AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0864290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864290 MtrunA17_Chr5g0446461 95.833 144 6 0 1 144 1 144 4.92e-101 285
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864290 AT5G55640.1 57.432 148 57 4 1 144 1 146 4.82e-52 162

Find 85 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACCTTTGCAGCAGAATT+TGG 0.138709 5_4:+64525742 None:intergenic
CCCTCCCAAACCCTAAAATT+AGG 0.157658 5_4:-64527047 Msa0864290:five_prime_UTR
TTTATTTCTTTCATTATTCT+TGG 0.171908 5_4:+64525031 None:intergenic
TATAACAGAAAGTGCTAAAT+TGG 0.230034 5_4:+64525284 None:intergenic
ATAGTTCCTTGTGGAAATTA+TGG 0.237298 5_4:-64525143 Msa0864290:three_prime_UTR
CCTCCCAAACCCTAAAATTA+GGG 0.263482 5_4:-64527046 Msa0864290:five_prime_UTR
TCTATCAATTCAATTTGTTT+TGG 0.266660 5_4:-64527009 Msa0864290:five_prime_UTR
GATAATTCTGAACAAGAAAA+AGG 0.270138 5_4:+64525006 None:intergenic
CTTGTTCAGAATTATCTTCC+AGG 0.310330 5_4:-64524999 Msa0864290:three_prime_UTR
TGGATTTGTGATTCCGAGTT+TGG 0.316309 5_4:-64525815 Msa0864290:CDS
TAGTTCCTTGTGGAAATTAT+GGG 0.328956 5_4:-64525142 Msa0864290:three_prime_UTR
AACCGCTGCTTCCGGTTTGA+TGG 0.346467 5_4:+64525537 None:intergenic
TCCTCTCAAACTCAGCTTCA+TGG 0.353538 5_4:+64525364 None:intergenic
TTATTTCTTTCATTATTCTT+GGG 0.357586 5_4:+64525032 None:intergenic
TTCTTGAAGTTATTTATTCT+CGG 0.368947 5_4:-64525314 Msa0864290:three_prime_UTR
TTTGCTTGAACCGCTGCTTC+CGG 0.394039 5_4:+64525529 None:intergenic
CCATGGATTTCAATGCGAAA+TGG 0.398486 5_4:+64526944 None:intergenic
AGAGAATTAGTGGGACAGGT+AGG 0.410966 5_4:-64525488 Msa0864290:CDS
GGATTTGTGATTCCGAGTTT+GGG 0.411780 5_4:-64525814 Msa0864290:CDS
GTCATCGTCTTGTTGTTGAA+TGG 0.422378 5_4:+64526877 None:intergenic
GGGCGATAAAGCCCGATTGA+TGG 0.426364 5_4:+64526965 None:intergenic
TCATCGTCTTGTTGTTGAAT+GGG 0.438294 5_4:+64526878 None:intergenic
AGAAGCGAAGCAAATGAAAC+AGG 0.459852 5_4:-64525069 Msa0864290:three_prime_UTR
GAAGCTGATAAGAGAATTAG+TGG 0.460182 5_4:-64525498 Msa0864290:CDS
CATGGATTTCAATGCGAAAT+GGG 0.464101 5_4:+64526945 None:intergenic
AAGGAAGAGAACATCTATCT+TGG 0.472603 5_4:-64525606 Msa0864290:CDS
GAGAATTAGTGGGACAGGTA+GGG 0.477992 5_4:-64525487 Msa0864290:CDS
GATAACCTGAGGGAGCTTGT+AGG 0.494617 5_4:-64525453 Msa0864290:CDS
GATAAGAGAATTAGTGGGAC+AGG 0.498006 5_4:-64525492 Msa0864290:CDS
AAGAGGTGATTCCATCAAAC+CGG 0.500577 5_4:-64525548 Msa0864290:CDS
TGTGGATCTAACCAGTCCTT+AGG 0.501906 5_4:+64525390 None:intergenic
TCCAGGCTTATATATTAGCA+TGG 0.502308 5_4:-64524982 Msa0864290:three_prime_UTR
GCGAAGGAGGCGCTCCGTGT+GGG 0.523316 5_4:+64525583 None:intergenic
AACAACAAGACGATGACGAG+TGG 0.523988 5_4:-64526871 Msa0864290:CDS
CCCCACCTACAAGCTCCCTC+AGG 0.528996 5_4:+64525448 None:intergenic
CCAGGCTTATATATTAGCAT+GGG 0.529187 5_4:-64524981 Msa0864290:three_prime_UTR
ATCTCCAAATTCTGCTGCAA+AGG 0.530813 5_4:-64525746 Msa0864290:intron
AGCAAGTGTTGGCATGGCAA+AGG 0.530837 5_4:-64525421 Msa0864290:CDS
AACCTGAGGGAGCTTGTAGG+TGG 0.535590 5_4:-64525450 Msa0864290:CDS
CCATTTCGCATTGAAATCCA+TGG 0.540903 5_4:-64526944 Msa0864290:five_prime_UTR
CGTGTAGCATATAAGTTGAC+CGG 0.541664 5_4:+64524835 None:intergenic
CCCATGCTAATATATAAGCC+TGG 0.548267 5_4:+64524981 None:intergenic
ACCTGAGGGAGCTTGTAGGT+GGG 0.550474 5_4:-64525449 Msa0864290:CDS
GCAAGTGTTGGCATGGCAAA+GGG 0.551898 5_4:-64525420 Msa0864290:CDS
TTGATGCATCATTCAAGACA+TGG 0.555753 5_4:-64525254 Msa0864290:three_prime_UTR
TGCGAAGGAGGCGCTCCGTG+TGG 0.563140 5_4:+64525582 None:intergenic
GACAGGTAGGGAGAATAAAG+TGG 0.564045 5_4:-64525475 Msa0864290:CDS
CCTGAGGGAGCTTGTAGGTG+GGG 0.566679 5_4:-64525448 Msa0864290:CDS
GCCATGAAGCTGAGTTTGAG+AGG 0.567950 5_4:-64525365 Msa0864290:CDS
AATATTGAACCACCCACTCA+AGG 0.572840 5_4:+64527079 None:intergenic
AGAAGTGGATTGCAGTGAAG+AGG 0.572913 5_4:+64526901 None:intergenic
GAGTCTTCAATTCCCAAACT+CGG 0.573667 5_4:+64525802 None:intergenic
TGATGCATCATTCAAGACAT+GGG 0.576868 5_4:-64525253 Msa0864290:three_prime_UTR
GGCAAAGGGATCCTCTCCTA+AGG 0.577485 5_4:-64525406 Msa0864290:CDS
AGGGATCCTCTCCTAAGGAC+TGG 0.582225 5_4:-64525401 Msa0864290:CDS
TTCGCAATCAAAACAACAAG+AGG 0.584941 5_4:-64525565 Msa0864290:CDS
ATATTGAACCACCCACTCAA+GGG 0.588932 5_4:+64527080 None:intergenic
GAAGTGGATTGCAGTGAAGA+GGG 0.590735 5_4:+64526902 None:intergenic
TTGCAGTGAAGAGGGCTCCA+TGG 0.592706 5_4:+64526910 None:intergenic
AACATCTATCTTGGCCCACA+CGG 0.594812 5_4:-64525597 Msa0864290:CDS
ACAACAAGACGATGACGAGT+GGG 0.595529 5_4:-64526870 Msa0864290:CDS
TTGTTGTTGAATGGGAGAAG+TGG 0.596079 5_4:+64526886 None:intergenic
GGAGAAAGCAAGTGTTGGCA+TGG 0.597548 5_4:-64525427 Msa0864290:CDS
ATAACTGTACTTTAGTAATG+TGG 0.597886 5_4:-64524944 Msa0864290:three_prime_UTR
AACTTTATTATCAAAAGACC+AGG 0.598120 5_4:+64525194 None:intergenic
CAAAAGTACCCTTGAGTGGG+TGG 0.599799 5_4:-64527088 Msa0864290:five_prime_UTR
TTGTTGGTTGTAGACACTGA+TGG 0.603452 5_4:-64525835 Msa0864290:intron
TTCCATCAAACCGGAAGCAG+CGG 0.611456 5_4:-64525539 Msa0864290:CDS
CCATGGTCATCGCTTTACCA+TGG 0.614834 5_4:-64526927 Msa0864290:exon
AATTATACTATAGTTCCTTG+TGG 0.618225 5_4:-64525152 Msa0864290:three_prime_UTR
ACGACAAAAGTACCCTTGAG+TGG 0.621941 5_4:-64527092 Msa0864290:five_prime_UTR
ATTCAAGACATGGGTTACAG+AGG 0.628755 5_4:-64525244 Msa0864290:three_prime_UTR
GGTGGGGAGAAAGCAAGTGT+TGG 0.632585 5_4:-64525432 Msa0864290:CDS
AACTCAGCTTCATGGCAATG+TGG 0.632831 5_4:+64525372 None:intergenic
AGAATAAAGTGGATAACCTG+AGG 0.644766 5_4:-64525464 Msa0864290:CDS
CGACAAAAGTACCCTTGAGT+GGG 0.644888 5_4:-64527091 Msa0864290:five_prime_UTR
ATCTAACCAGTCCTTAGGAG+AGG 0.645040 5_4:+64525395 None:intergenic
CTGACAATAAGTTTATCACC+TGG 0.656352 5_4:-64525212 Msa0864290:three_prime_UTR
GAATAAAGTGGATAACCTGA+GGG 0.663435 5_4:-64525463 Msa0864290:CDS
CCATGGTAAAGCGATGACCA+TGG 0.665734 5_4:+64526927 None:intergenic
TCAAGCCCATAATTTCCACA+AGG 0.668520 5_4:+64525137 None:intergenic
AAGCTGATAAGAGAATTAGT+GGG 0.703929 5_4:-64525497 Msa0864290:CDS
CAACAAGACGATGACGAGTG+GGG 0.703979 5_4:-64526869 Msa0864290:intron
ATGAAGCTGAGTTTGAGAGG+AGG 0.745587 5_4:-64525362 Msa0864290:CDS
TGAAACAGGAAGATACAGAG+TGG 0.752550 5_4:-64525055 Msa0864290:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATCATAAATCATATTT+AGG + chr5_4:64525747-64525766 None:intergenic 10.0%
!! TTATATCATAAATCATATTT+AGG + chr5_4:64525747-64525766 None:intergenic 10.0%
!!! TAAAATAAACCCTAATTTTA+GGG + chr5_4:64524910-64524929 None:intergenic 15.0%
!!! TTAAAATAAACCCTAATTTT+AGG + chr5_4:64524911-64524930 None:intergenic 15.0%
!! ATTAAAATCCCAATTATTTA+GGG + chr5_4:64525202-64525221 None:intergenic 15.0%
!! AATTAAAATCCCAATTATTT+AGG + chr5_4:64525203-64525222 None:intergenic 15.0%
!!! CTTATTGATTTATTGAATTT+AGG - chr5_4:64525283-64525302 Msa0864290:three_prime_UTR 15.0%
!!! TCTTCTTAATTTTATTTTCT+GGG - chr5_4:64525381-64525400 Msa0864290:CDS 15.0%
!! TTAATGATTAAATAAAGTAC+AGG + chr5_4:64525423-64525442 None:intergenic 15.0%
!!! ATAGCATTTTACTTTTTTAA+TGG - chr5_4:64526047-64526066 Msa0864290:intron 15.0%
!!! TGTTTTTTTATAGAATAAGA+AGG - chr5_4:64526319-64526338 Msa0864290:intron 15.0%
!!! TTATTTCTTTCATTATTCTT+GGG + chr5_4:64526915-64526934 None:intergenic 15.0%
!!! TTTATTTCTTTCATTATTCT+TGG + chr5_4:64526916-64526935 None:intergenic 15.0%
!!! TAAAATAAACCCTAATTTTA+GGG + chr5_4:64524910-64524929 None:intergenic 15.0%
!!! TTAAAATAAACCCTAATTTT+AGG + chr5_4:64524911-64524930 None:intergenic 15.0%
!! ATTAAAATCCCAATTATTTA+GGG + chr5_4:64525202-64525221 None:intergenic 15.0%
!! AATTAAAATCCCAATTATTT+AGG + chr5_4:64525203-64525222 None:intergenic 15.0%
!!! CTTATTGATTTATTGAATTT+AGG - chr5_4:64525283-64525302 Msa0864290:three_prime_UTR 15.0%
!!! TCTTCTTAATTTTATTTTCT+GGG - chr5_4:64525381-64525400 Msa0864290:CDS 15.0%
!! TTAATGATTAAATAAAGTAC+AGG + chr5_4:64525423-64525442 None:intergenic 15.0%
!!! ATAGCATTTTACTTTTTTAA+TGG - chr5_4:64526047-64526066 Msa0864290:intron 15.0%
!!! TGTTTTTTTATAGAATAAGA+AGG - chr5_4:64526319-64526338 Msa0864290:intron 15.0%
!!! TTATTTCTTTCATTATTCTT+GGG + chr5_4:64526915-64526934 None:intergenic 15.0%
!!! TTTATTTCTTTCATTATTCT+TGG + chr5_4:64526916-64526935 None:intergenic 15.0%
!!! TCTATCAATTCAATTTGTTT+TGG - chr5_4:64524935-64524954 Msa0864290:three_prime_UTR 20.0%
!! TGATTCTGCTTAAAAAATAA+AGG + chr5_4:64525131-64525150 None:intergenic 20.0%
!!! TATTTTTTAAGCAGAATCAA+TGG - chr5_4:64525132-64525151 Msa0864290:three_prime_UTR 20.0%
!!! TTGGGATTTTAATTTTGAAT+TGG - chr5_4:64525209-64525228 Msa0864290:three_prime_UTR 20.0%
!!! ATTGATTTATTGAATTTAGG+TGG - chr5_4:64525286-64525305 Msa0864290:three_prime_UTR 20.0%
!!! GTCTTCTTAATTTTATTTTC+TGG - chr5_4:64525380-64525399 Msa0864290:CDS 20.0%
!!! CTTCTTAATTTTATTTTCTG+GGG - chr5_4:64525382-64525401 Msa0864290:CDS 20.0%
!! AGAATAGATCAGATAATTAT+TGG - chr5_4:64525715-64525734 Msa0864290:intron 20.0%
!! GAATAGATCAGATAATTATT+GGG - chr5_4:64525716-64525735 Msa0864290:intron 20.0%
!!! ACTTATTGTTTTACATAGTT+AGG - chr5_4:64526002-64526021 Msa0864290:intron 20.0%
!! GTTCTTAAATGAATATTCTT+TGG - chr5_4:64526082-64526101 Msa0864290:intron 20.0%
!! TTCTTGAAGTTATTTATTCT+CGG - chr5_4:64526630-64526649 Msa0864290:intron 20.0%
!!! TCTATCAATTCAATTTGTTT+TGG - chr5_4:64524935-64524954 Msa0864290:three_prime_UTR 20.0%
!! TGATTCTGCTTAAAAAATAA+AGG + chr5_4:64525131-64525150 None:intergenic 20.0%
!!! TATTTTTTAAGCAGAATCAA+TGG - chr5_4:64525132-64525151 Msa0864290:three_prime_UTR 20.0%
!!! TTGGGATTTTAATTTTGAAT+TGG - chr5_4:64525209-64525228 Msa0864290:three_prime_UTR 20.0%
!!! ATTGATTTATTGAATTTAGG+TGG - chr5_4:64525286-64525305 Msa0864290:three_prime_UTR 20.0%
!!! GTCTTCTTAATTTTATTTTC+TGG - chr5_4:64525380-64525399 Msa0864290:CDS 20.0%
!!! CTTCTTAATTTTATTTTCTG+GGG - chr5_4:64525382-64525401 Msa0864290:CDS 20.0%
!! AGAATAGATCAGATAATTAT+TGG - chr5_4:64525715-64525734 Msa0864290:intron 20.0%
!! GAATAGATCAGATAATTATT+GGG - chr5_4:64525716-64525735 Msa0864290:intron 20.0%
!!! ACTTATTGTTTTACATAGTT+AGG - chr5_4:64526002-64526021 Msa0864290:intron 20.0%
!! GTTCTTAAATGAATATTCTT+TGG - chr5_4:64526082-64526101 Msa0864290:intron 20.0%
!! TTCTTGAAGTTATTTATTCT+CGG - chr5_4:64526630-64526649 Msa0864290:intron 20.0%
! TAAAGGAAAGAATGAAATTG+AGG + chr5_4:64525114-64525133 None:intergenic 25.0%
! AATGGATCATCTAAGAAAAA+AGG - chr5_4:64525150-64525169 Msa0864290:three_prime_UTR 25.0%
! ATGGATCATCTAAGAAAAAA+GGG - chr5_4:64525151-64525170 Msa0864290:three_prime_UTR 25.0%
!!! AGTTTTTTTATTAAGCCTAG+CGG - chr5_4:64525527-64525546 Msa0864290:CDS 25.0%
!!! ATCAAAATTAACTTGTCTGT+TGG - chr5_4:64525899-64525918 Msa0864290:intron 25.0%
!!! TCAAAATTAACTTGTCTGTT+GGG - chr5_4:64525900-64525919 Msa0864290:intron 25.0%
!! AATATTCTTTGGACTTTTGT+TGG - chr5_4:64526093-64526112 Msa0864290:intron 25.0%
!! TGAAAGAATTGTTTCTTCTT+AGG - chr5_4:64526226-64526245 Msa0864290:intron 25.0%
!!! AATATGTAGGCTTTAGATAT+TGG - chr5_4:64526259-64526278 Msa0864290:intron 25.0%
!!! TATAACAGAAAGTGCTAAAT+TGG + chr5_4:64526663-64526682 None:intergenic 25.0%
! AACTTTATTATCAAAAGACC+AGG + chr5_4:64526753-64526772 None:intergenic 25.0%
! AATTATACTATAGTTCCTTG+TGG - chr5_4:64526792-64526811 Msa0864290:intron 25.0%
! GATAATTCTGAACAAGAAAA+AGG + chr5_4:64526941-64526960 None:intergenic 25.0%
! ATAACTGTACTTTAGTAATG+TGG - chr5_4:64527000-64527019 Msa0864290:five_prime_UTR 25.0%
! TAAAGGAAAGAATGAAATTG+AGG + chr5_4:64525114-64525133 None:intergenic 25.0%
! AATGGATCATCTAAGAAAAA+AGG - chr5_4:64525150-64525169 Msa0864290:three_prime_UTR 25.0%
! ATGGATCATCTAAGAAAAAA+GGG - chr5_4:64525151-64525170 Msa0864290:three_prime_UTR 25.0%
!!! AGTTTTTTTATTAAGCCTAG+CGG - chr5_4:64525527-64525546 Msa0864290:CDS 25.0%
!!! ATCAAAATTAACTTGTCTGT+TGG - chr5_4:64525899-64525918 Msa0864290:intron 25.0%
!!! TCAAAATTAACTTGTCTGTT+GGG - chr5_4:64525900-64525919 Msa0864290:intron 25.0%
!! AATATTCTTTGGACTTTTGT+TGG - chr5_4:64526093-64526112 Msa0864290:intron 25.0%
!! TGAAAGAATTGTTTCTTCTT+AGG - chr5_4:64526226-64526245 Msa0864290:intron 25.0%
!!! AATATGTAGGCTTTAGATAT+TGG - chr5_4:64526259-64526278 Msa0864290:intron 25.0%
!!! TATAACAGAAAGTGCTAAAT+TGG + chr5_4:64526663-64526682 None:intergenic 25.0%
! AACTTTATTATCAAAAGACC+AGG + chr5_4:64526753-64526772 None:intergenic 25.0%
! AATTATACTATAGTTCCTTG+TGG - chr5_4:64526792-64526811 Msa0864290:intron 25.0%
! GATAATTCTGAACAAGAAAA+AGG + chr5_4:64526941-64526960 None:intergenic 25.0%
! ATAACTGTACTTTAGTAATG+TGG - chr5_4:64527000-64527019 Msa0864290:five_prime_UTR 25.0%
!!! AAACCCTAATTTTAGGGTTT+GGG + chr5_4:64524904-64524923 None:intergenic 30.0%
!!! TAAACCCTAATTTTAGGGTT+TGG + chr5_4:64524905-64524924 None:intergenic 30.0%
!!! TTGCTTTTTGTTCCATCAAT+CGG - chr5_4:64524967-64524986 Msa0864290:three_prime_UTR 30.0%
! AAGAAAAAAGGGATCTTTTG+TGG - chr5_4:64525162-64525181 Msa0864290:three_prime_UTR 30.0%
TATGCGTTTCCCTAAATAAT+TGG - chr5_4:64525190-64525209 Msa0864290:three_prime_UTR 30.0%
ATGCGTTTCCCTAAATAATT+GGG - chr5_4:64525191-64525210 Msa0864290:three_prime_UTR 30.0%
!! ACACTGATTGATTCGTTTAT+TGG - chr5_4:64525234-64525253 Msa0864290:three_prime_UTR 30.0%
TCCAATTGGCAAATACTATT+CGG + chr5_4:64525332-64525351 None:intergenic 30.0%
CTCAACAAAACTAATCCAAT+TGG + chr5_4:64525346-64525365 None:intergenic 30.0%
AAGCTAGAACTTAACACATT+CGG + chr5_4:64525459-64525478 None:intergenic 30.0%
TATTGCATAGAGATGATATC+TGG - chr5_4:64525496-64525515 Msa0864290:CDS 30.0%
AGACTATATCAGATAGGATT+AGG - chr5_4:64525580-64525599 Msa0864290:CDS 30.0%
ATGATAATACTAGCAAGAGA+TGG - chr5_4:64525604-64525623 Msa0864290:CDS 30.0%
TGATAATACTAGCAAGAGAT+GGG - chr5_4:64525605-64525624 Msa0864290:CDS 30.0%
!! TAGAAAAGATGGTGGAAAAT+GGG - chr5_4:64525644-64525663 Msa0864290:intron 30.0%
AGATCAGATAATTATTGGGT+TGG - chr5_4:64525720-64525739 Msa0864290:intron 30.0%
AAGCTGATAAGAGAATTAGT+GGG - chr5_4:64526447-64526466 Msa0864290:intron 30.0%
ATAGTTCCTTGTGGAAATTA+TGG - chr5_4:64526801-64526820 Msa0864290:intron 30.0%
TAGTTCCTTGTGGAAATTAT+GGG - chr5_4:64526802-64526821 Msa0864290:intron 30.0%
GCACACAAAAATATCAAAAC+CGG - chr5_4:64527090-64527109 Msa0864290:five_prime_UTR 30.0%
!!! AAACCCTAATTTTAGGGTTT+GGG + chr5_4:64524904-64524923 None:intergenic 30.0%
!!! TAAACCCTAATTTTAGGGTT+TGG + chr5_4:64524905-64524924 None:intergenic 30.0%
!!! TTGCTTTTTGTTCCATCAAT+CGG - chr5_4:64524967-64524986 Msa0864290:three_prime_UTR 30.0%
! AAGAAAAAAGGGATCTTTTG+TGG - chr5_4:64525162-64525181 Msa0864290:three_prime_UTR 30.0%
TATGCGTTTCCCTAAATAAT+TGG - chr5_4:64525190-64525209 Msa0864290:three_prime_UTR 30.0%
ATGCGTTTCCCTAAATAATT+GGG - chr5_4:64525191-64525210 Msa0864290:three_prime_UTR 30.0%
!! ACACTGATTGATTCGTTTAT+TGG - chr5_4:64525234-64525253 Msa0864290:three_prime_UTR 30.0%
TCCAATTGGCAAATACTATT+CGG + chr5_4:64525332-64525351 None:intergenic 30.0%
CTCAACAAAACTAATCCAAT+TGG + chr5_4:64525346-64525365 None:intergenic 30.0%
AAGCTAGAACTTAACACATT+CGG + chr5_4:64525459-64525478 None:intergenic 30.0%
TATTGCATAGAGATGATATC+TGG - chr5_4:64525496-64525515 Msa0864290:CDS 30.0%
AGACTATATCAGATAGGATT+AGG - chr5_4:64525580-64525599 Msa0864290:CDS 30.0%
ATGATAATACTAGCAAGAGA+TGG - chr5_4:64525604-64525623 Msa0864290:CDS 30.0%
TGATAATACTAGCAAGAGAT+GGG - chr5_4:64525605-64525624 Msa0864290:CDS 30.0%
!! TAGAAAAGATGGTGGAAAAT+GGG - chr5_4:64525644-64525663 Msa0864290:intron 30.0%
AGATCAGATAATTATTGGGT+TGG - chr5_4:64525720-64525739 Msa0864290:intron 30.0%
AAGCTGATAAGAGAATTAGT+GGG - chr5_4:64526447-64526466 Msa0864290:intron 30.0%
ATAGTTCCTTGTGGAAATTA+TGG - chr5_4:64526801-64526820 Msa0864290:intron 30.0%
TAGTTCCTTGTGGAAATTAT+GGG - chr5_4:64526802-64526821 Msa0864290:intron 30.0%
GCACACAAAAATATCAAAAC+CGG - chr5_4:64527090-64527109 Msa0864290:five_prime_UTR 30.0%
!! TGCTTTTTGTTCCATCAATC+GGG - chr5_4:64524968-64524987 Msa0864290:three_prime_UTR 35.0%
CATGGATTTCAATGCGAAAT+GGG + chr5_4:64525002-64525021 None:intergenic 35.0%
!! TCATCGTCTTGTTGTTGAAT+GGG + chr5_4:64525069-64525088 None:intergenic 35.0%
ACCGAATAGTATTTGCCAAT+TGG - chr5_4:64525328-64525347 Msa0864290:three_prime_UTR 35.0%
GTGGTAAGACTATATCAGAT+AGG - chr5_4:64525574-64525593 Msa0864290:CDS 35.0%
GATAATACTAGCAAGAGATG+GGG - chr5_4:64525606-64525625 Msa0864290:CDS 35.0%
ACCTATTGTAGAAAAGATGG+TGG - chr5_4:64525636-64525655 Msa0864290:intron 35.0%
! TCCACCATCTTTTCTACAAT+AGG + chr5_4:64525640-64525659 None:intergenic 35.0%
!! GTAGAAAAGATGGTGGAAAA+TGG - chr5_4:64525643-64525662 Msa0864290:intron 35.0%
! AACAATCAAGCCTTATCAGT+GGG + chr5_4:64525801-64525820 None:intergenic 35.0%
!! TGCACTTGTTTGATTTTGCT+CGG - chr5_4:64525954-64525973 Msa0864290:intron 35.0%
TTAAGAAGCAAGTATCTCAC+AGG + chr5_4:64525981-64526000 None:intergenic 35.0%
! TTGTTTCTTCTTAGGATGAC+TGG - chr5_4:64526234-64526253 Msa0864290:intron 35.0%
AGGATGACTGGATAATATGT+AGG - chr5_4:64526246-64526265 Msa0864290:intron 35.0%
!! TAGGCTTTAGATATTGGAAC+TGG - chr5_4:64526265-64526284 Msa0864290:intron 35.0%
AAGGAAGAGAACATCTATCT+TGG - chr5_4:64526338-64526357 Msa0864290:intron 35.0%
!!! TCTTGTTGTTTTGATTGCGA+AGG + chr5_4:64526380-64526399 None:intergenic 35.0%
TTCGCAATCAAAACAACAAG+AGG - chr5_4:64526379-64526398 Msa0864290:intron 35.0%
GAAGCTGATAAGAGAATTAG+TGG - chr5_4:64526446-64526465 Msa0864290:intron 35.0%
AGAATAAAGTGGATAACCTG+AGG - chr5_4:64526480-64526499 Msa0864290:intron 35.0%
GAATAAAGTGGATAACCTGA+GGG - chr5_4:64526481-64526500 Msa0864290:intron 35.0%
TTGATGCATCATTCAAGACA+TGG - chr5_4:64526690-64526709 Msa0864290:intron 35.0%
TGATGCATCATTCAAGACAT+GGG - chr5_4:64526691-64526710 Msa0864290:intron 35.0%
CTGACAATAAGTTTATCACC+TGG - chr5_4:64526732-64526751 Msa0864290:intron 35.0%
!!! TTTTCTGTGTCGATTAGTAG+TGG + chr5_4:64526848-64526867 None:intergenic 35.0%
CTTGTTCAGAATTATCTTCC+AGG - chr5_4:64526945-64526964 Msa0864290:five_prime_UTR 35.0%
TCCAGGCTTATATATTAGCA+TGG - chr5_4:64526962-64526981 Msa0864290:five_prime_UTR 35.0%
CCAGGCTTATATATTAGCAT+GGG - chr5_4:64526963-64526982 Msa0864290:five_prime_UTR 35.0%
! TATTAGCATGGGTTTTCTGA+AGG - chr5_4:64526974-64526993 Msa0864290:five_prime_UTR 35.0%
!! TGCTTTTTGTTCCATCAATC+GGG - chr5_4:64524968-64524987 Msa0864290:three_prime_UTR 35.0%
CATGGATTTCAATGCGAAAT+GGG + chr5_4:64525002-64525021 None:intergenic 35.0%
!! TCATCGTCTTGTTGTTGAAT+GGG + chr5_4:64525069-64525088 None:intergenic 35.0%
ACCGAATAGTATTTGCCAAT+TGG - chr5_4:64525328-64525347 Msa0864290:three_prime_UTR 35.0%
GTGGTAAGACTATATCAGAT+AGG - chr5_4:64525574-64525593 Msa0864290:CDS 35.0%
GATAATACTAGCAAGAGATG+GGG - chr5_4:64525606-64525625 Msa0864290:CDS 35.0%
ACCTATTGTAGAAAAGATGG+TGG - chr5_4:64525636-64525655 Msa0864290:intron 35.0%
! TCCACCATCTTTTCTACAAT+AGG + chr5_4:64525640-64525659 None:intergenic 35.0%
!! GTAGAAAAGATGGTGGAAAA+TGG - chr5_4:64525643-64525662 Msa0864290:intron 35.0%
! AACAATCAAGCCTTATCAGT+GGG + chr5_4:64525801-64525820 None:intergenic 35.0%
!! TGCACTTGTTTGATTTTGCT+CGG - chr5_4:64525954-64525973 Msa0864290:intron 35.0%
TTAAGAAGCAAGTATCTCAC+AGG + chr5_4:64525981-64526000 None:intergenic 35.0%
! TTGTTTCTTCTTAGGATGAC+TGG - chr5_4:64526234-64526253 Msa0864290:intron 35.0%
AGGATGACTGGATAATATGT+AGG - chr5_4:64526246-64526265 Msa0864290:intron 35.0%
!! TAGGCTTTAGATATTGGAAC+TGG - chr5_4:64526265-64526284 Msa0864290:intron 35.0%
AAGGAAGAGAACATCTATCT+TGG - chr5_4:64526338-64526357 Msa0864290:intron 35.0%
!!! TCTTGTTGTTTTGATTGCGA+AGG + chr5_4:64526380-64526399 None:intergenic 35.0%
TTCGCAATCAAAACAACAAG+AGG - chr5_4:64526379-64526398 Msa0864290:intron 35.0%
GAAGCTGATAAGAGAATTAG+TGG - chr5_4:64526446-64526465 Msa0864290:intron 35.0%
AGAATAAAGTGGATAACCTG+AGG - chr5_4:64526480-64526499 Msa0864290:intron 35.0%
GAATAAAGTGGATAACCTGA+GGG - chr5_4:64526481-64526500 Msa0864290:intron 35.0%
TTGATGCATCATTCAAGACA+TGG - chr5_4:64526690-64526709 Msa0864290:intron 35.0%
TGATGCATCATTCAAGACAT+GGG - chr5_4:64526691-64526710 Msa0864290:intron 35.0%
CTGACAATAAGTTTATCACC+TGG - chr5_4:64526732-64526751 Msa0864290:intron 35.0%
!!! TTTTCTGTGTCGATTAGTAG+TGG + chr5_4:64526848-64526867 None:intergenic 35.0%
CTTGTTCAGAATTATCTTCC+AGG - chr5_4:64526945-64526964 Msa0864290:five_prime_UTR 35.0%
TCCAGGCTTATATATTAGCA+TGG - chr5_4:64526962-64526981 Msa0864290:five_prime_UTR 35.0%
CCAGGCTTATATATTAGCAT+GGG - chr5_4:64526963-64526982 Msa0864290:five_prime_UTR 35.0%
! TATTAGCATGGGTTTTCTGA+AGG - chr5_4:64526974-64526993 Msa0864290:five_prime_UTR 35.0%
!!! AAGGGTACTTTTGTCGTTCT+CGG + chr5_4:64524849-64524868 None:intergenic 40.0%
ATATTGAACCACCCACTCAA+GGG + chr5_4:64524867-64524886 None:intergenic 40.0%
AATATTGAACCACCCACTCA+AGG + chr5_4:64524868-64524887 None:intergenic 40.0%
!!! CCTAATTTTAGGGTTTGGGA+GGG + chr5_4:64524900-64524919 None:intergenic 40.0%
CCTCCCAAACCCTAAAATTA+GGG - chr5_4:64524898-64524917 Msa0864290:three_prime_UTR 40.0%
CCATGGATTTCAATGCGAAA+TGG + chr5_4:64525003-64525022 None:intergenic 40.0%
CCATTTCGCATTGAAATCCA+TGG - chr5_4:64525000-64525019 Msa0864290:three_prime_UTR 40.0%
! TTGTTGTTGAATGGGAGAAG+TGG + chr5_4:64525061-64525080 None:intergenic 40.0%
!! GTCATCGTCTTGTTGTTGAA+TGG + chr5_4:64525070-64525089 None:intergenic 40.0%
AGAACTTAACACATTCGGCA+AGG + chr5_4:64525454-64525473 None:intergenic 40.0%
GGCACCTATTGTAGAAAAGA+TGG - chr5_4:64525633-64525652 Msa0864290:intron 40.0%
! ACAATCAAGCCTTATCAGTG+GGG + chr5_4:64525800-64525819 None:intergenic 40.0%
! CAACAATCAAGCCTTATCAG+TGG + chr5_4:64525802-64525821 None:intergenic 40.0%
! TTGTTGGTTGTAGACACTGA+TGG - chr5_4:64526109-64526128 Msa0864290:intron 40.0%
TGGATTTGTGATTCCGAGTT+TGG - chr5_4:64526129-64526148 Msa0864290:intron 40.0%
GGATTTGTGATTCCGAGTTT+GGG - chr5_4:64526130-64526149 Msa0864290:intron 40.0%
GAGTCTTCAATTCCCAAACT+CGG + chr5_4:64526145-64526164 None:intergenic 40.0%
ATCTCCAAATTCTGCTGCAA+AGG - chr5_4:64526198-64526217 Msa0864290:intron 40.0%
!!! TGTTGTTTTGATTGCGAAGG+AGG + chr5_4:64526377-64526396 None:intergenic 40.0%
AAGAGGTGATTCCATCAAAC+CGG - chr5_4:64526396-64526415 Msa0864290:intron 40.0%
GATAAGAGAATTAGTGGGAC+AGG - chr5_4:64526452-64526471 Msa0864290:intron 40.0%
! ATTCAAGACATGGGTTACAG+AGG - chr5_4:64526700-64526719 Msa0864290:intron 40.0%
TCAAGCCCATAATTTCCACA+AGG + chr5_4:64526810-64526829 None:intergenic 40.0%
AGAAGCGAAGCAAATGAAAC+AGG - chr5_4:64526875-64526894 Msa0864290:CDS 40.0%
TGAAACAGGAAGATACAGAG+TGG - chr5_4:64526889-64526908 Msa0864290:CDS 40.0%
CCCATGCTAATATATAAGCC+TGG + chr5_4:64526966-64526985 None:intergenic 40.0%
!!! AAGGGTACTTTTGTCGTTCT+CGG + chr5_4:64524849-64524868 None:intergenic 40.0%
ATATTGAACCACCCACTCAA+GGG + chr5_4:64524867-64524886 None:intergenic 40.0%
AATATTGAACCACCCACTCA+AGG + chr5_4:64524868-64524887 None:intergenic 40.0%
!!! CCTAATTTTAGGGTTTGGGA+GGG + chr5_4:64524900-64524919 None:intergenic 40.0%
CCTCCCAAACCCTAAAATTA+GGG - chr5_4:64524898-64524917 Msa0864290:three_prime_UTR 40.0%
CCATGGATTTCAATGCGAAA+TGG + chr5_4:64525003-64525022 None:intergenic 40.0%
CCATTTCGCATTGAAATCCA+TGG - chr5_4:64525000-64525019 Msa0864290:three_prime_UTR 40.0%
! TTGTTGTTGAATGGGAGAAG+TGG + chr5_4:64525061-64525080 None:intergenic 40.0%
!! GTCATCGTCTTGTTGTTGAA+TGG + chr5_4:64525070-64525089 None:intergenic 40.0%
AGAACTTAACACATTCGGCA+AGG + chr5_4:64525454-64525473 None:intergenic 40.0%
GGCACCTATTGTAGAAAAGA+TGG - chr5_4:64525633-64525652 Msa0864290:intron 40.0%
! ACAATCAAGCCTTATCAGTG+GGG + chr5_4:64525800-64525819 None:intergenic 40.0%
! CAACAATCAAGCCTTATCAG+TGG + chr5_4:64525802-64525821 None:intergenic 40.0%
! TTGTTGGTTGTAGACACTGA+TGG - chr5_4:64526109-64526128 Msa0864290:intron 40.0%
TGGATTTGTGATTCCGAGTT+TGG - chr5_4:64526129-64526148 Msa0864290:intron 40.0%
GGATTTGTGATTCCGAGTTT+GGG - chr5_4:64526130-64526149 Msa0864290:intron 40.0%
GAGTCTTCAATTCCCAAACT+CGG + chr5_4:64526145-64526164 None:intergenic 40.0%
ATCTCCAAATTCTGCTGCAA+AGG - chr5_4:64526198-64526217 Msa0864290:intron 40.0%
!!! TGTTGTTTTGATTGCGAAGG+AGG + chr5_4:64526377-64526396 None:intergenic 40.0%
AAGAGGTGATTCCATCAAAC+CGG - chr5_4:64526396-64526415 Msa0864290:intron 40.0%
GATAAGAGAATTAGTGGGAC+AGG - chr5_4:64526452-64526471 Msa0864290:intron 40.0%
! ATTCAAGACATGGGTTACAG+AGG - chr5_4:64526700-64526719 Msa0864290:intron 40.0%
TCAAGCCCATAATTTCCACA+AGG + chr5_4:64526810-64526829 None:intergenic 40.0%
AGAAGCGAAGCAAATGAAAC+AGG - chr5_4:64526875-64526894 Msa0864290:CDS 40.0%
TGAAACAGGAAGATACAGAG+TGG - chr5_4:64526889-64526908 Msa0864290:CDS 40.0%
CCCATGCTAATATATAAGCC+TGG + chr5_4:64526966-64526985 None:intergenic 40.0%
!! ACGACAAAAGTACCCTTGAG+TGG - chr5_4:64524852-64524871 Msa0864290:three_prime_UTR 45.0%
!! CGACAAAAGTACCCTTGAGT+GGG - chr5_4:64524853-64524872 Msa0864290:three_prime_UTR 45.0%
CCCTCCCAAACCCTAAAATT+AGG - chr5_4:64524897-64524916 Msa0864290:three_prime_UTR 45.0%
!!! CCCTAATTTTAGGGTTTGGG+AGG + chr5_4:64524901-64524920 None:intergenic 45.0%
!! GAAGTGGATTGCAGTGAAGA+GGG + chr5_4:64525045-64525064 None:intergenic 45.0%
!! AGAAGTGGATTGCAGTGAAG+AGG + chr5_4:64525046-64525065 None:intergenic 45.0%
AACAACAAGACGATGACGAG+TGG - chr5_4:64525073-64525092 Msa0864290:three_prime_UTR 45.0%
ACAACAAGACGATGACGAGT+GGG - chr5_4:64525074-64525093 Msa0864290:three_prime_UTR 45.0%
TATTAAGCCTAGCGGAGATG+AGG - chr5_4:64525535-64525554 Msa0864290:CDS 45.0%
AGGATGTTACGTTGGATGTG+TGG - chr5_4:64525555-64525574 Msa0864290:CDS 45.0%
AATACTAGCAAGAGATGGGG+TGG - chr5_4:64525609-64525628 Msa0864290:CDS 45.0%
!! AGATGGTGGAAAATGGGCTT+AGG - chr5_4:64525650-64525669 Msa0864290:intron 45.0%
! GAAAATGGGCTTAGGTGGTT+TGG - chr5_4:64525658-64525677 Msa0864290:intron 45.0%
CTGACCTTTGCAGCAGAATT+TGG + chr5_4:64526205-64526224 None:intergenic 45.0%
AACATCTATCTTGGCCCACA+CGG - chr5_4:64526347-64526366 Msa0864290:intron 45.0%
AGAGAATTAGTGGGACAGGT+AGG - chr5_4:64526456-64526475 Msa0864290:intron 45.0%
GAGAATTAGTGGGACAGGTA+GGG - chr5_4:64526457-64526476 Msa0864290:intron 45.0%
GACAGGTAGGGAGAATAAAG+TGG - chr5_4:64526469-64526488 Msa0864290:intron 45.0%
ATCTAACCAGTCCTTAGGAG+AGG + chr5_4:64526552-64526571 None:intergenic 45.0%
TGTGGATCTAACCAGTCCTT+AGG + chr5_4:64526557-64526576 None:intergenic 45.0%
AACTCAGCTTCATGGCAATG+TGG + chr5_4:64526575-64526594 None:intergenic 45.0%
TCCTCTCAAACTCAGCTTCA+TGG + chr5_4:64526583-64526602 None:intergenic 45.0%
ATGAAGCTGAGTTTGAGAGG+AGG - chr5_4:64526582-64526601 Msa0864290:intron 45.0%
!! ACGACAAAAGTACCCTTGAG+TGG - chr5_4:64524852-64524871 Msa0864290:three_prime_UTR 45.0%
!! CGACAAAAGTACCCTTGAGT+GGG - chr5_4:64524853-64524872 Msa0864290:three_prime_UTR 45.0%
CCCTCCCAAACCCTAAAATT+AGG - chr5_4:64524897-64524916 Msa0864290:three_prime_UTR 45.0%
!!! CCCTAATTTTAGGGTTTGGG+AGG + chr5_4:64524901-64524920 None:intergenic 45.0%
!! GAAGTGGATTGCAGTGAAGA+GGG + chr5_4:64525045-64525064 None:intergenic 45.0%
!! AGAAGTGGATTGCAGTGAAG+AGG + chr5_4:64525046-64525065 None:intergenic 45.0%
AACAACAAGACGATGACGAG+TGG - chr5_4:64525073-64525092 Msa0864290:three_prime_UTR 45.0%
ACAACAAGACGATGACGAGT+GGG - chr5_4:64525074-64525093 Msa0864290:three_prime_UTR 45.0%
TATTAAGCCTAGCGGAGATG+AGG - chr5_4:64525535-64525554 Msa0864290:CDS 45.0%
AGGATGTTACGTTGGATGTG+TGG - chr5_4:64525555-64525574 Msa0864290:CDS 45.0%
AATACTAGCAAGAGATGGGG+TGG - chr5_4:64525609-64525628 Msa0864290:CDS 45.0%
!! AGATGGTGGAAAATGGGCTT+AGG - chr5_4:64525650-64525669 Msa0864290:intron 45.0%
! GAAAATGGGCTTAGGTGGTT+TGG - chr5_4:64525658-64525677 Msa0864290:intron 45.0%
CTGACCTTTGCAGCAGAATT+TGG + chr5_4:64526205-64526224 None:intergenic 45.0%
AACATCTATCTTGGCCCACA+CGG - chr5_4:64526347-64526366 Msa0864290:intron 45.0%
AGAGAATTAGTGGGACAGGT+AGG - chr5_4:64526456-64526475 Msa0864290:intron 45.0%
GAGAATTAGTGGGACAGGTA+GGG - chr5_4:64526457-64526476 Msa0864290:intron 45.0%
GACAGGTAGGGAGAATAAAG+TGG - chr5_4:64526469-64526488 Msa0864290:intron 45.0%
ATCTAACCAGTCCTTAGGAG+AGG + chr5_4:64526552-64526571 None:intergenic 45.0%
TGTGGATCTAACCAGTCCTT+AGG + chr5_4:64526557-64526576 None:intergenic 45.0%
AACTCAGCTTCATGGCAATG+TGG + chr5_4:64526575-64526594 None:intergenic 45.0%
TCCTCTCAAACTCAGCTTCA+TGG + chr5_4:64526583-64526602 None:intergenic 45.0%
ATGAAGCTGAGTTTGAGAGG+AGG - chr5_4:64526582-64526601 Msa0864290:intron 45.0%
!! CAAAAGTACCCTTGAGTGGG+TGG - chr5_4:64524856-64524875 Msa0864290:three_prime_UTR 50.0%
CCATGGTAAAGCGATGACCA+TGG + chr5_4:64525020-64525039 None:intergenic 50.0%
CCATGGTCATCGCTTTACCA+TGG - chr5_4:64525017-64525036 Msa0864290:three_prime_UTR 50.0%
CAACAAGACGATGACGAGTG+GGG - chr5_4:64525075-64525094 Msa0864290:three_prime_UTR 50.0%
GTAACATCCTCATCTCCGCT+AGG + chr5_4:64525545-64525564 None:intergenic 50.0%
CGGAGATGAGGATGTTACGT+TGG - chr5_4:64525547-64525566 Msa0864290:CDS 50.0%
! TGGTGGAAAATGGGCTTAGG+TGG - chr5_4:64525653-64525672 Msa0864290:intron 50.0%
! TCAAGCCTTATCAGTGGGGT+CGG + chr5_4:64525796-64525815 None:intergenic 50.0%
TTCCATCAAACCGGAAGCAG+CGG - chr5_4:64526405-64526424 Msa0864290:intron 50.0%
TTTGCTTGAACCGCTGCTTC+CGG + chr5_4:64526418-64526437 None:intergenic 50.0%
GATAACCTGAGGGAGCTTGT+AGG - chr5_4:64526491-64526510 Msa0864290:intron 50.0%
!! GGAGAAAGCAAGTGTTGGCA+TGG - chr5_4:64526517-64526536 Msa0864290:intron 50.0%
!! AGCAAGTGTTGGCATGGCAA+AGG - chr5_4:64526523-64526542 Msa0864290:intron 50.0%
!! GCAAGTGTTGGCATGGCAAA+GGG - chr5_4:64526524-64526543 Msa0864290:intron 50.0%
GCCATGAAGCTGAGTTTGAG+AGG - chr5_4:64526579-64526598 Msa0864290:intron 50.0%
!! CAAAAGTACCCTTGAGTGGG+TGG - chr5_4:64524856-64524875 Msa0864290:three_prime_UTR 50.0%
CCATGGTAAAGCGATGACCA+TGG + chr5_4:64525020-64525039 None:intergenic 50.0%
CCATGGTCATCGCTTTACCA+TGG - chr5_4:64525017-64525036 Msa0864290:three_prime_UTR 50.0%
CAACAAGACGATGACGAGTG+GGG - chr5_4:64525075-64525094 Msa0864290:three_prime_UTR 50.0%
GTAACATCCTCATCTCCGCT+AGG + chr5_4:64525545-64525564 None:intergenic 50.0%
CGGAGATGAGGATGTTACGT+TGG - chr5_4:64525547-64525566 Msa0864290:CDS 50.0%
! TGGTGGAAAATGGGCTTAGG+TGG - chr5_4:64525653-64525672 Msa0864290:intron 50.0%
! TCAAGCCTTATCAGTGGGGT+CGG + chr5_4:64525796-64525815 None:intergenic 50.0%
TTCCATCAAACCGGAAGCAG+CGG - chr5_4:64526405-64526424 Msa0864290:intron 50.0%
TTTGCTTGAACCGCTGCTTC+CGG + chr5_4:64526418-64526437 None:intergenic 50.0%
GATAACCTGAGGGAGCTTGT+AGG - chr5_4:64526491-64526510 Msa0864290:intron 50.0%
!! GGAGAAAGCAAGTGTTGGCA+TGG - chr5_4:64526517-64526536 Msa0864290:intron 50.0%
!! AGCAAGTGTTGGCATGGCAA+AGG - chr5_4:64526523-64526542 Msa0864290:intron 50.0%
!! GCAAGTGTTGGCATGGCAAA+GGG - chr5_4:64526524-64526543 Msa0864290:intron 50.0%
GCCATGAAGCTGAGTTTGAG+AGG - chr5_4:64526579-64526598 Msa0864290:intron 50.0%
GGGCGATAAAGCCCGATTGA+TGG + chr5_4:64524982-64525001 None:intergenic 55.0%
TTGCAGTGAAGAGGGCTCCA+TGG + chr5_4:64525037-64525056 None:intergenic 55.0%
ACTAGCAAGAGATGGGGTGG+TGG - chr5_4:64525612-64525631 Msa0864290:CDS 55.0%
TTATCAGTGGGGTCGGCACA+TGG + chr5_4:64525789-64525808 None:intergenic 55.0%
! ATGTGCCGACCCCACTGATA+AGG - chr5_4:64525788-64525807 Msa0864290:CDS 55.0%
! AACCGCTGCTTCCGGTTTGA+TGG + chr5_4:64526410-64526429 None:intergenic 55.0%
AACCTGAGGGAGCTTGTAGG+TGG - chr5_4:64526494-64526513 Msa0864290:intron 55.0%
ACCTGAGGGAGCTTGTAGGT+GGG - chr5_4:64526495-64526514 Msa0864290:intron 55.0%
GGTGGGGAGAAAGCAAGTGT+TGG - chr5_4:64526512-64526531 Msa0864290:intron 55.0%
GGCAAAGGGATCCTCTCCTA+AGG - chr5_4:64526538-64526557 Msa0864290:intron 55.0%
AGGGATCCTCTCCTAAGGAC+TGG - chr5_4:64526543-64526562 Msa0864290:intron 55.0%
GGGCGATAAAGCCCGATTGA+TGG + chr5_4:64524982-64525001 None:intergenic 55.0%
TTGCAGTGAAGAGGGCTCCA+TGG + chr5_4:64525037-64525056 None:intergenic 55.0%
ACTAGCAAGAGATGGGGTGG+TGG - chr5_4:64525612-64525631 Msa0864290:CDS 55.0%
TTATCAGTGGGGTCGGCACA+TGG + chr5_4:64525789-64525808 None:intergenic 55.0%
! ATGTGCCGACCCCACTGATA+AGG - chr5_4:64525788-64525807 Msa0864290:CDS 55.0%
! AACCGCTGCTTCCGGTTTGA+TGG + chr5_4:64526410-64526429 None:intergenic 55.0%
AACCTGAGGGAGCTTGTAGG+TGG - chr5_4:64526494-64526513 Msa0864290:intron 55.0%
ACCTGAGGGAGCTTGTAGGT+GGG - chr5_4:64526495-64526514 Msa0864290:intron 55.0%
GGTGGGGAGAAAGCAAGTGT+TGG - chr5_4:64526512-64526531 Msa0864290:intron 55.0%
GGCAAAGGGATCCTCTCCTA+AGG - chr5_4:64526538-64526557 Msa0864290:intron 55.0%
AGGGATCCTCTCCTAAGGAC+TGG - chr5_4:64526543-64526562 Msa0864290:intron 55.0%
CCTGAGGGAGCTTGTAGGTG+GGG - chr5_4:64526496-64526515 Msa0864290:intron 60.0%
CCTGAGGGAGCTTGTAGGTG+GGG - chr5_4:64526496-64526515 Msa0864290:intron 60.0%
CCCCACCTACAAGCTCCCTC+AGG + chr5_4:64526499-64526518 None:intergenic 65.0%
CCCCACCTACAAGCTCCCTC+AGG + chr5_4:64526499-64526518 None:intergenic 65.0%
!! GCGAAGGAGGCGCTCCGTGT+GGG + chr5_4:64526364-64526383 None:intergenic 70.0%
!! TGCGAAGGAGGCGCTCCGTG+TGG + chr5_4:64526365-64526384 None:intergenic 70.0%
!! GCGAAGGAGGCGCTCCGTGT+GGG + chr5_4:64526364-64526383 None:intergenic 70.0%
!! TGCGAAGGAGGCGCTCCGTG+TGG + chr5_4:64526365-64526384 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 64524839 64527127 64524839 ID=Msa0864290;Name=Msa0864290
chr5_4 mRNA 64524839 64527127 64524839 ID=Msa0864290-mRNA-1;Parent=Msa0864290;Name=Msa0864290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=197|1|1|1|1|1|3|520|144
chr5_4 exon 64524839 64525634 64524839 ID=Msa0864290-mRNA-1:exon:20313;Parent=Msa0864290-mRNA-1
chr5_4 exon 64525747 64525844 64525747 ID=Msa0864290-mRNA-1:exon:20312;Parent=Msa0864290-mRNA-1
chr5_4 exon 64526870 64527127 64526870 ID=Msa0864290-mRNA-1:exon:20311;Parent=Msa0864290-mRNA-1
chr5_4 five_prime_UTR 64526931 64527127 64526931 ID=Msa0864290-mRNA-1:five_prime_utr;Parent=Msa0864290-mRNA-1
chr5_4 CDS 64526870 64526930 64526870 ID=Msa0864290-mRNA-1:cds;Parent=Msa0864290-mRNA-1
chr5_4 CDS 64525747 64525844 64525747 ID=Msa0864290-mRNA-1:cds;Parent=Msa0864290-mRNA-1
chr5_4 CDS 64525359 64525634 64525359 ID=Msa0864290-mRNA-1:cds;Parent=Msa0864290-mRNA-1
chr5_4 three_prime_UTR 64524839 64525358 64524839 ID=Msa0864290-mRNA-1:three_prime_utr;Parent=Msa0864290-mRNA-1
Gene Sequence

>Msa0864290

ATGGAGCCCTCTTCACTGCAATCCACTTCTCCCATTCAACAACAAGACGATGACGAGTGGGACACTGATGGATTTGTGATTCCGAGTTTGGGAATTGAAGACTCTGATCAAAGTAAAAACAATGCTGCAAGCATAGAATCTCCAAATTCTGCTGCAAAGAATAAGAAGGAAGAGAACATCTATCTTGGCCCACACGGAGCGCCTCCTTCGCAATCAAAACAACAAGAGGTGATTCCATCAAACCGGAAGCAGCGGTTCAAGCAAAAGCTGAAAGAAGCTGATAAGAGAATTAGTGGGACAGGTAGGGAGAATAAAGTGGATAACCTGAGGGAGCTTGTAGGTGGGGAGAAAGCAAGTGTTGGCATGGCAAAGGGATCCTCTCCTAAGGACTGGTTAGATCCACATTGCCATGAAGCTGAGTTTGAGAGGAGGTGA
Protein sequence

>Msa0864290

MEPSSLQSTSPIQQQDDDEWDTDGFVIPSLGIEDSDQSKNNAASIESPNSAAKNKKEENIYLGPHGAPPSQSKQQEVIPSNRKQRFKQKLKEADKRISGTGRENKVDNLRELVGGEKASVGMAKGSSPKDWLDPHCHEAEFERR*