AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0764920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0764920 MtrunA17_Chr5g0415541 95.868 484 19 1 1 483 1 484 0.0 964
Msa0764920 MtrunA17_Chr8g0363721 57.617 512 175 9 1 483 1 499 0.0 570
Msa0764920 MtrunA17_Chr6g0452681 52.090 311 110 6 203 477 1 308 1.01e-86 270
Msa0764920 MtrunA17_Chr6g0452681 47.682 151 74 3 1 149 1 148 2.28e-36 137
Msa0764920 MtrunA17_Chr2g0280871 56.771 192 77 2 203 394 1 186 3.08e-68 219
Msa0764920 MtrunA17_Chr2g0280871 47.020 151 73 3 1 149 1 146 1.16e-36 135
Msa0764920 MtrunA17_Chr8g0363091 67.105 76 25 0 384 459 14 89 5.17e-28 108
Msa0764920 MtrunA17_Chr8g0362891 65.333 75 26 0 384 458 14 88 4.02e-27 104
Msa0764920 MtrunA17_Chr2g0280861 53.191 94 42 2 384 477 4 95 1.48e-25 101
Msa0764920 MtrunA17_Chr8g0363181 55.556 90 29 2 304 387 11 95 4.16e-23 94.4
Msa0764920 MtrunA17_Chr8g0363011 74.000 50 9 1 279 328 2 47 1.15e-18 81.6
Msa0764920 MtrunA17_Chr8g0362901 69.048 42 13 0 252 293 8 49 8.21e-15 69.3
Msa0764920 MtrunA17_Chr8g0363101 69.048 42 13 0 252 293 8 49 8.21e-15 69.3
Msa0764920 MtrunA17_Chr8g0363171 61.111 54 21 0 383 436 13 66 2.03e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0764920 AT1G27100.1 49.237 524 221 11 1 484 1 519 1.88e-155 454
Msa0764920 AT1G59710.2 61.565 294 100 4 203 483 1 294 2.97e-116 347
Msa0764920 AT1G59710.2 47.682 151 73 3 1 149 1 147 1.24e-34 133
Msa0764920 AT1G59710.1 61.775 293 99 4 203 482 1 293 5.96e-116 345
Msa0764920 AT1G59710.1 47.682 151 73 3 1 149 1 147 1.46e-34 132
Msa0764920 AT3G28630.1 56.291 302 112 5 200 483 30 329 9.60e-104 315
Msa0764920 AT3G28630.1 45.638 149 74 3 1 147 33 176 1.44e-33 130
Msa0764920 AT3G28630.2 57.095 296 105 4 200 483 30 315 3.02e-103 313
Msa0764920 AT3G28630.2 45.638 149 74 3 1 147 33 176 1.24e-33 130
Msa0764920 AT1G69890.1 55.914 279 115 3 203 477 1 275 4.59e-101 306
Msa0764920 AT1G69890.1 42.282 149 81 3 1 149 1 144 1.93e-31 123
Msa0764920 AT3G01311.2 52.650 283 111 6 203 481 1 264 2.28e-94 289
Msa0764920 AT3G01311.2 42.162 185 89 7 1 173 1 179 2.51e-30 120
Msa0764920 AT3G01311.1 52.650 283 111 6 203 481 1 264 2.80e-94 290
Msa0764920 AT3G01311.1 42.162 185 89 7 1 173 1 179 4.60e-30 119
Msa0764920 AT1G69900.1 43.229 384 170 9 1 339 1 381 2.51e-83 265
Msa0764920 AT1G69900.1 53.333 150 68 2 203 350 1 150 6.45e-45 163
Msa0764920 AT1G59710.3 74.497 149 38 0 203 351 1 149 3.04e-78 245
Msa0764920 AT1G59710.3 47.682 151 73 3 1 149 1 147 1.51e-35 132

Find 141 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCCTGTTAGGGTTAA+GGG 0.195743 5_2:-25387468 None:intergenic
TGATGATTCGTTTGTGAAAA+TGG 0.200746 5_2:+25387641 Msa0764920:CDS
TCAGAACAACCAAATATTTC+AGG 0.214237 5_2:-25394688 None:intergenic
ACCTGCATAGTAACATTATT+TGG 0.217790 5_2:-25394201 None:intergenic
GCCAATACGTGACGGGTTTC+AGG 0.220129 5_2:+25387542 Msa0764920:CDS
CGGATAACGTTGTCGTAGTT+TGG 0.238101 5_2:-25392904 None:intergenic
ATATTACCCTCTTTCCTGTT+AGG 0.251409 5_2:-25387476 None:intergenic
AGTTATATGTTAAAATATTT+AGG 0.251479 5_2:+25394921 Msa0764920:CDS
GAGAGTTTGTTATCTTCTTT+TGG 0.254540 5_2:+25387708 Msa0764920:CDS
CCTCTTTCCTGTTAGGGTTA+AGG 0.264638 5_2:-25387469 None:intergenic
ACAGAAGAATCCAAAGTCTT+TGG 0.280690 5_2:-25393015 None:intergenic
TGTTACTATGCAGGTTGTTT+TGG 0.304622 5_2:+25394209 Msa0764920:CDS
GCATTGTGCCCTGAAATATT+TGG 0.320427 5_2:+25394679 Msa0764920:intron
ACACGAACACCATCCCTTAC+AGG 0.328669 5_2:-25393048 None:intergenic
TGAGGAAGAGACAGGGTTAG+AGG 0.334303 5_2:+25394113 Msa0764920:CDS
GAGCTTAATGATCTTTGATT+TGG 0.335600 5_2:-25387259 None:intergenic
CGTTGTTGTCGTCGGCGATA+AGG 0.350621 5_2:-25387302 None:intergenic
CTTTGGATTCTTCTGTTGAA+TGG 0.351344 5_2:+25393022 Msa0764920:CDS
AGGCCATGTGTTGCAAAATC+TGG 0.354532 5_2:-25394864 None:intergenic
CTGTTGAATGGGAGCCTGTA+AGG 0.358269 5_2:+25393034 Msa0764920:CDS
TGGCTCCGTTTCGGCTTTGA+CGG 0.367449 5_2:-25387332 None:intergenic
GTGGGATGTTGAAGGTGTTA+TGG 0.369271 5_2:+25387674 Msa0764920:CDS
AAACTCATAACCAAGTAATA+AGG 0.369988 5_2:+25387397 Msa0764920:CDS
CTATAGTATCAAACCATTCA+TGG 0.370387 5_2:+25387227 Msa0764920:exon
CTCACTTGGGTCGTCGCCGC+CGG 0.370649 5_2:+25387782 Msa0764920:CDS
CCGTATCCCTTAACCCTAAC+AGG 0.371672 5_2:+25387462 Msa0764920:CDS
AGGTGTGCAGGGATATTCTT+TGG 0.376870 5_2:+25394050 Msa0764920:CDS
CCAGTCATGCCGAGAAGAAA+TGG 0.382127 5_2:-25392970 None:intergenic
TTGGTTCTTCCTTTCTCAAA+AGG 0.382208 5_2:+25394228 Msa0764920:CDS
GACTCTTTAACCTTATTACT+TGG 0.389023 5_2:-25387407 None:intergenic
CATTCCGCTTCGAAGCTTGT+TGG 0.389295 5_2:-25392743 None:intergenic
TATTACCCTCTTTCCTGTTA+GGG 0.391440 5_2:-25387475 None:intergenic
TCAAACTAGTCCAAAGACTT+TGG 0.393826 5_2:+25393005 Msa0764920:CDS
TCAGACACTCCATTTCTTCT+CGG 0.411678 5_2:+25392961 Msa0764920:CDS
AGGCTTCAAGATTGTTCTCT+AGG 0.413432 5_2:+25395089 Msa0764920:three_prime_UTR
ATTCCGCTTCGAAGCTTGTT+GGG 0.414117 5_2:-25392742 None:intergenic
GCTTGAAATTGCCATGGAAA+TGG 0.416966 5_2:+25395023 Msa0764920:three_prime_UTR
TCCAAATAATGTTACTATGC+AGG 0.419922 5_2:+25394200 Msa0764920:CDS
TTTGGATTCTTCTGTTGAAT+GGG 0.421483 5_2:+25393023 Msa0764920:CDS
GGATAACGTTGTCGTAGTTT+GGG 0.426618 5_2:-25392903 None:intergenic
TAGGACTGTTACTCAGGATT+GGG 0.427974 5_2:+25393158 Msa0764920:CDS
TCCGCATAGGACTGTTACTC+AGG 0.434544 5_2:+25393152 Msa0764920:CDS
CCTGTTAGGGTTAAGGGATA+CGG 0.444235 5_2:-25387462 None:intergenic
ACCTGAAACCCGTCACGTAT+TGG 0.446082 5_2:-25387543 None:intergenic
AGTGAGTGATGAAGGTGTGC+AGG 0.455263 5_2:+25394038 Msa0764920:CDS
GAGTTAGAAAACGGTGTAGA+TGG 0.456733 5_2:+25387504 Msa0764920:CDS
CCATTTCTTCTCGGCATGAC+TGG 0.457330 5_2:+25392970 Msa0764920:CDS
ACCGTTTCTTCCTTGTGAAA+CGG 0.465755 5_2:-25392845 None:intergenic
GGAATTGAGCAAGAAGATTG+AGG 0.467306 5_2:+25394095 Msa0764920:CDS
TTATTGTGTGTTGTGTGTGT+TGG 0.469349 5_2:-25387140 None:intergenic
GTGAAGCTGAAGACGAGGTA+TGG 0.469674 5_2:+25393069 Msa0764920:CDS
AAGAAGATTGAGGAAGAGAC+AGG 0.469690 5_2:+25394105 Msa0764920:CDS
AGGAAAGAGGGTAATATTAA+CGG 0.470116 5_2:+25387482 Msa0764920:CDS
ATAGGACTGTTACTCAGGAT+TGG 0.472028 5_2:+25393157 Msa0764920:CDS
GGAGGAGCAACCGCCACAGC+AGG 0.472105 5_2:-25393264 None:intergenic
GGCATGCTAGTTTCAAAAGC+TGG 0.477841 5_2:-25393237 None:intergenic
TCCGTTTCACAAGGAAGAAA+CGG 0.478249 5_2:+25392844 Msa0764920:CDS
GAGGAAGAGACAGGGTTAGA+GGG 0.482199 5_2:+25394114 Msa0764920:CDS
TTGGTGAAATATTCCATGAA+TGG 0.487805 5_2:-25387240 None:intergenic
TGTTTCAGTGGCAAGAGAGT+TGG 0.488206 5_2:+25394817 Msa0764920:intron
ATCCGTCTCAAAAGCTGTTA+CGG 0.495453 5_2:+25392922 Msa0764920:CDS
ATTCGCCCCTCCATCTTCCT+AGG 0.509706 5_2:-25393982 None:intergenic
ATGGAGTGTCTGATGCTGTT+AGG 0.509929 5_2:-25392951 None:intergenic
GTTGTGTGTGTTGGTGACAC+TGG 0.511529 5_2:-25387131 None:intergenic
TTCAGTGGCAAGAGAGTTGG+AGG 0.512045 5_2:+25394820 Msa0764920:intron
GTTTCAAAAGCTGGAGCAGA+AGG 0.512100 5_2:-25393228 None:intergenic
GGATAAAGCTTTCCATTCAA+AGG 0.513084 5_2:-25394159 None:intergenic
CGGCGATAAGGTATTTGTCT+AGG 0.527943 5_2:-25387290 None:intergenic
GATGGAGAAGTGAGTGATGA+AGG 0.528934 5_2:+25394030 Msa0764920:CDS
CAGAACAACCAAATATTTCA+GGG 0.530107 5_2:-25394687 None:intergenic
TGTCGTGGTGGCTTCTGAGA+CGG 0.533737 5_2:-25392792 None:intergenic
AGCTGAGGAGTTGTTGTGGG+AGG 0.535173 5_2:+25387568 Msa0764920:CDS
CCTTAACCCTAACAGGAAAG+AGG 0.535529 5_2:+25387469 Msa0764920:CDS
TCACAACGGAAAATATTTAA+CGG 0.536756 5_2:+25387428 Msa0764920:CDS
GGGTCGTCGCCGCCGGCGAG+AGG 0.541837 5_2:+25387789 Msa0764920:CDS
TGATGCATCACCTAGGAAGA+TGG 0.544905 5_2:+25393972 Msa0764920:CDS
TTTCAAAGGGAATGGAGTTG+AGG 0.545121 5_2:+25394074 Msa0764920:CDS
TGAAGCTGAAGACGAGGTAT+GGG 0.549313 5_2:+25393070 Msa0764920:CDS
ATACTTATGATCCATTTCCA+TGG 0.551377 5_2:-25395034 None:intergenic
GCAACCGCCACAGCAGGAGA+AGG 0.552259 5_2:-25393258 None:intergenic
TGCATAGTAACATTATTTGG+AGG 0.555806 5_2:-25394198 None:intergenic
CTCCATCATCTTCAGCAACA+TGG 0.557123 5_2:-25394014 None:intergenic
CAACAAGCTTCGAAGCGGAA+TGG 0.557721 5_2:+25392744 Msa0764920:CDS
AAAGTCCGTCAAAGCCGAAA+CGG 0.559086 5_2:+25387327 Msa0764920:CDS
CTTAACCCTAACAGGAAAGA+GGG 0.559872 5_2:+25387470 Msa0764920:CDS
GAAAAGCTAGCAGAAACACT+AGG 0.561376 5_2:-25393285 None:intergenic
TACCATGTTGCTGAAGATGA+TGG 0.563040 5_2:+25394012 Msa0764920:CDS
GAGATGACACTTGAATTGCT+TGG 0.565959 5_2:-25387076 None:intergenic
GTGAGTGATGAAGGTGTGCA+GGG 0.570525 5_2:+25394039 Msa0764920:CDS
TGTTGAATGGGAGCCTGTAA+GGG 0.572736 5_2:+25393035 Msa0764920:CDS
TGAAGCTGAGGAGTTGTTGT+GGG 0.573285 5_2:+25387565 Msa0764920:CDS
ATATTAACGGAGTTAGAAAA+CGG 0.580788 5_2:+25387495 Msa0764920:CDS
GAGCCATTAAAAGAGCTCAA+TGG 0.582431 5_2:+25387349 Msa0764920:CDS
AATGGCAGCCAATACGTGAC+GGG 0.583517 5_2:+25387535 Msa0764920:CDS
CTTATCGCCGACGACAACAA+CGG 0.587613 5_2:+25387303 Msa0764920:CDS
CATGCCTTCTCCTGCTGTGG+CGG 0.590700 5_2:+25393254 Msa0764920:CDS
GGAATGGTGGGTTGCCACCG+TGG 0.591207 5_2:+25393106 Msa0764920:CDS
AGTATAACAACAATGTTCGA+TGG 0.591402 5_2:+25395052 Msa0764920:three_prime_UTR
TGTACTAAGAGTCCTTTGAA+TGG 0.592487 5_2:+25394147 Msa0764920:CDS
AATCTGCTAAACAAATGCAA+TGG 0.595832 5_2:-25394988 None:intergenic
AAATGCAATGGACTATTACA+AGG 0.595945 5_2:-25394976 None:intergenic
TAGCATGCCTTCTCCTGCTG+TGG 0.597635 5_2:+25393251 Msa0764920:CDS
GCAAGAGAGTTGGAGGCACA+AGG 0.599528 5_2:+25394827 Msa0764920:CDS
CGATAAGGTATTTGTCTAGG+TGG 0.599814 5_2:-25387287 None:intergenic
CTGCTAAGAGATATTTGTCG+TGG 0.604641 5_2:-25392807 None:intergenic
GTTCATCAAACAACGCAAGA+TGG 0.611011 5_2:+25392866 Msa0764920:CDS
GCATCACCTAGGAAGATGGA+GGG 0.611437 5_2:+25393976 Msa0764920:CDS
CTAAGAGATATTTGTCGTGG+TGG 0.618659 5_2:-25392804 None:intergenic
ACCTGAAAACTTCCTCTCGC+CGG 0.618862 5_2:-25387801 None:intergenic
ATGGTGGGTTGCCACCGTGG+AGG 0.619425 5_2:+25393109 Msa0764920:CDS
ATCGTTACACTGTTCCTCCA+CGG 0.622002 5_2:-25387618 None:intergenic
GAAGCAGCTTGAAATTGCCA+TGG 0.623259 5_2:+25395017 Msa0764920:three_prime_UTR
CCAAGTGAGAAAACACTCAT+CGG 0.623585 5_2:-25387768 None:intergenic
GAGAAAACACTCATCGGCGA+CGG 0.624119 5_2:-25387762 None:intergenic
GTGAAGCTGAGGAGTTGTTG+TGG 0.625119 5_2:+25387564 Msa0764920:CDS
TCAGTATGTAGTATGTACAA+AGG 0.626429 5_2:-25394884 None:intergenic
ACGGGTTTCAGGTGAAGCTG+AGG 0.630925 5_2:+25387553 Msa0764920:CDS
GATGAAGAATCCGTTTCACA+AGG 0.633387 5_2:+25392835 Msa0764920:CDS
TGCATCACCTAGGAAGATGG+AGG 0.637928 5_2:+25393975 Msa0764920:CDS
GATTCGTTTGTGAAAATGGA+GGG 0.639551 5_2:+25387645 Msa0764920:CDS
GAATGGCAGCCAATACGTGA+CGG 0.639715 5_2:+25387534 Msa0764920:CDS
AAACCCAACAAGCTTCGAAG+CGG 0.642582 5_2:+25392739 Msa0764920:CDS
TGATTCGTTTGTGAAAATGG+AGG 0.643249 5_2:+25387644 Msa0764920:CDS
ACGGTAGTAATCCGCCGTGG+AGG 0.648877 5_2:+25387604 Msa0764920:CDS
TGCGTCACAGTATTCCTCCA+CGG 0.649285 5_2:-25393123 None:intergenic
AGAAGATTGAGGAAGAGACA+GGG 0.656890 5_2:+25394106 Msa0764920:CDS
CGAATGATGATGCATCACCT+AGG 0.657346 5_2:+25393965 Msa0764920:CDS
GGAGGAAGCTGCAAACGAAG+AGG 0.659577 5_2:-25394180 None:intergenic
GAATGGGAGCCTGTAAGGGA+TGG 0.663159 5_2:+25393039 Msa0764920:CDS
TGACGCATGATATTCCGCAT+AGG 0.668875 5_2:+25393139 Msa0764920:CDS
TAAAAGAGCTCAATGGACAG+TGG 0.674821 5_2:+25387356 Msa0764920:CDS
TGAAAACTTCCTCTCGCCGG+CGG 0.678031 5_2:-25387798 None:intergenic
CATCACCTAGGAAGATGGAG+GGG 0.680036 5_2:+25393977 Msa0764920:CDS
TTCGTGTGAAGCTGAAGACG+AGG 0.686023 5_2:+25393064 Msa0764920:CDS
GTTACACTGTTCCTCCACGG+CGG 0.686028 5_2:-25387615 None:intergenic
TCCTGAGTAACAGTCCTATG+CGG 0.703666 5_2:-25393153 None:intergenic
GAAACGGTAGTAATCCGCCG+TGG 0.715772 5_2:+25387601 Msa0764920:CDS
AAGCTAGCAGAAACACTAGG+AGG 0.716084 5_2:-25393282 None:intergenic
ATAAGGTTAAAGAGTCACAA+CGG 0.725704 5_2:+25387414 Msa0764920:CDS
TGCAATGGACTATTACAAGG+CGG 0.736910 5_2:-25394973 None:intergenic
GTCACAGTATTCCTCCACGG+TGG 0.799476 5_2:-25393120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAAATATTTTATTTTA+TGG + chr5_2:25395190-25395209 Msa0764920:three_prime_UTR 0.0%
!!! AATATTTTTCTTGTTAAAAA+TGG + chr5_2:25388355-25388374 Msa0764920:intron 10.0%
!!! TTTTTTTTATTTTTAACTTG+TGG - chr5_2:25388558-25388577 None:intergenic 10.0%
!!! TTATAATTTGATAATTCATA+TGG + chr5_2:25388615-25388634 Msa0764920:intron 10.0%
!!! TATAATTTGATAATTCATAT+GGG + chr5_2:25388616-25388635 Msa0764920:intron 10.0%
!!! ATCTAATATATTTTTTTGAA+AGG + chr5_2:25389434-25389453 Msa0764920:intron 10.0%
!!! TTATCTTTTTAAAAACAAAA+TGG - chr5_2:25389835-25389854 None:intergenic 10.0%
!!! ATGTTACTTATTTTAATTTT+GGG - chr5_2:25389880-25389899 None:intergenic 10.0%
!!! TATCTTTTATTTCTAAATTT+CGG - chr5_2:25390459-25390478 None:intergenic 10.0%
!!! AATATCTATTTTTTTTTATC+TGG + chr5_2:25393409-25393428 Msa0764920:intron 10.0%
!!! ATATCTATTTTTTTTTATCT+GGG + chr5_2:25393410-25393429 Msa0764920:intron 10.0%
!! AGTTATATGTTAAAATATTT+AGG + chr5_2:25394921-25394940 Msa0764920:CDS 10.0%
!! AAAGAAAAATTTAGTAAGAT+TGG + chr5_2:25388864-25388883 Msa0764920:intron 15.0%
!! TTAAGATCCAATAAATTTAA+AGG - chr5_2:25388943-25388962 None:intergenic 15.0%
!! TAATATATAAATGTGTAACT+GGG - chr5_2:25389163-25389182 None:intergenic 15.0%
!! GCAAAAAAAAAAAAAAAAAG+AGG + chr5_2:25389189-25389208 Msa0764920:intron 15.0%
!! TAAACTTATAGTAACTATAA+GGG + chr5_2:25389273-25389292 Msa0764920:intron 15.0%
!! CACTAAAAATGTAATATTTA+AGG - chr5_2:25389467-25389486 None:intergenic 15.0%
!!! TTTTTTTATTTTTGTGAAGT+TGG + chr5_2:25389615-25389634 Msa0764920:intron 15.0%
!!! GATGTTACTTATTTTAATTT+TGG - chr5_2:25389881-25389900 None:intergenic 15.0%
!! ACAAGTTATTAATTAGATAA+AGG - chr5_2:25390513-25390532 None:intergenic 15.0%
!! AAAATGAAAACATAAACAAA+AGG + chr5_2:25391131-25391150 Msa0764920:intron 15.0%
!!! ATTTATATCCTTCATTTTTA+AGG + chr5_2:25391792-25391811 Msa0764920:intron 15.0%
!!! AATCCTAACTTTTTTTTTTA+AGG + chr5_2:25391879-25391898 Msa0764920:intron 15.0%
!! TTTAAACTCATATTAAACAA+TGG + chr5_2:25391974-25391993 Msa0764920:intron 15.0%
!! TATAGTAATCTAATTTATGT+CGG - chr5_2:25392288-25392307 None:intergenic 15.0%
!!! AAAGTTTTGATTTTTTTATC+TGG + chr5_2:25393336-25393355 Msa0764920:intron 15.0%
!!! AAGTTTTGATTTTTTTATCT+GGG + chr5_2:25393337-25393356 Msa0764920:intron 15.0%
!! ACTAGATTAATTAATCAAAA+GGG - chr5_2:25394270-25394289 None:intergenic 15.0%
!!! AATGACTATACCTTTTTTAA+CGG - chr5_2:25388320-25388339 None:intergenic 20.0%
!! CAAAAGTCCTTTAAATTTAT+TGG + chr5_2:25388933-25388952 Msa0764920:intron 20.0%
!!! TTCAATAAATTTTGTGAGAT+CGG - chr5_2:25388969-25388988 None:intergenic 20.0%
!! CTAATATATAAATGTGTAAC+TGG - chr5_2:25389164-25389183 None:intergenic 20.0%
!!! AAGTTTTTTAAACCTTAGTA+AGG + chr5_2:25389231-25389250 Msa0764920:intron 20.0%
!! CTTATAGTTACTATAAGTTT+AGG - chr5_2:25389274-25389293 None:intergenic 20.0%
!! CTAAACTTATAGTAACTATA+AGG + chr5_2:25389272-25389291 Msa0764920:intron 20.0%
!! AAGATATAGACACAAAAATA+TGG - chr5_2:25389300-25389319 None:intergenic 20.0%
!! AAAAAACTCAATTCATTTGA+TGG - chr5_2:25389590-25389609 None:intergenic 20.0%
!!! TTTACTTTAGTTCTTACAAA+AGG - chr5_2:25389759-25389778 None:intergenic 20.0%
!! AATCAATTATAGGAATTCAT+GGG - chr5_2:25389987-25390006 None:intergenic 20.0%
!! AAATCAATTATAGGAATTCA+TGG - chr5_2:25389988-25390007 None:intergenic 20.0%
!!! GAATTTTTAGGAAAATACTT+GGG - chr5_2:25390181-25390200 None:intergenic 20.0%
!!! CAAGTATTTTCCTAAAAATT+CGG + chr5_2:25390180-25390199 Msa0764920:intron 20.0%
!!! AAGTATTTTCCTAAAAATTC+GGG + chr5_2:25390181-25390200 Msa0764920:intron 20.0%
!!! TTTTATTTCTAAATTTCGGT+GGG - chr5_2:25390455-25390474 None:intergenic 20.0%
!! GATAACTTGAAATTAGTTAA+TGG + chr5_2:25390475-25390494 Msa0764920:intron 20.0%
!! AATGTGTAAACAATTTCTTT+AGG - chr5_2:25390642-25390661 None:intergenic 20.0%
!!! TTTGTATTTGTATTTTCAAG+TGG - chr5_2:25390796-25390815 None:intergenic 20.0%
!! CAAGATTAACCTTATTAATT+TGG + chr5_2:25390955-25390974 Msa0764920:intron 20.0%
!!! ATATTTTGGCCAAATTAATA+AGG - chr5_2:25390967-25390986 None:intergenic 20.0%
!!! ACTAGATGTTAGATATATTT+TGG - chr5_2:25390981-25391000 None:intergenic 20.0%
!! TGTGAATATCAAAGAAATTA+AGG - chr5_2:25391173-25391192 None:intergenic 20.0%
!!! ACAAAGTTTTTAACCTTATA+TGG + chr5_2:25391564-25391583 Msa0764920:intron 20.0%
!! TTCTATTTCCTTAAAAATGA+AGG - chr5_2:25391803-25391822 None:intergenic 20.0%
!! CTTCCTTAAAAAAAAAAGTT+AGG - chr5_2:25391885-25391904 None:intergenic 20.0%
!! AAAACAACACTAATTAAGTT+AGG - chr5_2:25391911-25391930 None:intergenic 20.0%
!! CTTTATTCGCATTATATTAA+AGG - chr5_2:25392109-25392128 None:intergenic 20.0%
!!! GTTTTTTACTATTCATTCTT+GGG - chr5_2:25392242-25392261 None:intergenic 20.0%
!!! TGTTTTTTACTATTCATTCT+TGG - chr5_2:25392243-25392262 None:intergenic 20.0%
!! CATAAATTAGATTACTATAG+AGG + chr5_2:25392289-25392308 Msa0764920:intron 20.0%
!!! GTTTATTGGATTTTAATGAT+GGG - chr5_2:25392536-25392555 None:intergenic 20.0%
!! TTATATATGTGAATGAAAAG+TGG - chr5_2:25392562-25392581 None:intergenic 20.0%
!! AAATGAAATGTGTTGTAAAA+GGG - chr5_2:25392598-25392617 None:intergenic 20.0%
!!! ATATTTTTTTTGTTGGTGAA+GGG - chr5_2:25392623-25392642 None:intergenic 20.0%
!!! GGTTTTGATATTTTTTTTGT+TGG - chr5_2:25392630-25392649 None:intergenic 20.0%
!!! CTAAAATGAGTGTTTTAATA+TGG - chr5_2:25392661-25392680 None:intergenic 20.0%
!!! AAGTATCAATATCTTTTATC+TGG + chr5_2:25393481-25393500 Msa0764920:intron 20.0%
!!! AGTATCAATATCTTTTATCT+GGG + chr5_2:25393482-25393501 Msa0764920:intron 20.0%
!!! TTTTGATTCAATCATCAATT+TGG + chr5_2:25393526-25393545 Msa0764920:intron 20.0%
!! AATTTAATCCTCAAAACTAT+TGG - chr5_2:25393649-25393668 None:intergenic 20.0%
!! TAGATTAATTAATCAAAAGG+GGG - chr5_2:25394268-25394287 None:intergenic 20.0%
!! CTAGATTAATTAATCAAAAG+GGG - chr5_2:25394269-25394288 None:intergenic 20.0%
!! GACTAGATTAATTAATCAAA+AGG - chr5_2:25394271-25394290 None:intergenic 20.0%
! AAACTCATAACCAAGTAATA+AGG + chr5_2:25387397-25387416 Msa0764920:CDS 25.0%
! TCACAACGGAAAATATTTAA+CGG + chr5_2:25387428-25387447 Msa0764920:CDS 25.0%
! ATATTAACGGAGTTAGAAAA+CGG + chr5_2:25387495-25387514 Msa0764920:CDS 25.0%
!! TGATGTTGACTATAATATCA+TGG + chr5_2:25387920-25387939 Msa0764920:intron 25.0%
! CAATTGAGCAAAATATATTG+AGG + chr5_2:25388081-25388100 Msa0764920:intron 25.0%
! TGCATGAATATTGTGTTTAA+GGG - chr5_2:25388219-25388238 None:intergenic 25.0%
! ATGCATGAATATTGTGTTTA+AGG - chr5_2:25388220-25388239 None:intergenic 25.0%
!!! TTAAGCACACTTTTTTCAAA+AGG - chr5_2:25388297-25388316 None:intergenic 25.0%
! GAAACAAAATTATGACCATT+CGG - chr5_2:25388495-25388514 None:intergenic 25.0%
! TTACAAAACCTAGTATATTG+AGG - chr5_2:25388522-25388541 None:intergenic 25.0%
!!! TTTTTTATCATATGCATCCA+TGG - chr5_2:25388783-25388802 None:intergenic 25.0%
!!! ACAAGTTGATGATTCTTTTT+TGG + chr5_2:25388993-25389012 Msa0764920:intron 25.0%
! CTATTTCATTCAAACTCTAT+TGG - chr5_2:25389347-25389366 None:intergenic 25.0%
! TTTCATTTATCTCTTTCTTG+CGG - chr5_2:25389798-25389817 None:intergenic 25.0%
!!! CGAATTTTTAGGAAAATACT+TGG - chr5_2:25390182-25390201 None:intergenic 25.0%
! TTTCTTTAGTGGAAAATAGT+TGG - chr5_2:25390264-25390283 None:intergenic 25.0%
!! TGTTATCACATTTTCTTTAG+TGG - chr5_2:25390275-25390294 None:intergenic 25.0%
!!! CTTTTATTTCTAAATTTCGG+TGG - chr5_2:25390456-25390475 None:intergenic 25.0%
! TAAATGGTTTCATCTACTTA+GGG - chr5_2:25390685-25390704 None:intergenic 25.0%
! TAGGATACTACTTAGTTATA+AGG + chr5_2:25390718-25390737 Msa0764920:intron 25.0%
!! CTACTTAGTTATAAGGTATT+TGG + chr5_2:25390725-25390744 Msa0764920:intron 25.0%
!! TTCCCTTTTCATTATTGTAT+AGG + chr5_2:25391069-25391088 Msa0764920:intron 25.0%
! GACCTATACAATAATGAAAA+GGG - chr5_2:25391074-25391093 None:intergenic 25.0%
! AGACCTATACAATAATGAAA+AGG - chr5_2:25391075-25391094 None:intergenic 25.0%
! AAAGAAATTAAGGTGATGTT+TGG - chr5_2:25391163-25391182 None:intergenic 25.0%
! ATATATGGTATATACTATGG+TGG - chr5_2:25391259-25391278 None:intergenic 25.0%
! CGTATATATGGTATATACTA+TGG - chr5_2:25391262-25391281 None:intergenic 25.0%
! ATTAGGAAATCACGTATATA+TGG - chr5_2:25391274-25391293 None:intergenic 25.0%
! TTCAACAATCATTCTTGATT+AGG - chr5_2:25391291-25391310 None:intergenic 25.0%
! TCAAGAATGATTGTTGAAAT+AGG + chr5_2:25391293-25391312 Msa0764920:intron 25.0%
! CAAGAATGATTGTTGAAATA+GGG + chr5_2:25391294-25391313 Msa0764920:intron 25.0%
! AGTAAAACAATACAATAGGT+AGG - chr5_2:25391542-25391561 None:intergenic 25.0%
! GTCTAGTAAAACAATACAAT+AGG - chr5_2:25391546-25391565 None:intergenic 25.0%
! AGATTCAATCAAACCATATA+AGG - chr5_2:25391580-25391599 None:intergenic 25.0%
! TGAACATAACTCAATTGTTA+AGG - chr5_2:25391767-25391786 None:intergenic 25.0%
! ATGAGTTTAAATTGAAGACA+TGG - chr5_2:25391965-25391984 None:intergenic 25.0%
!!! CGTTTATTGGATTTTAATGA+TGG - chr5_2:25392537-25392556 None:intergenic 25.0%
! GAAATGAAATGTGTTGTAAA+AGG - chr5_2:25392599-25392618 None:intergenic 25.0%
!!! TATTTTTTTTGTTGGTGAAG+GGG - chr5_2:25392622-25392641 None:intergenic 25.0%
!!! GATATTTTTTTTGTTGGTGA+AGG - chr5_2:25392624-25392643 None:intergenic 25.0%
!!! TGTTTTAATATGGAATGAAG+AGG - chr5_2:25392651-25392670 None:intergenic 25.0%
!!! TTTTTTTATCTGGGTTGTTT+TGG + chr5_2:25393346-25393365 Msa0764920:intron 25.0%
!!! AGTTTTGAGGATTAAATTGA+CGG + chr5_2:25393651-25393670 Msa0764920:intron 25.0%
!! AGCCACTAATTTGAAATATT+AGG + chr5_2:25393707-25393726 Msa0764920:intron 25.0%
!! GCCACTAATTTGAAATATTA+GGG + chr5_2:25393708-25393727 Msa0764920:intron 25.0%
!! CCACTAATTTGAAATATTAG+GGG + chr5_2:25393709-25393728 Msa0764920:intron 25.0%
!!! GATATTCTTTGGTTTTCAAA+GGG + chr5_2:25394061-25394080 Msa0764920:CDS 25.0%
! AGATTAATTAATCAAAAGGG+GGG - chr5_2:25394267-25394286 None:intergenic 25.0%
! AATTTCAATAAACGAGTGAT+TGG - chr5_2:25394473-25394492 None:intergenic 25.0%
!!! TTTAAAAGTGTGTTTTGTCA+CGG + chr5_2:25394598-25394617 Msa0764920:intron 25.0%
!!! TGACACTGGTTTTGATTTTT+GGG - chr5_2:25387120-25387139 None:intergenic 30.0%
CTATAGTATCAAACCATTCA+TGG + chr5_2:25387227-25387246 Msa0764920:exon 30.0%
TTGGTGAAATATTCCATGAA+TGG - chr5_2:25387243-25387262 None:intergenic 30.0%
GAGCTTAATGATCTTTGATT+TGG - chr5_2:25387262-25387281 None:intergenic 30.0%
GACTCTTTAACCTTATTACT+TGG - chr5_2:25387410-25387429 None:intergenic 30.0%
ATAAGGTTAAAGAGTCACAA+CGG + chr5_2:25387414-25387433 Msa0764920:CDS 30.0%
AGGAAAGAGGGTAATATTAA+CGG + chr5_2:25387482-25387501 Msa0764920:CDS 30.0%
TGATGATTCGTTTGTGAAAA+TGG + chr5_2:25387641-25387660 Msa0764920:CDS 30.0%
!!! GAGAGTTTGTTATCTTCTTT+TGG + chr5_2:25387708-25387727 Msa0764920:CDS 30.0%
!! CATGGCTTTTATTTATTTCG+CGG + chr5_2:25387938-25387957 Msa0764920:intron 30.0%
TTTCGTAACCTCAATATACT+AGG + chr5_2:25388511-25388530 Msa0764920:intron 30.0%
! ATTTAGTAAGATTGGTCAAG+AGG + chr5_2:25388872-25388891 Msa0764920:intron 30.0%
TCTTCGATGAAATATCTGTT+TGG + chr5_2:25389102-25389121 Msa0764920:intron 30.0%
CTTCGATGAAATATCTGTTT+GGG + chr5_2:25389103-25389122 Msa0764920:intron 30.0%
!! TAAATCTCTTAGCCTTACTA+AGG - chr5_2:25389246-25389265 None:intergenic 30.0%
! AACTCAATTCATTTGATGGT+TGG - chr5_2:25389586-25389605 None:intergenic 30.0%
!!! TTATTTTTGTGAAGTTGGTC+TGG + chr5_2:25389620-25389639 Msa0764920:intron 30.0%
!! TATTTTTGTGAAGTTGGTCT+GGG + chr5_2:25389621-25389640 Msa0764920:intron 30.0%
!! GTAAGTTGATGCTTAACATA+AGG - chr5_2:25389689-25389708 None:intergenic 30.0%
! TTAAGCATCAACTTACGTTT+TGG + chr5_2:25389693-25389712 Msa0764920:intron 30.0%
AAACCTGCCTACTAATAATT+CGG + chr5_2:25390014-25390033 Msa0764920:intron 30.0%
GTGTTATCCGAATTATTAGT+AGG - chr5_2:25390024-25390043 None:intergenic 30.0%
CTAATAATTCGGATAACACT+TGG + chr5_2:25390025-25390044 Msa0764920:intron 30.0%
!! CTTCTTTAGCTTTAGACTTT+AGG - chr5_2:25390603-25390622 None:intergenic 30.0%
GTAAATGGTTTCATCTACTT+AGG - chr5_2:25390686-25390705 None:intergenic 30.0%
!! CTATGGTGGATCTTATAATA+TGG - chr5_2:25391245-25391264 None:intergenic 30.0%
AATATGAGACTCATTGTTCA+AGG + chr5_2:25391486-25391505 Msa0764920:intron 30.0%
! GTTCAAGGAATGTCAATTTT+AGG + chr5_2:25391501-25391520 Msa0764920:intron 30.0%
! ATTTTTCATGTACGAGTCTA+CGG - chr5_2:25391694-25391713 None:intergenic 30.0%
TAAATCTAGATGATGACCAA+TGG + chr5_2:25391826-25391845 Msa0764920:intron 30.0%
TTAATTACGCTCTAATCACA+TGG - chr5_2:25391852-25391871 None:intergenic 30.0%
!! TAATGATGGGTGAAAATTGT+GGG - chr5_2:25392523-25392542 None:intergenic 30.0%
!! TTAATGATGGGTGAAAATTG+TGG - chr5_2:25392524-25392543 None:intergenic 30.0%
!!! ATTTTTTTTGTTGGTGAAGG+GGG - chr5_2:25392621-25392640 None:intergenic 30.0%
TTTGGATTCTTCTGTTGAAT+GGG + chr5_2:25393023-25393042 Msa0764920:CDS 30.0%
! TCAATATCTTTTATCTGGGT+TGG + chr5_2:25393486-25393505 Msa0764920:intron 30.0%
!! ATTAGTCACCAATAGTTTTG+AGG + chr5_2:25393638-25393657 Msa0764920:intron 30.0%
CCCCTAATATTTCAAATTAG+TGG - chr5_2:25393712-25393731 None:intergenic 30.0%
TTAGCATAGAAGATGGTATT+TGG - chr5_2:25393856-25393875 None:intergenic 30.0%
CTTCTTTGGTTAATTGTGTT+TGG + chr5_2:25393929-25393948 Msa0764920:intron 30.0%
!!! GGATATTCTTTGGTTTTCAA+AGG + chr5_2:25394060-25394079 Msa0764920:CDS 30.0%
TGCATAGTAACATTATTTGG+AGG - chr5_2:25394201-25394220 None:intergenic 30.0%
TCCAAATAATGTTACTATGC+AGG + chr5_2:25394200-25394219 Msa0764920:CDS 30.0%
ACCTGCATAGTAACATTATT+TGG - chr5_2:25394204-25394223 None:intergenic 30.0%
!! GAATTCTAACCTTTTGAGAA+AGG - chr5_2:25394240-25394259 None:intergenic 30.0%
TGACAAAATAGTTGTTCCTT+AGG - chr5_2:25394333-25394352 None:intergenic 30.0%
! TAGATTAGTTAATCAAGCGA+TGG + chr5_2:25394356-25394375 Msa0764920:intron 30.0%
!!! ATCGTTTTGCTTTGTTTATC+TGG + chr5_2:25394394-25394413 Msa0764920:intron 30.0%
! GTGACAAAACACACTTTTAA+AGG - chr5_2:25394599-25394618 None:intergenic 30.0%
CAGAACAACCAAATATTTCA+GGG - chr5_2:25394690-25394709 None:intergenic 30.0%
TCAGAACAACCAAATATTTC+AGG - chr5_2:25394691-25394710 None:intergenic 30.0%
GTAAGAGATACTGTAAAACA+AGG - chr5_2:25394752-25394771 None:intergenic 30.0%
! TTCATTTTCTTGTGTTTCAG+TGG + chr5_2:25394805-25394824 Msa0764920:intron 30.0%
TCAGTATGTAGTATGTACAA+AGG - chr5_2:25394887-25394906 None:intergenic 30.0%
!! AAATGCAATGGACTATTACA+AGG - chr5_2:25394979-25394998 None:intergenic 30.0%
AATCTGCTAAACAAATGCAA+TGG - chr5_2:25394991-25395010 None:intergenic 30.0%
ATACTTATGATCCATTTCCA+TGG - chr5_2:25395037-25395056 None:intergenic 30.0%
AGTATAACAACAATGTTCGA+TGG + chr5_2:25395052-25395071 Msa0764920:three_prime_UTR 30.0%
!!! CGATGGTTTTGTAATGTTAT+AGG + chr5_2:25395069-25395088 Msa0764920:three_prime_UTR 30.0%
!!! ACTGGTTTTGATTTTTGGGT+AGG - chr5_2:25387116-25387135 None:intergenic 35.0%
!!! GTGACACTGGTTTTGATTTT+TGG - chr5_2:25387121-25387140 None:intergenic 35.0%
TTATTGTGTGTTGTGTGTGT+TGG - chr5_2:25387143-25387162 None:intergenic 35.0%
! TGTCCATTGAGCTCTTTTAA+TGG - chr5_2:25387355-25387374 None:intergenic 35.0%
TATTACCCTCTTTCCTGTTA+GGG - chr5_2:25387478-25387497 None:intergenic 35.0%
ATATTACCCTCTTTCCTGTT+AGG - chr5_2:25387479-25387498 None:intergenic 35.0%
GTGTAGATGGTAAAAACGAA+TGG + chr5_2:25387517-25387536 Msa0764920:CDS 35.0%
TGATTCGTTTGTGAAAATGG+AGG + chr5_2:25387644-25387663 Msa0764920:CDS 35.0%
GATTCGTTTGTGAAAATGGA+GGG + chr5_2:25387645-25387664 Msa0764920:CDS 35.0%
!! TGATGATGTTTCTTTTGCGT+CGG + chr5_2:25387734-25387753 Msa0764920:CDS 35.0%
!!! CGTCGTTAATCCTCTTTTTT+CGG + chr5_2:25388182-25388201 Msa0764920:intron 35.0%
ACTCGTTTAACCGAAAAAAG+AGG - chr5_2:25388195-25388214 None:intergenic 35.0%
GTGTGCTTAACCGTTAAAAA+AGG + chr5_2:25388307-25388326 Msa0764920:intron 35.0%
ACAAAAGAAAATCCCTACCA+TGG + chr5_2:25388763-25388782 Msa0764920:intron 35.0%
TATCATATGCATCCATGGTA+GGG - chr5_2:25388778-25388797 None:intergenic 35.0%
TTATCATATGCATCCATGGT+AGG - chr5_2:25388779-25388798 None:intergenic 35.0%
TTTCATAAGCTCAACAATCC+AGG + chr5_2:25389043-25389062 Msa0764920:intron 35.0%
! ATACAGCAATTTTCCTTGTG+TGG + chr5_2:25389072-25389091 Msa0764920:intron 35.0%
! TACAGCAATTTTCCTTGTGT+GGG + chr5_2:25389073-25389092 Msa0764920:intron 35.0%
TTGGGTCATATGCTGTAAAT+TGG + chr5_2:25389121-25389140 Msa0764920:intron 35.0%
TGGGTCATATGCTGTAAATT+GGG + chr5_2:25389122-25389141 Msa0764920:intron 35.0%
!! AAAGAGGCACTTTCTAACTA+TGG + chr5_2:25389205-25389224 Msa0764920:intron 35.0%
!! ATTTTTGTGAAGTTGGTCTG+GGG + chr5_2:25389622-25389641 Msa0764920:intron 35.0%
!! CATCAACTTACGTTTTGGAT+GGG + chr5_2:25389698-25389717 Msa0764920:intron 35.0%
!! ATCAACTTACGTTTTGGATG+GGG + chr5_2:25389699-25389718 Msa0764920:intron 35.0%
GGGTATGTGTGTTAGTAAAA+TGG - chr5_2:25389860-25389879 None:intergenic 35.0%
TATCCGAATTATTAGTAGGC+AGG - chr5_2:25390020-25390039 None:intergenic 35.0%
AAATGGCAATGTGTGTTATG+TGG - chr5_2:25390084-25390103 None:intergenic 35.0%
!! TAGTGGAAAATAGTTGGTGA+AGG - chr5_2:25390258-25390277 None:intergenic 35.0%
AGATGTTCAATGTCTTCGAA+AGG - chr5_2:25390382-25390401 None:intergenic 35.0%
TGATATTCACAAACACGTCA+AGG + chr5_2:25391182-25391201 Msa0764920:intron 35.0%
ATAGGTAGGTATGACTCATA+TGG - chr5_2:25391528-25391547 None:intergenic 35.0%
! GTCAATAGTTGTCATTTGCT+AGG + chr5_2:25391601-25391620 Msa0764920:intron 35.0%
GACAAATGGAGATTAAAGGT+TGG - chr5_2:25391660-25391679 None:intergenic 35.0%
GTGAGACAAATGGAGATTAA+AGG - chr5_2:25391664-25391683 None:intergenic 35.0%
CGGGTTTGTAATAATCTGTT+GGG - chr5_2:25392387-25392406 None:intergenic 35.0%
TCAACTGAGATAACACGTTT+GGG - chr5_2:25392437-25392456 None:intergenic 35.0%
ATGAAAAGTGGTGCGTTTAT+TGG - chr5_2:25392550-25392569 None:intergenic 35.0%
TCAAACTAGTCCAAAGACTT+TGG + chr5_2:25393005-25393024 Msa0764920:CDS 35.0%
ACAGAAGAATCCAAAGTCTT+TGG - chr5_2:25393018-25393037 None:intergenic 35.0%
CTTTGGATTCTTCTGTTGAA+TGG + chr5_2:25393022-25393041 Msa0764920:CDS 35.0%
! AGGTATGGGAATTTTCTTAG+AGG + chr5_2:25393084-25393103 Msa0764920:CDS 35.0%
! GGTATGGGAATTTTCTTAGA+GGG + chr5_2:25393085-25393104 Msa0764920:CDS 35.0%
! AATTTTCTTAGAGGGAATGG+TGG + chr5_2:25393093-25393112 Msa0764920:CDS 35.0%
! ATTTTCTTAGAGGGAATGGT+GGG + chr5_2:25393094-25393113 Msa0764920:CDS 35.0%
!!! TGGGTTGTTTTGGTTTAGTT+TGG + chr5_2:25393356-25393375 Msa0764920:intron 35.0%
!!! ATCTTTTATCTGGGTTGGTT+TGG + chr5_2:25393491-25393510 Msa0764920:intron 35.0%
ACACGCTTAATCATACTCAA+TGG - chr5_2:25393754-25393773 None:intergenic 35.0%
TTACTGCTTGAATTCTGCTT+TGG + chr5_2:25393899-25393918 Msa0764920:intron 35.0%
!!! GCTTTGGTTTTTTGCTTCTT+TGG + chr5_2:25393915-25393934 Msa0764920:intron 35.0%
!!! TCTTTGGTTTTCAAAGGGAA+TGG + chr5_2:25394066-25394085 Msa0764920:CDS 35.0%
TGTACTAAGAGTCCTTTGAA+TGG + chr5_2:25394147-25394166 Msa0764920:CDS 35.0%
GGATAAAGCTTTCCATTCAA+AGG - chr5_2:25394162-25394181 None:intergenic 35.0%
! TGTTACTATGCAGGTTGTTT+TGG + chr5_2:25394209-25394228 Msa0764920:CDS 35.0%
! TTGGTTCTTCCTTTCTCAAA+AGG + chr5_2:25394228-25394247 Msa0764920:CDS 35.0%
TCTAAATCAACCAAGTCCTA+AGG + chr5_2:25394314-25394333 Msa0764920:intron 35.0%
AATAGTTGTTCCTTAGGACT+TGG - chr5_2:25394327-25394346 None:intergenic 35.0%
TTCGCCAACATGTTATGTAA+AGG - chr5_2:25394420-25394439 None:intergenic 35.0%
GAGATGACACTTGAATTGCT+TGG - chr5_2:25387079-25387098 None:intergenic 40.0%
!!! GGTTTTGATTTTTGGGTAGG+AGG - chr5_2:25387113-25387132 None:intergenic 40.0%
! CGATAAGGTATTTGTCTAGG+TGG - chr5_2:25387290-25387309 None:intergenic 40.0%
! CTCTTTTAATGGCTCCGTTT+CGG - chr5_2:25387344-25387363 None:intergenic 40.0%
GAGCCATTAAAAGAGCTCAA+TGG + chr5_2:25387349-25387368 Msa0764920:CDS 40.0%
TAAAAGAGCTCAATGGACAG+TGG + chr5_2:25387356-25387375 Msa0764920:CDS 40.0%
CTCTTTCCTGTTAGGGTTAA+GGG - chr5_2:25387471-25387490 None:intergenic 40.0%
CTTAACCCTAACAGGAAAGA+GGG + chr5_2:25387470-25387489 Msa0764920:CDS 40.0%
GAGTTAGAAAACGGTGTAGA+TGG + chr5_2:25387504-25387523 Msa0764920:CDS 40.0%
! TTGTTGTGGGAGGTTTTTGA+AGG + chr5_2:25387578-25387597 Msa0764920:CDS 40.0%
! TGTTGTGGGAGGTTTTTGAA+GGG + chr5_2:25387579-25387598 Msa0764920:CDS 40.0%
!!! TGAAAATGGAGGGTGTTTTG+TGG + chr5_2:25387655-25387674 Msa0764920:CDS 40.0%
!!! GAAAATGGAGGGTGTTTTGT+GGG + chr5_2:25387656-25387675 Msa0764920:CDS 40.0%
CCAAGTGAGAAAACACTCAT+CGG - chr5_2:25387771-25387790 None:intergenic 40.0%
! CGATGAGTGTTTTCTCACTT+GGG + chr5_2:25387769-25387788 Msa0764920:CDS 40.0%
GAATTGCTCTATGAGTCTCT+TGG + chr5_2:25388904-25388923 Msa0764920:intron 40.0%
! ACAGCAATTTTCCTTGTGTG+GGG + chr5_2:25389074-25389093 Msa0764920:intron 40.0%
! AGGTCTTGATTCTGTTGACT+AGG + chr5_2:25389658-25389677 Msa0764920:intron 40.0%
!! GCATCAACTTACGTTTTGGA+TGG + chr5_2:25389697-25389716 Msa0764920:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr5_2:25390057-25390076 Msa0764920:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr5_2:25390058-25390077 Msa0764920:intron 40.0%
CATCCATGAGTACATTTGTG+TGG + chr5_2:25390123-25390142 Msa0764920:intron 40.0%
CTCACCGTGACATTAAATCT+GGG - chr5_2:25390149-25390168 None:intergenic 40.0%
TCTCACCGTGACATTAAATC+TGG - chr5_2:25390150-25390169 None:intergenic 40.0%
! GAGTGAACACCCGAATTTTT+AGG - chr5_2:25390193-25390212 None:intergenic 40.0%
GGCATGGAGCAGATATATAT+GGG - chr5_2:25390237-25390256 None:intergenic 40.0%
AGGCATGGAGCAGATATATA+TGG - chr5_2:25390238-25390257 None:intergenic 40.0%
!! GAAAATAGTTGGTGAAGGCA+TGG - chr5_2:25390253-25390272 None:intergenic 40.0%
ATAACCGCACTCCTTAAGAT+TGG + chr5_2:25390323-25390342 Msa0764920:intron 40.0%
TAACCGCACTCCTTAAGATT+GGG + chr5_2:25390324-25390343 Msa0764920:intron 40.0%
!! TTCGAAAGGTACTTGAGGAT+AGG - chr5_2:25390368-25390387 None:intergenic 40.0%
!! ATGTCTTCGAAAGGTACTTG+AGG - chr5_2:25390373-25390392 None:intergenic 40.0%
ATGGTTTCATCTACTTAGGG+AGG - chr5_2:25390682-25390701 None:intergenic 40.0%
TGAAACCATTTACGAGCGAA+TGG + chr5_2:25390693-25390712 Msa0764920:intron 40.0%
AAAAGGGAAAATGCGTGATG+TGG - chr5_2:25391058-25391077 None:intergenic 40.0%
GATTAAAGGTTGGCGCAATT+GGG - chr5_2:25391650-25391669 None:intergenic 40.0%
AGATTAAAGGTTGGCGCAAT+TGG - chr5_2:25391651-25391670 None:intergenic 40.0%
GCGGGTTTGTAATAATCTGT+TGG - chr5_2:25392388-25392407 None:intergenic 40.0%
AGATAACACGTTTGGGTGAA+AGG - chr5_2:25392430-25392449 None:intergenic 40.0%
GTCAACTGAGATAACACGTT+TGG - chr5_2:25392438-25392457 None:intergenic 40.0%
! GGTGAAAATTGTGGGTGTTT+TGG - chr5_2:25392515-25392534 None:intergenic 40.0%
! TTGTAAAAGGGTGTAGTGGT+GGG - chr5_2:25392586-25392605 None:intergenic 40.0%
! TGTGTTGTAAAAGGGTGTAG+TGG - chr5_2:25392590-25392609 None:intergenic 40.0%
CTAAGAGATATTTGTCGTGG+TGG - chr5_2:25392807-25392826 None:intergenic 40.0%
CTGCTAAGAGATATTTGTCG+TGG - chr5_2:25392810-25392829 None:intergenic 40.0%
GATGAAGAATCCGTTTCACA+AGG + chr5_2:25392835-25392854 Msa0764920:CDS 40.0%
TCCGTTTCACAAGGAAGAAA+CGG + chr5_2:25392844-25392863 Msa0764920:CDS 40.0%
ACCGTTTCTTCCTTGTGAAA+CGG - chr5_2:25392848-25392867 None:intergenic 40.0%
GTTCATCAAACAACGCAAGA+TGG + chr5_2:25392866-25392885 Msa0764920:CDS 40.0%
GGATAACGTTGTCGTAGTTT+GGG - chr5_2:25392906-25392925 None:intergenic 40.0%
ATCCGTCTCAAAAGCTGTTA+CGG + chr5_2:25392922-25392941 Msa0764920:CDS 40.0%
TCAGACACTCCATTTCTTCT+CGG + chr5_2:25392961-25392980 Msa0764920:CDS 40.0%
! GGGAATTTTCTTAGAGGGAA+TGG + chr5_2:25393090-25393109 Msa0764920:CDS 40.0%
ATAGGACTGTTACTCAGGAT+TGG + chr5_2:25393157-25393176 Msa0764920:CDS 40.0%
TAGGACTGTTACTCAGGATT+GGG + chr5_2:25393158-25393177 Msa0764920:CDS 40.0%
! TTACTCAGGATTGGGTTTTG+TGG + chr5_2:25393166-25393185 Msa0764920:CDS 40.0%
!! TACTCAGGATTGGGTTTTGT+GGG + chr5_2:25393167-25393186 Msa0764920:CDS 40.0%
GAAAAGCTAGCAGAAACACT+AGG - chr5_2:25393288-25393307 None:intergenic 40.0%
!!! TGCTAGCTTTTCTAGACAAC+AGG + chr5_2:25393296-25393315 Msa0764920:CDS 40.0%
! AAGATGGTATTTGGAGCTTC+TGG - chr5_2:25393847-25393866 None:intergenic 40.0%
TACCATCTTCTATGCTAACG+TGG + chr5_2:25393858-25393877 Msa0764920:intron 40.0%
AACCACGTTAGCATAGAAGA+TGG - chr5_2:25393863-25393882 None:intergenic 40.0%
TACCATGTTGCTGAAGATGA+TGG + chr5_2:25394012-25394031 Msa0764920:CDS 40.0%
TTTCAAAGGGAATGGAGTTG+AGG + chr5_2:25394074-25394093 Msa0764920:CDS 40.0%
GGAATTGAGCAAGAAGATTG+AGG + chr5_2:25394095-25394114 Msa0764920:CDS 40.0%
AAGAAGATTGAGGAAGAGAC+AGG + chr5_2:25394105-25394124 Msa0764920:CDS 40.0%
AGAAGATTGAGGAAGAGACA+GGG + chr5_2:25394106-25394125 Msa0764920:CDS 40.0%
! CTGGCCTTTACATAACATGT+TGG + chr5_2:25394413-25394432 Msa0764920:intron 40.0%
TGGTTAGACTCTGCAATTTC+TGG + chr5_2:25394633-25394652 Msa0764920:intron 40.0%
!! TCTGGCTCTGGAAAATGTAT+TGG + chr5_2:25394651-25394670 Msa0764920:intron 40.0%
GCATTGTGCCCTGAAATATT+TGG + chr5_2:25394679-25394698 Msa0764920:intron 40.0%
! AAGCCAGATTTTGCAACACA+TGG + chr5_2:25394861-25394880 Msa0764920:CDS 40.0%
!! TGCAATGGACTATTACAAGG+CGG - chr5_2:25394976-25394995 None:intergenic 40.0%
GCTTGAAATTGCCATGGAAA+TGG + chr5_2:25395023-25395042 Msa0764920:three_prime_UTR 40.0%
AGGCTTCAAGATTGTTCTCT+AGG + chr5_2:25395089-25395108 Msa0764920:three_prime_UTR 40.0%
! CGGCGATAAGGTATTTGTCT+AGG - chr5_2:25387293-25387312 None:intergenic 45.0%
! GACTTTTCCGTTGTTGTCGT+CGG - chr5_2:25387313-25387332 None:intergenic 45.0%
AAAGTCCGTCAAAGCCGAAA+CGG + chr5_2:25387327-25387346 Msa0764920:CDS 45.0%
CCTGTTAGGGTTAAGGGATA+CGG - chr5_2:25387465-25387484 None:intergenic 45.0%
CCTCTTTCCTGTTAGGGTTA+AGG - chr5_2:25387472-25387491 None:intergenic 45.0%
CCTTAACCCTAACAGGAAAG+AGG + chr5_2:25387469-25387488 Msa0764920:CDS 45.0%
TGAAGCTGAGGAGTTGTTGT+GGG + chr5_2:25387565-25387584 Msa0764920:CDS 45.0%
!! GGGAGGTTTTTGAAGGGAAA+CGG + chr5_2:25387585-25387604 Msa0764920:CDS 45.0%
ATCGTTACACTGTTCCTCCA+CGG - chr5_2:25387621-25387640 None:intergenic 45.0%
! GGTGTTTTGTGGGATGTTGA+AGG + chr5_2:25387666-25387685 Msa0764920:CDS 45.0%
!! GTGGGATGTTGAAGGTGTTA+TGG + chr5_2:25387674-25387693 Msa0764920:CDS 45.0%
! CCGATGAGTGTTTTCTCACT+TGG + chr5_2:25387768-25387787 Msa0764920:CDS 45.0%
TACCTCGAATACTAGCCGAA+TGG + chr5_2:25388477-25388496 Msa0764920:intron 45.0%
! AGATTGGTCAAGAGGTATGC+TGG + chr5_2:25388880-25388899 Msa0764920:intron 45.0%
TAAGCTCAACAATCCAGGAG+TGG + chr5_2:25389048-25389067 Msa0764920:intron 45.0%
AAATTGCTGTATGCCACTCC+TGG - chr5_2:25389064-25389083 None:intergenic 45.0%
! CAGCAATTTTCCTTGTGTGG+GGG + chr5_2:25389075-25389094 Msa0764920:intron 45.0%
TAACTGGGCTGTTCACATCT+TGG - chr5_2:25389148-25389167 None:intergenic 45.0%
! TCTGGGGAAGCTTTTCTTGT+AGG + chr5_2:25389638-25389657 Msa0764920:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr5_2:25390142-25390161 None:intergenic 45.0%
! CACACATTGCCATTTGCATC+CGG + chr5_2:25390089-25390108 Msa0764920:intron 45.0%
! ACACATTGCCATTTGCATCC+GGG + chr5_2:25390090-25390109 Msa0764920:intron 45.0%
GTACTCATGGATGTGTTGTG+TGG - chr5_2:25390116-25390135 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr5_2:25390142-25390161 Msa0764920:intron 45.0%
AAAATTCGGGTGTTCACTCG+TGG + chr5_2:25390194-25390213 Msa0764920:intron 45.0%
GGAGCAGATATATATGGGTG+AGG - chr5_2:25390232-25390251 None:intergenic 45.0%
AACCGCACTCCTTAAGATTG+GGG + chr5_2:25390325-25390344 Msa0764920:intron 45.0%
TCCTTAAGATTGGGGACAAG+TGG + chr5_2:25390333-25390352 Msa0764920:intron 45.0%
ACCACTTGTCCCCAATCTTA+AGG - chr5_2:25390337-25390356 None:intergenic 45.0%
CTAGTCCATTCGCTCGTAAA+TGG - chr5_2:25390701-25390720 None:intergenic 45.0%
! CATTTACGAGCGAATGGACT+AGG + chr5_2:25390699-25390718 Msa0764920:intron 45.0%
TGCGTGATGTGGAAGATATG+AGG - chr5_2:25391047-25391066 None:intergenic 45.0%
TCACAAACACGTCAAGGCAA+CGG + chr5_2:25391188-25391207 Msa0764920:intron 45.0%
TAACACGTTTGGGTGAAAGG+AGG - chr5_2:25392427-25392446 None:intergenic 45.0%
! GTTGTAAAAGGGTGTAGTGG+TGG - chr5_2:25392587-25392606 None:intergenic 45.0%
GTTGGGTTTAGTTGTCTGCA+TGG - chr5_2:25392728-25392747 None:intergenic 45.0%
AAACCCAACAAGCTTCGAAG+CGG + chr5_2:25392739-25392758 Msa0764920:CDS 45.0%
! ATTCCGCTTCGAAGCTTGTT+GGG - chr5_2:25392745-25392764 None:intergenic 45.0%
CGGATAACGTTGTCGTAGTT+TGG - chr5_2:25392907-25392926 None:intergenic 45.0%
!! TGCCGTAACAGCTTTTGAGA+CGG - chr5_2:25392927-25392946 None:intergenic 45.0%
! ATGGAGTGTCTGATGCTGTT+AGG - chr5_2:25392954-25392973 None:intergenic 45.0%
TGTTGAATGGGAGCCTGTAA+GGG + chr5_2:25393035-25393054 Msa0764920:CDS 45.0%
TGAAGCTGAAGACGAGGTAT+GGG + chr5_2:25393070-25393089 Msa0764920:CDS 45.0%
TGACGCATGATATTCCGCAT+AGG + chr5_2:25393139-25393158 Msa0764920:CDS 45.0%
TCCTGAGTAACAGTCCTATG+CGG - chr5_2:25393156-25393175 None:intergenic 45.0%
GTTTCAAAAGCTGGAGCAGA+AGG - chr5_2:25393231-25393250 None:intergenic 45.0%
! GGCATGCTAGTTTCAAAAGC+TGG - chr5_2:25393240-25393259 None:intergenic 45.0%
AAGCTAGCAGAAACACTAGG+AGG - chr5_2:25393285-25393304 None:intergenic 45.0%
!! TTTGGAGCTTCTGGAACTCA+CGG - chr5_2:25393838-25393857 None:intergenic 45.0%
! CGAATGATGATGCATCACCT+AGG + chr5_2:25393965-25393984 Msa0764920:CDS 45.0%
TGATGCATCACCTAGGAAGA+TGG + chr5_2:25393972-25393991 Msa0764920:CDS 45.0%
CTCCATCATCTTCAGCAACA+TGG - chr5_2:25394017-25394036 None:intergenic 45.0%
GATGGAGAAGTGAGTGATGA+AGG + chr5_2:25394030-25394049 Msa0764920:CDS 45.0%
AGGTGTGCAGGGATATTCTT+TGG + chr5_2:25394050-25394069 Msa0764920:CDS 45.0%
TGTTTCAGTGGCAAGAGAGT+TGG + chr5_2:25394817-25394836 Msa0764920:intron 45.0%
AGGCCATGTGTTGCAAAATC+TGG - chr5_2:25394867-25394886 None:intergenic 45.0%
GAAGCAGCTTGAAATTGCCA+TGG + chr5_2:25395017-25395036 Msa0764920:three_prime_UTR 45.0%
!!! TTATTTTTTATTTTTGTTTT+TGG - chr5_2:25387184-25387203 None:intergenic 5.0%
!!! TTTTAAAAAAAATCAATTAT+AGG - chr5_2:25389997-25390016 None:intergenic 5.0%
!! GTTGTGTGTGTTGGTGACAC+TGG - chr5_2:25387134-25387153 None:intergenic 50.0%
CTTATCGCCGACGACAACAA+CGG + chr5_2:25387303-25387322 Msa0764920:CDS 50.0%
CCGTATCCCTTAACCCTAAC+AGG + chr5_2:25387462-25387481 Msa0764920:CDS 50.0%
GAATGGCAGCCAATACGTGA+CGG + chr5_2:25387534-25387553 Msa0764920:CDS 50.0%
AATGGCAGCCAATACGTGAC+GGG + chr5_2:25387535-25387554 Msa0764920:CDS 50.0%
ACCTGAAACCCGTCACGTAT+TGG - chr5_2:25387546-25387565 None:intergenic 50.0%
GTGAAGCTGAGGAGTTGTTG+TGG + chr5_2:25387564-25387583 Msa0764920:CDS 50.0%
GAGAAAACACTCATCGGCGA+CGG - chr5_2:25387765-25387784 None:intergenic 50.0%
ACCTGAAAACTTCCTCTCGC+CGG - chr5_2:25387804-25387823 None:intergenic 50.0%
GACCATTCGGCTAGTATTCG+AGG - chr5_2:25388482-25388501 None:intergenic 50.0%
GGGCCACACAAATGTACTCA+TGG - chr5_2:25390129-25390148 None:intergenic 50.0%
GTCCCCAATCTTAAGGAGTG+CGG - chr5_2:25390330-25390349 None:intergenic 50.0%
CGGTTGTGGTGTGAGACAAA+TGG - chr5_2:25391674-25391693 None:intergenic 50.0%
CATGTACGAGTCTACGGTTG+TGG - chr5_2:25391688-25391707 None:intergenic 50.0%
CGCTCTAATCACATGGCCAT+TGG - chr5_2:25391845-25391864 None:intergenic 50.0%
AAAAACCGTGACCCTTCCAC+AGG + chr5_2:25392317-25392336 Msa0764920:intron 50.0%
TTCTACCTGTGGAAGGGTCA+CGG - chr5_2:25392325-25392344 None:intergenic 50.0%
GGAAGGTTCTACCTGTGGAA+GGG - chr5_2:25392331-25392350 None:intergenic 50.0%
AGGAAGGTTCTACCTGTGGA+AGG - chr5_2:25392332-25392351 None:intergenic 50.0%
AGTGAGGAAGGTTCTACCTG+TGG - chr5_2:25392336-25392355 None:intergenic 50.0%
GTGAAAGGAGGCAATTGCGT+GGG - chr5_2:25392415-25392434 None:intergenic 50.0%
CATTCCGCTTCGAAGCTTGT+TGG - chr5_2:25392746-25392765 None:intergenic 50.0%
CAACAAGCTTCGAAGCGGAA+TGG + chr5_2:25392744-25392763 Msa0764920:CDS 50.0%
!!! GACGGACTGCTTTTGCTTTG+TGG - chr5_2:25392777-25392796 None:intergenic 50.0%
CCAGTCATGCCGAGAAGAAA+TGG - chr5_2:25392973-25392992 None:intergenic 50.0%
CCATTTCTTCTCGGCATGAC+TGG + chr5_2:25392970-25392989 Msa0764920:CDS 50.0%
CTGTTGAATGGGAGCCTGTA+AGG + chr5_2:25393034-25393053 Msa0764920:CDS 50.0%
ACACGAACACCATCCCTTAC+AGG - chr5_2:25393051-25393070 None:intergenic 50.0%
TTCGTGTGAAGCTGAAGACG+AGG + chr5_2:25393064-25393083 Msa0764920:CDS 50.0%
GTGAAGCTGAAGACGAGGTA+TGG + chr5_2:25393069-25393088 Msa0764920:CDS 50.0%
TGCGTCACAGTATTCCTCCA+CGG - chr5_2:25393126-25393145 None:intergenic 50.0%
TCCGCATAGGACTGTTACTC+AGG + chr5_2:25393152-25393171 Msa0764920:CDS 50.0%
TGCATCACCTAGGAAGATGG+AGG + chr5_2:25393975-25393994 Msa0764920:CDS 50.0%
GCATCACCTAGGAAGATGGA+GGG + chr5_2:25393976-25393995 Msa0764920:CDS 50.0%
CATCACCTAGGAAGATGGAG+GGG + chr5_2:25393977-25393996 Msa0764920:CDS 50.0%
! AGTGAGTGATGAAGGTGTGC+AGG + chr5_2:25394038-25394057 Msa0764920:CDS 50.0%
! GTGAGTGATGAAGGTGTGCA+GGG + chr5_2:25394039-25394058 Msa0764920:CDS 50.0%
TGAGGAAGAGACAGGGTTAG+AGG + chr5_2:25394113-25394132 Msa0764920:CDS 50.0%
GAGGAAGAGACAGGGTTAGA+GGG + chr5_2:25394114-25394133 Msa0764920:CDS 50.0%
!! GACTCTGCAATTTCTGGCTC+TGG + chr5_2:25394639-25394658 Msa0764920:intron 50.0%
TTCAGTGGCAAGAGAGTTGG+AGG + chr5_2:25394820-25394839 Msa0764920:intron 50.0%
CGTTGTTGTCGTCGGCGATA+AGG - chr5_2:25387305-25387324 None:intergenic 55.0%
! TGGCTCCGTTTCGGCTTTGA+CGG - chr5_2:25387335-25387354 None:intergenic 55.0%
!! GCCAATACGTGACGGGTTTC+AGG + chr5_2:25387542-25387561 Msa0764920:CDS 55.0%
! ACGGGTTTCAGGTGAAGCTG+AGG + chr5_2:25387553-25387572 Msa0764920:CDS 55.0%
AGCTGAGGAGTTGTTGTGGG+AGG + chr5_2:25387568-25387587 Msa0764920:CDS 55.0%
GAAACGGTAGTAATCCGCCG+TGG + chr5_2:25387601-25387620 Msa0764920:CDS 55.0%
GTTACACTGTTCCTCCACGG+CGG - chr5_2:25387618-25387637 None:intergenic 55.0%
TGAAAACTTCCTCTCGCCGG+CGG - chr5_2:25387801-25387820 None:intergenic 55.0%
GCACATTGCACGCGTCAACT+AGG + chr5_2:25387960-25387979 Msa0764920:intron 55.0%
CGAAGAAACTCCCCCACACA+AGG - chr5_2:25389088-25389107 None:intergenic 55.0%
TTGTGTGGCCCGGATGCAAA+TGG - chr5_2:25390101-25390120 None:intergenic 55.0%
CATGGATGTGTTGTGTGGCC+CGG - chr5_2:25390111-25390130 None:intergenic 55.0%
TGTGTCGTCGTGAGTGAGGA+AGG - chr5_2:25392348-25392367 None:intergenic 55.0%
AGGCAATTGCGTGGGTGAAG+CGG - chr5_2:25392407-25392426 None:intergenic 55.0%
GGTGAAAGGAGGCAATTGCG+TGG - chr5_2:25392416-25392435 None:intergenic 55.0%
! TGTCGTGGTGGCTTCTGAGA+CGG - chr5_2:25392795-25392814 None:intergenic 55.0%
GAATGGGAGCCTGTAAGGGA+TGG + chr5_2:25393039-25393058 Msa0764920:CDS 55.0%
GTCACAGTATTCCTCCACGG+TGG - chr5_2:25393123-25393142 None:intergenic 55.0%
TAGCATGCCTTCTCCTGCTG+TGG + chr5_2:25393251-25393270 Msa0764920:CDS 55.0%
ATTCGCCCCTCCATCTTCCT+AGG - chr5_2:25393985-25394004 None:intergenic 55.0%
GGAGGAAGCTGCAAACGAAG+AGG - chr5_2:25394183-25394202 None:intergenic 55.0%
TGTCACGGTCACAATGTGCG+TGG + chr5_2:25394613-25394632 Msa0764920:intron 55.0%
! GCAAGAGAGTTGGAGGCACA+AGG + chr5_2:25394827-25394846 Msa0764920:CDS 55.0%
ACGGTAGTAATCCGCCGTGG+AGG + chr5_2:25387604-25387623 Msa0764920:CDS 60.0%
! GCCGGCGAGAGGAAGTTTTC+AGG + chr5_2:25387800-25387819 Msa0764920:CDS 60.0%
TGCGTGTGTCGTCGTGAGTG+AGG - chr5_2:25392352-25392371 None:intergenic 60.0%
GGCAATTGCGTGGGTGAAGC+GGG - chr5_2:25392406-25392425 None:intergenic 60.0%
CATGCCTTCTCCTGCTGTGG+CGG + chr5_2:25393254-25393273 Msa0764920:CDS 60.0%
!! GGAATGGTGGGTTGCCACCG+TGG + chr5_2:25393106-25393125 Msa0764920:CDS 65.0%
!! ATGGTGGGTTGCCACCGTGG+AGG + chr5_2:25393109-25393128 Msa0764920:CDS 65.0%
GCAACCGCCACAGCAGGAGA+AGG - chr5_2:25393261-25393280 None:intergenic 65.0%
CTCACTTGGGTCGTCGCCGC+CGG + chr5_2:25387782-25387801 Msa0764920:CDS 70.0%
GGAGGAGCAACCGCCACAGC+AGG - chr5_2:25393267-25393286 None:intergenic 70.0%
! GGGTCGTCGCCGCCGGCGAG+AGG + chr5_2:25387789-25387808 Msa0764920:CDS 85.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 25387070 25395247 25387070 ID=Msa0764920;Name=Msa0764920
chr5_2 mRNA 25387070 25395247 25387070 ID=Msa0764920-mRNA-1;Parent=Msa0764920;Name=Msa0764920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=176|0.5|0.8|0.8|0.5|0.8|5|285|543
chr5_2 exon 25387070 25387821 25387070 ID=Msa0764920-mRNA-1:exon:10232;Parent=Msa0764920-mRNA-1
chr5_2 exon 25392733 25393317 25392733 ID=Msa0764920-mRNA-1:exon:10233;Parent=Msa0764920-mRNA-1
chr5_2 exon 25393964 25394249 25393964 ID=Msa0764920-mRNA-1:exon:10234;Parent=Msa0764920-mRNA-1
chr5_2 exon 25394680 25394726 25394680 ID=Msa0764920-mRNA-1:exon:10235;Parent=Msa0764920-mRNA-1
chr5_2 exon 25394825 25395247 25394825 ID=Msa0764920-mRNA-1:exon:10236;Parent=Msa0764920-mRNA-1
chr5_2 five_prime_UTR 25387070 25387245 25387070 ID=Msa0764920-mRNA-1:five_prime_utr;Parent=Msa0764920-mRNA-1
chr5_2 CDS 25387246 25387821 25387246 ID=Msa0764920-mRNA-1:cds;Parent=Msa0764920-mRNA-1
chr5_2 CDS 25392733 25393317 25392733 ID=Msa0764920-mRNA-1:cds;Parent=Msa0764920-mRNA-1
chr5_2 CDS 25393964 25394249 25393964 ID=Msa0764920-mRNA-1:cds;Parent=Msa0764920-mRNA-1
chr5_2 CDS 25394680 25394726 25394680 ID=Msa0764920-mRNA-1:cds;Parent=Msa0764920-mRNA-1
chr5_2 CDS 25394825 25394962 25394825 ID=Msa0764920-mRNA-1:cds;Parent=Msa0764920-mRNA-1
chr5_2 three_prime_UTR 25394963 25395247 25394963 ID=Msa0764920-mRNA-1:three_prime_utr;Parent=Msa0764920-mRNA-1
Gene Sequence

>Msa0764920

ATGGAATATTTCACCAAATCAAAGATCATTAAGCTCAAAAGCCACCTAGACAAATACCTTATCGCCGACGACAACAACGGAAAAGTCCGTCAAAGCCGAAACGGAGCCATTAAAAGAGCTCAATGGACAGTGGAGATAGTGCAAAAACTACAAACTCATAACCAAGTAATAAGGTTAAAGAGTCACAACGGAAAATATTTAACGGCGACAGAAACACCGTATCCCTTAACCCTAACAGGAAAGAGGGTAATATTAACGGAGTTAGAAAACGGTGTAGATGGTAAAAACGAATGGCAGCCAATACGTGACGGGTTTCAGGTGAAGCTGAGGAGTTGTTGTGGGAGGTTTTTGAAGGGAAACGGTAGTAATCCGCCGTGGAGGAACAGTGTAACGATTGATGATTCGTTTGTGAAAATGGAGGGTGTTTTGTGGGATGTTGAAGGTGTTATGGAAGATGAGTTTGAGAGTTTGTTATCTTCTTTTGGTTCTGATGATGTTTCTTTTGCGTCGGATATTCCGTCGCCGATGAGTGTTTTCTCACTTGGGTCGTCGCCGCCGGCGAGAGGAAGTTTTCAGACAACTAAACCCAACAAGCTTCGAAGCGGAATGGACTTCTTCCACAAAGCAAAAGCAGTCCGTCTCAGAAGCCACCACGACAAATATCTCTTAGCAGAAGAAGATGAAGAATCCGTTTCACAAGGAAGAAACGGTTCATCAAACAACGCAAGATGGTACGTAGAATATGTCCCAAACTACGACAACGTTATCCGTCTCAAAAGCTGTTACGGCAAATACCTAACAGCATCAGACACTCCATTTCTTCTCGGCATGACTGGTCGAAAAGTGCTTCAAACTAGTCCAAAGACTTTGGATTCTTCTGTTGAATGGGAGCCTGTAAGGGATGGTGTTCGTGTGAAGCTGAAGACGAGGTATGGGAATTTTCTTAGAGGGAATGGTGGGTTGCCACCGTGGAGGAATACTGTGACGCATGATATTCCGCATAGGACTGTTACTCAGGATTGGGTTTTGTGGGATGTTGATGTTGTTGAGATTCATGTTAGTAAACAACAACCTTCTGCTCCAGCTTTTGAAACTAGCATGCCTTCTCCTGCTGTGGCGGTTGCTCCTCCTAGTGTTTCTGCTAGCTTTTCTAGACAACAGTCGAATGATGATGCATCACCTAGGAAGATGGAGGGGCGAATTATATACTACCATGTTGCTGAAGATGATGGAGAAGTGAGTGATGAAGGTGTGCAGGGATATTCTTTGGTTTTCAAAGGGAATGGAGTTGAGGAATTGAGCAAGAAGATTGAGGAAGAGACAGGGTTAGAGGGAATCATTGTGTGTACTAAGAGTCCTTTGAATGGAAAGCTTTATCCTCTTCGTTTGCAGCTTCCTCCAAATAATGTTACTATGCAGGTTGTTTTGGTTCTTCCTTTCTCAAAAGCATTGTGCCCTGAAATATTTGGTTGTTCTGATTTGAGTGCTTGCATTTGGCAAGAGAGTTGGAGGCACAAGGTTATCTTTGAGAAGCCAGATTTTGCAACACATGGCCTTTGTACATACTACATACTGATTCAAGCTTCTGAGAGTTATATGTTAAAATATTTAGGATTCGAGAATGTGTTATAG

Protein sequence

>Msa0764920

MEYFTKSKIIKLKSHLDKYLIADDNNGKVRQSRNGAIKRAQWTVEIVQKLQTHNQVIRLKSHNGKYLTATETPYPLTLTGKRVILTELENGVDGKNEWQPIRDGFQVKLRSCCGRFLKGNGSNPPWRNSVTIDDSFVKMEGVLWDVEGVMEDEFESLLSSFGSDDVSFASDIPSPMSVFSLGSSPPARGSFQTTKPNKLRSGMDFFHKAKAVRLRSHHDKYLLAEEDEESVSQGRNGSSNNARWYVEYVPNYDNVIRLKSCYGKYLTASDTPFLLGMTGRKVLQTSPKTLDSSVEWEPVRDGVRVKLKTRYGNFLRGNGGLPPWRNTVTHDIPHRTVTQDWVLWDVDVVEIHVSKQQPSAPAFETSMPSPAVAVAPPSVSASFSRQQSNDDASPRKMEGRIIYYHVAEDDGEVSDEGVQGYSLVFKGNGVEELSKKIEEETGLEGIIVCTKSPLNGKLYPLRLQLPPNNVTMQVVLVLPFSKALCPEIFGCSDLSACIWQESWRHKVIFEKPDFATHGLCTYYILIQASESYMLKYLGFENVL*