AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411410 MtrunA17_Chr1g0201021 98.249 571 10 0 1 571 1 571 0.0 1178
Msa1411410 MtrunA17_Chr3g0130101 52.261 199 90 1 13 211 1 194 7.73e-69 226
Msa1411410 MtrunA17_Chr8g0364791 56.000 175 77 0 20 194 7 181 5.42e-67 224
Msa1411410 MtrunA17_Chr8g0384201 54.857 175 79 0 20 194 7 181 2.46e-65 221
Msa1411410 MtrunA17_Chr6g0481091 59.006 161 66 0 21 181 8 168 8.88e-61 201
Msa1411410 MtrunA17_Chr5g0433781 61.728 162 61 1 21 181 8 169 9.99e-61 212
Msa1411410 MtrunA17_Chr3g0092671 46.154 247 119 5 21 254 7 252 1.53e-59 207
Msa1411410 MtrunA17_Chr3g0109821 60.494 162 62 2 21 180 8 169 4.08e-59 208
Msa1411410 MtrunA17_Chr2g0309891 58.065 155 64 1 17 170 4 158 4.92e-58 197
Msa1411410 MtrunA17_Chr1g0197361 55.882 170 73 2 21 189 10 178 5.45e-58 204
Msa1411410 MtrunA17_Chr1g0197351 56.111 180 72 2 18 191 41 219 2.10e-57 199
Msa1411410 MtrunA17_Chr5g0400461 56.410 156 58 2 21 169 8 160 6.44e-53 183
Msa1411410 MtrunA17_Chr4g0054791 55.696 158 67 1 15 169 2 159 1.28e-52 182
Msa1411410 MtrunA17_Chr3g0128111 51.534 163 75 1 8 170 35 193 4.30e-52 178
Msa1411410 MtrunA17_Chr3g0128151 52.601 173 79 2 1 170 1 173 1.57e-50 183
Msa1411410 MtrunA17_Chr5g0428991 49.714 175 82 1 1 169 1 175 5.47e-48 177
Msa1411410 MtrunA17_Chr4g0018391 49.333 150 73 2 21 169 9 156 2.96e-47 168
Msa1411410 MtrunA17_Chr2g0309331 47.682 151 75 3 21 169 12 160 7.74e-46 164
Msa1411410 MtrunA17_Chr5g0405211 52.672 131 61 1 21 150 10 140 9.98e-46 164
Msa1411410 MtrunA17_Chr6g0461661 42.718 206 105 7 22 221 21 219 1.34e-45 165
Msa1411410 MtrunA17_Chr4g0060931 47.853 163 81 2 15 175 13 173 2.17e-45 164
Msa1411410 MtrunA17_Chr4g0056541 46.067 178 85 6 21 194 9 179 3.02e-45 164
Msa1411410 MtrunA17_Chr2g0316971 51.266 158 69 4 21 173 25 179 3.03e-45 164
Msa1411410 MtrunA17_Chr8g0372121 47.333 150 76 2 21 169 8 155 4.70e-45 161
Msa1411410 MtrunA17_Chr4g0017921 49.333 150 72 2 21 169 10 156 1.02e-44 162
Msa1411410 MtrunA17_Chr3g0091921 49.045 157 76 2 21 175 18 172 1.04e-44 160
Msa1411410 MtrunA17_Chr5g0417791 47.134 157 77 2 17 169 1 155 1.43e-44 159
Msa1411410 MtrunA17_Chr6g0453131 50.000 162 67 5 20 170 16 174 1.60e-44 162
Msa1411410 MtrunA17_Chr5g0398971 47.682 151 76 3 21 169 9 158 1.73e-44 161
Msa1411410 MtrunA17_Chr2g0318081 45.283 159 85 1 17 175 14 170 2.03e-44 161
Msa1411410 MtrunA17_Chr8g0361731 47.024 168 72 5 15 170 12 174 2.75e-44 162
Msa1411410 MtrunA17_Chr1g0200561 48.750 160 75 3 21 177 21 176 3.37e-44 160
Msa1411410 MtrunA17_Chr4g0042561 46.497 157 78 2 21 173 11 165 5.16e-44 157
Msa1411410 MtrunA17_Chr4g0076731 50.327 153 71 3 20 171 55 203 5.60e-44 162
Msa1411410 MtrunA17_Chr7g0252971 46.012 163 73 4 21 170 10 170 9.34e-44 159
Msa1411410 MtrunA17_Chr6g0453451 49.367 158 74 4 21 175 22 176 1.33e-43 158
Msa1411410 MtrunA17_Chr3g0139331 50.955 157 71 3 21 175 13 165 1.46e-43 158
Msa1411410 MtrunA17_Chr5g0417001 45.963 161 75 3 20 170 15 173 1.48e-43 159
Msa1411410 MtrunA17_Chr3g0124761 49.351 154 72 3 21 171 9 159 1.80e-43 156
Msa1411410 MtrunA17_Chr2g0318101 48.980 147 71 2 6 150 2 146 4.71e-43 157
Msa1411410 MtrunA17_Chr6g0484441 48.667 150 73 2 21 170 7 152 5.33e-43 156
Msa1411410 MtrunA17_Chr7g0253011 47.771 157 72 4 21 170 19 172 1.14e-42 157
Msa1411410 MtrunA17_Chr8g0384721 41.414 198 109 4 21 214 9 203 1.72e-42 154
Msa1411410 MtrunA17_Chr4g0038751 48.387 155 70 4 19 170 15 162 1.76e-42 154
Msa1411410 MtrunA17_Chr4g0047841 53.030 132 58 2 21 150 17 146 1.79e-42 155
Msa1411410 MtrunA17_Chr8g0346001 49.231 130 65 1 21 149 17 146 2.36e-42 157
Msa1411410 MtrunA17_Chr8g0359921 46.795 156 79 3 17 170 12 165 3.76e-42 154
Msa1411410 MtrunA17_Chr3g0130731 48.701 154 73 3 21 171 9 159 4.15e-42 153
Msa1411410 MtrunA17_Chr2g0326361 49.635 137 65 2 21 155 16 150 1.55e-41 152
Msa1411410 MtrunA17_Chr1g0147421 50.314 159 70 5 21 175 29 182 2.75e-41 152
Msa1411410 MtrunA17_Chr7g0214071 48.171 164 70 5 21 179 17 170 7.85e-41 148
Msa1411410 MtrunA17_Chr7g0263931 43.312 157 81 3 21 171 13 167 1.22e-39 147
Msa1411410 MtrunA17_Chr3g0144271 53.425 146 58 6 21 159 25 167 2.15e-39 149
Msa1411410 MtrunA17_Chr7g0217721 51.538 130 61 1 22 151 22 149 3.52e-39 146
Msa1411410 MtrunA17_Chr7g0217711 51.587 126 59 1 22 147 22 145 4.46e-39 141
Msa1411410 MtrunA17_Chr2g0311651 42.169 166 80 4 20 170 23 187 5.16e-38 142
Msa1411410 MtrunA17_Chr5g0442771 44.444 162 76 4 20 169 19 178 2.36e-37 140
Msa1411410 MtrunA17_Chr2g0311661 48.855 131 62 2 20 146 22 151 2.99e-37 139
Msa1411410 MtrunA17_Chr1g0183741 45.033 151 75 3 21 169 12 156 3.15e-36 136
Msa1411410 MtrunA17_Chr2g0312321 51.181 127 58 3 21 147 13 135 4.17e-36 137
Msa1411410 MtrunA17_Chr2g0321741 53.333 120 52 2 39 155 12 130 1.04e-35 137
Msa1411410 MtrunA17_Chr8g0345671 53.968 126 54 3 22 144 14 138 3.96e-35 136
Msa1411410 MtrunA17_Chr7g0261411 44.966 149 74 3 21 167 12 154 5.62e-35 133
Msa1411410 MtrunA17_Chr8g0345711 47.794 136 66 4 13 144 5 139 1.60e-33 125
Msa1411410 MtrunA17_Chr8g0345691 47.368 152 70 6 13 155 5 155 3.27e-33 131
Msa1411410 MtrunA17_Chr8g0385991 47.656 128 61 2 21 146 16 139 2.20e-31 121
Msa1411410 MtrunA17_Chr3g0131911 40.719 167 85 3 21 177 16 178 3.78e-31 121
Msa1411410 MtrunA17_Chr3g0113001 37.017 181 80 5 71 223 15 189 1.08e-30 121
Msa1411410 MtrunA17_Chr7g0266701 42.236 161 81 6 21 170 6 165 3.40e-30 119
Msa1411410 MtrunA17_Chr8g0345731 45.736 129 63 5 22 144 27 154 3.13e-28 110
Msa1411410 MtrunA17_Chr2g0321631 39.752 161 89 5 19 171 4 164 1.62e-27 111
Msa1411410 MtrunA17_Chr8g0345741 44.915 118 61 3 30 144 2 118 9.09e-27 106
Msa1411410 MtrunA17_Chr4g0026141 44.961 129 65 4 21 144 7 134 2.60e-25 105
Msa1411410 MtrunA17_Chr3g0113031 49.038 104 46 3 84 181 3 105 3.88e-25 105
Msa1411410 MtrunA17_Chr8g0345721 36.774 155 65 4 22 144 38 191 2.44e-24 101
Msa1411410 MtrunA17_Chr8g0345701 41.892 148 65 6 15 144 2 146 4.46e-24 99.4
Msa1411410 MtrunA17_Chr4g0050701 39.062 128 66 4 21 146 13 130 1.51e-22 95.5
Msa1411410 MtrunA17_Chr7g0243371 39.394 99 58 1 74 170 17 115 8.78e-19 82.4
Msa1411410 MtrunA17_Chr7g0251651 31.361 169 106 5 3 168 2 163 2.61e-16 77.8
Msa1411410 MtrunA17_Chr7g0251661 31.746 126 82 3 22 146 13 135 9.13e-16 75.1
Msa1411410 MtrunA17_Chr8g0384351 33.333 126 66 5 21 146 12 119 3.18e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411410 AT1G34190.1 43.121 596 266 19 4 569 1 553 7.71e-139 414
Msa1411410 AT1G34180.1 41.356 590 286 19 6 567 3 560 3.13e-125 380
Msa1411410 AT1G34180.2 40.532 602 286 20 6 567 3 572 1.35e-121 370
Msa1411410 AT1G34180.3 47.354 378 161 10 6 370 3 355 4.77e-99 308
Msa1411410 AT1G34180.4 45.897 390 161 11 6 370 3 367 1.29e-95 300
Msa1411410 AT1G32870.1 37.655 563 285 16 21 567 12 524 6.36e-86 276
Msa1411410 AT1G32870.3 37.655 563 285 16 21 567 48 560 2.73e-85 276
Msa1411410 AT5G09330.5 41.791 335 173 8 21 339 8 336 1.22e-72 241
Msa1411410 AT5G09330.2 41.791 335 173 8 21 339 8 336 1.22e-72 241
Msa1411410 AT5G09330.4 41.791 335 173 8 21 339 8 336 1.22e-72 241
Msa1411410 AT5G09330.3 41.791 335 173 8 21 339 8 336 1.22e-72 241
Msa1411410 AT5G09330.1 41.791 335 173 8 21 339 8 336 1.22e-72 241
Msa1411410 AT1G32870.2 59.829 234 86 5 21 249 12 242 2.15e-70 236
Msa1411410 AT1G32870.2 27.444 266 161 7 330 567 257 518 5.13e-13 72.0
Msa1411410 AT5G04410.1 58.333 180 75 0 16 195 6 185 2.70e-69 234
Msa1411410 AT5G64060.1 54.971 171 77 0 21 191 8 178 3.50e-66 219
Msa1411410 AT3G10500.1 59.763 169 68 0 16 184 6 174 6.97e-65 221
Msa1411410 AT3G10480.2 45.560 259 131 5 1 250 6 263 1.21e-62 213
Msa1411410 AT3G10490.1 55.026 189 82 3 7 193 14 201 1.26e-61 204
Msa1411410 AT3G10480.1 45.385 260 131 6 1 250 6 264 2.12e-61 209
Msa1411410 AT1G65910.1 60.366 164 65 0 17 180 4 167 2.44e-61 214
Msa1411410 AT3G17730.1 61.589 151 58 0 21 171 8 158 5.59e-61 202
Msa1411410 AT3G10490.2 48.291 234 112 4 7 238 14 240 5.91e-61 209
Msa1411410 AT5G17260.1 60.000 150 59 1 21 169 8 157 7.13e-58 201
Msa1411410 AT3G03200.1 60.667 150 58 1 21 169 8 157 2.91e-57 199
Msa1411410 AT3G10480.3 43.580 257 104 5 1 217 6 261 9.74e-56 196
Msa1411410 AT1G54330.1 56.604 159 66 1 17 175 4 159 1.50e-52 182
Msa1411410 AT1G33060.1 56.494 154 66 1 17 169 21 174 2.55e-51 187
Msa1411410 AT1G33060.2 56.494 154 66 1 17 169 21 174 3.03e-51 187
Msa1411410 AT5G46590.1 53.289 152 69 2 21 170 8 159 4.69e-51 177
Msa1411410 AT4G35580.1 54.118 170 66 2 1 169 1 159 1.11e-50 182
Msa1411410 AT4G35580.2 54.118 170 66 2 1 169 1 159 1.13e-50 183
Msa1411410 AT4G35580.3 54.118 170 66 2 1 169 1 159 1.13e-50 183
Msa1411410 AT1G32510.1 54.430 158 64 2 21 170 8 165 2.48e-50 175
Msa1411410 AT4G17980.1 55.556 153 64 2 21 169 8 160 4.61e-50 174
Msa1411410 AT5G46590.2 55.319 141 61 2 21 159 8 148 5.78e-50 174
Msa1411410 AT4G17980.2 55.195 154 65 2 21 170 8 161 1.10e-49 174
Msa1411410 AT3G49530.2 45.274 201 98 3 17 215 10 200 1.85e-48 174
Msa1411410 AT5G24590.2 53.548 155 70 2 17 169 10 164 2.28e-48 174
Msa1411410 AT2G27300.1 53.289 152 67 2 7 155 2 152 4.80e-48 171
Msa1411410 AT3G49530.1 45.274 201 98 3 17 215 10 200 5.66e-48 174
Msa1411410 AT1G62700.1 44.134 179 89 5 21 194 9 181 1.07e-47 171
Msa1411410 AT1G62700.2 44.134 179 89 5 21 194 9 181 1.07e-47 171
Msa1411410 AT3G44290.2 52.448 143 64 2 16 155 11 152 1.36e-47 166
Msa1411410 AT5G22290.1 49.045 157 75 2 3 155 5 160 4.37e-47 168
Msa1411410 AT2G18060.3 44.211 190 97 4 15 202 5 187 5.16e-47 169
Msa1411410 AT2G18060.1 44.211 190 97 4 15 202 5 187 5.16e-47 169
Msa1411410 AT3G44290.1 52.448 143 64 2 16 155 11 152 6.05e-47 167
Msa1411410 AT4G36160.2 49.669 151 70 2 1 150 1 146 7.67e-47 169
Msa1411410 AT1G33280.1 50.667 150 70 2 21 169 10 156 2.82e-46 165
Msa1411410 AT1G12260.2 48.684 152 71 3 21 169 9 156 2.95e-46 166
Msa1411410 AT1G12260.1 44.068 177 90 4 21 194 9 179 3.26e-46 167
Msa1411410 AT4G36160.1 53.435 131 60 1 21 150 12 142 3.53e-46 167
Msa1411410 AT4G36160.3 53.435 131 60 1 21 150 12 142 3.53e-46 167
Msa1411410 AT1G69490.1 45.312 192 96 5 21 208 11 197 5.68e-46 163
Msa1411410 AT5G66300.1 46.951 164 85 2 21 183 14 176 7.29e-46 163
Msa1411410 AT4G27410.2 47.403 154 79 1 17 170 12 163 8.07e-46 163
Msa1411410 AT5G07680.1 47.853 163 81 2 15 175 13 173 1.01e-45 164
Msa1411410 AT4G10350.1 48.667 150 76 1 21 169 11 160 1.41e-45 164
Msa1411410 AT5G07680.2 47.826 161 80 2 17 175 1 159 1.66e-45 163
Msa1411410 AT5G61430.1 47.853 163 81 2 15 175 12 172 1.97e-45 164
Msa1411410 AT5G39820.1 51.049 143 64 3 6 146 9 147 8.16e-45 162
Msa1411410 AT1G01720.1 44.865 185 89 5 13 188 1 181 8.38e-45 160
Msa1411410 AT5G39610.1 50.000 160 70 3 21 175 22 176 1.18e-44 160
Msa1411410 AT5G62380.2 53.435 131 60 1 21 150 9 139 1.28e-44 162
Msa1411410 AT5G62380.1 53.435 131 60 1 21 150 9 139 1.28e-44 162
Msa1411410 AT1G71930.2 44.444 180 85 5 16 191 5 173 1.40e-44 161
Msa1411410 AT1G71930.1 44.444 180 85 5 16 191 5 173 1.40e-44 161
Msa1411410 AT3G15500.1 47.059 153 79 1 17 169 12 162 3.25e-44 160
Msa1411410 AT1G79580.3 47.097 155 77 3 17 169 15 166 5.44e-44 160
Msa1411410 AT1G79580.5 47.097 155 77 3 17 169 15 166 5.44e-44 160
Msa1411410 AT1G79580.4 47.097 155 77 3 17 169 15 166 5.44e-44 160
Msa1411410 AT1G79580.2 47.097 155 77 3 17 169 15 166 5.44e-44 160
Msa1411410 AT1G79580.1 47.097 155 77 3 17 169 15 166 5.44e-44 160
Msa1411410 AT3G29035.1 46.552 174 85 3 14 183 19 188 1.04e-43 158
Msa1411410 AT3G04060.1 48.780 164 73 4 15 172 16 174 1.17e-43 159
Msa1411410 AT5G18270.1 40.000 215 107 6 15 225 17 213 1.68e-43 158
Msa1411410 AT5G18270.2 40.000 215 107 6 15 225 17 213 1.88e-43 158
Msa1411410 AT2G17040.1 50.649 154 66 4 20 170 7 153 1.94e-43 156
Msa1411410 AT1G52890.1 45.283 159 85 1 17 175 12 168 3.56e-43 157
Msa1411410 AT4G27410.3 43.787 169 80 1 17 170 12 180 5.73e-43 156
Msa1411410 AT2G02450.1 48.366 153 74 3 20 171 52 200 8.84e-43 157
Msa1411410 AT2G24430.2 50.327 153 69 4 21 170 18 166 9.41e-43 155
Msa1411410 AT2G24430.1 50.327 153 69 4 21 170 18 166 9.41e-43 155
Msa1411410 AT1G77450.1 48.052 154 74 3 21 171 12 162 1.10e-42 154
Msa1411410 AT2G02450.2 48.366 153 74 3 20 171 52 200 1.17e-42 158
Msa1411410 AT3G18400.1 46.452 155 80 2 21 175 7 158 1.46e-42 155
Msa1411410 AT2G43000.1 47.059 153 78 2 18 169 17 167 1.50e-42 154
Msa1411410 AT1G61110.1 52.857 140 63 2 21 159 18 155 1.52e-42 155
Msa1411410 AT2G46770.1 46.667 150 76 2 1 149 1 147 1.55e-42 156
Msa1411410 AT3G61910.1 49.275 138 68 2 21 156 13 150 2.16e-42 155
Msa1411410 AT1G76420.1 50.968 155 67 4 21 171 24 173 2.76e-42 155
Msa1411410 AT3G15170.1 51.282 156 68 4 21 171 22 174 3.54e-42 154
Msa1411410 AT1G32770.1 50.388 129 63 1 21 148 18 146 3.63e-42 155
Msa1411410 AT1G26870.1 46.626 163 72 4 20 170 17 176 4.10e-42 157
Msa1411410 AT5G63790.1 46.452 155 75 3 22 171 53 204 5.70e-42 154
Msa1411410 AT5G63790.2 46.452 155 75 3 22 171 63 214 8.21e-42 153
Msa1411410 AT5G53950.1 50.641 156 67 5 21 170 19 170 1.06e-41 154
Msa1411410 AT5G08790.1 47.097 155 74 3 22 171 10 161 1.38e-41 152
Msa1411410 AT5G13180.1 47.853 163 77 3 16 176 11 167 3.74e-41 149
Msa1411410 AT3G04070.2 42.593 162 79 4 21 170 12 171 4.06e-41 152
Msa1411410 AT3G15510.1 38.571 210 104 4 23 219 21 218 7.11e-41 152
Msa1411410 AT3G04070.1 48.092 131 61 2 21 146 12 140 2.24e-40 150
Msa1411410 AT2G33480.1 48.701 154 74 1 16 169 12 160 1.50e-39 145
Msa1411410 AT2G33480.2 48.701 154 72 2 16 169 12 158 2.96e-39 145
Msa1411410 AT3G12977.1 44.156 154 83 2 21 173 20 171 6.68e-38 141
Msa1411410 AT1G56010.2 41.765 170 93 3 21 186 21 188 3.77e-37 140
Msa1411410 AT5G04395.1 42.683 164 79 3 2 150 10 173 5.13e-35 130
Msa1411410 AT1G52880.1 46.250 160 72 3 23 170 21 178 7.24e-35 134
Msa1411410 AT3G12910.1 48.485 132 60 3 20 146 22 150 6.87e-34 131
Msa1411410 AT4G28530.1 42.604 169 69 6 21 169 12 172 1.02e-31 126
Msa1411410 AT5G61430.2 50.467 107 51 1 71 175 3 109 1.19e-30 121
Msa1411410 AT3G44350.2 39.355 155 89 5 22 171 8 162 1.66e-28 114
Msa1411410 AT4G01550.1 38.857 175 94 5 16 183 1 169 1.78e-28 119
Msa1411410 AT5G22380.1 40.764 157 86 6 22 171 8 164 6.17e-28 112
Msa1411410 AT3G44350.1 40.523 153 86 5 22 169 8 160 1.01e-27 109
Msa1411410 AT3G10490.4 45.205 146 72 3 94 238 2 140 1.24e-27 114
Msa1411410 AT3G10490.3 45.205 146 72 3 94 238 2 140 1.24e-27 114
Msa1411410 AT4G10350.2 45.918 98 53 0 72 169 16 113 8.69e-27 110
Msa1411410 AT1G56010.1 44.444 117 62 1 73 186 5 121 1.09e-26 109
Msa1411410 AT3G04420.2 40.800 125 72 1 22 144 6 130 2.98e-26 109
Msa1411410 AT3G12977.2 46.154 104 55 1 71 173 15 118 4.17e-26 107
Msa1411410 AT3G04420.1 40.800 125 72 1 22 144 6 130 1.08e-25 108
Msa1411410 AT4G01520.1 39.706 136 77 3 16 146 1 136 1.18e-24 105
Msa1411410 AT4G01540.3 39.706 136 77 3 16 146 1 136 2.00e-24 106
Msa1411410 AT4G01540.2 39.706 136 77 3 16 146 1 136 2.11e-24 106
Msa1411410 AT4G01540.1 39.706 136 77 3 16 146 1 136 2.75e-24 106
Msa1411410 AT4G01540.4 39.706 136 77 3 16 146 1 136 2.91e-24 105
Msa1411410 AT5G64530.2 39.552 134 65 5 17 148 1 120 6.76e-23 95.9
Msa1411410 AT5G64530.1 40.152 132 63 5 17 146 1 118 4.05e-22 94.7
Msa1411410 AT1G02230.1 40.625 128 68 3 22 144 6 130 1.07e-21 97.4
Msa1411410 AT1G02250.1 38.346 133 74 3 17 144 1 130 2.57e-21 96.3
Msa1411410 AT2G33480.3 46.000 100 52 1 72 169 4 103 3.79e-21 92.4
Msa1411410 AT1G02220.1 37.692 130 76 2 17 144 1 127 7.15e-20 92.4
Msa1411410 AT4G28530.2 45.370 108 41 3 21 112 12 117 3.03e-19 89.4
Msa1411410 AT1G01010.1 37.589 141 76 3 17 147 1 139 9.36e-18 86.3
Msa1411410 AT5G14000.2 32.283 127 80 2 22 146 18 140 4.56e-17 79.0
Msa1411410 AT5G22290.2 56.667 60 22 1 100 155 2 61 7.14e-17 80.9
Msa1411410 AT2G18060.2 39.583 96 55 2 100 194 3 96 3.88e-16 79.3
Msa1411410 AT3G56530.1 31.544 149 97 4 21 167 54 199 5.54e-16 79.7
Msa1411410 AT5G14000.1 30.263 152 97 3 22 171 18 162 5.81e-16 77.4
Msa1411410 AT2G43000.2 42.045 88 50 1 83 169 2 89 2.45e-15 75.5
Msa1411410 AT3G55210.1 30.000 160 94 4 21 167 13 167 4.90e-15 76.3
Msa1411410 AT1G28470.1 34.659 176 85 11 17 172 74 239 1.02e-11 66.6

Find 166 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAAATTTAAGACTATT+AGG 0.168141 tig0023765:-27462 Msa1411410:CDS
GCCCATTCTTCTTCTTTAAA+TGG 0.196298 tig0023765:+29273 None:intergenic
ACAGTTTGATTTGCGTCTTC+TGG 0.203030 tig0023765:+28220 None:intergenic
TCTAGAATTAAAGCTGAATT+TGG 0.211729 tig0023765:+27269 None:intergenic
CCATACTGTTCACCGTTCTT+AGG 0.238231 tig0023765:+29300 None:intergenic
GAAATTGATGAAATCATTAA+AGG 0.241716 tig0023765:-29141 Msa1411410:CDS
GATCGAGATGGGTGCGGTTT+CGG 0.256333 tig0023765:-30807 Msa1411410:exon
CAAAATATCGAGAGAGAAAA+TGG 0.259622 tig0023765:+31147 None:intergenic
ATCAAACTGTTGATGAATTC+TGG 0.264215 tig0023765:-28207 Msa1411410:CDS
CTGAAAATCCCTTGGTAAAT+CGG 0.287533 tig0023765:-27653 Msa1411410:CDS
AAAACCCACAACAAAATAAT+AGG 0.305550 tig0023765:+31063 None:intergenic
TATTGTAAGGTGAAAGGTTT+AGG 0.308091 tig0023765:+31195 None:intergenic
GCTTTCTTGTGGGTTTCTAT+TGG 0.323704 tig0023765:-27480 Msa1411410:CDS
TCAGCTTTAATTCTAGAGTA+AGG 0.332283 tig0023765:-27263 Msa1411410:three_prime_UTR
GAACAATCTTTCCTGAAAAC+TGG 0.333240 tig0023765:-29742 Msa1411410:CDS
TCCTCCCCGCTTTGAATGTT+CGG 0.334586 tig0023765:+28505 None:intergenic
TCGTCAATTCCAACTATCTA+AGG 0.339515 tig0023765:-30926 Msa1411410:five_prime_UTR
TGCTTTATGTGCTTTCTTGT+GGG 0.339931 tig0023765:-27490 Msa1411410:CDS
TTGGAAATTTAAGACTATTA+GGG 0.350725 tig0023765:-27461 Msa1411410:CDS
TGATGAAGAAACACGAAATA+TGG 0.352461 tig0023765:-28686 Msa1411410:CDS
GAGATGTTTCTTTGTGGCCT+GGG 0.356280 tig0023765:-28331 Msa1411410:CDS
TTCAACTCAAGGTAAGGTTT+AGG 0.361601 tig0023765:-27297 Msa1411410:three_prime_UTR
AAATAATAGGATCGAACCTC+TGG 0.362954 tig0023765:+31076 None:intergenic
TATCTATAGCAGCAAAACTT+TGG 0.381183 tig0023765:+27410 None:intergenic
GCACATAAAGCAATAAGAAT+CGG 0.388701 tig0023765:+27501 None:intergenic
TGATTCAAGCCTTAGATAGT+TGG 0.389714 tig0023765:+30917 None:intergenic
TCCCGCGTAGTATCAAGTTT+TGG 0.394458 tig0023765:-27157 Msa1411410:three_prime_UTR
GGTACGAGGATTCGAGGATT+AGG 0.400673 tig0023765:+31098 None:intergenic
CACTCAACACATCTTCAAAC+TGG 0.409957 tig0023765:+28377 None:intergenic
TAAGACATGCCGTGATGTTA+AGG 0.415877 tig0023765:-29485 Msa1411410:intron
ATCTGAAAAGGAAGATTTGT+GGG 0.421125 tig0023765:-30694 Msa1411410:CDS
TTGATTTGCGTCTTCTGGAT+TGG 0.421770 tig0023765:+28225 None:intergenic
AGAGATGTTTCTTTGTGGCC+TGG 0.424888 tig0023765:-28332 Msa1411410:CDS
GAAATGTGATATACAATTCT+CGG 0.433492 tig0023765:-29612 Msa1411410:CDS
ATGAAGAGAGCAGGCAGAAA+GGG 0.435247 tig0023765:-27543 Msa1411410:CDS
GTTGAAGTTCAACGTTATCA+AGG 0.436333 tig0023765:-30666 Msa1411410:CDS
GAATCAGTCAATATTGTTGT+GGG 0.439215 tig0023765:-30900 Msa1411410:five_prime_UTR
AAAGGTTTAGGATAGTGTTA+TGG 0.442553 tig0023765:+31207 None:intergenic
TTGCTTTATGTGCTTTCTTG+TGG 0.443767 tig0023765:-27491 Msa1411410:CDS
CCTAAGAACGGTGAACAGTA+TGG 0.447178 tig0023765:-29300 Msa1411410:CDS
CTTCTGGATTGGACAACAAC+TGG 0.447857 tig0023765:+28236 None:intergenic
ACTTTGGATTTACATATTCA+AGG 0.452308 tig0023765:+27426 None:intergenic
CAATAAGAATCGGGAAGAAA+AGG 0.454768 tig0023765:+27511 None:intergenic
CACCATTTAAAGAAGAAGAA+TGG 0.455058 tig0023765:-29275 Msa1411410:CDS
TGTATTTGAAAATGTAGATT+CGG 0.456852 tig0023765:+28432 None:intergenic
GATGCAGAGATGTTTCTTTG+TGG 0.460432 tig0023765:-28337 Msa1411410:CDS
TAAATATTCAACTCAAGGTA+AGG 0.461844 tig0023765:-27303 Msa1411410:three_prime_UTR
CACATAAAGCAATAAGAATC+GGG 0.470798 tig0023765:+27502 None:intergenic
AAATTGATGAAATCATTAAA+GGG 0.472368 tig0023765:-29140 Msa1411410:CDS
TTAATGTAAATTCAGTTGAC+CGG 0.472399 tig0023765:-29230 Msa1411410:CDS
TAGTGGTGAGCGAACTGATT+GGG 0.473263 tig0023765:-29542 Msa1411410:CDS
TAGTGAGTTTGTGAGCTTGT+TGG 0.473308 tig0023765:+31315 None:intergenic
GAGGTGATGTCGTCGATGCC+AGG 0.473742 tig0023765:-30758 Msa1411410:CDS
TGAAAATCCCTTGGTAAATC+GGG 0.476781 tig0023765:-27652 Msa1411410:CDS
TGGTTATGTTGACTTTCCTC+AGG 0.478965 tig0023765:-29076 Msa1411410:intron
ACCATTTAAAGAAGAAGAAT+GGG 0.480249 tig0023765:-29274 Msa1411410:CDS
TCTTTCTCTCTAACAAATCC+AGG 0.483310 tig0023765:-28136 Msa1411410:intron
TGGTGATGTATTATCTGAAA+AGG 0.485179 tig0023765:-30706 Msa1411410:CDS
TGAATCAGTCAATATTGTTG+TGG 0.485192 tig0023765:-30901 Msa1411410:five_prime_UTR
CCTCTGGGTACGAGGATTCG+AGG 0.488887 tig0023765:+31092 None:intergenic
CAGCTTTAATTCTAGAGTAA+GGG 0.489608 tig0023765:-27262 Msa1411410:three_prime_UTR
AAAGAAACATCTCTGCATCT+TGG 0.490156 tig0023765:+28341 None:intergenic
CTTTGGATTTACATATTCAA+GGG 0.491520 tig0023765:+27427 None:intergenic
GGACTATTATGCACTTTACA+AGG 0.492066 tig0023765:-29346 Msa1411410:CDS
TGTTGTAAATATTCAACTCA+AGG 0.494233 tig0023765:-27308 Msa1411410:three_prime_UTR
AGAGTATGAAGGTTATTGTA+AGG 0.494765 tig0023765:+31182 None:intergenic
GATAGTGTTATGGTCAAAGA+AGG 0.494857 tig0023765:+31217 None:intergenic
CGACTAGACCTTCCACCGTT+AGG 0.494968 tig0023765:+29676 None:intergenic
ATCGAATGTCTAGCTTCAGC+AGG 0.496594 tig0023765:-27623 Msa1411410:CDS
GAAGGTTATTGTAAGGTGAA+AGG 0.497229 tig0023765:+31189 None:intergenic
ATCACCAACTCCTCATCTGT+TGG 0.497258 tig0023765:+30722 None:intergenic
AGGAAGCTAAGGTAAGTGGT+TGG 0.497513 tig0023765:+31237 None:intergenic
CATGGCTACTGGAAAGCTAC+TGG 0.501589 tig0023765:-29643 Msa1411410:CDS
TTGATGATTGAAGTCAAAGC+TGG 0.501672 tig0023765:+28579 None:intergenic
ACCTGCAGCAATGTTGTTGT+CGG 0.505799 tig0023765:+27584 None:intergenic
TATCTGAAAAGGAAGATTTG+TGG 0.507777 tig0023765:-30695 Msa1411410:CDS
ACATTGTCAACAGCAGCCTC+TGG 0.508902 tig0023765:+29201 None:intergenic
CAAATACCAGGTAAATCCTC+AGG 0.509072 tig0023765:+30620 None:intergenic
AACATCTCTGCATCTTGGTA+AGG 0.509554 tig0023765:+28346 None:intergenic
AGGAAACTGATGTGTACAAG+TGG 0.511941 tig0023765:-30646 Msa1411410:CDS
TTCGGAGTGGAAGTGACCTC+AGG 0.519504 tig0023765:+28523 None:intergenic
TAGATTCTCCTCAGCTCTGT+GGG 0.520308 tig0023765:-27715 Msa1411410:CDS
TGCAGCAATGTTGTTGTCGG+TGG 0.520896 tig0023765:+27587 None:intergenic
CATAACCATTCACATGTTGC+TGG 0.521973 tig0023765:+29091 None:intergenic
GAGCAACTAGACATGGCTAC+TGG 0.524027 tig0023765:-29654 Msa1411410:CDS
CAATCAGTTCGCTCACCACT+AGG 0.525126 tig0023765:+29544 None:intergenic
AGATGTTTCTTTGTGGCCTG+GGG 0.525648 tig0023765:-28330 Msa1411410:CDS
CTTTCCTGAAAACTGGAGAC+AGG 0.526319 tig0023765:-29735 Msa1411410:CDS
ATAACCTTCAGCTGGACTGC+GGG 0.526602 tig0023765:+28165 None:intergenic
GTTGGATGAAAGCGAAAACC+TGG 0.526637 tig0023765:+30740 None:intergenic
ACATGTTGCTGGTCAAGGAC+AGG 0.530141 tig0023765:+29102 None:intergenic
CTAGTGGTGAGCGAACTGAT+TGG 0.530398 tig0023765:-29543 Msa1411410:CDS
GAACCATCATAACCTTCAGC+TGG 0.532336 tig0023765:+28157 None:intergenic
TCATCCAACAGATGAGGAGT+TGG 0.537248 tig0023765:-30726 Msa1411410:CDS
ACTTGGATCAGGGAATATCA+TGG 0.537254 tig0023765:+28642 None:intergenic
CCACTCCGAACATTCAAAGC+GGG 0.539242 tig0023765:-28510 Msa1411410:CDS
TCTTCTGATCGAGATGGGTG+CGG 0.539716 tig0023765:-30813 Msa1411410:exon
GGTGTTGTGTGTGACTCTGT+CGG 0.542109 tig0023765:-27795 Msa1411410:CDS
ATCAGCTGCTGAAAATCCCT+TGG 0.543692 tig0023765:-27661 Msa1411410:CDS
TATGAAGAGAGCAGGCAGAA+AGG 0.544360 tig0023765:-27544 Msa1411410:CDS
ATATACAATTCTCGGTCAGT+TGG 0.550050 tig0023765:-29604 Msa1411410:CDS
CATGCATATATGAATAGCAC+TGG 0.554571 tig0023765:-28283 Msa1411410:CDS
CTTAAGCTCATCTTCATCCA+TGG 0.555126 tig0023765:+29504 None:intergenic
TGGAAGGTTCCTACAAAATG+AGG 0.557920 tig0023765:+31257 None:intergenic
ATGGTCAAAGAAGGAAGCTA+AGG 0.562583 tig0023765:+31226 None:intergenic
ACCGACAACAACATTGCTGC+AGG 0.564654 tig0023765:-27585 Msa1411410:CDS
TTTCTTCGTTAATAGACCCC+AGG 0.566378 tig0023765:+28314 None:intergenic
GCAGCTGATGCAGGAGTGGT+AGG 0.567625 tig0023765:+27675 None:intergenic
AAGAAGGAAGCTAAGGTAAG+TGG 0.567857 tig0023765:+31233 None:intergenic
CATTCACATGTTGCTGGTCA+AGG 0.569092 tig0023765:+29097 None:intergenic
AGCTAAGGTAAGTGGTTGGA+AGG 0.569646 tig0023765:+31241 None:intergenic
AGTCCAGCTGAAGGTTATGA+TGG 0.570391 tig0023765:-28160 Msa1411410:CDS
GGTCATGGATCAATTCTATG+AGG 0.570510 tig0023765:-28665 Msa1411410:CDS
TTCAGCAGCTGATGCAGGAG+TGG 0.571280 tig0023765:+27671 None:intergenic
CTTGACCAGCAACATGTGAA+TGG 0.574283 tig0023765:-29096 Msa1411410:CDS
GTGTATTTCTGAAGCACCTG+AGG 0.574286 tig0023765:-28539 Msa1411410:CDS
GGAAGTATCCTAACGGTGGA+AGG 0.576876 tig0023765:-29684 Msa1411410:CDS
TGTTCACCGTTCTTAGGACC+CGG 0.583775 tig0023765:+29306 None:intergenic
GCAGCAATGTTGTTGTCGGT+GGG 0.584407 tig0023765:+27588 None:intergenic
TGAAGAGAGCAGGCAGAAAG+GGG 0.585879 tig0023765:-27542 Msa1411410:CDS
TCGCTTTCATCCAACAGATG+AGG 0.586681 tig0023765:-30732 Msa1411410:CDS
TCTCTTCAGAATTAAATGAA+AGG 0.586845 tig0023765:-27373 Msa1411410:three_prime_UTR
TTCAAAGCCCGATTTACCAA+GGG 0.588762 tig0023765:+27645 None:intergenic
TAATGTAAATTCAGTTGACC+GGG 0.596335 tig0023765:-29229 Msa1411410:CDS
ATTCAAAGCCCGATTTACCA+AGG 0.600157 tig0023765:+27644 None:intergenic
CAGCAGCCTCTGGAACCTCC+CGG 0.601016 tig0023765:+29211 None:intergenic
ACTGCAACTATGAAGAGAGC+AGG 0.602471 tig0023765:-27552 Msa1411410:CDS
TGAAAACTGGAGACAGGCAA+TGG 0.602773 tig0023765:-29729 Msa1411410:CDS
AATAATAGGATCGAACCTCT+GGG 0.606378 tig0023765:+31077 None:intergenic
TTTGGATTTACATATTCAAG+GGG 0.609182 tig0023765:+27428 None:intergenic
GAAATTTAAGACTATTAGGG+AGG 0.609647 tig0023765:-27458 Msa1411410:CDS
CCCGCTTTGAATGTTCGGAG+TGG 0.613926 tig0023765:+28510 None:intergenic
AGAAACACGAAATATGGTCA+TGG 0.614827 tig0023765:-28680 Msa1411410:CDS
TGATTCAGTGCCTTTGAGTG+AGG 0.615063 tig0023765:+31285 None:intergenic
TCTAGAGTAAGGGCTTGTAT+CGG 0.617355 tig0023765:-27252 Msa1411410:three_prime_UTR
AGTTGACCGGGAGGTTCCAG+AGG 0.618649 tig0023765:-29217 Msa1411410:CDS
TGGGATCCTGAGGATTTACC+TGG 0.620679 tig0023765:-30626 Msa1411410:intron
GTAGATTCTCCTCAGCTCTG+TGG 0.621558 tig0023765:-27716 Msa1411410:CDS
TGTAAATTCAGTTGACCGGG+AGG 0.624909 tig0023765:-29226 Msa1411410:CDS
CATAACCTTCAGCTGGACTG+CGG 0.625001 tig0023765:+28164 None:intergenic
AACACCCGCAGTCCAGCTGA+AGG 0.628590 tig0023765:-28169 Msa1411410:CDS
TCAATTTCATCATCAAACAA+CGG 0.629730 tig0023765:+29156 None:intergenic
TTCTGCTGATTGTTTCAGTG+AGG 0.630580 tig0023765:-30777 Msa1411410:CDS
ACCAAAACTTGATACTACGC+GGG 0.631310 tig0023765:+27156 None:intergenic
CTAGTCACTACCTCACTCAA+AGG 0.632055 tig0023765:-31295 Msa1411410:five_prime_UTR
AGTGGACCGGGTCCTAAGAA+CGG 0.632315 tig0023765:-29312 Msa1411410:CDS
AACAAAGGCCCACAGAGCTG+AGG 0.632369 tig0023765:+27707 None:intergenic
TCTAGTCGAGCAACTAGACA+TGG 0.640127 tig0023765:-29661 Msa1411410:CDS
TATCTTGGCAGAGCTCCTAG+TGG 0.644063 tig0023765:-29559 Msa1411410:CDS
TCAACACATCTTCAAACTGG+AGG 0.645209 tig0023765:+28380 None:intergenic
TGATGATTGAAGTCAAAGCT+GGG 0.651527 tig0023765:+28580 None:intergenic
GGATCGAACCTCTGGGTACG+AGG 0.652799 tig0023765:+31084 None:intergenic
CACTCCGAACATTCAAAGCG+GGG 0.660148 tig0023765:-28509 Msa1411410:CDS
AAGGTAATACCTTAACATCA+CGG 0.661498 tig0023765:+29476 None:intergenic
GGAAACTGATGTGTACAAGT+GGG 0.664415 tig0023765:-30645 Msa1411410:CDS
GGTAGGTATTGAATCAACAA+AGG 0.665588 tig0023765:+27692 None:intergenic
AGAGATAGGAAGTATCCTAA+CGG 0.667183 tig0023765:-29691 Msa1411410:CDS
GATAGGAAGTATCCTAACGG+TGG 0.667673 tig0023765:-29688 Msa1411410:CDS
TCGAATGTCTAGCTTCAGCA+GGG 0.672244 tig0023765:-27622 Msa1411410:CDS
GAAGAGAGCAGGCAGAAAGG+GGG 0.676486 tig0023765:-27541 Msa1411410:CDS
TCCACTCCGAACATTCAAAG+CGG 0.683841 tig0023765:-28511 Msa1411410:CDS
GACCAAAACTTGATACTACG+CGG 0.691769 tig0023765:+27155 None:intergenic
TCCGAACATTCAAAGCGGGG+AGG 0.705397 tig0023765:-28506 Msa1411410:CDS
CCTCGAATCCTCGTACCCAG+AGG 0.706992 tig0023765:-31092 Msa1411410:five_prime_UTR
TGTGTACAAGTGGGATCCTG+AGG 0.709821 tig0023765:-30636 Msa1411410:CDS
GGTTATGCATGAGTACACCA+TGG 0.756724 tig0023765:-29521 Msa1411410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAATTTGATTTTTTAATT+AGG - tig0023765:27416-27435 Msa1411410:three_prime_UTR 10.0%
!!! GAAATTTGATTTTTTAATTA+GGG - tig0023765:27417-27436 Msa1411410:three_prime_UTR 10.0%
!! AATTTATTTCCTTAAAATAA+TGG - tig0023765:28508-28527 Msa1411410:CDS 10.0%
!! ATTTATTTCCTTAAAATAAT+GGG - tig0023765:28509-28528 Msa1411410:CDS 10.0%
!!! TTTAAAATTATTGTTTCTGT+TGG - tig0023765:28956-28975 Msa1411410:intron 15.0%
!! TTTGATATAAATTCATTATC+AGG - tig0023765:29026-29045 Msa1411410:intron 15.0%
!! AAATTGATGAAATCATTAAA+GGG - tig0023765:29253-29272 Msa1411410:CDS 15.0%
!!! AGTTTTTTTTTTTGTCAAAT+GGG + tig0023765:29517-29536 None:intergenic 15.0%
!!! AAGTTTTTTTTTTTGTCAAA+TGG + tig0023765:29518-29537 None:intergenic 15.0%
!!! AAGCTTTTTGAATAAATAAG+TGG + tig0023765:27364-27383 None:intergenic 20.0%
!!! TTTTGTTTTGTTATCTCTTT+TGG - tig0023765:27389-27408 Msa1411410:three_prime_UTR 20.0%
!!! TTTGTTTTGTTATCTCTTTT+GGG - tig0023765:27390-27409 Msa1411410:three_prime_UTR 20.0%
!! ATAACCAACAAAAAAAAACT+AGG + tig0023765:27866-27885 None:intergenic 20.0%
!!! TTGGTTATGTTTATGATTTT+TGG - tig0023765:27878-27897 Msa1411410:intron 20.0%
!!! GTTGGTTATATTAATGTTTT+TGG - tig0023765:27909-27928 Msa1411410:intron 20.0%
!!! ATGTTTTTGGTTTTGTTTAA+TGG - tig0023765:27953-27972 Msa1411410:intron 20.0%
!! TTCATGTTATGACTTATAAT+TGG - tig0023765:28181-28200 Msa1411410:CDS 20.0%
!! GAAATTGATGAAATCATTAA+AGG - tig0023765:29252-29271 Msa1411410:CDS 20.0%
!!! TTTTAGAAAAAAAATACTCC+AGG + tig0023765:29354-29373 None:intergenic 20.0%
!!! CATTTTTCCATGAATAATAT+AGG - tig0023765:29680-29699 Msa1411410:CDS 20.0%
!! TGTATTTGAAAATGTAGATT+CGG + tig0023765:29964-29983 None:intergenic 20.0%
!! ACAAAATTTAAACTCCATAA+AGG + tig0023765:30440-30459 None:intergenic 20.0%
!!! ATTGGAAATTTAAGACTATT+AGG - tig0023765:30931-30950 Msa1411410:five_prime_UTR 20.0%
!!! TTGGAAATTTAAGACTATTA+GGG - tig0023765:30932-30951 Msa1411410:five_prime_UTR 20.0%
!! CAAAAAAGAAAACAGAAATA+AGG + tig0023765:31215-31234 None:intergenic 20.0%
!!! CTTATTTCTGTTTTCTTTTT+TGG - tig0023765:31213-31232 Msa1411410:five_prime_UTR 20.0%
! TGAAAAATAACAGAGTATGA+AGG + tig0023765:27225-27244 None:intergenic 25.0%
!! ATTTTCTCTCTCGATATTTT+GGG - tig0023765:27248-27267 Msa1411410:three_prime_UTR 25.0%
! AAAACCCACAACAAAATAAT+AGG + tig0023765:27333-27352 None:intergenic 25.0%
!!! TTGTTTTGTTATCTCTTTTG+GGG - tig0023765:27391-27410 Msa1411410:three_prime_UTR 25.0%
!!! TTGACCTAGTTTTTTTTTGT+TGG - tig0023765:27859-27878 Msa1411410:intron 25.0%
!!! TGATTTTTGGTTTTGTTTGT+TGG - tig0023765:27891-27910 Msa1411410:intron 25.0%
!!! ATGTTTTTGGTTTTGTTTGT+TGG - tig0023765:27922-27941 Msa1411410:intron 25.0%
!!! GGTTTTGTTTAATGGTTATA+AGG - tig0023765:27961-27980 Msa1411410:intron 25.0%
! TGTACATAATATTCACAACA+AGG + tig0023765:28016-28035 None:intergenic 25.0%
! CCAAAATATCAAATAAGCAT+AGG + tig0023765:28062-28081 None:intergenic 25.0%
!! CCTATGCTTATTTGATATTT+TGG - tig0023765:28059-28078 Msa1411410:intron 25.0%
!!! ATATTTTGGATGTGTTTTTC+AGG - tig0023765:28073-28092 Msa1411410:intron 25.0%
! AAAAACCTTATCGAAACAAA+TGG + tig0023765:28121-28140 None:intergenic 25.0%
!!! TAAGGTTTTTGTGTGTTATT+TGG - tig0023765:28131-28150 Msa1411410:intron 25.0%
!!! AAGGTTTTTGTGTGTTATTT+GGG - tig0023765:28132-28151 Msa1411410:intron 25.0%
!! TATAATTGGTGTTTATTCGA+TGG - tig0023765:28195-28214 Msa1411410:CDS 25.0%
!! ATAATTGGTGTTTATTCGAT+GGG - tig0023765:28196-28215 Msa1411410:CDS 25.0%
!!! TGTCAGCTTTATCTATTTTT+TGG - tig0023765:28322-28341 Msa1411410:CDS 25.0%
!!! GTCAGCTTTATCTATTTTTT+GGG - tig0023765:28323-28342 Msa1411410:CDS 25.0%
!!! TCAGCTTTATCTATTTTTTG+GGG - tig0023765:28324-28343 Msa1411410:CDS 25.0%
! TTGAGAACCAAAAATATCTA+CGG + tig0023765:28426-28445 None:intergenic 25.0%
!! CTTGTATATGTTGGTAAATA+TGG - tig0023765:28468-28487 Msa1411410:CDS 25.0%
!!! TCCTTAAAATAATGGGTTTT+TGG - tig0023765:28516-28535 Msa1411410:CDS 25.0%
!!! TCCAAAAACCCATTATTTTA+AGG + tig0023765:28520-28539 None:intergenic 25.0%
! AAACCAAAAGAAATGAAGAA+GGG + tig0023765:28602-28621 None:intergenic 25.0%
! GAAATGTGATATACAATTCT+CGG - tig0023765:28781-28800 Msa1411410:intron 25.0%
! AAATCAAAATAGTCAGTTGA+AGG + tig0023765:28939-28958 None:intergenic 25.0%
! ACCATTTAAAGAAGAAGAAT+GGG - tig0023765:29119-29138 Msa1411410:CDS 25.0%
! TTAATGTAAATTCAGTTGAC+CGG - tig0023765:29163-29182 Msa1411410:CDS 25.0%
! TCAATTTCATCATCAAACAA+CGG + tig0023765:29240-29259 None:intergenic 25.0%
! CAACAACAAAAAAGGAATAA+AGG + tig0023765:29397-29416 None:intergenic 25.0%
!!! TTATTCCTTTTTTGTTGTTG+CGG - tig0023765:29397-29416 Msa1411410:intron 25.0%
! AAAACAGATGATTACATACA+TGG + tig0023765:29448-29467 None:intergenic 25.0%
!! AAACTTTGCAGCTTTTTATA+AGG - tig0023765:29532-29551 Msa1411410:CDS 25.0%
!! AACTTTGCAGCTTTTTATAA+GGG - tig0023765:29533-29552 Msa1411410:CDS 25.0%
!! TGATTTTACTTTCTTCGATT+TGG - tig0023765:30325-30344 Msa1411410:intron 25.0%
! CCAAAAACTATGACAAATTA+GGG + tig0023765:30569-30588 None:intergenic 25.0%
! ACCAAAAACTATGACAAATT+AGG + tig0023765:30570-30589 None:intergenic 25.0%
! TTTGGATTTACATATTCAAG+GGG + tig0023765:30968-30987 None:intergenic 25.0%
! CTTTGGATTTACATATTCAA+GGG + tig0023765:30969-30988 None:intergenic 25.0%
! ACTTTGGATTTACATATTCA+AGG + tig0023765:30970-30989 None:intergenic 25.0%
! TCTCTTCAGAATTAAATGAA+AGG - tig0023765:31020-31039 Msa1411410:five_prime_UTR 25.0%
! TGTTGTAAATATTCAACTCA+AGG - tig0023765:31085-31104 Msa1411410:five_prime_UTR 25.0%
! TAAATATTCAACTCAAGGTA+AGG - tig0023765:31090-31109 Msa1411410:five_prime_UTR 25.0%
!! TCTAGAATTAAAGCTGAATT+TGG + tig0023765:31127-31146 None:intergenic 25.0%
! ATCATTCTTCCTCATTTTGT+AGG - tig0023765:27127-27146 Msa1411410:three_prime_UTR 30.0%
! AAAGGTTTAGGATAGTGTTA+TGG + tig0023765:27189-27208 None:intergenic 30.0%
TATTGTAAGGTGAAAGGTTT+AGG + tig0023765:27201-27220 None:intergenic 30.0%
AGAGTATGAAGGTTATTGTA+AGG + tig0023765:27214-27233 None:intergenic 30.0%
CAAAATATCGAGAGAGAAAA+TGG + tig0023765:27249-27268 None:intergenic 30.0%
! CATTTTCTCTCTCGATATTT+TGG - tig0023765:27247-27266 Msa1411410:three_prime_UTR 30.0%
!! TCGATCCTATTATTTTGTTG+TGG - tig0023765:27325-27344 Msa1411410:three_prime_UTR 30.0%
!! CGATCCTATTATTTTGTTGT+GGG - tig0023765:27326-27345 Msa1411410:three_prime_UTR 30.0%
TGAATCAGTCAATATTGTTG+TGG - tig0023765:27492-27511 Msa1411410:CDS 30.0%
GAATCAGTCAATATTGTTGT+GGG - tig0023765:27493-27512 Msa1411410:CDS 30.0%
! TCAATATTGTTGTGGGTTTT+TGG - tig0023765:27500-27519 Msa1411410:CDS 30.0%
!! GGTTTTGATCGAAAAAGTTT+CGG - tig0023765:27521-27540 Msa1411410:CDS 30.0%
! ATCGAAAAAGTTTCGGTTTT+TGG - tig0023765:27528-27547 Msa1411410:CDS 30.0%
! TGGTGATGTATTATCTGAAA+AGG - tig0023765:27687-27706 Msa1411410:CDS 30.0%
TATCTGAAAAGGAAGATTTG+TGG - tig0023765:27698-27717 Msa1411410:CDS 30.0%
ATCTGAAAAGGAAGATTTGT+GGG - tig0023765:27699-27718 Msa1411410:CDS 30.0%
! ACCTTTTATGTTTTTCCGAT+TGG - tig0023765:27822-27841 Msa1411410:intron 30.0%
ACCAATCGGAAAAACATAAA+AGG + tig0023765:27826-27845 None:intergenic 30.0%
ACAAAATGACAATCACCAAT+CGG + tig0023765:27840-27859 None:intergenic 30.0%
! GTTGGTTATGTTCATGTTTT+TGG - tig0023765:27940-27959 Msa1411410:intron 30.0%
!! ATGGTTATAAGGTGTTGATT+TGG - tig0023765:27972-27991 Msa1411410:intron 30.0%
!! TGGTTATAAGGTGTTGATTT+GGG - tig0023765:27973-27992 Msa1411410:intron 30.0%
! TTACCCTTCTTCATTTCTTT+TGG - tig0023765:28596-28615 Msa1411410:CDS 30.0%
CAAACCAAAAGAAATGAAGA+AGG + tig0023765:28603-28622 None:intergenic 30.0%
! TCTTTTTCTGTCATAGAGAT+AGG - tig0023765:28688-28707 Msa1411410:CDS 30.0%
!! AAGACACTTGTTTTCTATCT+TGG - tig0023765:28819-28838 Msa1411410:intron 30.0%
AAGGTAATACCTTAACATCA+CGG + tig0023765:28920-28939 None:intergenic 30.0%
!! TACAAGGTTTTCAAGAAAAG+TGG - tig0023765:29063-29082 Msa1411410:intron 30.0%
CACCATTTAAAGAAGAAGAA+TGG - tig0023765:29118-29137 Msa1411410:CDS 30.0%
TAATGTAAATTCAGTTGACC+GGG - tig0023765:29164-29183 Msa1411410:CDS 30.0%
!!! TATTCCTTTTTTGTTGTTGC+GGG - tig0023765:29398-29417 Msa1411410:intron 30.0%
GAGATCAAAACTACAAAAAC+AGG + tig0023765:29476-29495 None:intergenic 30.0%
AGAAGAACAATACTACAATC+AGG + tig0023765:29604-29623 None:intergenic 30.0%
TCAGCAACCTATATTATTCA+TGG + tig0023765:29690-29709 None:intergenic 30.0%
TGATGAAGAAACACGAAATA+TGG - tig0023765:29707-29726 Msa1411410:CDS 30.0%
! ATCAAACTGTTGATGAATTC+TGG - tig0023765:30186-30205 Msa1411410:intron 30.0%
!! TTTACTTTCTTCGATTTGGA+TGG - tig0023765:30329-30348 Msa1411410:intron 30.0%
TTCTGCTTAGAAAATGTCAT+AGG - tig0023765:30539-30558 Msa1411410:intron 30.0%
!! CCCTAATTTGTCATAGTTTT+TGG - tig0023765:30566-30585 Msa1411410:intron 30.0%
!!! CATAGTTTTTGGTCATGTTT+AGG - tig0023765:30577-30596 Msa1411410:intron 30.0%
CACATAAAGCAATAAGAATC+GGG + tig0023765:30894-30913 None:intergenic 30.0%
GCACATAAAGCAATAAGAAT+CGG + tig0023765:30895-30914 None:intergenic 30.0%
! GAAATTTAAGACTATTAGGG+AGG - tig0023765:30935-30954 Msa1411410:five_prime_UTR 30.0%
TATCTATAGCAGCAAAACTT+TGG + tig0023765:30986-31005 None:intergenic 30.0%
!! TCAGCTTTAATTCTAGAGTA+AGG - tig0023765:31130-31149 Msa1411410:five_prime_UTR 30.0%
!! CAGCTTTAATTCTAGAGTAA+GGG - tig0023765:31131-31150 Msa1411410:five_prime_UTR 30.0%
! TTGGTCATCTTTTATTCTAC+AGG - tig0023765:31255-31274 Msa1411410:five_prime_UTR 30.0%
! TGGTCATCTTTTATTCTACA+GGG - tig0023765:31256-31275 Msa1411410:five_prime_UTR 30.0%
GATAGTGTTATGGTCAAAGA+AGG + tig0023765:27179-27198 None:intergenic 35.0%
GAAGGTTATTGTAAGGTGAA+AGG + tig0023765:27207-27226 None:intergenic 35.0%
AATAATAGGATCGAACCTCT+GGG + tig0023765:27319-27338 None:intergenic 35.0%
AAATAATAGGATCGAACCTC+TGG + tig0023765:27320-27339 None:intergenic 35.0%
TCGTCAATTCCAACTATCTA+AGG - tig0023765:27467-27486 Msa1411410:CDS 35.0%
TGATTCAAGCCTTAGATAGT+TGG + tig0023765:27479-27498 None:intergenic 35.0%
!!! AAAGTTTCGGTTTTTGGTTC+TGG - tig0023765:27534-27553 Msa1411410:CDS 35.0%
!!! AAGTTTCGGTTTTTGGTTCT+GGG - tig0023765:27535-27554 Msa1411410:CDS 35.0%
! TTTTTGTCTTCTGATCGAGA+TGG - tig0023765:27574-27593 Msa1411410:CDS 35.0%
! TTTTGTCTTCTGATCGAGAT+GGG - tig0023765:27575-27594 Msa1411410:CDS 35.0%
GTTGAAGTTCAACGTTATCA+AGG - tig0023765:27727-27746 Msa1411410:CDS 35.0%
GAAGAGCAAAATCAAATACC+AGG + tig0023765:27788-27807 None:intergenic 35.0%
TGTACAGTACTTAGCAATTC+AGG - tig0023765:28030-28049 Msa1411410:intron 35.0%
GACTTCCATTTGTTTCGATA+AGG - tig0023765:28113-28132 Msa1411410:intron 35.0%
! TTGAGATCTCTTGGTTGATA+TGG - tig0023765:28351-28370 Msa1411410:CDS 35.0%
! GATAGGTCCGTAGATATTTT+TGG - tig0023765:28416-28435 Msa1411410:CDS 35.0%
GATGATCTGCTTGTATATGT+TGG - tig0023765:28459-28478 Msa1411410:CDS 35.0%
GAACAATCTTTCCTGAAAAC+TGG - tig0023765:28651-28670 Msa1411410:CDS 35.0%
!! AGAGATAGGAAGTATCCTAA+CGG - tig0023765:28702-28721 Msa1411410:intron 35.0%
ATATACAATTCTCGGTCAGT+TGG - tig0023765:28789-28808 Msa1411410:intron 35.0%
GGACTATTATGCACTTTACA+AGG - tig0023765:29047-29066 Msa1411410:intron 35.0%
GCCCATTCTTCTTCTTTAAA+TGG + tig0023765:29123-29142 None:intergenic 35.0%
! GCAGCTTTTTATAAGGGTTT+TGG - tig0023765:29539-29558 Msa1411410:CDS 35.0%
!! GCTTTTTATAAGGGTTTTGG+TGG - tig0023765:29542-29561 Msa1411410:CDS 35.0%
!!! CTCTCTTGTTTTCCTTCTAT+TGG - tig0023765:29622-29641 Msa1411410:CDS 35.0%
TATGAGAGAAGACCAATAGA+AGG + tig0023765:29637-29656 None:intergenic 35.0%
AGAAACACGAAATATGGTCA+TGG - tig0023765:29713-29732 Msa1411410:CDS 35.0%
!!! CTAGATTGCTGTTTTTCACT+TGG + tig0023765:29771-29790 None:intergenic 35.0%
TGATGATTGAAGTCAAAGCT+GGG + tig0023765:29816-29835 None:intergenic 35.0%
! TTGATGATTGAAGTCAAAGC+TGG + tig0023765:29817-29836 None:intergenic 35.0%
AAAGAAACATCTCTGCATCT+TGG + tig0023765:30055-30074 None:intergenic 35.0%
CATGCATATATGAATAGCAC+TGG - tig0023765:30110-30129 Msa1411410:intron 35.0%
TCTTTCTCTCTAACAAATCC+AGG - tig0023765:30257-30276 Msa1411410:intron 35.0%
ACAAATCCAGGTATAGTCAT+TGG - tig0023765:30269-30288 Msa1411410:intron 35.0%
!! GTTTTTGAGCCAATTTCAAG+TGG - tig0023765:30513-30532 Msa1411410:intron 35.0%
! TGATTTTCAGTGCTTTCAGT+AGG + tig0023765:30628-30647 None:intergenic 35.0%
!! GGTAGGTATTGAATCAACAA+AGG + tig0023765:30704-30723 None:intergenic 35.0%
CTGAAAATCCCTTGGTAAAT+CGG - tig0023765:30740-30759 Msa1411410:CDS 35.0%
TGAAAATCCCTTGGTAAATC+GGG - tig0023765:30741-30760 Msa1411410:CDS 35.0%
CAATAAGAATCGGGAAGAAA+AGG + tig0023765:30885-30904 None:intergenic 35.0%
TTGCTTTATGTGCTTTCTTG+TGG - tig0023765:30902-30921 Msa1411410:five_prime_UTR 35.0%
TGCTTTATGTGCTTTCTTGT+GGG - tig0023765:30903-30922 Msa1411410:five_prime_UTR 35.0%
TTCAACTCAAGGTAAGGTTT+AGG - tig0023765:31096-31115 Msa1411410:five_prime_UTR 35.0%
TAGTGAGTTTGTGAGCTTGT+TGG + tig0023765:27081-27100 None:intergenic 40.0%
TGGAAGGTTCCTACAAAATG+AGG + tig0023765:27139-27158 None:intergenic 40.0%
AAGAAGGAAGCTAAGGTAAG+TGG + tig0023765:27163-27182 None:intergenic 40.0%
ATGGTCAAAGAAGGAAGCTA+AGG + tig0023765:27170-27189 None:intergenic 40.0%
!!! TTTTTGGTTCTGGGTAATCG+AGG - tig0023765:27544-27563 Msa1411410:CDS 40.0%
!!! TTTTGGTTCTGGGTAATCGA+GGG - tig0023765:27545-27564 Msa1411410:CDS 40.0%
! TTCTGCTGATTGTTTCAGTG+AGG - tig0023765:27616-27635 Msa1411410:CDS 40.0%
AGGAAACTGATGTGTACAAG+TGG - tig0023765:27747-27766 Msa1411410:CDS 40.0%
GGAAACTGATGTGTACAAGT+GGG - tig0023765:27748-27767 Msa1411410:CDS 40.0%
CAAATACCAGGTAAATCCTC+AGG + tig0023765:27776-27795 None:intergenic 40.0%
CAAATGGAAGTCAACTCTTG+AGG + tig0023765:28105-28124 None:intergenic 40.0%
! ATTGGTGTTTATTCGATGGG+TGG - tig0023765:28199-28218 Msa1411410:CDS 40.0%
AACTCGTACAAACAGATTCG+CGG + tig0023765:28227-28246 None:intergenic 40.0%
TGGTGATCAGTCTTACATCT+AGG + tig0023765:28270-28289 None:intergenic 40.0%
AGTTTCCTTCAGTGCATGAT+AGG - tig0023765:28399-28418 Msa1411410:CDS 40.0%
CTTAAGCTCATCTTCATCCA+TGG + tig0023765:28892-28911 None:intergenic 40.0%
TAAGACATGCCGTGATGTTA+AGG - tig0023765:28908-28927 Msa1411410:intron 40.0%
!! GGTTTTCAAGAAAAGTGGAC+CGG - tig0023765:29068-29087 Msa1411410:intron 40.0%
!! GTTTTCAAGAAAAGTGGACC+GGG - tig0023765:29069-29088 Msa1411410:intron 40.0%
CATAACCATTCACATGTTGC+TGG + tig0023765:29305-29324 None:intergenic 40.0%
!! TGGTTATGTTGACTTTCCTC+AGG - tig0023765:29317-29336 Msa1411410:CDS 40.0%
!!! CTTTTTTGTTGTTGCGGGTA+GGG - tig0023765:29403-29422 Msa1411410:intron 40.0%
!!! TTTTTTGTTGTTGCGGGTAG+GGG - tig0023765:29404-29423 Msa1411410:intron 40.0%
CATGGAAAAATGTCTGTCAG+CGG + tig0023765:29672-29691 None:intergenic 40.0%
GGTCATGGATCAATTCTATG+AGG - tig0023765:29728-29747 Msa1411410:CDS 40.0%
ACTTGGATCAGGGAATATCA+TGG + tig0023765:29754-29773 None:intergenic 40.0%
!!! GCTGTTTTTCACTTGGATCA+GGG + tig0023765:29764-29783 None:intergenic 40.0%
!!! TGCTGTTTTTCACTTGGATC+AGG + tig0023765:29765-29784 None:intergenic 40.0%
TCAACACATCTTCAAACTGG+AGG + tig0023765:30016-30035 None:intergenic 40.0%
CACTCAACACATCTTCAAAC+TGG + tig0023765:30019-30038 None:intergenic 40.0%
AACATCTCTGCATCTTGGTA+AGG + tig0023765:30050-30069 None:intergenic 40.0%
GATGCAGAGATGTTTCTTTG+TGG - tig0023765:30056-30075 Msa1411410:intron 40.0%
TTTCTTCGTTAATAGACCCC+AGG + tig0023765:30082-30101 None:intergenic 40.0%
!! TTGATTTGCGTCTTCTGGAT+TGG + tig0023765:30171-30190 None:intergenic 40.0%
!! ACAGTTTGATTTGCGTCTTC+TGG + tig0023765:30176-30195 None:intergenic 40.0%
AAGCTACAATGTTGCTCAAC+TGG - tig0023765:30295-30314 Msa1411410:intron 40.0%
TTCAAAGCCCGATTTACCAA+GGG + tig0023765:30751-30770 None:intergenic 40.0%
ATTCAAAGCCCGATTTACCA+AGG + tig0023765:30752-30771 None:intergenic 40.0%
GCTTTCTTGTGGGTTTCTAT+TGG - tig0023765:30913-30932 Msa1411410:five_prime_UTR 40.0%
! TCTAGAGTAAGGGCTTGTAT+CGG - tig0023765:31141-31160 Msa1411410:five_prime_UTR 40.0%
ACCAAAACTTGATACTACGC+GGG + tig0023765:31240-31259 None:intergenic 40.0%
GACCAAAACTTGATACTACG+CGG + tig0023765:31241-31260 None:intergenic 40.0%
CTAGTCACTACCTCACTCAA+AGG - tig0023765:27098-27117 Msa1411410:three_prime_UTR 45.0%
TGATTCAGTGCCTTTGAGTG+AGG + tig0023765:27111-27130 None:intergenic 45.0%
AGCTAAGGTAAGTGGTTGGA+AGG + tig0023765:27155-27174 None:intergenic 45.0%
AGGAAGCTAAGGTAAGTGGT+TGG + tig0023765:27159-27178 None:intergenic 45.0%
GTTGGATGAAAGCGAAAACC+TGG + tig0023765:27656-27675 None:intergenic 45.0%
TCGCTTTCATCCAACAGATG+AGG - tig0023765:27661-27680 Msa1411410:CDS 45.0%
TCATCCAACAGATGAGGAGT+TGG - tig0023765:27667-27686 Msa1411410:CDS 45.0%
ATCACCAACTCCTCATCTGT+TGG + tig0023765:27674-27693 None:intergenic 45.0%
TGTCAATGAACCCCACAAAG+GGG + tig0023765:28301-28320 None:intergenic 45.0%
GTGTCAATGAACCCCACAAA+GGG + tig0023765:28302-28321 None:intergenic 45.0%
AGTGTCAATGAACCCCACAA+AGG + tig0023765:28303-28322 None:intergenic 45.0%
TGGGGTATGTTGAGATCTCT+TGG - tig0023765:28342-28361 Msa1411410:CDS 45.0%
! CTCTTGGTTGATATGGTCAG+TGG - tig0023765:28358-28377 Msa1411410:CDS 45.0%
CTTTCCTGAAAACTGGAGAC+AGG - tig0023765:28658-28677 Msa1411410:CDS 45.0%
! ATTGCCTGTCTCCAGTTTTC+AGG + tig0023765:28665-28684 None:intergenic 45.0%
TGAAAACTGGAGACAGGCAA+TGG - tig0023765:28664-28683 Msa1411410:CDS 45.0%
!! GATAGGAAGTATCCTAACGG+TGG - tig0023765:28705-28724 Msa1411410:intron 45.0%
TCTAGTCGAGCAACTAGACA+TGG - tig0023765:28732-28751 Msa1411410:intron 45.0%
TAGTGGTGAGCGAACTGATT+GGG - tig0023765:28851-28870 Msa1411410:intron 45.0%
GGTTATGCATGAGTACACCA+TGG - tig0023765:28872-28891 Msa1411410:intron 45.0%
CCATACTGTTCACCGTTCTT+AGG + tig0023765:29096-29115 None:intergenic 45.0%
CCTAAGAACGGTGAACAGTA+TGG - tig0023765:29093-29112 Msa1411410:CDS 45.0%
TGTAAATTCAGTTGACCGGG+AGG - tig0023765:29167-29186 Msa1411410:CDS 45.0%
CATTCACATGTTGCTGGTCA+AGG + tig0023765:29299-29318 None:intergenic 45.0%
CTTGACCAGCAACATGTGAA+TGG - tig0023765:29297-29316 Msa1411410:CDS 45.0%
CCTACCCGCAACAACAAAAA+AGG + tig0023765:29405-29424 None:intergenic 45.0%
!!! CCTTTTTTGTTGTTGCGGGT+AGG - tig0023765:29402-29421 Msa1411410:intron 45.0%
!!! TTTTTGTTGTTGCGGGTAGG+GGG - tig0023765:29405-29424 Msa1411410:intron 45.0%
!! GTGTATTTCTGAAGCACCTG+AGG - tig0023765:29854-29873 Msa1411410:intron 45.0%
TCCACTCCGAACATTCAAAG+CGG - tig0023765:29882-29901 Msa1411410:intron 45.0%
! GAGCTTGTCTTTTACGAGGA+AGG - tig0023765:29909-29928 Msa1411410:intron 45.0%
! CTTTTACGAGGAAGGCTTCT+TGG - tig0023765:29917-29936 Msa1411410:intron 45.0%
AGAGATGTTTCTTTGTGGCC+TGG - tig0023765:30061-30080 Msa1411410:intron 45.0%
GAGATGTTTCTTTGTGGCCT+GGG - tig0023765:30062-30081 Msa1411410:intron 45.0%
AGATGTTTCTTTGTGGCCTG+GGG - tig0023765:30063-30082 Msa1411410:intron 45.0%
! CTTCTGGATTGGACAACAAC+TGG + tig0023765:30160-30179 None:intergenic 45.0%
AGTCCAGCTGAAGGTTATGA+TGG - tig0023765:30233-30252 Msa1411410:intron 45.0%
GAACCATCATAACCTTCAGC+TGG + tig0023765:30239-30258 None:intergenic 45.0%
CTTGTGCCAATGACTATACC+TGG + tig0023765:30278-30297 None:intergenic 45.0%
GAGCTCAGCAGAAATGAGAT+GGG + tig0023765:30367-30386 None:intergenic 45.0%
GCAGAAGAGCCACTTGAAAT+TGG + tig0023765:30525-30544 None:intergenic 45.0%
TAGATTCTCCTCAGCTCTGT+GGG - tig0023765:30678-30697 Msa1411410:CDS 45.0%
ATCAGCTGCTGAAAATCCCT+TGG - tig0023765:30732-30751 Msa1411410:CDS 45.0%
! ATCGAATGTCTAGCTTCAGC+AGG - tig0023765:30770-30789 Msa1411410:CDS 45.0%
! TCGAATGTCTAGCTTCAGCA+GGG - tig0023765:30771-30790 Msa1411410:CDS 45.0%
ACCTGCAGCAATGTTGTTGT+CGG + tig0023765:30812-30831 None:intergenic 45.0%
ACTGCAACTATGAAGAGAGC+AGG - tig0023765:30841-30860 Msa1411410:five_prime_UTR 45.0%
TATGAAGAGAGCAGGCAGAA+AGG - tig0023765:30849-30868 Msa1411410:five_prime_UTR 45.0%
ATGAAGAGAGCAGGCAGAAA+GGG - tig0023765:30850-30869 Msa1411410:five_prime_UTR 45.0%
! TCCCGCGTAGTATCAAGTTT+TGG - tig0023765:31236-31255 Msa1411410:five_prime_UTR 45.0%
GGTACGAGGATTCGAGGATT+AGG + tig0023765:27298-27317 None:intergenic 50.0%
TCTTCTGATCGAGATGGGTG+CGG - tig0023765:27580-27599 Msa1411410:CDS 50.0%
TGTGTACAAGTGGGATCCTG+AGG - tig0023765:27757-27776 Msa1411410:CDS 50.0%
TGGGATCCTGAGGATTTACC+TGG - tig0023765:27767-27786 Msa1411410:CDS 50.0%
AATGAACCCCACAAAGGGGA+GGG + tig0023765:28297-28316 None:intergenic 50.0%
ACGGACCTATCATGCACTGA+AGG + tig0023765:28407-28426 None:intergenic 50.0%
!! GGAAGTATCCTAACGGTGGA+AGG - tig0023765:28709-28728 Msa1411410:intron 50.0%
GAGCAACTAGACATGGCTAC+TGG - tig0023765:28739-28758 Msa1411410:intron 50.0%
CATGGCTACTGGAAAGCTAC+TGG - tig0023765:28750-28769 Msa1411410:intron 50.0%
TATCTTGGCAGAGCTCCTAG+TGG - tig0023765:28834-28853 Msa1411410:intron 50.0%
CAATCAGTTCGCTCACCACT+AGG + tig0023765:28852-28871 None:intergenic 50.0%
CTAGTGGTGAGCGAACTGAT+TGG - tig0023765:28850-28869 Msa1411410:intron 50.0%
TGTTCACCGTTCTTAGGACC+CGG + tig0023765:29090-29109 None:intergenic 50.0%
ACATTGTCAACAGCAGCCTC+TGG + tig0023765:29195-29214 None:intergenic 50.0%
ACATGTTGCTGGTCAAGGAC+AGG + tig0023765:29294-29313 None:intergenic 50.0%
CCACTCCGAACATTCAAAGC+GGG - tig0023765:29883-29902 Msa1411410:intron 50.0%
CACTCCGAACATTCAAAGCG+GGG - tig0023765:29884-29903 Msa1411410:intron 50.0%
! TCCTCCCCGCTTTGAATGTT+CGG + tig0023765:29891-29910 None:intergenic 50.0%
! GGAGGAGCTTGTCTTTTACG+AGG - tig0023765:29905-29924 Msa1411410:intron 50.0%
ATAACCTTCAGCTGGACTGC+GGG + tig0023765:30231-30250 None:intergenic 50.0%
CATAACCTTCAGCTGGACTG+CGG + tig0023765:30232-30251 None:intergenic 50.0%
CGAGCTCAGCAGAAATGAGA+TGG + tig0023765:30368-30387 None:intergenic 50.0%
TCGTCACAGTTTACTGCTCC+TGG - tig0023765:30385-30404 Msa1411410:intron 50.0%
! GGTGTTGTGTGTGACTCTGT+CGG - tig0023765:30598-30617 Msa1411410:intron 50.0%
GTAGATTCTCCTCAGCTCTG+TGG - tig0023765:30677-30696 Msa1411410:CDS 50.0%
! GGATTTTCAGCAGCTGATGC+AGG + tig0023765:30730-30749 None:intergenic 50.0%
GCAGCAATGTTGTTGTCGGT+GGG + tig0023765:30808-30827 None:intergenic 50.0%
TGCAGCAATGTTGTTGTCGG+TGG + tig0023765:30809-30828 None:intergenic 50.0%
ACCGACAACAACATTGCTGC+AGG - tig0023765:30808-30827 Msa1411410:exon 50.0%
TGAAGAGAGCAGGCAGAAAG+GGG - tig0023765:30851-30870 Msa1411410:five_prime_UTR 50.0%
GATCGAGATGGGTGCGGTTT+CGG - tig0023765:27586-27605 Msa1411410:CDS 55.0%
ATGAACCCCACAAAGGGGAG+GGG + tig0023765:28296-28315 None:intergenic 55.0%
CAATGAACCCCACAAAGGGG+AGG + tig0023765:28298-28317 None:intergenic 55.0%
CGACTAGACCTTCCACCGTT+AGG + tig0023765:28720-28739 None:intergenic 55.0%
AGTGGACCGGGTCCTAAGAA+CGG - tig0023765:29081-29100 Msa1411410:CDS 55.0%
TTCGGAGTGGAAGTGACCTC+AGG + tig0023765:29873-29892 None:intergenic 55.0%
! CCCGCTTTGAATGTTCGGAG+TGG + tig0023765:29886-29905 None:intergenic 55.0%
TCCGAACATTCAAAGCGGGG+AGG - tig0023765:29887-29906 Msa1411410:intron 55.0%
GCGCGTGGCAGAAACCTTTA+TGG - tig0023765:30423-30442 Msa1411410:intron 55.0%
AACAAAGGCCCACAGAGCTG+AGG + tig0023765:30689-30708 None:intergenic 55.0%
TTCAGCAGCTGATGCAGGAG+TGG + tig0023765:30725-30744 None:intergenic 55.0%
GAAGAGAGCAGGCAGAAAGG+GGG - tig0023765:30852-30871 Msa1411410:five_prime_UTR 55.0%
CCTCTGGGTACGAGGATTCG+AGG + tig0023765:27304-27323 None:intergenic 60.0%
CCTCGAATCCTCGTACCCAG+AGG - tig0023765:27301-27320 Msa1411410:three_prime_UTR 60.0%
GGATCGAACCTCTGGGTACG+AGG + tig0023765:27312-27331 None:intergenic 60.0%
GAGGTGATGTCGTCGATGCC+AGG - tig0023765:27635-27654 Msa1411410:CDS 60.0%
ACCAGTTCCCCTCCCCTTTG+TGG - tig0023765:28286-28305 Msa1411410:CDS 60.0%
CCAGTTCCCCTCCCCTTTGT+GGG - tig0023765:28287-28306 Msa1411410:CDS 60.0%
CAGTTCCCCTCCCCTTTGTG+GGG - tig0023765:28288-28307 Msa1411410:CDS 60.0%
AGTTGACCGGGAGGTTCCAG+AGG - tig0023765:29176-29195 Msa1411410:CDS 60.0%
CCAGGCAGATCACACACCTG+AGG + tig0023765:29336-29355 None:intergenic 60.0%
CCTCAGGTGTGTGATCTGCC+TGG - tig0023765:29333-29352 Msa1411410:CDS 60.0%
! TTGTTGTTGCGGGTAGGGGG+AGG - tig0023765:29408-29427 Msa1411410:intron 60.0%
AACACCCGCAGTCCAGCTGA+AGG - tig0023765:30224-30243 Msa1411410:intron 60.0%
! CGCAAGTTGGCGTGTCAACC+AGG + tig0023765:30406-30425 None:intergenic 60.0%
TTGACACGCCAACTTGCGCG+TGG - tig0023765:30408-30427 Msa1411410:intron 60.0%
GGTTTCTGCCACGCGCAAGT+TGG + tig0023765:30419-30438 None:intergenic 60.0%
GCAGCTGATGCAGGAGTGGT+AGG + tig0023765:30721-30740 None:intergenic 60.0%
CCCACAAAGGGGAGGGGAAC+TGG + tig0023765:28290-28309 None:intergenic 65.0%
!! CAGCAGCCTCTGGAACCTCC+CGG + tig0023765:29185-29204 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0023765 gene 27076 31339 27076 ID=Msa1411410;Name=Msa1411410
tig0023765 mRNA 27076 31339 27076 ID=Msa1411410-mRNA-1;Parent=Msa1411410;Name=Msa1411410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=517|1|1|1|1|1|5|367|571
tig0023765 exon 27076 27816 27076 ID=Msa1411410-mRNA-1:exon:20115;Parent=Msa1411410-mRNA-1
tig0023765 exon 28137 28713 28137 ID=Msa1411410-mRNA-1:exon:20114;Parent=Msa1411410-mRNA-1
tig0023765 exon 29077 29367 29077 ID=Msa1411410-mRNA-1:exon:20113;Parent=Msa1411410-mRNA-1
tig0023765 exon 29486 29763 29486 ID=Msa1411410-mRNA-1:exon:20112;Parent=Msa1411410-mRNA-1
tig0023765 exon 30627 31339 30627 ID=Msa1411410-mRNA-1:exon:20111;Parent=Msa1411410-mRNA-1
tig0023765 five_prime_UTR 30823 31339 30823 ID=Msa1411410-mRNA-1:five_prime_utr;Parent=Msa1411410-mRNA-1
tig0023765 CDS 30627 30822 30627 ID=Msa1411410-mRNA-1:cds;Parent=Msa1411410-mRNA-1
tig0023765 CDS 29486 29763 29486 ID=Msa1411410-mRNA-1:cds;Parent=Msa1411410-mRNA-1
tig0023765 CDS 29077 29367 29077 ID=Msa1411410-mRNA-1:cds;Parent=Msa1411410-mRNA-1
tig0023765 CDS 28137 28713 28137 ID=Msa1411410-mRNA-1:cds;Parent=Msa1411410-mRNA-1
tig0023765 CDS 27443 27816 27443 ID=Msa1411410-mRNA-1:cds;Parent=Msa1411410-mRNA-1
tig0023765 three_prime_UTR 27076 27442 27076 ID=Msa1411410-mRNA-1:three_prime_utr;Parent=Msa1411410-mRNA-1
Gene Sequence

>Msa1411410

ATGGGTGCGGTTTCGGAATCTGCTTCTGCTGATTGTTTCAGTGAGGTGATGTCGTCGATGCCAGGTTTTCGCTTTCATCCAACAGATGAGGAGTTGGTGATGTATTATCTGAAAAGGAAGATTTGTGGGAAGAAGTTGAAGTTCAACGTTATCAAGGAAACTGATGTGTACAAGTGGGATCCTGAGGATTTACCTGAACAATCTTTCCTGAAAACTGGAGACAGGCAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAACGGTGGAAGGTCTAGTCGAGCAACTAGACATGGCTACTGGAAAGCTACTGGAAAAGATCGAAATGTGATATACAATTCTCGGTCAGTTGGAGTGAAAAAGACACTTGTTTTCTATCTTGGCAGAGCTCCTAGTGGTGAGCGAACTGATTGGGTTATGCATGAGTACACCATGGATGAAGATGAGCTTAAGACATGCCGTGATGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCGGGTCCTAAGAACGGTGAACAGTATGGTGCACCATTTAAAGAAGAAGAATGGGCAGATGACGATGTTGTAGATTTTAATGTAAATTCAGTTGACCGGGAGGTTCCAGAGGCTGCTGTTGACAATGTTATTGATCAGCATCAGCTGCAGCCGTTGTTTGATGATGAAATTGATGAAATCATTAAAGGGATGCTTGATGTTGAGCCTGTCCTTGACCAGCAACATGTGAATGGTTATGTTGACTTTCCTCAGGTTGCTGATGAAGAAACACGAAATATGGTCATGGATCAATTCTATGAGGCCATGATATTCCCTGATCCAAGTGAAAAACAGCAATCTAGCAGTCAGCTTTATGATGCGCAGCCCAGCTTTGACTTCAATCATCAATCAGTTGATTCTCACTTGTGTATTTCTGAAGCACCTGAGGTCACTTCCACTCCGAACATTCAAAGCGGGGAGGAGCTTGTCTTTTACGAGGAAGGCTTCTTGGAAATTAATGATCTCATTGATACCGAATCTACATTTTCAAATACAGATAAGCTTAACAACGATCTCATTGAGAACCTCCAGTTTGAAGATGTGTTGAGTGAATTTGATCCTTACCAAGATGCAGAGATGTTTCTTTGTGGCCTGGGGTCTATTAACGAAGAAACAGTTTCACATGCATATATGAATAGCACTGGCAGCAATATTGAAAATCAGAGTTACCAGTTGTTGTCCAATCCAGAAGACGCAAATCAAACTGTTGATGAATTCTGGATGCATGTTGAAAGAAACACCCGCAGTCCAGCTGAAGGTTATGATGGTTCTTTCTCTCTAACAAATCCAGGTGTTGTGTGTGACTCTGTCGGCTTTCCTACTGAAAGCACTGAAAATCAAAGAAGCACTGTAGAAGATGTTAAAACAAGTAGATTCTCCTCAGCTCTGTGGGCCTTTGTTGATTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATCCCTTGGTAAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCAGGGTGAAGATCAAGCCCACCGACAACAACATTGCTGCAGGTAATAATGACACTGCAACTATGAAGAGAGCAGGCAGAAAGGGGGTCTCATTCCTTTTCTTCCCGATTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATTGGAAATTTAAGACTATTAGGGAGGTGCGTCTCCCCTTGA
Protein sequence

>Msa1411410

MGAVSESASADCFSEVMSSMPGFRFHPTDEELVMYYLKRKICGKKLKFNVIKETDVYKWDPEDLPEQSFLKTGDRQWFFFCHRDRKYPNGGRSSRATRHGYWKATGKDRNVIYNSRSVGVKKTLVFYLGRAPSGERTDWVMHEYTMDEDELKTCRDVKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWADDDVVDFNVNSVDREVPEAAVDNVIDQHQLQPLFDDEIDEIIKGMLDVEPVLDQQHVNGYVDFPQVADEETRNMVMDQFYEAMIFPDPSEKQQSSSQLYDAQPSFDFNHQSVDSHLCISEAPEVTSTPNIQSGEELVFYEEGFLEINDLIDTESTFSNTDKLNNDLIENLQFEDVLSEFDPYQDAEMFLCGLGSINEETVSHAYMNSTGSNIENQSYQLLSNPEDANQTVDEFWMHVERNTRSPAEGYDGSFSLTNPGVVCDSVGFPTESTENQRSTVEDVKTSRFSSALWAFVDSIPTTPASAAENPLVNRALNRMSSFSRVKIKPTDNNIAAGNNDTATMKRAGRKGVSFLFFPILIALCAFLWVSIGNLRLLGRCVSP*