Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421210 | sp|O03376|AOX3_SOYBN | 83.939 | 330 | 48 | 4 | 1 | 329 | 1 | 326 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421210 | S5FR94 | 99.696 | 329 | 1 | 0 | 1 | 329 | 1 | 329 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1421210 | 0.815949 | 7.110922e-52 | -8.615850e-47 |
| Msa0007470 | Msa1421210 | 0.843176 | 1.645879e-58 | -8.615850e-47 |
| Msa0010800 | Msa1421210 | 0.806973 | 6.340387e-50 | -8.615850e-47 |
| Msa0012710 | Msa1421210 | 0.801006 | 1.103398e-48 | -8.615850e-47 |
| Msa0015090 | Msa1421210 | 0.819612 | 1.060181e-52 | -8.615850e-47 |
| Msa0017320 | Msa1421210 | 0.839813 | 1.265753e-57 | -8.615850e-47 |
| Msa0049750 | Msa1421210 | 0.811556 | 6.599318e-51 | -8.615850e-47 |
| Msa0049910 | Msa1421210 | 0.826243 | 3.019519e-54 | -8.615850e-47 |
| Msa0055640 | Msa1421210 | 0.815441 | 9.232685e-52 | -8.615850e-47 |
| Msa0056060 | Msa1421210 | 0.825421 | 4.731644e-54 | -8.615850e-47 |
| Msa0060070 | Msa1421210 | 0.825703 | 4.055481e-54 | -8.615850e-47 |
| Msa0090970 | Msa1421210 | 0.811273 | 7.602898e-51 | -8.615850e-47 |
| Msa0111080 | Msa1421210 | 0.823933 | 1.060907e-53 | -8.615850e-47 |
| Msa0119440 | Msa1421210 | 0.816050 | 6.751069e-52 | -8.615850e-47 |
| Msa1352660 | Msa1421210 | 0.840962 | 6.339064e-58 | -8.615850e-47 |
| Msa1355510 | Msa1421210 | 0.801189 | 1.012563e-48 | -8.615850e-47 |
| Msa1355890 | Msa1421210 | 0.834380 | 3.099403e-56 | -8.615850e-47 |
| Msa1360020 | Msa1421210 | 0.815568 | 8.648486e-52 | -8.615850e-47 |
| Msa1382020 | Msa1421210 | 0.818847 | 1.583065e-52 | -8.615850e-47 |
| Msa1388830 | Msa1421210 | 0.837041 | 6.567644e-57 | -8.615850e-47 |
| Msa1411410 | Msa1421210 | 0.808357 | 3.222179e-50 | -8.615850e-47 |
| Msa1421210 | Msa1422810 | 0.807267 | 5.493563e-50 | -8.615850e-47 |
| Msa1421210 | Msa1423540 | 0.822209 | 2.676977e-53 | -8.615850e-47 |
| Msa1421210 | Msa1423820 | 0.806752 | 7.061281e-50 | -8.615850e-47 |
| Msa1421210 | Msa1428780 | 0.805877 | 1.079423e-49 | -8.615850e-47 |
| Msa1421210 | Msa1430130 | 0.833970 | 3.926616e-56 | -8.615850e-47 |
| Msa1421210 | Msa1438840 | 0.838950 | 2.120060e-57 | -8.615850e-47 |
| Msa1421210 | Msa1460750 | 0.834414 | 3.039851e-56 | -8.615850e-47 |
| Msa1421210 | Msa1462470 | 0.804921 | 1.712592e-49 | -8.615850e-47 |
| Msa0631320 | Msa1421210 | 0.836911 | 7.088780e-57 | -8.615850e-47 |
| Msa0654620 | Msa1421210 | 0.805779 | 1.132250e-49 | -8.615850e-47 |
| Msa0657120 | Msa1421210 | 0.825219 | 5.282105e-54 | -8.615850e-47 |
| Msa0658680 | Msa1421210 | 0.810035 | 1.408186e-50 | -8.615850e-47 |
| Msa0659790 | Msa1421210 | 0.820749 | 5.819034e-53 | -8.615850e-47 |
| Msa0679810 | Msa1421210 | 0.807849 | 4.134431e-50 | -8.615850e-47 |
| Msa0692650 | Msa1421210 | 0.802947 | 4.404035e-49 | -8.615850e-47 |
| Msa0701100 | Msa1421210 | 0.823325 | 1.472021e-53 | -8.615850e-47 |
| Msa0724370 | Msa1421210 | 0.843288 | 1.536816e-58 | -8.615850e-47 |
| Msa0742150 | Msa1421210 | 0.815616 | 8.436894e-52 | -8.615850e-47 |
| Msa0764920 | Msa1421210 | 0.850595 | 1.534299e-60 | -8.615850e-47 |
| Msa0769720 | Msa1421210 | 0.810588 | 1.069753e-50 | -8.615850e-47 |
| Msa0775560 | Msa1421210 | 0.940516 | 2.041875e-100 | -8.615850e-47 |
| Msa0786070 | Msa1421210 | 0.822379 | 2.444188e-53 | -8.615850e-47 |
| Msa0805920 | Msa1421210 | 0.811279 | 7.581705e-51 | -8.615850e-47 |
| Msa0812950 | Msa1421210 | 0.918302 | 1.842281e-86 | -8.615850e-47 |
| Msa0129690 | Msa1421210 | 0.807525 | 4.844797e-50 | -8.615850e-47 |
| Msa0136630 | Msa1421210 | 0.822285 | 2.570528e-53 | -8.615850e-47 |
| Msa0138900 | Msa1421210 | 0.807640 | 4.580428e-50 | -8.615850e-47 |
| Msa0142500 | Msa1421210 | 0.818830 | 1.596908e-52 | -8.615850e-47 |
| Msa0152560 | Msa1421210 | 0.823936 | 1.058739e-53 | -8.615850e-47 |
| Msa0154920 | Msa1421210 | 0.812163 | 4.866789e-51 | -8.615850e-47 |
| Msa0171980 | Msa1421210 | 0.806545 | 7.808362e-50 | -8.615850e-47 |
| Msa0176260 | Msa1421210 | 0.810693 | 1.015458e-50 | -8.615850e-47 |
| Msa0187490 | Msa1421210 | 0.815092 | 1.103547e-51 | -8.615850e-47 |
| Msa0189030 | Msa1421210 | 0.815430 | 9.280591e-52 | -8.615850e-47 |
| Msa0189610 | Msa1421210 | 0.801591 | 8.375888e-49 | -8.615850e-47 |
| Msa0196670 | Msa1421210 | 0.810572 | 1.078152e-50 | -8.615850e-47 |
| Msa0196880 | Msa1421210 | 0.801378 | 9.263313e-49 | -8.615850e-47 |
| Msa0227360 | Msa1421210 | 0.812014 | 5.244843e-51 | -8.615850e-47 |
| Msa1225580 | Msa1421210 | 0.820710 | 5.939754e-53 | -8.615850e-47 |
| Msa1229480 | Msa1421210 | 0.826125 | 3.219954e-54 | -8.615850e-47 |
| Msa1239400 | Msa1421210 | 0.802799 | 4.725114e-49 | -8.615850e-47 |
| Msa1250110 | Msa1421210 | 0.807544 | 4.800344e-50 | -8.615850e-47 |
| Msa1259530 | Msa1421210 | 0.803445 | 3.474322e-49 | -8.615850e-47 |
| Msa1260680 | Msa1421210 | 0.835509 | 1.609889e-56 | -8.615850e-47 |
| Msa1266170 | Msa1421210 | 0.814692 | 1.353814e-51 | -8.615850e-47 |
| Msa1270660 | Msa1421210 | 0.810287 | 1.242286e-50 | -8.615850e-47 |
| Msa1279480 | Msa1421210 | 0.803416 | 3.522193e-49 | -8.615850e-47 |
| Msa1280170 | Msa1421210 | 0.840213 | 9.953368e-58 | -8.615850e-47 |
| Msa1307180 | Msa1421210 | 0.829710 | 4.419607e-55 | -8.615850e-47 |
| Msa1309760 | Msa1421210 | 0.802832 | 4.651756e-49 | -8.615850e-47 |
| Msa1316360 | Msa1421210 | 0.829337 | 5.448115e-55 | -8.615850e-47 |
| Msa1335230 | Msa1421210 | 0.821308 | 4.326970e-53 | -8.615850e-47 |
| Msa0364790 | Msa1421210 | 0.861651 | 8.831449e-64 | -8.615850e-47 |
| Msa0365950 | Msa1421210 | 0.802488 | 5.479051e-49 | -8.615850e-47 |
| Msa0378010 | Msa1421210 | 0.829283 | 5.612043e-55 | -8.615850e-47 |
| Msa0380600 | Msa1421210 | 0.812638 | 3.834018e-51 | -8.615850e-47 |
| Msa0388730 | Msa1421210 | 0.802652 | 5.068196e-49 | -8.615850e-47 |
| Msa0403490 | Msa1421210 | 0.817224 | 3.685108e-52 | -8.615850e-47 |
| Msa0412260 | Msa1421210 | 0.806803 | 6.888474e-50 | -8.615850e-47 |
| Msa0418400 | Msa1421210 | 0.802740 | 4.861610e-49 | -8.615850e-47 |
| Msa0427580 | Msa1421210 | 0.844475 | 7.387972e-59 | -8.615850e-47 |
| Msa0430240 | Msa1421210 | 0.811879 | 5.614421e-51 | -8.615850e-47 |
| Msa0448610 | Msa1421210 | 0.818597 | 1.804211e-52 | -8.615850e-47 |
| Msa0456770 | Msa1421210 | 0.852765 | 3.723136e-61 | -8.615850e-47 |
| Msa0994370 | Msa1421210 | 0.816788 | 4.616108e-52 | -8.615850e-47 |
| Msa1006730 | Msa1421210 | 0.805427 | 1.341941e-49 | -8.615850e-47 |
| Msa1013070 | Msa1421210 | 0.845110 | 4.980367e-59 | -8.615850e-47 |
| Msa1023300 | Msa1421210 | 0.841295 | 5.183052e-58 | -8.615850e-47 |
| Msa1023310 | Msa1421210 | 0.866098 | 3.654242e-65 | -8.615850e-47 |
| Msa1054510 | Msa1421210 | 0.819450 | 1.154108e-52 | -8.615850e-47 |
| Msa1062020 | Msa1421210 | 0.803101 | 4.094396e-49 | -8.615850e-47 |
| Msa1062030 | Msa1421210 | 0.801413 | 9.111479e-49 | -8.615850e-47 |
| Msa1062040 | Msa1421210 | 0.869061 | 4.104332e-66 | -8.615850e-47 |
| Msa1094280 | Msa1421210 | 0.818129 | 2.302750e-52 | -8.615850e-47 |
| Msa1107190 | Msa1421210 | 0.809485 | 1.848386e-50 | -8.615850e-47 |
| Msa0240270 | Msa1421210 | 0.817066 | 3.998337e-52 | -8.615850e-47 |
| Msa0264680 | Msa1421210 | 0.801908 | 7.212973e-49 | -8.615850e-47 |
| Msa0276100 | Msa1421210 | 0.804405 | 2.194897e-49 | -8.615850e-47 |
| Msa0276430 | Msa1421210 | 0.824598 | 7.399278e-54 | -8.615850e-47 |
| Msa0284450 | Msa1421210 | 0.801461 | 8.906203e-49 | -8.615850e-47 |
| Msa0302730 | Msa1421210 | 0.832341 | 9.989245e-56 | -8.615850e-47 |
| Msa0302840 | Msa1421210 | 0.820374 | 7.093623e-53 | -8.615850e-47 |
| Msa0305620 | Msa1421210 | 0.800507 | 1.395500e-48 | -8.615850e-47 |
| Msa0309270 | Msa1421210 | 0.809673 | 1.684162e-50 | -8.615850e-47 |
| Msa0316470 | Msa1421210 | 0.801520 | 8.660222e-49 | -8.615850e-47 |
| Msa0319290 | Msa1421210 | 0.800115 | 1.676756e-48 | -8.615850e-47 |
| Msa0331020 | Msa1421210 | 0.803743 | 3.013366e-49 | -8.615850e-47 |
| Msa0347750 | Msa1421210 | 0.804714 | 1.891820e-49 | -8.615850e-47 |
| Msa1107200 | Msa1421210 | 0.883542 | 4.110013e-71 | -8.615850e-47 |
| Msa1107260 | Msa1421210 | 0.812774 | 3.579181e-51 | -8.615850e-47 |
| Msa1109810 | Msa1421210 | 0.812558 | 3.990689e-51 | -8.615850e-47 |
| Msa1150780 | Msa1421210 | 0.858084 | 1.050031e-62 | -8.615850e-47 |
| Msa1150790 | Msa1421210 | 0.802076 | 6.659698e-49 | -8.615850e-47 |
| Msa1150800 | Msa1421210 | 0.842508 | 2.478019e-58 | -8.615850e-47 |
| Msa1150810 | Msa1421210 | 0.842279 | 2.848978e-58 | -8.615850e-47 |
| Msa1176200 | Msa1421210 | 0.800585 | 1.345127e-48 | -8.615850e-47 |
| Msa1183140 | Msa1421210 | 0.823644 | 1.239371e-53 | -8.615850e-47 |
| Msa1187590 | Msa1421210 | 0.804209 | 2.411333e-49 | -8.615850e-47 |
| Msa1197070 | Msa1421210 | 0.827670 | 1.375953e-54 | -8.615850e-47 |
| Msa1208380 | Msa1421210 | 0.823707 | 1.198293e-53 | -8.615850e-47 |
| Msa1209190 | Msa1421210 | 0.812690 | 3.734168e-51 | -8.615850e-47 |
| Msa1209860 | Msa1421210 | 0.833192 | 6.141872e-56 | -8.615850e-47 |
| Msa1214170 | Msa1421210 | 0.817261 | 3.613501e-52 | -8.615850e-47 |
| Msa1220880 | Msa1421210 | 0.820814 | 5.622704e-53 | -8.615850e-47 |
| Msa0496970 | Msa1421210 | 0.823745 | 1.174029e-53 | -8.615850e-47 |
| Msa0518170 | Msa1421210 | 0.853677 | 2.039730e-61 | -8.615850e-47 |
| Msa0534870 | Msa1421210 | 0.829975 | 3.810698e-55 | -8.615850e-47 |
| Msa0545290 | Msa1421210 | 0.805705 | 1.173110e-49 | -8.615850e-47 |
| Msa0566350 | Msa1421210 | 0.809894 | 1.509771e-50 | -8.615850e-47 |
| Msa0566750 | Msa1421210 | 0.804102 | 2.538164e-49 | -8.615850e-47 |
| Msa0569780 | Msa1421210 | 0.813560 | 2.406853e-51 | -8.615850e-47 |
| Msa0600890 | Msa1421210 | 0.808771 | 2.629204e-50 | -8.615850e-47 |
| Msa0844610 | Msa1421210 | 0.843143 | 1.680029e-58 | -8.615850e-47 |
| Msa0853440 | Msa1421210 | 0.997882 | 3.418240e-251 | -8.615850e-47 |
| Msa0862280 | Msa1421210 | 0.814458 | 1.524679e-51 | -8.615850e-47 |
| Msa0877710 | Msa1421210 | 0.802601 | 5.191262e-49 | -8.615850e-47 |
| Msa0882400 | Msa1421210 | 0.849852 | 2.478330e-60 | -8.615850e-47 |
| Msa0947480 | Msa1421210 | 0.855541 | 5.886826e-62 | -8.615850e-47 |
| Msa0970480 | Msa1421210 | 0.824267 | 8.856161e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421210 | MtrunA17_Chr5g0430011 | 95.137 | 329 | 11 | 1 | 1 | 329 | 1 | 324 | 0.0 | 629 |
| Msa1421210 | MtrunA17_Chr5g0430001 | 90.274 | 329 | 26 | 2 | 1 | 329 | 1 | 323 | 0.0 | 616 |
| Msa1421210 | MtrunA17_Chr4g0050421 | 69.497 | 318 | 86 | 3 | 22 | 329 | 29 | 345 | 1.27e-165 | 464 |
| Msa1421210 | MtrunA17_Chr5g0409121 | 63.475 | 282 | 100 | 1 | 51 | 329 | 49 | 330 | 1.42e-139 | 398 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421210 | AT5G64210.1 | 67.586 | 290 | 86 | 3 | 44 | 329 | 68 | 353 | 1.17e-148 | 422 |
| Msa1421210 | AT3G22370.1 | 66.423 | 274 | 92 | 0 | 56 | 329 | 81 | 354 | 1.98e-144 | 412 |
| Msa1421210 | AT3G22360.1 | 64.029 | 278 | 100 | 0 | 52 | 329 | 48 | 325 | 4.99e-141 | 402 |
| Msa1421210 | AT1G32350.1 | 58.360 | 317 | 126 | 1 | 19 | 329 | 2 | 318 | 2.25e-137 | 392 |
| Msa1421210 | AT3G27620.1 | 66.538 | 260 | 87 | 0 | 70 | 329 | 70 | 329 | 4.06e-137 | 392 |
| Msa1421210 | AT1G32350.2 | 57.383 | 298 | 121 | 1 | 19 | 310 | 2 | 299 | 1.43e-125 | 362 |
| Msa1421210 | AT4G22260.1 | 30.729 | 192 | 109 | 5 | 132 | 302 | 111 | 299 | 5.08e-14 | 72.4 |
Find 93 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTATTGCAATTGATTAT+TGG | 0.137756 | tig0024918:-68270 | Msa1421210:CDS |
| CTTTCAATTCCTTTCCTTGA+TGG | 0.150163 | tig0024918:+67463 | None:intergenic |
| TATCAGAAATGTCTTAATTT+TGG | 0.157555 | tig0024918:-67120 | Msa1421210:three_prime_UTR |
| TTTATACATGCAACAAATTT+AGG | 0.164623 | tig0024918:+70133 | None:intergenic |
| TTGTGTATTGATAAACTTTC+AGG | 0.169243 | tig0024918:+67276 | None:intergenic |
| ACATAGATTTGTTGGTTATT+TGG | 0.210434 | tig0024918:-68368 | Msa1421210:CDS |
| CCTTCCTCGACCTTTCTTCT+TGG | 0.219102 | tig0024918:-70226 | Msa1421210:five_prime_UTR |
| TCAGATCTGTCAAGTTTCTA+AGG | 0.232736 | tig0024918:-69020 | Msa1421210:CDS |
| ACGCCGTTGTTTCGAGTTAC+TGG | 0.248772 | tig0024918:-69828 | Msa1421210:CDS |
| AATCAATATTAGTTTGGCTT+TGG | 0.327980 | tig0024918:-67164 | Msa1421210:three_prime_UTR |
| GCTCTCTGATTTGTATTTCA+AGG | 0.339484 | tig0024918:-68995 | Msa1421210:intron |
| AAAATAGCACATAGATTTGT+TGG | 0.354084 | tig0024918:-68376 | Msa1421210:CDS |
| AGCATCCCTCCCACCATTCC+AGG | 0.354203 | tig0024918:+68598 | None:intergenic |
| TAATTACTGCAGGAACGATA+TGG | 0.355715 | tig0024918:-68658 | Msa1421210:intron |
| CCACCAAACAATTCCTTGAT+TGG | 0.358528 | tig0024918:+67243 | None:intergenic |
| TAGTAAAATCAATATTAGTT+TGG | 0.365413 | tig0024918:-67170 | Msa1421210:three_prime_UTR |
| CACCCAATCAAGGAATTGTT+TGG | 0.379891 | tig0024918:-67246 | Msa1421210:three_prime_UTR |
| CAGTAGGCCTAAGGTTCTTA+AGG | 0.396717 | tig0024918:-69800 | Msa1421210:CDS |
| GGTGATGATCATCTATCTAC+AGG | 0.406891 | tig0024918:-67216 | Msa1421210:three_prime_UTR |
| CGCCGTTGTTTCGAGTTACT+GGG | 0.409023 | tig0024918:-69827 | Msa1421210:CDS |
| AAGGAATTGTTTGGTGGTCT+TGG | 0.413681 | tig0024918:-67237 | Msa1421210:three_prime_UTR |
| TCCTAAGGATGCAACGCTTA+AGG | 0.426108 | tig0024918:-68242 | Msa1421210:CDS |
| CGAGCTTTGTTCCGCAGTGG+TGG | 0.429833 | tig0024918:-70024 | Msa1421210:CDS |
| GTGCTGATGAGGCTCATCAT+AGG | 0.433399 | tig0024918:-68201 | Msa1421210:CDS |
| AAAAGCCTCTCATGCCAACT+TGG | 0.437573 | tig0024918:+68460 | None:intergenic |
| GTGCTTGTGGAAGCTTGTAC+TGG | 0.442938 | tig0024918:-69936 | Msa1421210:CDS |
| CACCAAACAATTCCTTGATT+GGG | 0.444770 | tig0024918:+67244 | None:intergenic |
| TCCTTAAGCGTTGCATCCTT+AGG | 0.446034 | tig0024918:+68241 | None:intergenic |
| TGCAATTGAAAGTGGTAAAG+TGG | 0.449348 | tig0024918:-68308 | Msa1421210:CDS |
| GAAACAATAGCAGCTGTCCC+TGG | 0.459329 | tig0024918:-68616 | Msa1421210:CDS |
| AAGTTGGCATGAGAGGCTTT+TGG | 0.469081 | tig0024918:-68458 | Msa1421210:CDS |
| CAGATCTGTCAAGTTTCTAA+GGG | 0.482561 | tig0024918:-69019 | Msa1421210:CDS |
| TTGTAGGATATTCACCATCA+AGG | 0.489202 | tig0024918:-67477 | Msa1421210:intron |
| CAATGATAACCAACAGGAGC+TGG | 0.493882 | tig0024918:+67435 | None:intergenic |
| CCATCCTCCTTAAGAACCTT+AGG | 0.498410 | tig0024918:+69793 | None:intergenic |
| CTAAGAAAATTTCAACATGC+TGG | 0.498550 | tig0024918:-68559 | Msa1421210:CDS |
| CATTTAGATGCAATTGAAAG+TGG | 0.503861 | tig0024918:-68316 | Msa1421210:CDS |
| CAATAATCAATTGCAATAGC+AGG | 0.503907 | tig0024918:+68271 | None:intergenic |
| GTGGCCATGGAACTGCTTCA+TGG | 0.504226 | tig0024918:-69764 | Msa1421210:intron |
| AATTTCAACATGCTGGTGGT+TGG | 0.505111 | tig0024918:-68552 | Msa1421210:CDS |
| TTGGAGTTACCTTGTCCTTG+TGG | 0.506908 | tig0024918:-70207 | Msa1421210:five_prime_UTR |
| ATGACTCAATGATAACCAAC+AGG | 0.508368 | tig0024918:+67429 | None:intergenic |
| AGGGATGATGCTTCACAGAA+TGG | 0.509926 | tig0024918:-67196 | Msa1421210:three_prime_UTR |
| CGAGTTACTGGGGTATCAGT+AGG | 0.516108 | tig0024918:-69816 | Msa1421210:CDS |
| TTGAAGAAGCAGAGAATGAA+AGG | 0.517469 | tig0024918:-68516 | Msa1421210:CDS |
| AGGATGGAACTGAGTGGCCA+TGG | 0.518415 | tig0024918:-69777 | Msa1421210:CDS |
| TAGATTTGTTGGTTATTTGG+AGG | 0.518817 | tig0024918:-68365 | Msa1421210:CDS |
| TGCTGATGAGGCTCATCATA+GGG | 0.523825 | tig0024918:-68200 | Msa1421210:CDS |
| TGAAACCAAGTTGGCATGAG+AGG | 0.527939 | tig0024918:-68465 | Msa1421210:CDS |
| CAATATCTCTCACCCAATCA+AGG | 0.528829 | tig0024918:-67256 | Msa1421210:three_prime_UTR |
| TGATTATTGGAGACTTCCTA+AGG | 0.530834 | tig0024918:-68257 | Msa1421210:CDS |
| CCTAAGGTTCTTAAGGAGGA+TGG | 0.531919 | tig0024918:-69793 | Msa1421210:CDS |
| AGCAGCTGTCCCTGGAATGG+TGG | 0.537892 | tig0024918:-68608 | Msa1421210:CDS |
| CAGCATGGCGGTGGTGCTTG+TGG | 0.537975 | tig0024918:-69949 | Msa1421210:CDS |
| CACTGTTATTCGTGCTGATG+AGG | 0.539250 | tig0024918:-68212 | Msa1421210:CDS |
| CTGTCCCTGGAATGGTGGGA+GGG | 0.543809 | tig0024918:-68603 | Msa1421210:CDS |
| CTGGGGTATCAGTAGGCCTA+AGG | 0.544437 | tig0024918:-69809 | Msa1421210:CDS |
| CCGCCATGCTGATGTTGTCT+CGG | 0.548514 | tig0024918:+69961 | None:intergenic |
| AGACAACATCAGCATGGCGG+TGG | 0.550470 | tig0024918:-69958 | Msa1421210:CDS |
| CCAATCAAGGAATTGTTTGG+TGG | 0.552609 | tig0024918:-67243 | Msa1421210:three_prime_UTR |
| TTTGGTTATTACTGCACAAG+GGG | 0.555806 | tig0024918:-68440 | Msa1421210:CDS |
| TCAATTGCAATAGCAGGAGC+AGG | 0.557374 | tig0024918:+68277 | None:intergenic |
| AAAGAGGCTCCAGCTCCTGT+TGG | 0.560458 | tig0024918:-67444 | Msa1421210:CDS |
| GAGCTTTGTTCCGCAGTGGT+GGG | 0.563025 | tig0024918:-70023 | Msa1421210:CDS |
| CAAGGTAACTCCAAGAAGAA+AGG | 0.563616 | tig0024918:+70216 | None:intergenic |
| CTTACCATGAAGCAGTTCCA+TGG | 0.568629 | tig0024918:+69760 | None:intergenic |
| AGAAAATTTCAACATGCTGG+TGG | 0.571281 | tig0024918:-68556 | Msa1421210:CDS |
| AATAGCAGCTGTCCCTGGAA+TGG | 0.571632 | tig0024918:-68611 | Msa1421210:CDS |
| AACTCCAAGAAGAAAGGTCG+AGG | 0.579967 | tig0024918:+70222 | None:intergenic |
| TTGTTTCTAGCATCATTGCA+TGG | 0.582988 | tig0024918:+68632 | None:intergenic |
| GTGGAAGCTTGTACTGGCAG+AGG | 0.584497 | tig0024918:-69930 | Msa1421210:CDS |
| TCAAGGAAAGGAATTGAAAG+AGG | 0.585266 | tig0024918:-67460 | Msa1421210:CDS |
| GCTGTCCCTGGAATGGTGGG+AGG | 0.588333 | tig0024918:-68604 | Msa1421210:CDS |
| GCAGCTGTCCCTGGAATGGT+GGG | 0.590768 | tig0024918:-68607 | Msa1421210:CDS |
| CCAAGAAGAAAGGTCGAGGA+AGG | 0.596141 | tig0024918:+70226 | None:intergenic |
| TCAACTTTGTGTTTGCCACA+AGG | 0.597892 | tig0024918:+70192 | None:intergenic |
| GGATATTCACCATCAAGGAA+AGG | 0.604645 | tig0024918:-67472 | Msa1421210:CDS |
| TTGTGTTTGCCACAAGGACA+AGG | 0.607869 | tig0024918:+70198 | None:intergenic |
| GCATCCCTCCCACCATTCCA+GGG | 0.622243 | tig0024918:+68599 | None:intergenic |
| GCCGTTGTTTCGAGTTACTG+GGG | 0.628977 | tig0024918:-69826 | Msa1421210:CDS |
| TCTGAACTGTAACTTTCCCA+TGG | 0.639567 | tig0024918:+69102 | None:intergenic |
| AGGTCGAGGAAGGTTTCATG+TGG | 0.643294 | tig0024918:+70236 | None:intergenic |
| GCACGAGCTTTGTTCCGCAG+TGG | 0.647126 | tig0024918:-70027 | Msa1421210:CDS |
| TTGAGCTTGTGAAACCAAGT+TGG | 0.652337 | tig0024918:-68474 | Msa1421210:CDS |
| TGAAAGTTTAGAGACAACAA+AGG | 0.660508 | tig0024918:+67354 | None:intergenic |
| TAGGCCTAAGGTTCTTAAGG+AGG | 0.663923 | tig0024918:-69797 | Msa1421210:CDS |
| GTGATGATCATCTATCTACA+GGG | 0.669055 | tig0024918:-67215 | Msa1421210:three_prime_UTR |
| AAGGATGCATTTGATGACAA+TGG | 0.671655 | tig0024918:-68497 | Msa1421210:CDS |
| CAGCCGAGACAACATCAGCA+TGG | 0.676336 | tig0024918:-69964 | Msa1421210:CDS |
| ACCCCAGTAACTCGAAACAA+CGG | 0.693976 | tig0024918:+69825 | None:intergenic |
| CCGAGACAACATCAGCATGG+CGG | 0.731392 | tig0024918:-69961 | Msa1421210:CDS |
| TTAAGGAGGATGGAACTGAG+TGG | 0.746044 | tig0024918:-69783 | Msa1421210:CDS |
| GGTGGTAGTTCCCACCACTG+CGG | 0.755021 | tig0024918:+70013 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATATATATAGTGA+TGG | + | tig0024918:68368-68387 | None:intergenic | 10.0% |
| !!! | AATGTTAAGATTTATATTTT+AGG | - | tig0024918:69287-69306 | Msa1421210:intron | 10.0% |
| !! | TATTTAAAAAATGAATCTAA+TGG | - | tig0024918:70271-70290 | Msa1421210:five_prime_UTR | 10.0% |
| !!! | GTAAATGTTTTATAACTTTT+TGG | + | tig0024918:67217-67236 | None:intergenic | 15.0% |
| !! | TCAATGTAAATTTAATTCTA+GGG | - | tig0024918:68090-68109 | Msa1421210:intron | 15.0% |
| !! | ACACAATTATAATGAAAATT+TGG | + | tig0024918:69151-69170 | None:intergenic | 15.0% |
| !! | TTCATTATAATTGTGTTAAA+AGG | - | tig0024918:69155-69174 | Msa1421210:intron | 15.0% |
| !! | TTCAAATTCTATATTTATAG+AGG | + | tig0024918:69193-69212 | None:intergenic | 15.0% |
| !!! | ATTTTTGAAGAATTTTTTGT+GGG | + | tig0024918:69455-69474 | None:intergenic | 15.0% |
| !!! | TATTTTTGAAGAATTTTTTG+TGG | + | tig0024918:69456-69475 | None:intergenic | 15.0% |
| !!! | TTTTATTTATTGAACAATTC+AGG | + | tig0024918:69977-69996 | None:intergenic | 15.0% |
| !! | TAGTAAAATCAATATTAGTT+TGG | - | tig0024918:70128-70147 | Msa1421210:five_prime_UTR | 15.0% |
| !! | TTTATACATGCAACAAATTT+AGG | + | tig0024918:67168-67187 | None:intergenic | 20.0% |
| !!! | ACATGAGAAACATTTTAATA+AGG | - | tig0024918:67242-67261 | Msa1421210:three_prime_UTR | 20.0% |
| !! | AAGAATACATATATAGAAAG+AGG | - | tig0024918:67558-67577 | Msa1421210:intron | 20.0% |
| !! | ATTTATATTGAAACCAAACA+GGG | + | tig0024918:67823-67842 | None:intergenic | 20.0% |
| !! | TATTTATATTGAAACCAAAC+AGG | + | tig0024918:67824-67843 | None:intergenic | 20.0% |
| !! | TATCATATGAAAGTAATCAA+TGG | + | tig0024918:67866-67885 | None:intergenic | 20.0% |
| !! | TATAATGAAATATAGTAAGC+TGG | - | tig0024918:68062-68081 | Msa1421210:intron | 20.0% |
| !! | ATAATGAAATATAGTAAGCT+GGG | - | tig0024918:68063-68082 | Msa1421210:intron | 20.0% |
| !! | CTCAATGTAAATTTAATTCT+AGG | - | tig0024918:68089-68108 | Msa1421210:intron | 20.0% |
| !! | AACATCATATATAGAAAACA+TGG | + | tig0024918:68167-68186 | None:intergenic | 20.0% |
| !!! | CAATACATTACATTGTTTTT+TGG | + | tig0024918:68500-68519 | None:intergenic | 20.0% |
| !! | TGTAATGTATTGTAGTAAAT+CGG | - | tig0024918:68508-68527 | Msa1421210:CDS | 20.0% |
| !! | ATTTGAATTATAATTACTGC+AGG | - | tig0024918:68630-68649 | Msa1421210:CDS | 20.0% |
| !! | GAATTTGAATTAATTGTGAT+AGG | - | tig0024918:69204-69223 | Msa1421210:intron | 20.0% |
| !! | TTCAAACTTAGTTTCTTTAA+GGG | + | tig0024918:69694-69713 | None:intergenic | 20.0% |
| !! | TTTCAAACTTAGTTTCTTTA+AGG | + | tig0024918:69695-69714 | None:intergenic | 20.0% |
| !! | AGTGTCTAAAAAACTATAAT+GGG | + | tig0024918:69748-69767 | None:intergenic | 20.0% |
| !!! | TATCAGAAATGTCTTAATTT+TGG | - | tig0024918:70178-70197 | Msa1421210:five_prime_UTR | 20.0% |
| !! | AATAAGTTGAACAATATCAC+CGG | - | tig0024918:67715-67734 | Msa1421210:intron | 25.0% |
| ! | AAAGAATTTATGAAAACAGC+CGG | + | tig0024918:67737-67756 | None:intergenic | 25.0% |
| ! | ATATGAAAGTAATCAATGGT+TGG | + | tig0024918:67862-67881 | None:intergenic | 25.0% |
| !!! | AAAAAATTTGATTTGAGAGC+TGG | - | tig0024918:68019-68038 | Msa1421210:intron | 25.0% |
| ! | GTATTTGAATGATTTCTCAT+AGG | - | tig0024918:68141-68160 | Msa1421210:intron | 25.0% |
| ! | ATCATGTACCAAAAACATTT+GGG | - | tig0024918:68242-68261 | Msa1421210:CDS | 25.0% |
| ! | ATTTGTATTTCAAGGTTTGT+GGG | - | tig0024918:68311-68330 | Msa1421210:CDS | 25.0% |
| !!! | ACAAATCTATGTGCTATTTT+CGG | + | tig0024918:68922-68941 | None:intergenic | 25.0% |
| ! | AAAATAGCACATAGATTTGT+TGG | - | tig0024918:68922-68941 | Msa1421210:intron | 25.0% |
| !!! | ACATAGATTTGTTGGTTATT+TGG | - | tig0024918:68930-68949 | Msa1421210:intron | 25.0% |
| ! | AATCATTTCATTTGTGATGT+TGG | - | tig0024918:69245-69264 | Msa1421210:intron | 25.0% |
| ! | GTTAAATCTTCAACGAAATT+TGG | - | tig0024918:69320-69339 | Msa1421210:intron | 25.0% |
| ! | GAGTGTCTAAAAAACTATAA+TGG | + | tig0024918:69749-69768 | None:intergenic | 25.0% |
| !! | TTGTGTATTGATAAACTTTC+AGG | + | tig0024918:70025-70044 | None:intergenic | 25.0% |
| !! | AATCAATATTAGTTTGGCTT+TGG | - | tig0024918:70134-70153 | Msa1421210:five_prime_UTR | 25.0% |
| AAGAATGATGCCAAAAACAA+CGG | - | tig0024918:67436-67455 | Msa1421210:CDS | 30.0% | |
| ATCTCAAAGTTTACGTTAGT+AGG | - | tig0024918:67765-67784 | Msa1421210:intron | 30.0% | |
| ATCAATGATTACATAGCTAC+CGG | + | tig0024918:67929-67948 | None:intergenic | 30.0% | |
| CATCATGTACCAAAAACATT+TGG | - | tig0024918:68241-68260 | Msa1421210:CDS | 30.0% | |
| TCATGTACCAAAAACATTTG+GGG | - | tig0024918:68243-68262 | Msa1421210:CDS | 30.0% | |
| GATTTGTATTTCAAGGTTTG+TGG | - | tig0024918:68310-68329 | Msa1421210:CDS | 30.0% | |
| !! | GACTTTTTCCGTGAAAAAAT+CGG | - | tig0024918:68464-68483 | Msa1421210:CDS | 30.0% |
| !!! | TTGACAATCCGATTTTTTCA+CGG | + | tig0024918:68475-68494 | None:intergenic | 30.0% |
| TGTATTGTAGTAAATCGGAT+TGG | - | tig0024918:68513-68532 | Msa1421210:CDS | 30.0% | |
| ACTGTAAAAAAGTTTCGTAG+AGG | + | tig0024918:68578-68597 | None:intergenic | 30.0% | |
| CTAAGAAAATTTCAACATGC+TGG | - | tig0024918:68739-68758 | Msa1421210:intron | 30.0% | |
| !! | TTTTGGTTATTACTGCACAA+GGG | - | tig0024918:68857-68876 | Msa1421210:intron | 30.0% |
| !! | TAGATTTGTTGGTTATTTGG+AGG | - | tig0024918:68933-68952 | Msa1421210:intron | 30.0% |
| CATTTAGATGCAATTGAAAG+TGG | - | tig0024918:68982-69001 | Msa1421210:intron | 30.0% | |
| CAATAATCAATTGCAATAGC+AGG | + | tig0024918:69030-69049 | None:intergenic | 30.0% | |
| CTGCTATTGCAATTGATTAT+TGG | - | tig0024918:69028-69047 | Msa1421210:CDS | 30.0% | |
| ATGAAATGATTGTGTGAATG+TGG | + | tig0024918:69236-69255 | None:intergenic | 30.0% | |
| ATACTCTCTATTCACACAAT+TGG | + | tig0024918:69380-69399 | None:intergenic | 30.0% | |
| ! | CATGTGGATTTTCATTAGAT+AGG | - | tig0024918:69562-69581 | Msa1421210:intron | 30.0% |
| !! | TGTTGTGTTGTACTTTTTGT+AGG | - | tig0024918:69805-69824 | Msa1421210:CDS | 30.0% |
| TGAAAGTTTAGAGACAACAA+AGG | + | tig0024918:69947-69966 | None:intergenic | 30.0% | |
| !! | GCTGTTATTACCGTTGTTTT+TGG | + | tig0024918:67449-67468 | None:intergenic | 35.0% |
| ATCAGTTACTTGATCTTGCA+TGG | - | tig0024918:68114-68133 | Msa1421210:intron | 35.0% | |
| !!! | TGTTTTTGGTACATGATGCT+TGG | + | tig0024918:68239-68258 | None:intergenic | 35.0% |
| ! | AACTTGTCCCCAAATGTTTT+TGG | + | tig0024918:68253-68272 | None:intergenic | 35.0% |
| TCAGATCTGTCAAGTTTCTA+AGG | - | tig0024918:68278-68297 | Msa1421210:CDS | 35.0% | |
| CAGATCTGTCAAGTTTCTAA+GGG | - | tig0024918:68279-68298 | Msa1421210:CDS | 35.0% | |
| ! | GCTCTCTGATTTGTATTTCA+AGG | - | tig0024918:68303-68322 | Msa1421210:CDS | 35.0% |
| ! | AGACTTGGTTATTCCAAGTT+CGG | - | tig0024918:68552-68571 | Msa1421210:CDS | 35.0% |
| TAATTACTGCAGGAACGATA+TGG | - | tig0024918:68640-68659 | Msa1421210:CDS | 35.0% | |
| !! | TTGTTTCTAGCATCATTGCA+TGG | + | tig0024918:68669-68688 | None:intergenic | 35.0% |
| AGAAAATTTCAACATGCTGG+TGG | - | tig0024918:68742-68761 | Msa1421210:intron | 35.0% | |
| TTGAAGAAGCAGAGAATGAA+AGG | - | tig0024918:68782-68801 | Msa1421210:intron | 35.0% | |
| ! | AAGGATGCATTTGATGACAA+TGG | - | tig0024918:68801-68820 | Msa1421210:intron | 35.0% |
| !! | CTTTTGGTTATTACTGCACA+AGG | - | tig0024918:68856-68875 | Msa1421210:intron | 35.0% |
| TTTGGTTATTACTGCACAAG+GGG | - | tig0024918:68858-68877 | Msa1421210:intron | 35.0% | |
| TGCAATTGAAAGTGGTAAAG+TGG | - | tig0024918:68990-69009 | Msa1421210:intron | 35.0% | |
| TGATTATTGGAGACTTCCTA+AGG | - | tig0024918:69041-69060 | Msa1421210:CDS | 35.0% | |
| TATGGTCGTTTAATCGAGAT+AGG | + | tig0024918:69351-69370 | None:intergenic | 35.0% | |
| AACATTCAGAACAAACGAAG+AGG | + | tig0024918:69789-69808 | None:intergenic | 35.0% | |
| TTGTAGGATATTCACCATCA+AGG | - | tig0024918:69821-69840 | Msa1421210:CDS | 35.0% | |
| CTTTCAATTCCTTTCCTTGA+TGG | + | tig0024918:69838-69857 | None:intergenic | 35.0% | |
| TCAAGGAAAGGAATTGAAAG+AGG | - | tig0024918:69838-69857 | Msa1421210:CDS | 35.0% | |
| ATGACTCAATGATAACCAAC+AGG | + | tig0024918:69872-69891 | None:intergenic | 35.0% | |
| CACCAAACAATTCCTTGATT+GGG | + | tig0024918:70057-70076 | None:intergenic | 35.0% | |
| GTGATGATCATCTATCTACA+GGG | - | tig0024918:70083-70102 | Msa1421210:five_prime_UTR | 35.0% | |
| CAAGGTAACTCCAAGAAGAA+AGG | + | tig0024918:67085-67104 | None:intergenic | 40.0% | |
| TCAACTTTGTGTTTGCCACA+AGG | + | tig0024918:67109-67128 | None:intergenic | 40.0% | |
| !!! | GTCTGCTGATCTTTTTTCTC+TGG | + | tig0024918:67406-67425 | None:intergenic | 40.0% |
| GAAAAAAGATCAGCAGACAG+AGG | - | tig0024918:67408-67427 | Msa1421210:three_prime_UTR | 40.0% | |
| ATGATGTTTGTTTGCAGCCA+TGG | - | tig0024918:68179-68198 | Msa1421210:intron | 40.0% | |
| TGATGTTTGTTTGCAGCCAT+GGG | - | tig0024918:68180-68199 | Msa1421210:CDS | 40.0% | |
| TCTGAACTGTAACTTTCCCA+TGG | + | tig0024918:68199-68218 | None:intergenic | 40.0% | |
| AGACCAATAAATCCGTTGTC+CGG | - | tig0024918:68422-68441 | Msa1421210:CDS | 40.0% | |
| TCACATGAGAAGAAGAGACT+TGG | - | tig0024918:68537-68556 | Msa1421210:CDS | 40.0% | |
| AATTTCAACATGCTGGTGGT+TGG | - | tig0024918:68746-68765 | Msa1421210:intron | 40.0% | |
| TTGAGCTTGTGAAACCAAGT+TGG | - | tig0024918:68824-68843 | Msa1421210:intron | 40.0% | |
| !!! | TATGTGCTATTTTCGGTGAG+AGG | + | tig0024918:68915-68934 | None:intergenic | 40.0% |
| TTGTGATGTTGGATCGAGAT+TGG | - | tig0024918:69256-69275 | Msa1421210:intron | 40.0% | |
| TCACACAATTGGCGCATATA+TGG | + | tig0024918:69369-69388 | None:intergenic | 40.0% | |
| !! | TAGAGAGTATTGTCAGTTGC+AGG | - | tig0024918:69390-69409 | Msa1421210:intron | 40.0% |
| ! | GTCATGTGACACTTTTCATG+TGG | - | tig0024918:69546-69565 | Msa1421210:intron | 40.0% |
| GGATATTCACCATCAAGGAA+AGG | - | tig0024918:69826-69845 | Msa1421210:CDS | 40.0% | |
| CAATATCTCTCACCCAATCA+AGG | - | tig0024918:70042-70061 | Msa1421210:CDS | 40.0% | |
| CACCCAATCAAGGAATTGTT+TGG | - | tig0024918:70052-70071 | Msa1421210:CDS | 40.0% | |
| CCACCAAACAATTCCTTGAT+TGG | + | tig0024918:70058-70077 | None:intergenic | 40.0% | |
| CCAATCAAGGAATTGTTTGG+TGG | - | tig0024918:70055-70074 | Msa1421210:CDS | 40.0% | |
| ! | AAGGAATTGTTTGGTGGTCT+TGG | - | tig0024918:70061-70080 | Msa1421210:exon | 40.0% |
| GGTGATGATCATCTATCTAC+AGG | - | tig0024918:70082-70101 | Msa1421210:five_prime_UTR | 40.0% | |
| AACTCCAAGAAGAAAGGTCG+AGG | + | tig0024918:67079-67098 | None:intergenic | 45.0% | |
| TTGGAGTTACCTTGTCCTTG+TGG | - | tig0024918:67091-67110 | Msa1421210:three_prime_UTR | 45.0% | |
| TTGTGTTTGCCACAAGGACA+AGG | + | tig0024918:67103-67122 | None:intergenic | 45.0% | |
| TCACCGCTGTTGAAAAACTG+CGG | + | tig0024918:67309-67328 | None:intergenic | 45.0% | |
| ACCCCAGTAACTCGAAACAA+CGG | + | tig0024918:67476-67495 | None:intergenic | 45.0% | |
| CAGTAGGCCTAAGGTTCTTA+AGG | - | tig0024918:67498-67517 | Msa1421210:intron | 45.0% | |
| TAGGCCTAAGGTTCTTAAGG+AGG | - | tig0024918:67501-67520 | Msa1421210:intron | 45.0% | |
| CCATCCTCCTTAAGAACCTT+AGG | + | tig0024918:67508-67527 | None:intergenic | 45.0% | |
| CCTAAGGTTCTTAAGGAGGA+TGG | - | tig0024918:67505-67524 | Msa1421210:intron | 45.0% | |
| TTAAGGAGGATGGAACTGAG+TGG | - | tig0024918:67515-67534 | Msa1421210:intron | 45.0% | |
| CTTACCATGAAGCAGTTCCA+TGG | + | tig0024918:67541-67560 | None:intergenic | 45.0% | |
| CGAAACAGACAAACCCTGTT+TGG | - | tig0024918:67807-67826 | Msa1421210:intron | 45.0% | |
| ! | AAGCCGGACAACGGATTTAT+TGG | + | tig0024918:68428-68447 | None:intergenic | 45.0% |
| ATAAATCCGTTGTCCGGCTT+TGG | - | tig0024918:68428-68447 | Msa1421210:CDS | 45.0% | |
| ! | TGAAACCAAGTTGGCATGAG+AGG | - | tig0024918:68833-68852 | Msa1421210:intron | 45.0% |
| AAAAGCCTCTCATGCCAACT+TGG | + | tig0024918:68841-68860 | None:intergenic | 45.0% | |
| ! | AAGTTGGCATGAGAGGCTTT+TGG | - | tig0024918:68840-68859 | Msa1421210:intron | 45.0% |
| ! | GCACAAGGGGTTTTCTTCAA+TGG | - | tig0024918:68871-68890 | Msa1421210:intron | 45.0% |
| TCAATTGCAATAGCAGGAGC+AGG | + | tig0024918:69024-69043 | None:intergenic | 45.0% | |
| TCCTAAGGATGCAACGCTTA+AGG | - | tig0024918:69056-69075 | Msa1421210:CDS | 45.0% | |
| ! | TCCTTAAGCGTTGCATCCTT+AGG | + | tig0024918:69060-69079 | None:intergenic | 45.0% |
| ! | CACTGTTATTCGTGCTGATG+AGG | - | tig0024918:69086-69105 | Msa1421210:CDS | 45.0% |
| TGCTGATGAGGCTCATCATA+GGG | - | tig0024918:69098-69117 | Msa1421210:CDS | 45.0% | |
| CAATGATAACCAACAGGAGC+TGG | + | tig0024918:69866-69885 | None:intergenic | 45.0% | |
| AGGGATGATGCTTCACAGAA+TGG | - | tig0024918:70102-70121 | Msa1421210:five_prime_UTR | 45.0% | |
| !!! | TTTTATATAAATTTAAAATC+CGG | - | tig0024918:67907-67926 | Msa1421210:intron | 5.0% |
| !!! | ATTTTTTAAATATATATCAT+AGG | + | tig0024918:70263-70282 | None:intergenic | 5.0% |
| AGGTCGAGGAAGGTTTCATG+TGG | + | tig0024918:67065-67084 | None:intergenic | 50.0% | |
| CCAAGAAGAAAGGTCGAGGA+AGG | + | tig0024918:67075-67094 | None:intergenic | 50.0% | |
| CCTTCCTCGACCTTTCTTCT+TGG | - | tig0024918:67072-67091 | Msa1421210:three_prime_UTR | 50.0% | |
| !! | CCACCGCAGTTTTTCAACAG+CGG | - | tig0024918:67303-67322 | Msa1421210:three_prime_UTR | 50.0% |
| GTGCTTGTGGAAGCTTGTAC+TGG | - | tig0024918:67362-67381 | Msa1421210:three_prime_UTR | 50.0% | |
| !! | ACGCCGTTGTTTCGAGTTAC+TGG | - | tig0024918:67470-67489 | Msa1421210:CDS | 50.0% |
| !! | CGCCGTTGTTTCGAGTTACT+GGG | - | tig0024918:67471-67490 | Msa1421210:CDS | 50.0% |
| !! | GCCGTTGTTTCGAGTTACTG+GGG | - | tig0024918:67472-67491 | Msa1421210:CDS | 50.0% |
| ! | CGAGTTACTGGGGTATCAGT+AGG | - | tig0024918:67482-67501 | Msa1421210:intron | 50.0% |
| GGTAATCCAAAGCCGGACAA+CGG | + | tig0024918:68437-68456 | None:intergenic | 50.0% | |
| !! | TTGTCCGGCTTTGGATTACC+AGG | - | tig0024918:68437-68456 | Msa1421210:CDS | 50.0% |
| CTGACCTGGTAATCCAAAGC+CGG | + | tig0024918:68444-68463 | None:intergenic | 50.0% | |
| TCACGGAAAAAGTCCTGACC+TGG | + | tig0024918:68458-68477 | None:intergenic | 50.0% | |
| AGTTTCGTAGAGGCCGAACT+TGG | + | tig0024918:68568-68587 | None:intergenic | 50.0% | |
| GAAACAATAGCAGCTGTCCC+TGG | - | tig0024918:68682-68701 | Msa1421210:intron | 50.0% | |
| AATAGCAGCTGTCCCTGGAA+TGG | - | tig0024918:68687-68706 | Msa1421210:intron | 50.0% | |
| ! | GTGCTGATGAGGCTCATCAT+AGG | - | tig0024918:69097-69116 | Msa1421210:CDS | 50.0% |
| !! | GAGCTTTGTTCCGCAGTGGT+GGG | - | tig0024918:67275-67294 | Msa1421210:three_prime_UTR | 55.0% |
| CCGCTGTTGAAAAACTGCGG+TGG | + | tig0024918:67306-67325 | None:intergenic | 55.0% | |
| CAGCCGAGACAACATCAGCA+TGG | - | tig0024918:67334-67353 | Msa1421210:three_prime_UTR | 55.0% | |
| CCGCCATGCTGATGTTGTCT+CGG | + | tig0024918:67340-67359 | None:intergenic | 55.0% | |
| CCGAGACAACATCAGCATGG+CGG | - | tig0024918:67337-67356 | Msa1421210:three_prime_UTR | 55.0% | |
| AGACAACATCAGCATGGCGG+TGG | - | tig0024918:67340-67359 | Msa1421210:three_prime_UTR | 55.0% | |
| ! | GTGGAAGCTTGTACTGGCAG+AGG | - | tig0024918:67368-67387 | Msa1421210:three_prime_UTR | 55.0% |
| ! | CTGGGGTATCAGTAGGCCTA+AGG | - | tig0024918:67489-67508 | Msa1421210:intron | 55.0% |
| AGGATGGAACTGAGTGGCCA+TGG | - | tig0024918:67521-67540 | Msa1421210:intron | 55.0% | |
| GTGGCCATGGAACTGCTTCA+TGG | - | tig0024918:67534-67553 | Msa1421210:intron | 55.0% | |
| !! | CGGCTTTGGATTACCAGGTC+AGG | - | tig0024918:68442-68461 | Msa1421210:CDS | 55.0% |
| AAAGAGGCTCCAGCTCCTGT+TGG | - | tig0024918:69854-69873 | Msa1421210:CDS | 55.0% | |
| !! | GCACGAGCTTTGTTCCGCAG+TGG | - | tig0024918:67271-67290 | Msa1421210:three_prime_UTR | 60.0% |
| !! | CGAGCTTTGTTCCGCAGTGG+TGG | - | tig0024918:67274-67293 | Msa1421210:three_prime_UTR | 60.0% |
| GGTGGTAGTTCCCACCACTG+CGG | + | tig0024918:67288-67307 | None:intergenic | 60.0% | |
| AGCAGCTGTCCCTGGAATGG+TGG | - | tig0024918:68690-68709 | Msa1421210:intron | 60.0% | |
| GCAGCTGTCCCTGGAATGGT+GGG | - | tig0024918:68691-68710 | Msa1421210:intron | 60.0% | |
| ! | CTGTCCCTGGAATGGTGGGA+GGG | - | tig0024918:68695-68714 | Msa1421210:intron | 60.0% |
| GCATCCCTCCCACCATTCCA+GGG | + | tig0024918:68702-68721 | None:intergenic | 60.0% | |
| AGCATCCCTCCCACCATTCC+AGG | + | tig0024918:68703-68722 | None:intergenic | 60.0% | |
| CAGCATGGCGGTGGTGCTTG+TGG | - | tig0024918:67349-67368 | Msa1421210:three_prime_UTR | 65.0% | |
| ! | GCTGTCCCTGGAATGGTGGG+AGG | - | tig0024918:68694-68713 | Msa1421210:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024918 | gene | 67020 | 70300 | 67020 | ID=Msa1421210;Name=Msa1421210 |
| tig0024918 | mRNA | 67020 | 70300 | 67020 | ID=Msa1421210-mRNA-1;Parent=Msa1421210;Name=Msa1421210-mRNA-1;_AED=0.19;_eAED=0.19;_QI=224|1|1|1|1|1|4|414|329 |
| tig0024918 | exon | 67020 | 67493 | 67020 | ID=Msa1421210-mRNA-1:exon:1974;Parent=Msa1421210-mRNA-1 |
| tig0024918 | exon | 68180 | 68668 | 68180 | ID=Msa1421210-mRNA-1:exon:1973;Parent=Msa1421210-mRNA-1 |
| tig0024918 | exon | 68996 | 69124 | 68996 | ID=Msa1421210-mRNA-1:exon:1972;Parent=Msa1421210-mRNA-1 |
| tig0024918 | exon | 69765 | 70300 | 69765 | ID=Msa1421210-mRNA-1:exon:1971;Parent=Msa1421210-mRNA-1 |
| tig0024918 | five_prime_UTR | 70077 | 70300 | 70077 | ID=Msa1421210-mRNA-1:five_prime_utr;Parent=Msa1421210-mRNA-1 |
| tig0024918 | CDS | 69765 | 70076 | 69765 | ID=Msa1421210-mRNA-1:cds;Parent=Msa1421210-mRNA-1 |
| tig0024918 | CDS | 68996 | 69124 | 68996 | ID=Msa1421210-mRNA-1:cds;Parent=Msa1421210-mRNA-1 |
| tig0024918 | CDS | 68180 | 68668 | 68180 | ID=Msa1421210-mRNA-1:cds;Parent=Msa1421210-mRNA-1 |
| tig0024918 | CDS | 67434 | 67493 | 67434 | ID=Msa1421210-mRNA-1:cds;Parent=Msa1421210-mRNA-1 |
| tig0024918 | three_prime_UTR | 67020 | 67433 | 67020 | ID=Msa1421210-mRNA-1:three_prime_utr;Parent=Msa1421210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
