AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026630 MtrunA17_Chr1g0153431 94.708 926 41 2 1 925 1 919 0.0 1697
Msa0026630 MtrunA17_Chr3g0133891 65.535 766 239 6 174 925 193 947 0.0 922
Msa0026630 MtrunA17_Chr8g0369191 47.807 684 291 12 253 922 3 634 1.99e-154 469
Msa0026630 MtrunA17_Chr3g0102681 26.829 697 424 17 256 925 4 641 1.54e-26 116
Msa0026630 MtrunA17_Chr2g0290651 26.446 605 374 17 259 840 7 563 3.60e-22 102
Msa0026630 MtrunA17_Chr4g0013151 32.453 265 173 2 581 844 229 488 9.92e-20 94.4
Msa0026630 MtrunA17_Chr7g0244501 31.086 267 174 6 582 846 177 435 1.19e-19 94.0
Msa0026630 MtrunA17_Chr5g0446731 25.484 671 433 15 279 925 21 648 8.79e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026630 AT2G26570.1 57.687 761 285 13 191 920 51 805 0.0 756
Msa0026630 AT2G26570.2 57.687 761 285 13 191 920 51 805 0.0 756
Msa0026630 AT4G33390.1 57.960 647 247 5 278 920 153 778 0.0 641
Msa0026630 AT5G42880.1 46.211 673 301 8 264 920 121 748 3.00e-157 480
Msa0026630 AT1G45545.1 43.575 716 336 8 215 919 91 749 3.24e-149 459
Msa0026630 AT1G45545.2 43.575 716 336 8 215 919 92 750 3.30e-149 459
Msa0026630 AT5G55860.1 25.610 656 429 15 279 918 20 632 1.13e-14 79.0
Msa0026630 AT1G12150.2 24.248 565 379 12 279 837 19 540 5.32e-11 66.6
Msa0026630 AT1G12150.1 24.248 565 379 12 279 837 19 540 5.32e-11 66.6

Find 167 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTGGTTTACTACATTT+TGG 0.153241 1_1:-50483529 None:intergenic
CTCCATCATCGTCTCCTTCT+TGG 0.165235 1_1:-50482635 None:intergenic
GGGGCATCTGCTAGTGAATT+TGG 0.237130 1_1:-50480812 None:intergenic
GATCTAACGGCTTCATCTTC+TGG 0.244045 1_1:+50481543 Msa0026630:CDS
TTCTGAGGTAAATTACTTAA+AGG 0.258185 1_1:+50482761 Msa0026630:CDS
GGTCATGCAAACAATGAAAA+TGG 0.264151 1_1:+50483629 Msa0026630:CDS
CGGAGAAAAGCCGGTGAAAT+AGG 0.268026 1_1:+50483506 Msa0026630:CDS
GATTGCCACAAAAGAGTCTT+TGG 0.270589 1_1:+50482377 Msa0026630:CDS
TCATGAACTGTTTCTTCTTT+CGG 0.275067 1_1:-50481049 None:intergenic
GCTTCTTTAGTTGATGAAAA+AGG 0.275514 1_1:+50482273 Msa0026630:CDS
AAGGAAGCTGTTTCTAAGTT+TGG 0.278467 1_1:+50481726 Msa0026630:CDS
AAAGCACATCCAACTCATTC+AGG 0.287960 1_1:+50483731 Msa0026630:CDS
TTTCAATTCTTAATCATAAT+AGG 0.296039 1_1:-50480355 None:intergenic
GACGCTTCTTGAAGCTTCTT+TGG 0.305159 1_1:-50482969 None:intergenic
GAGATCAAGATTCTCTCAAT+TGG 0.317442 1_1:+50482460 Msa0026630:CDS
AGCTGAGTTAAATGCCTATA+TGG 0.326058 1_1:+50482599 Msa0026630:CDS
TACCACTATGATTTATGTTC+TGG 0.328707 1_1:-50483544 None:intergenic
TGCCGTTGCAATTCTCGAAT+TGG 0.338661 1_1:-50483297 None:intergenic
TTTATCATCTAGTGAGTTGA+TGG 0.341644 1_1:-50480894 None:intergenic
AGCAGTTGAGTCGGCCAAAA+AGG 0.354376 1_1:+50482701 Msa0026630:CDS
ATCACTAACATGTACAAGTA+TGG 0.361225 1_1:-50483849 None:intergenic
AAGGCAAGGGAAGGAAAATT+AGG 0.367717 1_1:+50483440 Msa0026630:CDS
GTTTGACTTTGATTCCATAT+AGG 0.370779 1_1:-50482613 None:intergenic
AAAATTGTATGAGGAGATTC+CGG 0.387705 1_1:+50481945 Msa0026630:CDS
TGTGTATAGCCATTGAATTT+CGG 0.387944 1_1:+50483990 Msa0026630:three_prime_UTR
GCTTCAACTGTTACTGTTAA+CGG 0.395660 1_1:+50481145 Msa0026630:CDS
TTGCCTTGCTTGATGCTCTT+CGG 0.398129 1_1:-50482082 None:intergenic
GGCACTCGTATACCTTGCTT+TGG 0.399846 1_1:-50482196 None:intergenic
GAATTGAAAGCTTGCAGAAA+GGG 0.400309 1_1:+50480369 Msa0026630:five_prime_UTR
CGATGCAGCAACAGCATCTT+CGG 0.403753 1_1:-50482313 None:intergenic
CTTCGGTTTGTGCCCTCTCT+AGG 0.404658 1_1:-50482065 None:intergenic
ATCTGCACATTCTGCACATA+TGG 0.405198 1_1:+50482401 Msa0026630:CDS
TTCGATGGAAGAGTCATTAT+CGG 0.407175 1_1:-50480867 None:intergenic
ATGCATATAAACAACCTTTA+GGG 0.408601 1_1:-50481234 None:intergenic
GTTGATATGTCTCCTGTTGC+AGG 0.411948 1_1:-50480326 None:intergenic
GGTTGGAGCTGTTATTATAT+CGG 0.413352 1_1:-50480846 None:intergenic
AGCGTCTGAAGAGGCGAATA+TGG 0.414635 1_1:+50482986 Msa0026630:CDS
GCTTCTGATGAACAATCTAT+AGG 0.415441 1_1:+50480986 Msa0026630:CDS
GGCTGCCACACTGGAATCTT+CGG 0.417044 1_1:-50482154 None:intergenic
ACAAAGAAATAGTTGCTAGA+AGG 0.418428 1_1:+50483384 Msa0026630:CDS
AATCTGTAACCACAGGTTCC+TGG 0.423293 1_1:-50481440 None:intergenic
GATAGTATCACACCAGTTGA+TGG 0.430045 1_1:-50483221 None:intergenic
TTGTCTTCAACTTCCTCCAT+TGG 0.430502 1_1:-50480764 None:intergenic
CGAGCTGAACAAAACTAAAT+CGG 0.430709 1_1:+50482890 Msa0026630:CDS
GGCAACCTCGAGTTGCGCCT+TGG 0.433398 1_1:-50482175 None:intergenic
TGGAGTCTCAAAGGAGCAAC+TGG 0.446933 1_1:+50482653 Msa0026630:CDS
CGATGTTGATCATAATCATA+TGG 0.453913 1_1:+50481168 Msa0026630:CDS
TAGATTACTTGCAGCTCAAA+AGG 0.454559 1_1:+50483100 Msa0026630:CDS
TTACAGAAGCCGAAATTCAA+TGG 0.458957 1_1:-50483999 None:intergenic
TAAAGCTTCAAGTTCAGAAT+CGG 0.460892 1_1:-50481104 None:intergenic
TAGAGCAAGAATTAAGAAAG+TGG 0.463769 1_1:+50483465 Msa0026630:CDS
TCAACATTTCTTGAGGAGGT+TGG 0.463850 1_1:-50480788 None:intergenic
CAAAGAAATAGTTGCTAGAA+GGG 0.465795 1_1:+50483385 Msa0026630:CDS
TTGCGCCTTGGCTGCCACAC+TGG 0.466144 1_1:-50482163 None:intergenic
TTATATCGGTATTCTCTTGA+GGG 0.466758 1_1:-50480832 None:intergenic
CACCAATGTTAACTCTGTAA+TGG 0.467246 1_1:-50482217 None:intergenic
AAGAAAATTGCTGAAAATAG+AGG 0.467267 1_1:+50481669 Msa0026630:CDS
ATTATATCGGTATTCTCTTG+AGG 0.468187 1_1:-50480833 None:intergenic
GAAGCTGTTTCTAAGTTTGG+AGG 0.479133 1_1:+50481729 Msa0026630:CDS
TGCAAGAGCTTCTGAAAGGT+TGG 0.484392 1_1:+50483133 Msa0026630:CDS
GAGAAGCTTGTGAAGTGCTT+AGG 0.488597 1_1:+50483024 Msa0026630:CDS
GCATCAATAACTTCGGTTTG+AGG 0.490058 1_1:-50481357 None:intergenic
TGAAGTGCTTAGGAGAGTAA+AGG 0.495073 1_1:+50483034 Msa0026630:CDS
AATCGGCAGCTATGGCTCCT+AGG 0.499690 1_1:-50481087 None:intergenic
CATTGTACTAGCACCAGCCT+TGG 0.500187 1_1:-50483072 None:intergenic
GAAGCTTCTTTGGCAGCTCA+AGG 0.501880 1_1:-50482959 None:intergenic
GGACTTGAAAAGTAATGTAC+AGG 0.501997 1_1:-50483596 None:intergenic
TGATAATCACATGGATCTAA+CGG 0.503541 1_1:+50481530 Msa0026630:CDS
GGAATTAAGTTCATCACCCT+TGG 0.504644 1_1:+50483926 Msa0026630:three_prime_UTR
AGATCAAGATTCTCTCAATT+GGG 0.505960 1_1:+50482461 Msa0026630:CDS
AAAGCTCAGAGTGGAAGAAA+TGG 0.509731 1_1:+50482119 Msa0026630:CDS
ATGAGGAGATTCCGGAGTAC+AGG 0.512213 1_1:+50481953 Msa0026630:CDS
AATCATCGCTTGCCTCGATT+AGG 0.512741 1_1:+50482823 Msa0026630:CDS
AATGAAGTGGATCCATCAAC+TGG 0.513929 1_1:+50483209 Msa0026630:CDS
AACTTCAGCATCTGAGGTTG+AGG 0.515980 1_1:-50481397 None:intergenic
AAGTTCAGAATCGGCAGCTA+TGG 0.516741 1_1:-50481095 None:intergenic
AGTGCTTAGGAGAGTAAAGG+AGG 0.520512 1_1:+50483037 Msa0026630:CDS
GAAGCAGAAGAACACAGAAT+AGG 0.520706 1_1:+50482423 Msa0026630:CDS
AGAACATACCCTGATTAAGC+AGG 0.522764 1_1:-50479925 None:intergenic
AGATTCCAGTGTGGCAGCCA+AGG 0.524007 1_1:+50482158 Msa0026630:CDS
TGAGTTGATGGAAGCTTCGA+TGG 0.525513 1_1:-50480882 None:intergenic
ACATCAGGAATCTTGATTTG+AGG 0.528054 1_1:-50481612 None:intergenic
TGGATAAATCTGAGAAGGCA+AGG 0.529566 1_1:+50483426 Msa0026630:CDS
TGTTCAGAATCTGTAACCAC+AGG 0.530763 1_1:-50481447 None:intergenic
TGGAGGAATTGTCGATTGGA+AGG 0.530992 1_1:+50481746 Msa0026630:CDS
AACTTCATTCAACTTCTCCA+TGG 0.531531 1_1:-50483360 None:intergenic
GAATTATCACAAAGAACTAA+AGG 0.535060 1_1:+50481581 Msa0026630:CDS
CATGGACAACGGAGAAAAGC+CGG 0.537596 1_1:+50483497 Msa0026630:CDS
ACACTTCCATCAGCAACATC+AGG 0.542110 1_1:-50481627 None:intergenic
GGAATCATTGAAGATTGCTA+TGG 0.544639 1_1:+50483406 Msa0026630:CDS
TTGAGCAGCATCAATAACTT+CGG 0.545249 1_1:-50481364 None:intergenic
TCCTCACCGGATGTGAAAAG+TGG 0.546596 1_1:+50483653 Msa0026630:CDS
TGTCAAGCTCCTGAAGTACT+TGG 0.546825 1_1:-50482008 None:intergenic
ATGGAAGAGTCATTATCGGT+TGG 0.547014 1_1:-50480863 None:intergenic
AGAATTGAAAGCTTGCAGAA+AGG 0.548483 1_1:+50480368 Msa0026630:five_prime_UTR
AACCAAGAAGGAGACGATGA+TGG 0.552427 1_1:+50482633 Msa0026630:CDS
CAACTCTTCTGTTACAGAAG+AGG 0.555295 1_1:-50481203 None:intergenic
GTTTGCATGACCATAAGACT+TGG 0.556311 1_1:-50483618 None:intergenic
AAGCACATCCAACTCATTCA+GGG 0.559299 1_1:+50483732 Msa0026630:CDS
AGTTTGGAGGAATTGTCGAT+TGG 0.559426 1_1:+50481742 Msa0026630:CDS
GAAGCAGAACAAGCCAAGGC+TGG 0.560630 1_1:+50483059 Msa0026630:CDS
TGGTTCAACATTTCTTGAGG+AGG 0.561487 1_1:-50480792 None:intergenic
TGATATTGTGAACATGCATA+AGG 0.563041 1_1:+50481482 Msa0026630:CDS
TTCTGAGATCGATATAGCTA+AGG 0.564068 1_1:+50483322 Msa0026630:CDS
TGAGGTAAATTACTTAAAGG+TGG 0.567020 1_1:+50482764 Msa0026630:CDS
AACTCGAGGTTGCCAAAGCA+AGG 0.569107 1_1:+50482184 Msa0026630:CDS
GGAGACTGAATTGAAAACCA+TGG 0.569236 1_1:+50483343 Msa0026630:CDS
AAGATTCCTGATGTTGCTGA+TGG 0.570955 1_1:+50481621 Msa0026630:CDS
AAGATTCTCTCAATTGGGAG+AGG 0.572141 1_1:+50482466 Msa0026630:CDS
GCTTTAGAAGCTATACAAGA+TGG 0.572583 1_1:+50481121 Msa0026630:CDS
GATTAGGCAAAGAGAGGGAA+TGG 0.573233 1_1:+50482839 Msa0026630:CDS
GCTTCAAGAAGCGTCTGAAG+AGG 0.573977 1_1:+50482977 Msa0026630:CDS
AACTAAAACTGAGCCTAGAG+AGG 0.574371 1_1:+50482052 Msa0026630:CDS
AACCAGAACATAAATCATAG+TGG 0.575238 1_1:+50483542 Msa0026630:CDS
CGAGTTAGATTCGTTGCGTG+TGG 0.575491 1_1:+50482245 Msa0026630:CDS
ATTTGGTTCAACATTTCTTG+AGG 0.575747 1_1:-50480795 None:intergenic
TACATGAACTTCAGCATCTG+AGG 0.576726 1_1:-50481403 None:intergenic
TGCTATGGATAAATCTGAGA+AGG 0.581662 1_1:+50483421 Msa0026630:CDS
GGCAGCCAAGGCGCAACTCG+AGG 0.584945 1_1:+50482170 Msa0026630:CDS
GAATCAAAGTCAAACCAAGA+AGG 0.585631 1_1:+50482621 Msa0026630:CDS
TATATCGGTATTCTCTTGAG+GGG 0.586081 1_1:-50480831 None:intergenic
TTTGCATGACCATAAGACTT+GGG 0.589944 1_1:-50483617 None:intergenic
ATCAACTGGTGTGATACTAT+CGG 0.591383 1_1:+50483223 Msa0026630:CDS
CAATGAAAATGGATCCTCAC+CGG 0.594662 1_1:+50483640 Msa0026630:CDS
AGCTTCTCGAGCAAGCAAGT+TGG 0.594786 1_1:-50483009 None:intergenic
AAACCGAAGAGCATCAAGCA+AGG 0.595409 1_1:+50482079 Msa0026630:CDS
AGTGACTACCCTGAATGAGT+TGG 0.597230 1_1:-50483740 None:intergenic
AGACGATGATGGAGTCTCAA+AGG 0.598841 1_1:+50482644 Msa0026630:CDS
GGATAAATCTGAGAAGGCAA+GGG 0.599722 1_1:+50483427 Msa0026630:CDS
TCCCTCTCTTTGCCTAATCG+AGG 0.600136 1_1:-50482835 None:intergenic
AGCTCCATTCGAATCTGTCA+AGG 0.606757 1_1:+50481707 Msa0026630:CDS
AGATTCTCTCAATTGGGAGA+GGG 0.608093 1_1:+50482467 Msa0026630:CDS
AGAAAGTGGAGAGCAGAACA+TGG 0.609255 1_1:+50483479 Msa0026630:CDS
GCCTCGATTAGGCAAAGAGA+GGG 0.612208 1_1:+50482834 Msa0026630:CDS
GGAGGAAGCAGAACAAGCCA+AGG 0.613105 1_1:+50483055 Msa0026630:CDS
TATTTGATTTCAGCGAAGCA+AGG 0.615921 1_1:+50481903 Msa0026630:intron
AGCCAATTCGAGAATTGCAA+CGG 0.618494 1_1:+50483295 Msa0026630:CDS
ATCGAAGCAAGTGGAAAAGA+CGG 0.619879 1_1:+50482332 Msa0026630:CDS
TCCGGAGTACAGGAAAAGAT+CGG 0.623837 1_1:+50481963 Msa0026630:CDS
GAGTTGCAGATTGACCCTAA+AGG 0.624207 1_1:+50481220 Msa0026630:CDS
GCTTCCTTGACAGATTCGAA+TGG 0.625828 1_1:-50481711 None:intergenic
AAATCTGAGAAGGCAAGGGA+AGG 0.626732 1_1:+50483431 Msa0026630:CDS
AAGCTGCAAGAGCTTCTGAA+AGG 0.629129 1_1:+50483129 Msa0026630:CDS
CATAGAGAAAGCTACTTCTG+AGG 0.629665 1_1:+50482746 Msa0026630:CDS
TGCCATTACAGAGTTAACAT+TGG 0.633979 1_1:+50482215 Msa0026630:CDS
TAGAAGCAACAACAATGAAG+TGG 0.641955 1_1:+50483196 Msa0026630:CDS
AATGCAAGCAGCAGTTGAGT+CGG 0.646409 1_1:+50482692 Msa0026630:CDS
ACACAGAATAGGAACAGTCA+TGG 0.648205 1_1:+50482434 Msa0026630:CDS
TGCCTCGATTAGGCAAAGAG+AGG 0.654005 1_1:+50482833 Msa0026630:CDS
TGTAACAGAACAAAGTCACC+AGG 0.655246 1_1:+50481422 Msa0026630:CDS
AGAACTTGCAAAGCTCAGAG+TGG 0.657807 1_1:+50482110 Msa0026630:CDS
GATAGACGCAACTGTAATCG+AGG 0.658612 1_1:-50482862 None:intergenic
ACAAAGTCACCAGGAACCTG+TGG 0.660157 1_1:+50481431 Msa0026630:CDS
CGGCAGCTATGGCTCCTAGG+TGG 0.667123 1_1:-50481084 None:intergenic
ACTAAAACTGAGCCTAGAGA+GGG 0.671828 1_1:+50482053 Msa0026630:CDS
AGAGTGGAAGAAATGGAGCA+AGG 0.675194 1_1:+50482126 Msa0026630:CDS
GTGAACATGCATAAGGATGG+TGG 0.677588 1_1:+50481489 Msa0026630:CDS
TTGATATGTCTCCTGTTGCA+GGG 0.678520 1_1:-50480325 None:intergenic
ATTGTGAACATGCATAAGGA+TGG 0.682817 1_1:+50481486 Msa0026630:CDS
TGTTGCTGCATCGAAGCAAG+TGG 0.684932 1_1:+50482323 Msa0026630:CDS
AAGATTGAGATATACCTCGA+CGG 0.686708 1_1:-50481784 None:intergenic
GAAACAGAAGAAAACCACCT+AGG 0.696012 1_1:+50481070 Msa0026630:CDS
TCATCGAATGATAGCCGTCG+AGG 0.697705 1_1:+50481770 Msa0026630:CDS
AGCATTGCAAGAGAGCGAGT+CGG 0.699995 1_1:+50483172 Msa0026630:CDS
GGAGAGCAGAACATGGACAA+CGG 0.701482 1_1:+50483486 Msa0026630:CDS
GGAGTACAGGAAAAGATCGG+AGG 0.701685 1_1:+50481966 Msa0026630:CDS
TATTGCCGAAGATTCCAGTG+TGG 0.782850 1_1:+50482149 Msa0026630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAAATAACAAAAGT+AGG - chr1_1:50479959-50479978 None:intergenic 15.0%
!!! TGATATAATTATTTCTCATA+TGG + chr1_1:50480176-50480195 Msa0026630:intron 15.0%
!! TTTCAATTCTTAATCATAAT+AGG - chr1_1:50480358-50480377 None:intergenic 15.0%
!!! GAATATATCTGAATTATTTT+AGG + chr1_1:50480397-50480416 Msa0026630:five_prime_UTR 15.0%
!! AAAAAATGAAGCAAAAAACT+TGG - chr1_1:50480018-50480037 None:intergenic 20.0%
!!! ATTATGAATTTTTTGCAACA+TGG - chr1_1:50480090-50480109 None:intergenic 20.0%
!! TATTATAGCCAAAAAAATTC+TGG + chr1_1:50480110-50480129 Msa0026630:intron 20.0%
!! TAATAATTCTCTAGCAAATT+TGG + chr1_1:50480201-50480220 Msa0026630:intron 20.0%
!!! GAGTTTAGTCAATTTTTATA+TGG - chr1_1:50480287-50480306 None:intergenic 20.0%
!! AGAATAATGACATATACAAT+AGG - chr1_1:50480482-50480501 None:intergenic 20.0%
!! AAACTAAAATTACTATCACT+AGG - chr1_1:50480538-50480557 None:intergenic 20.0%
!! GTGATTATCAAAAAAACTAT+CGG - chr1_1:50481520-50481539 None:intergenic 20.0%
!!! TAGTTTTTTTGATAATCACA+TGG + chr1_1:50481521-50481540 Msa0026630:CDS 20.0%
!!! TCAAAAAATTTTGTTTGCTA+AGG + chr1_1:50482527-50482546 Msa0026630:CDS 20.0%
!!! TTTGCAAACCAGAATTTTTT+TGG - chr1_1:50480121-50480140 None:intergenic 25.0%
! CAATTTGAATATGTATGCAT+AGG + chr1_1:50480558-50480577 Msa0026630:intron 25.0%
!! CTCAATTTCTTTTTAACCAA+TGG + chr1_1:50480748-50480767 Msa0026630:exon 25.0%
!! AATTTCTTTTTAACCAATGG+AGG + chr1_1:50480751-50480770 Msa0026630:exon 25.0%
! ATGCATATAAACAACCTTTA+GGG - chr1_1:50481237-50481256 None:intergenic 25.0%
! GAATTATCACAAAGAACTAA+AGG + chr1_1:50481581-50481600 Msa0026630:CDS 25.0%
! AAGAAAATTGCTGAAAATAG+AGG + chr1_1:50481669-50481688 Msa0026630:CDS 25.0%
! TGAAACAATCGAAATTGAAA+CGG - chr1_1:50481879-50481898 None:intergenic 25.0%
!!! TTCTGAGGTAAATTACTTAA+AGG + chr1_1:50482761-50482780 Msa0026630:CDS 25.0%
!! AAAAATCACATAGTGGAAAT+TGG - chr1_1:50483898-50483917 None:intergenic 25.0%
! AATTTTCTTCCTGCTTAATC+AGG + chr1_1:50479916-50479935 Msa0026630:five_prime_UTR 30.0%
! ATTTTCTTCCTGCTTAATCA+GGG + chr1_1:50479917-50479936 Msa0026630:five_prime_UTR 30.0%
!! AAATTCTGGTTTGCAAAGTT+TGG + chr1_1:50480124-50480143 Msa0026630:intron 30.0%
GTTTATGAAATTGCTTCTTC+TGG + chr1_1:50480447-50480466 Msa0026630:intron 30.0%
! ACTTGCCTTTTAGATACTTT+TGG + chr1_1:50480721-50480740 Msa0026630:intron 30.0%
! ATTTGGTTCAACATTTCTTG+AGG - chr1_1:50480798-50480817 None:intergenic 30.0%
TTATATCGGTATTCTCTTGA+GGG - chr1_1:50480835-50480854 None:intergenic 30.0%
ATTATATCGGTATTCTCTTG+AGG - chr1_1:50480836-50480855 None:intergenic 30.0%
! TTTATCATCTAGTGAGTTGA+TGG - chr1_1:50480897-50480916 None:intergenic 30.0%
! TCATGAACTGTTTCTTCTTT+CGG - chr1_1:50481052-50481071 None:intergenic 30.0%
! TAAAGCTTCAAGTTCAGAAT+CGG - chr1_1:50481107-50481126 None:intergenic 30.0%
CGATGTTGATCATAATCATA+TGG + chr1_1:50481168-50481187 Msa0026630:CDS 30.0%
CATGCATATAAACAACCTTT+AGG - chr1_1:50481238-50481257 None:intergenic 30.0%
TGATATTGTGAACATGCATA+AGG + chr1_1:50481482-50481501 Msa0026630:CDS 30.0%
TGATAATCACATGGATCTAA+CGG + chr1_1:50481530-50481549 Msa0026630:CDS 30.0%
! GCAATTTTCTTCTCATTTGT+AGG - chr1_1:50481660-50481679 None:intergenic 30.0%
CATGAAGAAGTTAAGTATTC+AGG - chr1_1:50481838-50481857 None:intergenic 30.0%
ACAGCTTGAAAAATTGTATG+AGG + chr1_1:50481936-50481955 Msa0026630:CDS 30.0%
AAAATTGTATGAGGAGATTC+CGG + chr1_1:50481945-50481964 Msa0026630:CDS 30.0%
!! TACTTGGACTTTTTCTTGTT+CGG - chr1_1:50481995-50482014 None:intergenic 30.0%
!! GCTTCTTTAGTTGATGAAAA+AGG + chr1_1:50482273-50482292 Msa0026630:CDS 30.0%
AGATCAAGATTCTCTCAATT+GGG + chr1_1:50482461-50482480 Msa0026630:CDS 30.0%
! GTTTGACTTTGATTCCATAT+AGG - chr1_1:50482616-50482635 None:intergenic 30.0%
!! TACTTCTTCAAGTTCCTTTT+TGG - chr1_1:50482718-50482737 None:intergenic 30.0%
TGAGGTAAATTACTTAAAGG+TGG + chr1_1:50482764-50482783 Msa0026630:CDS 30.0%
!! TATTGCTTTTGTTCAGATGA+AGG + chr1_1:50482914-50482933 Msa0026630:CDS 30.0%
ACAAAGAAATAGTTGCTAGA+AGG + chr1_1:50483384-50483403 Msa0026630:CDS 30.0%
CAAAGAAATAGTTGCTAGAA+GGG + chr1_1:50483385-50483404 Msa0026630:CDS 30.0%
TAGAGCAAGAATTAAGAAAG+TGG + chr1_1:50483465-50483484 Msa0026630:CDS 30.0%
!!! TGTTCTGGTTTACTACATTT+TGG - chr1_1:50483532-50483551 None:intergenic 30.0%
AACCAGAACATAAATCATAG+TGG + chr1_1:50483542-50483561 Msa0026630:CDS 30.0%
TACCACTATGATTTATGTTC+TGG - chr1_1:50483547-50483566 None:intergenic 30.0%
ATCACTAACATGTACAAGTA+TGG - chr1_1:50483852-50483871 None:intergenic 30.0%
! TGATTTTGCAGTATTGTGAA+TGG + chr1_1:50483868-50483887 Msa0026630:three_prime_UTR 30.0%
! TTTCCACTATGTGATTTTTG+AGG + chr1_1:50483899-50483918 Msa0026630:three_prime_UTR 30.0%
! TTTTGTTCTTTTCTCACCAA+GGG - chr1_1:50483945-50483964 None:intergenic 30.0%
! TTTTTGTTCTTTTCTCACCA+AGG - chr1_1:50483946-50483965 None:intergenic 30.0%
! CCTTGAAAAAAGAAGCACAA+AGG - chr1_1:50479993-50480012 None:intergenic 35.0%
!!! CCTTTGTGCTTCTTTTTTCA+AGG + chr1_1:50479990-50480009 Msa0026630:intron 35.0%
AGAATTGAAAGCTTGCAGAA+AGG + chr1_1:50480368-50480387 Msa0026630:five_prime_UTR 35.0%
GAATTGAAAGCTTGCAGAAA+GGG + chr1_1:50480369-50480388 Msa0026630:five_prime_UTR 35.0%
!! GAGTGCCAAAAGTATCTAAA+AGG - chr1_1:50480729-50480748 None:intergenic 35.0%
TATATCGGTATTCTCTTGAG+GGG - chr1_1:50480834-50480853 None:intergenic 35.0%
GGTTGGAGCTGTTATTATAT+CGG - chr1_1:50480849-50480868 None:intergenic 35.0%
TTCGATGGAAGAGTCATTAT+CGG - chr1_1:50480870-50480889 None:intergenic 35.0%
GCTTCTGATGAACAATCTAT+AGG + chr1_1:50480986-50481005 Msa0026630:CDS 35.0%
!! GCTTTAGAAGCTATACAAGA+TGG + chr1_1:50481121-50481140 Msa0026630:CDS 35.0%
GCTTCAACTGTTACTGTTAA+CGG + chr1_1:50481145-50481164 Msa0026630:CDS 35.0%
TTGAGCAGCATCAATAACTT+CGG - chr1_1:50481367-50481386 None:intergenic 35.0%
ATTGTGAACATGCATAAGGA+TGG + chr1_1:50481486-50481505 Msa0026630:CDS 35.0%
! ACATCAGGAATCTTGATTTG+AGG - chr1_1:50481615-50481634 None:intergenic 35.0%
!! AAGGAAGCTGTTTCTAAGTT+TGG + chr1_1:50481726-50481745 Msa0026630:CDS 35.0%
AAGATTGAGATATACCTCGA+CGG - chr1_1:50481787-50481806 None:intergenic 35.0%
TTTGAGCAAAACACAGAGAA+AGG - chr1_1:50481811-50481830 None:intergenic 35.0%
! TATTTGATTTCAGCGAAGCA+AGG + chr1_1:50481903-50481922 Msa0026630:intron 35.0%
AGAAAAAGTCCAAGTACTTC+AGG + chr1_1:50481999-50482018 Msa0026630:CDS 35.0%
TGCCATTACAGAGTTAACAT+TGG + chr1_1:50482215-50482234 Msa0026630:CDS 35.0%
CACCAATGTTAACTCTGTAA+TGG - chr1_1:50482220-50482239 None:intergenic 35.0%
! AGATTCCAAAGACTCTTTTG+TGG - chr1_1:50482385-50482404 None:intergenic 35.0%
GAGATCAAGATTCTCTCAAT+TGG + chr1_1:50482460-50482479 Msa0026630:CDS 35.0%
AGCTGAGTTAAATGCCTATA+TGG + chr1_1:50482599-50482618 Msa0026630:CDS 35.0%
GAATCAAAGTCAAACCAAGA+AGG + chr1_1:50482621-50482640 Msa0026630:CDS 35.0%
CGAGCTGAACAAAACTAAAT+CGG + chr1_1:50482890-50482909 Msa0026630:CDS 35.0%
GTTCAGATGAAGGAAAAAGA+AGG + chr1_1:50482924-50482943 Msa0026630:CDS 35.0%
TAGATTACTTGCAGCTCAAA+AGG + chr1_1:50483100-50483119 Msa0026630:CDS 35.0%
TAGAAGCAACAACAATGAAG+TGG + chr1_1:50483196-50483215 Msa0026630:CDS 35.0%
ATCAACTGGTGTGATACTAT+CGG + chr1_1:50483223-50483242 Msa0026630:CDS 35.0%
!! TTCTGAGATCGATATAGCTA+AGG + chr1_1:50483322-50483341 Msa0026630:CDS 35.0%
AACTTCATTCAACTTCTCCA+TGG - chr1_1:50483363-50483382 None:intergenic 35.0%
GGAATCATTGAAGATTGCTA+TGG + chr1_1:50483406-50483425 Msa0026630:CDS 35.0%
TGCTATGGATAAATCTGAGA+AGG + chr1_1:50483421-50483440 Msa0026630:CDS 35.0%
!! TACATTTTGGCCTATTTCAC+CGG - chr1_1:50483519-50483538 None:intergenic 35.0%
GGACTTGAAAAGTAATGTAC+AGG - chr1_1:50483599-50483618 None:intergenic 35.0%
!!! TTTTCAAGTCCCAAGTCTTA+TGG + chr1_1:50483608-50483627 Msa0026630:CDS 35.0%
TTTGCATGACCATAAGACTT+GGG - chr1_1:50483620-50483639 None:intergenic 35.0%
GGTCATGCAAACAATGAAAA+TGG + chr1_1:50483629-50483648 Msa0026630:CDS 35.0%
!! TTCTTTCCACTTTTCACATC+CGG - chr1_1:50483662-50483681 None:intergenic 35.0%
GCAAAGAACATAAAAAGTCG+TGG - chr1_1:50483704-50483723 None:intergenic 35.0%
TGTCCTCAAAAATCACATAG+TGG - chr1_1:50483905-50483924 None:intergenic 35.0%
!! CTATGTGATTTTTGAGGACA+TGG + chr1_1:50483905-50483924 Msa0026630:three_prime_UTR 35.0%
AGAACATACCCTGATTAAGC+AGG - chr1_1:50479928-50479947 None:intergenic 40.0%
TGTTGCAGGGAAAATTCTTC+AGG - chr1_1:50480315-50480334 None:intergenic 40.0%
! TGAAGAATTTTCCCTGCAAC+AGG + chr1_1:50480314-50480333 Msa0026630:intron 40.0%
TTGATATGTCTCCTGTTGCA+GGG - chr1_1:50480328-50480347 None:intergenic 40.0%
TTGTCTTCAACTTCCTCCAT+TGG - chr1_1:50480767-50480786 None:intergenic 40.0%
TCAACATTTCTTGAGGAGGT+TGG - chr1_1:50480791-50480810 None:intergenic 40.0%
TGGTTCAACATTTCTTGAGG+AGG - chr1_1:50480795-50480814 None:intergenic 40.0%
ATGGAAGAGTCATTATCGGT+TGG - chr1_1:50480866-50480885 None:intergenic 40.0%
GAAACAGAAGAAAACCACCT+AGG + chr1_1:50481070-50481089 Msa0026630:CDS 40.0%
CAACTCTTCTGTTACAGAAG+AGG - chr1_1:50481206-50481225 None:intergenic 40.0%
! GCATCAATAACTTCGGTTTG+AGG - chr1_1:50481360-50481379 None:intergenic 40.0%
TACATGAACTTCAGCATCTG+AGG - chr1_1:50481406-50481425 None:intergenic 40.0%
TGTAACAGAACAAAGTCACC+AGG + chr1_1:50481422-50481441 Msa0026630:CDS 40.0%
TGTTCAGAATCTGTAACCAC+AGG - chr1_1:50481450-50481469 None:intergenic 40.0%
AAGATTCCTGATGTTGCTGA+TGG + chr1_1:50481621-50481640 Msa0026630:CDS 40.0%
!! GAAGCTGTTTCTAAGTTTGG+AGG + chr1_1:50481729-50481748 Msa0026630:CDS 40.0%
AGTTTGGAGGAATTGTCGAT+TGG + chr1_1:50481742-50481761 Msa0026630:CDS 40.0%
AACTAAAACTGAGCCTAGAG+AGG + chr1_1:50482052-50482071 Msa0026630:CDS 40.0%
ACTAAAACTGAGCCTAGAGA+GGG + chr1_1:50482053-50482072 Msa0026630:CDS 40.0%
AAAGCTCAGAGTGGAAGAAA+TGG + chr1_1:50482119-50482138 Msa0026630:CDS 40.0%
ATCGAAGCAAGTGGAAAAGA+CGG + chr1_1:50482332-50482351 Msa0026630:CDS 40.0%
GATTGCCACAAAAGAGTCTT+TGG + chr1_1:50482377-50482396 Msa0026630:CDS 40.0%
ATCTGCACATTCTGCACATA+TGG + chr1_1:50482401-50482420 Msa0026630:CDS 40.0%
GAAGCAGAAGAACACAGAAT+AGG + chr1_1:50482423-50482442 Msa0026630:CDS 40.0%
ACACAGAATAGGAACAGTCA+TGG + chr1_1:50482434-50482453 Msa0026630:CDS 40.0%
AAGATTCTCTCAATTGGGAG+AGG + chr1_1:50482466-50482485 Msa0026630:CDS 40.0%
AGATTCTCTCAATTGGGAGA+GGG + chr1_1:50482467-50482486 Msa0026630:CDS 40.0%
CATAGAGAAAGCTACTTCTG+AGG + chr1_1:50482746-50482765 Msa0026630:CDS 40.0%
! TGAAGTGCTTAGGAGAGTAA+AGG + chr1_1:50483034-50483053 Msa0026630:CDS 40.0%
AATGAAGTGGATCCATCAAC+TGG + chr1_1:50483209-50483228 Msa0026630:CDS 40.0%
GATAGTATCACACCAGTTGA+TGG - chr1_1:50483224-50483243 None:intergenic 40.0%
AGCCAATTCGAGAATTGCAA+CGG + chr1_1:50483295-50483314 Msa0026630:CDS 40.0%
GGAGACTGAATTGAAAACCA+TGG + chr1_1:50483343-50483362 Msa0026630:CDS 40.0%
TGGATAAATCTGAGAAGGCA+AGG + chr1_1:50483426-50483445 Msa0026630:CDS 40.0%
GGATAAATCTGAGAAGGCAA+GGG + chr1_1:50483427-50483446 Msa0026630:CDS 40.0%
AAGGCAAGGGAAGGAAAATT+AGG + chr1_1:50483440-50483459 Msa0026630:CDS 40.0%
GTTTGCATGACCATAAGACT+TGG - chr1_1:50483621-50483640 None:intergenic 40.0%
CAATGAAAATGGATCCTCAC+CGG + chr1_1:50483640-50483659 Msa0026630:CDS 40.0%
AAAGCACATCCAACTCATTC+AGG + chr1_1:50483731-50483750 Msa0026630:CDS 40.0%
AAGCACATCCAACTCATTCA+GGG + chr1_1:50483732-50483751 Msa0026630:CDS 40.0%
GGAATTAAGTTCATCACCCT+TGG + chr1_1:50483926-50483945 Msa0026630:three_prime_UTR 40.0%
GACATGCAAAGAGTGGACAA+GGG - chr1_1:50480068-50480087 None:intergenic 45.0%
CAACATGGACATGCAAAGAG+TGG - chr1_1:50480075-50480094 None:intergenic 45.0%
GTTGATATGTCTCCTGTTGC+AGG - chr1_1:50480329-50480348 None:intergenic 45.0%
!! TGAGTTGATGGAAGCTTCGA+TGG - chr1_1:50480885-50480904 None:intergenic 45.0%
AAGTTCAGAATCGGCAGCTA+TGG - chr1_1:50481098-50481117 None:intergenic 45.0%
GAGTTGCAGATTGACCCTAA+AGG + chr1_1:50481220-50481239 Msa0026630:CDS 45.0%
! AACTTCAGCATCTGAGGTTG+AGG - chr1_1:50481400-50481419 None:intergenic 45.0%
AATCTGTAACCACAGGTTCC+TGG - chr1_1:50481443-50481462 None:intergenic 45.0%
GTGAACATGCATAAGGATGG+TGG + chr1_1:50481489-50481508 Msa0026630:CDS 45.0%
GATCTAACGGCTTCATCTTC+TGG + chr1_1:50481543-50481562 Msa0026630:CDS 45.0%
ACACTTCCATCAGCAACATC+AGG - chr1_1:50481630-50481649 None:intergenic 45.0%
AGCTCCATTCGAATCTGTCA+AGG + chr1_1:50481707-50481726 Msa0026630:CDS 45.0%
GCTTCCTTGACAGATTCGAA+TGG - chr1_1:50481714-50481733 None:intergenic 45.0%
! TGGAGGAATTGTCGATTGGA+AGG + chr1_1:50481746-50481765 Msa0026630:CDS 45.0%
TCCGGAGTACAGGAAAAGAT+CGG + chr1_1:50481963-50481982 Msa0026630:CDS 45.0%
! TCCGATCTTTTCCTGTACTC+CGG - chr1_1:50481967-50481986 None:intergenic 45.0%
! TGTCAAGCTCCTGAAGTACT+TGG - chr1_1:50482011-50482030 None:intergenic 45.0%
!! AAACCGAAGAGCATCAAGCA+AGG + chr1_1:50482079-50482098 Msa0026630:CDS 45.0%
TTGCCTTGCTTGATGCTCTT+CGG - chr1_1:50482085-50482104 None:intergenic 45.0%
AGAACTTGCAAAGCTCAGAG+TGG + chr1_1:50482110-50482129 Msa0026630:CDS 45.0%
AGAGTGGAAGAAATGGAGCA+AGG + chr1_1:50482126-50482145 Msa0026630:CDS 45.0%
TATTGCCGAAGATTCCAGTG+TGG + chr1_1:50482149-50482168 Msa0026630:CDS 45.0%
AACCAAGAAGGAGACGATGA+TGG + chr1_1:50482633-50482652 Msa0026630:CDS 45.0%
!! AGACGATGATGGAGTCTCAA+AGG + chr1_1:50482644-50482663 Msa0026630:CDS 45.0%
AATGCAAGCAGCAGTTGAGT+CGG + chr1_1:50482692-50482711 Msa0026630:CDS 45.0%
AATCATCGCTTGCCTCGATT+AGG + chr1_1:50482823-50482842 Msa0026630:CDS 45.0%
GATTAGGCAAAGAGAGGGAA+TGG + chr1_1:50482839-50482858 Msa0026630:CDS 45.0%
GATAGACGCAACTGTAATCG+AGG - chr1_1:50482865-50482884 None:intergenic 45.0%
GACGCTTCTTGAAGCTTCTT+TGG - chr1_1:50482972-50482991 None:intergenic 45.0%
! GAGAAGCTTGTGAAGTGCTT+AGG + chr1_1:50483024-50483043 Msa0026630:CDS 45.0%
AGTGCTTAGGAGAGTAAAGG+AGG + chr1_1:50483037-50483056 Msa0026630:CDS 45.0%
AAGCTGCAAGAGCTTCTGAA+AGG + chr1_1:50483129-50483148 Msa0026630:CDS 45.0%
! TGCAAGAGCTTCTGAAAGGT+TGG + chr1_1:50483133-50483152 Msa0026630:CDS 45.0%
TGCCGTTGCAATTCTCGAAT+TGG - chr1_1:50483300-50483319 None:intergenic 45.0%
AAATCTGAGAAGGCAAGGGA+AGG + chr1_1:50483431-50483450 Msa0026630:CDS 45.0%
AGAAAGTGGAGAGCAGAACA+TGG + chr1_1:50483479-50483498 Msa0026630:CDS 45.0%
AGTGACTACCCTGAATGAGT+TGG - chr1_1:50483743-50483762 None:intergenic 45.0%
TGCAAAGAGTGGACAAGGGA+AGG - chr1_1:50480064-50480083 None:intergenic 50.0%
GGACATGCAAAGAGTGGACA+AGG - chr1_1:50480069-50480088 None:intergenic 50.0%
! GGGGCATCTGCTAGTGAATT+TGG - chr1_1:50480815-50480834 None:intergenic 50.0%
ACAAAGTCACCAGGAACCTG+TGG + chr1_1:50481431-50481450 Msa0026630:CDS 50.0%
TCATCGAATGATAGCCGTCG+AGG + chr1_1:50481770-50481789 Msa0026630:CDS 50.0%
ATGAGGAGATTCCGGAGTAC+AGG + chr1_1:50481953-50481972 Msa0026630:CDS 50.0%
GGAGTACAGGAAAAGATCGG+AGG + chr1_1:50481966-50481985 Msa0026630:CDS 50.0%
AACTCGAGGTTGCCAAAGCA+AGG + chr1_1:50482184-50482203 Msa0026630:CDS 50.0%
GGCACTCGTATACCTTGCTT+TGG - chr1_1:50482199-50482218 None:intergenic 50.0%
CGAGTTAGATTCGTTGCGTG+TGG + chr1_1:50482245-50482264 Msa0026630:CDS 50.0%
CGATGCAGCAACAGCATCTT+CGG - chr1_1:50482316-50482335 None:intergenic 50.0%
TGTTGCTGCATCGAAGCAAG+TGG + chr1_1:50482323-50482342 Msa0026630:CDS 50.0%
CTCCATCATCGTCTCCTTCT+TGG - chr1_1:50482638-50482657 None:intergenic 50.0%
TGGAGTCTCAAAGGAGCAAC+TGG + chr1_1:50482653-50482672 Msa0026630:CDS 50.0%
AGCAGTTGAGTCGGCCAAAA+AGG + chr1_1:50482701-50482720 Msa0026630:CDS 50.0%
TGCCTCGATTAGGCAAAGAG+AGG + chr1_1:50482833-50482852 Msa0026630:CDS 50.0%
GCCTCGATTAGGCAAAGAGA+GGG + chr1_1:50482834-50482853 Msa0026630:CDS 50.0%
TCCCTCTCTTTGCCTAATCG+AGG - chr1_1:50482838-50482857 None:intergenic 50.0%
GAAGCTTCTTTGGCAGCTCA+AGG - chr1_1:50482962-50482981 None:intergenic 50.0%
!! GCTTCAAGAAGCGTCTGAAG+AGG + chr1_1:50482977-50482996 Msa0026630:CDS 50.0%
AGCGTCTGAAGAGGCGAATA+TGG + chr1_1:50482986-50483005 Msa0026630:CDS 50.0%
AGCTTCTCGAGCAAGCAAGT+TGG - chr1_1:50483012-50483031 None:intergenic 50.0%
CATTGTACTAGCACCAGCCT+TGG - chr1_1:50483075-50483094 None:intergenic 50.0%
AGCATTGCAAGAGAGCGAGT+CGG + chr1_1:50483172-50483191 Msa0026630:CDS 50.0%
GGAGAGCAGAACATGGACAA+CGG + chr1_1:50483486-50483505 Msa0026630:CDS 50.0%
CATGGACAACGGAGAAAAGC+CGG + chr1_1:50483497-50483516 Msa0026630:CDS 50.0%
CGGAGAAAAGCCGGTGAAAT+AGG + chr1_1:50483506-50483525 Msa0026630:CDS 50.0%
TCCTCACCGGATGTGAAAAG+TGG + chr1_1:50483653-50483672 Msa0026630:CDS 50.0%
!! TCCACTTTTCACATCCGGTG+AGG - chr1_1:50483657-50483676 None:intergenic 50.0%
AATCGGCAGCTATGGCTCCT+AGG - chr1_1:50481090-50481109 None:intergenic 55.0%
! CTTCGGTTTGTGCCCTCTCT+AGG - chr1_1:50482068-50482087 None:intergenic 55.0%
GGCTGCCACACTGGAATCTT+CGG - chr1_1:50482157-50482176 None:intergenic 55.0%
AGATTCCAGTGTGGCAGCCA+AGG + chr1_1:50482158-50482177 Msa0026630:CDS 55.0%
GGAGGAAGCAGAACAAGCCA+AGG + chr1_1:50483055-50483074 Msa0026630:CDS 55.0%
GAAGCAGAACAAGCCAAGGC+TGG + chr1_1:50483059-50483078 Msa0026630:CDS 55.0%
CGGCAGCTATGGCTCCTAGG+TGG - chr1_1:50481087-50481106 None:intergenic 65.0%
TTGCGCCTTGGCTGCCACAC+TGG - chr1_1:50482166-50482185 None:intergenic 65.0%
! GGCAACCTCGAGTTGCGCCT+TGG - chr1_1:50482178-50482197 None:intergenic 65.0%
GGCAGCCAAGGCGCAACTCG+AGG + chr1_1:50482170-50482189 Msa0026630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 50479874 50484012 50479874 ID=Msa0026630;Name=Msa0026630
chr1_1 mRNA 50479874 50484012 50479874 ID=Msa0026630-mRNA-1;Parent=Msa0026630;Name=Msa0026630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=198|0.75|0.8|1|0.5|0.4|5|255|925
chr1_1 exon 50479874 50479938 50479874 ID=Msa0026630-mRNA-1:exon:14634;Parent=Msa0026630-mRNA-1
chr1_1 exon 50480319 50480418 50480319 ID=Msa0026630-mRNA-1:exon:14635;Parent=Msa0026630-mRNA-1
chr1_1 exon 50480734 50481241 50480734 ID=Msa0026630-mRNA-1:exon:14636;Parent=Msa0026630-mRNA-1
chr1_1 exon 50481331 50481791 50481331 ID=Msa0026630-mRNA-1:exon:14637;Parent=Msa0026630-mRNA-1
chr1_1 exon 50481916 50484012 50481916 ID=Msa0026630-mRNA-1:exon:14638;Parent=Msa0026630-mRNA-1
chr1_1 five_prime_UTR 50479874 50479938 50479874 ID=Msa0026630-mRNA-1:five_prime_utr;Parent=Msa0026630-mRNA-1
chr1_1 five_prime_UTR 50480319 50480418 50480319 ID=Msa0026630-mRNA-1:five_prime_utr;Parent=Msa0026630-mRNA-1
chr1_1 five_prime_UTR 50480734 50480766 50480734 ID=Msa0026630-mRNA-1:five_prime_utr;Parent=Msa0026630-mRNA-1
chr1_1 CDS 50480767 50481241 50480767 ID=Msa0026630-mRNA-1:cds;Parent=Msa0026630-mRNA-1
chr1_1 CDS 50481331 50481791 50481331 ID=Msa0026630-mRNA-1:cds;Parent=Msa0026630-mRNA-1
chr1_1 CDS 50481916 50483757 50481916 ID=Msa0026630-mRNA-1:cds;Parent=Msa0026630-mRNA-1
chr1_1 three_prime_UTR 50483758 50484012 50483758 ID=Msa0026630-mRNA-1:three_prime_utr;Parent=Msa0026630-mRNA-1
Gene Sequence

>Msa0026630

ATGGAGGAAGTTGAAGACAAACCAACCTCCTCAAGAAATGTTGAACCAAATTCACTAGCAGATGCCCCTCAAGAGAATACCGATATAATAACAGCTCCAACCGATAATGACTCTTCCATCGAAGCTTCCATCAACTCACTAGATGATAAAAATATATTAGAACATGACACACATTTTCAAGAGACTAATTTCTCTGAAATAGAATCAAAGTCAACGCGTGCTTCTGATGAACAATCTATAGGACAAGATGAACATCTTCTCACAGATGATTCAACTTCTACACCGAAAGAAGAAACAGTTCATGAAACAGAAGAAAACCACCTAGGAGCCATAGCTGCCGATTCTGAACTTGAAGCTTTAGAAGCTATACAAGATGGTGCTTCAACTGTTACTGTTAACGGCGATGTTGATCATAATCATATGGAACTCTCAACATCCTCTTCTGTAACAGAAGAGTTGCAGATTGACCCTAAAGTTATTGAATTAGTTCTAACAGATCGTCCTCAAACCGAAGTTATTGATGCTGCTCAAGAAAATTTAGCCTCAACCTCAGATGCTGAAGTTCATGTAACAGAACAAAGTCACCAGGAACCTGTGGTTACAGATTCTGAACAAGAATCTTTAGATGATATTGTGAACATGCATAAGGATGGTGGTTTTACCGATAGTTTTTTTGATAATCACATGGATCTAACGGCTTCATCTTCTGGAACAGAAGAGTTTCAGAATTATCACAAAGAACTAAAGGTAAATCTGCCTCAAATCAAGATTCCTGATGTTGCTGATGGAAGTGTCGACTCACCTACAAATGAGAAGAAAATTGCTGAAAATAGAGGCATAGTTGATACAGCAGCTCCATTCGAATCTGTCAAGGAAGCTGTTTCTAAGTTTGGAGGAATTGTCGATTGGAAGGCTCATCGAATGATAGCCGTCGAGCGAAGCAAGGAAGTAGAACAACAGCTTGAAAAATTGTATGAGGAGATTCCGGAGTACAGGAAAAGATCGGAGGACTCCGAACAAGAAAAAGTCCAAGTACTTCAGGAGCTTGACAGCACTAAGAGACTAATAGAAGAACTAAAACTGAGCCTAGAGAGGGCACAAACCGAAGAGCATCAAGCAAGGCAAGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAAATGGAGCAAGGTATTGCCGAAGATTCCAGTGTGGCAGCCAAGGCGCAACTCGAGGTTGCCAAAGCAAGGTATACGAGTGCCATTACAGAGTTAACATTGGTGAAACACGAGTTAGATTCGTTGCGTGTGGAATACGCTTCTTTAGTTGATGAAAAAGGCGAAGCTATTAACAAAGCCGAAGATGCTGTTGCTGCATCGAAGCAAGTGGAAAAGACGGTTGAAGATTTGACTATTGAGTTGATTGCCACAAAAGAGTCTTTGGAATCTGCACATTCTGCACATATGGAAGCAGAAGAACACAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCAATTGGGAGAGGGAACTTAAACAAGAAGAACAAGAACTAGAAAAACTCAATCAAAAAATTTTGTTTGCTAAGGATCTTAAATCTAAACATAGTAAAGCTTCTGCATTGCTTCTTGATTTGAAAGCTGAGTTAAATGCCTATATGGAATCAAAGTCAAACCAAGAAGGAGACGATGATGGAGTCTCAAAGGAGCAACTGGACAAGTCACATATTGAAATGCAAGCAGCAGTTGAGTCGGCCAAAAAGGAACTTGAAGAAGTAAAGCTTAGCATAGAGAAAGCTACTTCTGAGGTAAATTACTTAAAGGTGGCTGCAACATCATTAAGATCAGAACTCGAACAAGAGAAATCATCGCTTGCCTCGATTAGGCAAAGAGAGGGAATGGCCTCGATTACAGTTGCGTCTATCGAAGTCGAGCTGAACAAAACTAAATCGGATATTGCTTTTGTTCAGATGAAGGAAAAAGAAGGCAAAGAGACAATCCTTGAGCTGCCAAAGAAGCTTCAAGAAGCGTCTGAAGAGGCGAATATGGCCAACTTGCTTGCTCGAGAAGCTTGTGAAGTGCTTAGGAGAGTAAAGGAGGAAGCAGAACAAGCCAAGGCTGGTGCTAGTACAATGCATAGTAGATTACTTGCAGCTCAAAAGGAGATAGAAGCTGCAAGAGCTTCTGAAAGGTTGGCAATACAAGCAATTAAAGCATTGCAAGAGAGCGAGTCGGCTAGAAGCAACAACAATGAAGTGGATCCATCAACTGGTGTGATACTATCGGTTGAAGAGTATTATCGTATAACGAAACAAGTTCATGATGCAGAAGAAAGAGCCAATTCGAGAATTGCAACGGCAAATTCTGAGATCGATATAGCTAAGGAGACTGAATTGAAAACCATGGAGAAGTTGAATGAAGTTAACAAAGAAATAGTTGCTAGAAGGGAATCATTGAAGATTGCTATGGATAAATCTGAGAAGGCAAGGGAAGGAAAATTAGGTGTAGAGCAAGAATTAAGAAAGTGGAGAGCAGAACATGGACAACGGAGAAAAGCCGGTGAAATAGGCCAAAATGTAGTAAACCAGAACATAAATCATAGTGGTAAACTTGATCAAAATCATAGTGAGACTATTCCTGTACATTACTTTTCAAGTCCCAAGTCTTATGGTCATGCAAACAATGAAAATGGATCCTCACCGGATGTGAAAAGTGGAAAGAAGAAGAAAAAGTCGTTGTTTCCACGACTTTTTATGTTCTTTGCAAGAAGAAAAGCACATCCAACTCATTCAGGGTAG
Protein sequence

>Msa0026630

MEEVEDKPTSSRNVEPNSLADAPQENTDIITAPTDNDSSIEASINSLDDKNILEHDTHFQETNFSEIESKSTRASDEQSIGQDEHLLTDDSTSTPKEETVHETEENHLGAIAADSELEALEAIQDGASTVTVNGDVDHNHMELSTSSSVTEELQIDPKVIELVLTDRPQTEVIDAAQENLASTSDAEVHVTEQSHQEPVVTDSEQESLDDIVNMHKDGGFTDSFFDNHMDLTASSSGTEEFQNYHKELKVNLPQIKIPDVADGSVDSPTNEKKIAENRGIVDTAAPFESVKEAVSKFGGIVDWKAHRMIAVERSKEVEQQLEKLYEEIPEYRKRSEDSEQEKVQVLQELDSTKRLIEELKLSLERAQTEEHQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTSAITELTLVKHELDSLRVEYASLVDEKGEAINKAEDAVAASKQVEKTVEDLTIELIATKESLESAHSAHMEAEEHRIGTVMARDQDSLNWERELKQEEQELEKLNQKILFAKDLKSKHSKASALLLDLKAELNAYMESKSNQEGDDDGVSKEQLDKSHIEMQAAVESAKKELEEVKLSIEKATSEVNYLKVAATSLRSELEQEKSSLASIRQREGMASITVASIEVELNKTKSDIAFVQMKEKEGKETILELPKKLQEASEEANMANLLAREACEVLRRVKEEAEQAKAGASTMHSRLLAAQKEIEAARASERLAIQAIKALQESESARSNNNEVDPSTGVILSVEEYYRITKQVHDAEERANSRIATANSEIDIAKETELKTMEKLNEVNKEIVARRESLKIAMDKSEKAREGKLGVEQELRKWRAEHGQRRKAGEIGQNVVNQNINHSGKLDQNHSETIPVHYFSSPKSYGHANNENGSSPDVKSGKKKKKSLFPRLFMFFARRKAHPTHSG*