79525375-79525394 None:intergenic 50.0%
GCTTCTAGGTCTTCTTCGAG+AGG + chr3_1:79525832-79525851 Msa0378700:CDS 50.0%
AGCCCGTGTTCTTGAAAACC+TGG + chr3_1:79525868-79525887 Msa0378700:CDS 50.0%
GCCCGTGTTCTTGAAAACCT+GGG + chr3_1:79525869-79525888 Msa0378700:CDS 50.0%
!! GCCCAGGTTTTCAAGAACAC+GGG - chr3_1:79525873-79525892 None:intergenic 50.0%
!! CGCCCAGGTTTTCAAGAACA+CGG - chr3_1:79525874-79525893 None:intergenic 50.0%
TATTAGTAGGATCAGCGCCC+AGG - chr3_1:79525889-79525908 None:intergenic 50.0%
GGCATAGGTTATTCGCATGG+TGG + chr3_1:79526016-79526035 Msa0378700:intron 50.0%
!! GTTACTGCTACTGTTGGCTC+GGG + chr3_1:79526056-79526075 Msa0378700:CDS 50.0%
TTTGACCAAGCTCGCAGAAG+AGG + chr3_1:79526124-79526143 Msa0378700:CDS 50.0%
CATTACCTCTTCTGCGAGCT+TGG - chr3_1:79526132-79526151 None:intergenic 50.0%
! TTGTTTCTCACCTGTCCCTC+AGG + chr3_1:79526213-79526232 Msa0378700:intron 50.0%
TGTTTCTCACCTGTCCCTCA+GGG + chr3_1:79526214-79526233 Msa0378700:intron 50.0%
CAGGATCCAACTTTCCCTGA+GGG - chr3_1:79526231-79526250 None:intergenic 50.0%
ACAGGATCCAACTTTCCCTG+AGG - chr3_1:79526232-79526251 None:intergenic 50.0%
GGGAAAGTTGGATCCTGTTG+TGG + chr3_1:79526234-79526253 Msa0378700:intron 50.0%
GGTGCGACGGCCTAAAATTT+GGG - chr3_1:79526287-79526306 None:intergenic 50.0%
TGGTGCGACGGCCTAAAATT+TGG - chr3_1:79526288-79526307 None:intergenic 50.0%
ATTGCTGTCTTCCCAACACC+AGG - chr3_1:79526337-79526356 None:intergenic 50.0%
GGGAAGACAGCAATTGCTGA+AGG + chr3_1:79526343-79526362 Msa0378700:CDS 50.0%
TTGCTGAAGGTCTTGCTCAG+CGG + chr3_1:79526356-79526375 Msa0378700:CDS 50.0%
!! CTTGCTCAGCGGATTGCAAA+TGG + chr3_1:79526367-79526386 Msa0378700:CDS 50.0%
! TCCTCACAAGTTGGCAAAGG+AGG + chr3_1:79526648-79526667 Msa0378700:intron 50.0%
TACAAGCAGACCCATGTCGA+GGG - chr3_1:79526803-79526822 None:intergenic 50.0%
GTAGCCGGTACTAAATACCG+TGG + chr3_1:79526820-79526839 Msa0378700:CDS 50.0%
ACCTCTCCTCAAACTCACCA+CGG - chr3_1:79526840-79526859 None:intergenic 50.0%
GTGCACACACTAATTGGAGC+AGG + chr3_1:79526919-79526938 Msa0378700:CDS 50.0%
TCTTGCAAGAGGCGAACTAC+AGG + chr3_1:79526987-79527006 Msa0378700:CDS 50.0%
! TGGGAAAAGGTTCTGACCTC+TGG + chr3_1:79527149-79527168 Msa0378700:intron 50.0%
CAGCAGAGTGAACAACCAGT+AGG - chr3_1:79527289-79527308 None:intergenic 50.0%
GGAATCGTCTCTCCAAAGCT+GGG - chr3_1:79527409-79527428 None:intergenic 50.0%
TGGAATCGTCTCTCCAAAGC+TGG - chr3_1:79527410-79527429 None:intergenic 50.0%
GGGCAAAAATCGATCACTGC+AGG - chr3_1:79528248-79528267 None:intergenic 50.0%
AGTCCGTCTTCAACATGCAC+AGG + chr3_1:79528306-79528325 Msa0378700:CDS 50.0%
GTGGTTTCAGTTGCCAGAAG+AGG + chr3_1:79528430-79528449 Msa0378700:intron 50.0%
GGCACTTGTAGAGAAAGGCA+AGG + chr3_1:79529065-79529084 Msa0378700:CDS 50.0%
GATGAGCAAAGCAGAGAGTG+AGG + chr3_1:79529089-79529108 Msa0378700:CDS 50.0%
ACATATCGTGTCCTCCTGGA+CGG + chr3_1:79529152-79529171 Msa0378700:CDS 50.0%
ATCTGATCGCCTCCTCAAGA+TGG + chr3_1:79529206-79529225 Msa0378700:CDS 50.0%
ACACAAGCGAGTCATTGGTC+AGG + chr3_1:79529239-79529258 Msa0378700:CDS 50.0%
!! CTTTTCTGGTCCAACTGGTG+TGG + chr3_1:79529347-79529366 Msa0378700:CDS 50.0%
! TTTCTGGTCCAACTGGTGTG+GGG + chr3_1:79529349-79529368 Msa0378700:CDS 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG + chr3_1:79529362-79529381 Msa0378700:CDS 50.0%
GTAGTAGGCAGCCAATGCTT+TGG - chr3_1:79529388-79529407 None:intergenic 50.0%
!! GCATTGGCTGCCTACTACTT+TGG + chr3_1:79529390-79529409 Msa0378700:CDS 50.0%
GGTTCACCTCCTGGATATGT+TGG + chr3_1:79529483-79529502 Msa0378700:CDS 50.0%
CAGGCAACTCACAAAACTGG+AGG + chr3_1:79529863-79529882 Msa0378700:CDS 50.0%
AGCAGACATAATGCTCAGGG+AGG + chr3_1:79529896-79529915 Msa0378700:CDS 50.0%
GATGGCTCTTCTTAAAGGCC+TGG - chr3_1:79530018-79530037 None:intergenic 50.0%
! AGCCATCATGCGACTTTTGG+AGG + chr3_1:79530031-79530050 Msa0378700:CDS 50.0%
!! GCGACTTTTGGAGGATAGCA+TGG + chr3_1:79530040-79530059 Msa0378700:CDS 50.0%
CTCGCCAGAGAGATCAAAGA+GGG + chr3_1:79530074-79530093 Msa0378700:CDS 50.0%
GTCACCCTCTTTGATCTCTC+TGG - chr3_1:79530081-79530100 None:intergenic 50.0%
AGAGGGTGACTCCGTAATAG+TGG + chr3_1:79530091-79530110 Msa0378700:CDS 50.0%
CTGCTAAGGGAAAACGTGAC+TGG - chr3_1:79530303-79530322 None:intergenic 50.0%
CATGCAACCCTGTACATTGC+GGG - chr3_1:79530632-79530651 None:intergenic 50.0%
!! GGGAATCATGGCTCGGGTTT+TGG + chr3_1:79524401-79524420 Msa0378700:exon 55.0%
TTGTGCCCAACCACTAGACC+AGG - chr3_1:79524444-79524463 None:intergenic 55.0%
CAATTTCTACACGGCGGGCA+AGG + chr3_1:79524631-79524650 Msa0378700:CDS 55.0%
! CGGGGTTTGGAGCAATCACT+TGG - chr3_1:79525356-79525375 None:intergenic 55.0%
AGGTCTTCTTCGAGAGGGTG+AGG + chr3_1:79525838-79525857 Msa0378700:CDS 55.0%
GGTCTTCTTCGAGAGGGTGA+GGG + chr3_1:79525839-79525858 Msa0378700:CDS 55.0%
ACCTGTCCCTCAGGGAAAGT+TGG + chr3_1:79526222-79526241 Msa0378700:intron 55.0%
TCCAACTTTCCCTGAGGGAC+AGG - chr3_1:79526226-79526245 None:intergenic 55.0%
TGTGGCTGTCTTCCCACAAC+AGG - chr3_1:79526250-79526269 None:intergenic 55.0%
GCCTCCTTTGCCAACTTGTG+AGG - chr3_1:79526652-79526671 None:intergenic 55.0%
CTACAAGCAGACCCATGTCG+AGG - chr3_1:79526804-79526823 None:intergenic 55.0%
GACATGGGTCTGCTTGTAGC+CGG + chr3_1:79526805-79526824 Msa0378700:CDS 55.0%
ACCGTGGTGAGTTTGAGGAG+AGG + chr3_1:79526836-79526855 Msa0378700:CDS 55.0%
AGTTCGCCTCTTGCAAGAGC+TGG - chr3_1:79526985-79527004 None:intergenic 55.0%
! GGATCTAAGGGCGCAGATCT+CGG + chr3_1:79529044-79529063 Msa0378700:CDS 55.0%
CATATCGTGTCCTCCTGGAC+GGG + chr3_1:79529153-79529172 Msa0378700:CDS 55.0%
ATCAACAGGAATGCCCGTCC+AGG - chr3_1:79529169-79529188 None:intergenic 55.0%
TCGACGGATAGCCCGACTAA+TGG - chr3_1:79529280-79529299 None:intergenic 55.0%
TCAATCCAACCCGTGCTCGA+CGG - chr3_1:79529296-79529315 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+TGG - chr3_1:79529360-79529379 None:intergenic 55.0%
GGACAGTAAAGGCCGAACTG+TGG + chr3_1:79529641-79529660 Msa0378700:CDS 55.0%
GAGAAAGGAGGTCGCCGAAT+TGG + chr3_1:79529717-79529736 Msa0378700:CDS 55.0%
AAAGGCCTGGCTCCATAGCT+AGG - chr3_1:79530005-79530024 None:intergenic 55.0%
GCTCGCCAGAGAGATCAAAG+AGG + chr3_1:79530073-79530092 Msa0378700:CDS 55.0%
! CAAGAGGAGGCAAGGCGTCT+TGG + chr3_1:79524726-79524745 Msa0378700:CDS 60.0%
CTCGAGGAAGCTCGCCAACT+TGG + chr3_1:79524951-79524970 Msa0378700:CDS 60.0%
ATTGGAGCAGGAGCAGCCGA+AGG + chr3_1:79526931-79526950 Msa0378700:CDS 60.0%
GAGAGTGAGGCAGCAGACGA+AGG + chr3_1:79529102-79529121 Msa0378700:CDS 60.0%
AACAGGAATGCCCGTCCAGG+AGG - chr3_1:79529166-79529185 None:intergenic 60.0%
AGGGACAGGGTGGTTGACGA+AGG + chr3_1:79529972-79529991 Msa0378700:CDS 60.0%
!! AGGCACTGGTATCGCCGCCA+AGG + chr3_1:79524797-79524816 Msa0378700:CDS 65.0%
GTCGGGCTATCCGTCGAGCA+CGG + chr3_1:79529283-79529302 Msa0378700:CDS 65.0%
TCGGGCTATCCGTCGAGCAC+GGG + chr3_1:79529284-79529303 Msa0378700:CDS 65.0%
GCTATCCGTCGAGCACGGGT+TGG + chr3_1:79529288-79529307 Msa0378700:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79523481 79530717 79523481 ID=Msa0378700;Name=Msa0378700
chr3_1 mRNA 79523481 79530717 79523481 ID=Msa0378700-mRNA-1;Parent=Msa0378700;Name=Msa0378700-mRNA-1;_AED=0.04;_eAED=0.04;_QI=234|1|1|1|0.88|0.8|10|521|922
chr3_1 exon 79523481 79523697 79523481 ID=Msa0378700-mRNA-1:exon:19538;Parent=Msa0378700-mRNA-1
chr3_1 exon 79524391 79524972 79524391 ID=Msa0378700-mRNA-1:exon:19539;Parent=Msa0378700-mRNA-1
chr3_1 exon 79525804 79525919 79525804 ID=Msa0378700-mRNA-1:exon:19540;Parent=Msa0378700-mRNA-1
chr3_1 exon 79526023 79526145 79526023 ID=Msa0378700-mRNA-1:exon:19541;Parent=Msa0378700-mRNA-1
chr3_1 exon 79526235 79526420 79526235 ID=Msa0378700-mRNA-1:exon:19542;Parent=Msa0378700-mRNA-1
chr3_1 exon 79526793 79527008 79526793 ID=Msa0378700-mRNA-1:exon:19543;Parent=Msa0378700-mRNA-1
chr3_1 exon 79527356 79527573 79527356 ID=Msa0378700-mRNA-1:exon:19544;Parent=Msa0378700-mRNA-1
chr3_1 exon 79528252 79528327 79528252 ID=Msa0378700-mRNA-1:exon:19545;Parent=Msa0378700-mRNA-1
chr3_1 exon 79528440 79528529 79528440 ID=Msa0378700-mRNA-1:exon:19546;Parent=Msa0378700-mRNA-1
chr3_1 exon 79529018 79530717 79529018 ID=Msa0378700-mRNA-1:exon:19547;Parent=Msa0378700-mRNA-1
chr3_1 five_prime_UTR 79523481 79523697 79523481 ID=Msa0378700-mRNA-1:five_prime_utr;Parent=Msa0378700-mRNA-1
chr3_1 five_prime_UTR 79524391 79524407 79524391 ID=Msa0378700-mRNA-1:five_prime_utr;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79524408 79524972 79524408 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79525804 79525919 79525804 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79526023 79526145 79526023 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79526235 79526420 79526235 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79526793 79527008 79526793 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79527356 79527573 79527356 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79528252 79528327 79528252 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79528440 79528529 79528440 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 CDS 79529018 79530196 79529018 ID=Msa0378700-mRNA-1:cds;Parent=Msa0378700-mRNA-1
chr3_1 three_prime_UTR 79530197 79530717 79530197 ID=Msa0378700-mRNA-1:three_prime_utr;Parent=Msa0378700-mRNA-1
Gene Sequence

>Msa0378700

ATGGCTCGGGTTTTGGCTCAGTCGATTAATGTTCCTGGTCTAGTGGTTGGGCACAAGCAAAGTCAACATAAGGGATCGGGAAAATCTAAAAGATCAGTTAAAATGATGTGTGCTTTGCGAACAAGTGGATTAAGAATGCCAGGTTTCTCAGGACTTCGTACTATCAATCATTTGGATACTATGCTGAAACCTGGGCTAGATTTTCACGCAAAGGTATCAATGGCAATTTCTACACGGCGGGCAAGGGCTAAGAGAATCATACCTAGAGCCATGTTTGAGCGTTTCACGGAGAAAGCAATCAAAGTGATAATGTTAGCTCAAGAGGAGGCAAGGCGTCTTGGTCACAATTTTGTTGGAACAGAGCAGATTCTACTGGGTCTTATTGGTGAAGGCACTGGTATCGCCGCCAAGGTTTTAAAGTCTATGGGAATCAACCTTAAAGATGCACGAGTGGAAGTGGAGAAGATAATTGGAAGAGGTAGTGGATTTGTTGCCGTTGAAATTCCGTTTACTCCTCGTGCAAAGCGTGTATTGGAACTTTCACTCGAGGAAGCTCGCCAACTTGGGCACAATTATATTGGATCAGAACACTTGCTTCTAGGTCTTCTTCGAGAGGGTGAGGGTGTAGCAGCCCGTGTTCTTGAAAACCTGGGCGCTGATCCTACTAATATTCGCACACAGGTTATTCGCATGGTGGGTGAGAGTGCTGACAATGTTACTGCTACTGTTGGCTCGGGAAGTAGTAACAATAAAACACCAACTTTGGAGGAGTATGGAACCAATTTGACCAAGCTCGCAGAAGAGGGAAAGTTGGATCCTGTTGTGGGAAGACAGCCACAAATTGAACGTGTCACCCAAATTTTAGGCCGTCGCACCAAAAATAATCCTTGTCTTATTGGAGAACCTGGTGTTGGGAAGACAGCAATTGCTGAAGGTCTTGCTCAGCGGATTGCAAATGGTGATGTACCTGAAACAATCGAGGGAAAAAAGGTTATAACCCTCGACATGGGTCTGCTTGTAGCCGGTACTAAATACCGTGGTGAGTTTGAGGAGAGGTTGAAGAAACTGATGGAAGAAATCAAACAAAGTGATGATATAATACTTTTTATCGATGAAGTGCACACACTAATTGGAGCAGGAGCAGCCGAAGGTGCAATTGATGCTGCTAACATACTAAAACCAGCTCTTGCAAGAGGCGAACTACAGTGTATTGGAGCCACAACATTGGATGAATACAGGAAGCACATCGAAAAAGACCCAGCTTTGGAGAGACGATTCCAGCCAGTTAAAGTACCAGAACCAACTGTTGATGAAACCATACAAATACTGAAAGGACTTAGAGAACGTTATGAAATTCACCACAAGCTTCGATATACTGATGACGCTCTTATAGCTGCTGCGCAACTTTCATACCAGTATATCAGTGATCGATTTTTGCCCGACAAAGCCATTGATTTGATTGATGAAGCTGGTTCACGAGTCCGTCTTCAACATGCACAGTTGCCAGAAGAGGCAAAAGAACTTGACAAGGAGGTCAGGAAGATTGTTAAAGAGAAAGAGGAATTTGTTCGCAACCAAGACTTTGAAAAGGCTGGAGAACTACGTGATAAAGAAATGGATCTAAGGGCGCAGATCTCGGCACTTGTAGAGAAAGGCAAGGAGATGAGCAAAGCAGAGAGTGAGGCAGCAGACGAAGGTCCTATTGTGACTGAAGTTGACATTCAACATATCGTGTCCTCCTGGACGGGCATTCCTGTTGATAAAGTCTCAGCAGATGAATCTGATCGCCTCCTCAAGATGGAAGATACTTTACACAAGCGAGTCATTGGTCAGGATGAAGCAGTAGAAGCCATTAGTCGGGCTATCCGTCGAGCACGGGTTGGATTGAAGAACCCTAACCGTCCAATTGCTAGCTTCATCTTTTCTGGTCCAACTGGTGTGGGGAAGTCTGAATTGGCCAAAGCATTGGCTGCCTACTACTTTGGCTCTGAAGAAGCCATGATTCGTCTTGACATGAGTGAGTTTATGGAAAGGCACACTGTCTCCAAACTTATTGGTTCACCTCCTGGATATGTTGGTTACACTGAAGGTGGTCAGTTGACTGAAGCAGTTCGTCGTCGTCCTTACACTGTTGTACTCTTTGATGAGATCGAGAAAGCCCATCCTGATGTATTCAACATGATGCTTCAGATCCTTGAAGATGGAAGACTAACGGACAGTAAAGGCCGAACTGTGGATTTCAAGAACACACTTCTTATAATGACGTCAAATGTTGGAAGCAGTGTGATTGAGAAAGGAGGTCGCCGAATTGGATTCGATCTTGATTATGATGAGAAAGACAGCAGTTATAATAGAATCAAGAGTTTGGTGACTGAGGAACTAAAACAATACTTCAGGCCAGAGTTTTTAAATAGGTTGGATGAAATGATTGTTTTCAGGCAACTCACAAAACTGGAGGTGAAGGAAATAGCAGACATAATGCTCAGGGAGGTGTTTCAGAGACTGAAGAACAAAGAAATTGAACTTCAAGTAACAGAAAGATTTAGGGACAGGGTGGTTGACGAAGGTTATAATCCTAGCTATGGAGCCAGGCCTTTAAGAAGAGCCATCATGCGACTTTTGGAGGATAGCATGGCTGAGAAGATGCTCGCCAGAGAGATCAAAGAGGGTGACTCCGTAATAGTGGATGTTGATTCCGACGGTAATGTGATTGTTCTCAATGGTACCAGCGGTACTCAAGAGTCATTACCAGAGGCTCTTGCTATATAA
Protein sequence

>Msa0378700

MARVLAQSINVPGLVVGHKQSQHKGSGKSKRSVKMMCALRTSGLRMPGFSGLRTINHLDTMLKPGLDFHAKVSMAISTRRARAKRIIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADNVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEFVRNQDFEKAGELRDKEMDLRAQISALVEKGKEMSKAESEAADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRVIGQDEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLREVFQRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGTSGTQESLPEALAI*