Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176330 | sp|Q5EA37|YJU2B_BOVIN | 45.862 | 290 | 144 | 6 | 11 | 288 | 8 | 296 | 7.91e-73 | 233 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176330 | G7I4X2 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 626 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005270 | Msa0176330 | 0.812018 | 5.234922e-51 | -8.615850e-47 |
Msa0008220 | Msa0176330 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
Msa0008840 | Msa0176330 | 0.837814 | 4.161818e-57 | -8.615850e-47 |
Msa0017320 | Msa0176330 | 0.813148 | 2.963126e-51 | -8.615850e-47 |
Msa0026660 | Msa0176330 | 0.823003 | 1.749546e-53 | -8.615850e-47 |
Msa0036370 | Msa0176330 | 0.844570 | 6.964571e-59 | -8.615850e-47 |
Msa0038870 | Msa0176330 | 0.831723 | 1.420299e-55 | -8.615850e-47 |
Msa0043730 | Msa0176330 | 0.839097 | 1.942733e-57 | -8.615850e-47 |
Msa0052860 | Msa0176330 | 0.821412 | 4.094276e-53 | -8.615850e-47 |
Msa0055100 | Msa0176330 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
Msa0057370 | Msa0176330 | 0.800765 | 1.235948e-48 | -8.615850e-47 |
Msa0057750 | Msa0176330 | 0.832659 | 8.330601e-56 | -8.615850e-47 |
Msa0059890 | Msa0176330 | 0.806945 | 6.428799e-50 | -8.615850e-47 |
Msa0065010 | Msa0176330 | 0.812209 | 4.757907e-51 | -8.615850e-47 |
Msa0065650 | Msa0176330 | 0.827419 | 1.580564e-54 | -8.615850e-47 |
Msa0065950 | Msa0176330 | 0.817501 | 3.191721e-52 | -8.615850e-47 |
Msa0072170 | Msa0176330 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
Msa0074750 | Msa0176330 | 0.820269 | 7.498438e-53 | -8.615850e-47 |
Msa0081650 | Msa0176330 | 0.800331 | 1.515553e-48 | -8.615850e-47 |
Msa0084430 | Msa0176330 | 0.962738 | 3.093767e-121 | -8.615850e-47 |
Msa0085720 | Msa0176330 | 0.812789 | 3.552751e-51 | -8.615850e-47 |
Msa0086420 | Msa0176330 | 0.806982 | 6.313888e-50 | -8.615850e-47 |
Msa0090030 | Msa0176330 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
Msa0090550 | Msa0176330 | 0.805880 | 1.078147e-49 | -8.615850e-47 |
Msa0091500 | Msa0176330 | 0.800962 | 1.126472e-48 | -8.615850e-47 |
Msa0092170 | Msa0176330 | 0.829917 | 3.934950e-55 | -8.615850e-47 |
Msa0100800 | Msa0176330 | 0.802583 | 5.237816e-49 | -8.615850e-47 |
Msa0101180 | Msa0176330 | 0.800993 | 1.110312e-48 | -8.615850e-47 |
Msa0103070 | Msa0176330 | 0.833803 | 4.323478e-56 | -8.615850e-47 |
Msa0109590 | Msa0176330 | 0.826340 | 2.862039e-54 | -8.615850e-47 |
Msa0111080 | Msa0176330 | 0.820285 | 7.437853e-53 | -8.615850e-47 |
Msa0115460 | Msa0176330 | 0.804715 | 1.890868e-49 | -8.615850e-47 |
Msa0118540 | Msa0176330 | 0.807313 | 5.372257e-50 | -8.615850e-47 |
Msa0120340 | Msa0176330 | 0.800114 | 1.677636e-48 | -8.615850e-47 |
Msa0120540 | Msa0176330 | 0.817977 | 2.492338e-52 | -8.615850e-47 |
Msa0124550 | Msa0176330 | 0.803783 | 2.956486e-49 | -8.615850e-47 |
Msa0126880 | Msa0176330 | 0.804702 | 1.902619e-49 | -8.615850e-47 |
Msa0126910 | Msa0176330 | 0.801194 | 1.010326e-48 | -8.615850e-47 |
Msa0130520 | Msa0176330 | 0.875683 | 2.540191e-68 | -8.615850e-47 |
Msa0131450 | Msa0176330 | 0.822107 | 2.827513e-53 | -8.615850e-47 |
Msa0138020 | Msa0176330 | 0.808240 | 3.413075e-50 | -8.615850e-47 |
Msa0140400 | Msa0176330 | 0.811723 | 6.071437e-51 | -8.615850e-47 |
Msa0140510 | Msa0176330 | -0.810376 | 1.188630e-50 | -8.615850e-47 |
Msa0140520 | Msa0176330 | -0.817650 | 2.954786e-52 | -8.615850e-47 |
Msa0142500 | Msa0176330 | 0.825308 | 5.030460e-54 | -8.615850e-47 |
Msa0145150 | Msa0176330 | 0.839570 | 1.463880e-57 | -8.615850e-47 |
Msa0154920 | Msa0176330 | 0.840099 | 1.065961e-57 | -8.615850e-47 |
Msa0165970 | Msa0176330 | 0.805537 | 1.272365e-49 | -8.615850e-47 |
Msa0167980 | Msa0176330 | 0.804589 | 2.009126e-49 | -8.615850e-47 |
Msa0171980 | Msa0176330 | 0.816600 | 5.085744e-52 | -8.615850e-47 |
Msa0175200 | Msa0176330 | 0.811146 | 8.101885e-51 | -8.615850e-47 |
Msa0176330 | Msa0177270 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
Msa0176330 | Msa0183870 | 0.820906 | 5.353311e-53 | -8.615850e-47 |
Msa0176330 | Msa0186310 | 0.801083 | 1.064551e-48 | -8.615850e-47 |
Msa0176330 | Msa0187060 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
Msa0176330 | Msa0187490 | 0.837460 | 5.132262e-57 | -8.615850e-47 |
Msa0176330 | Msa0193600 | 0.806279 | 8.885096e-50 | -8.615850e-47 |
Msa0176330 | Msa0198940 | 0.810040 | 1.404589e-50 | -8.615850e-47 |
Msa0176330 | Msa0202930 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
Msa0176330 | Msa0212750 | -0.801462 | 8.903728e-49 | -8.615850e-47 |
Msa0176330 | Msa0225210 | 0.804408 | 2.191168e-49 | -8.615850e-47 |
Msa0176330 | Msa0229360 | 0.821813 | 3.306544e-53 | -8.615850e-47 |
Msa0176330 | Msa0233370 | 0.809811 | 1.573576e-50 | -8.615850e-47 |
Msa0176330 | Msa0241740 | 0.848020 | 7.995904e-60 | -8.615850e-47 |
Msa0176330 | Msa0251770 | 0.818294 | 2.112865e-52 | -8.615850e-47 |
Msa0176330 | Msa0262370 | 0.811289 | 7.541253e-51 | -8.615850e-47 |
Msa0176330 | Msa0265160 | 0.822865 | 1.884565e-53 | -8.615850e-47 |
Msa0176330 | Msa0266210 | 0.819232 | 1.293770e-52 | -8.615850e-47 |
Msa0176330 | Msa0266240 | 0.806900 | 6.571891e-50 | -8.615850e-47 |
Msa0176330 | Msa0271580 | 0.813302 | 2.741694e-51 | -8.615850e-47 |
Msa0176330 | Msa0271790 | 0.807542 | 4.803293e-50 | -8.615850e-47 |
Msa0176330 | Msa0273650 | 0.801468 | 8.877313e-49 | -8.615850e-47 |
Msa0176330 | Msa0281480 | 0.802839 | 4.636685e-49 | -8.615850e-47 |
Msa0176330 | Msa0284820 | 0.806186 | 9.295915e-50 | -8.615850e-47 |
Msa0176330 | Msa0287670 | 0.818400 | 1.999760e-52 | -8.615850e-47 |
Msa0176330 | Msa0290760 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
Msa0176330 | Msa0299520 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
Msa0176330 | Msa0304840 | 0.810390 | 1.180474e-50 | -8.615850e-47 |
Msa0176330 | Msa0307560 | 0.823524 | 1.322337e-53 | -8.615850e-47 |
Msa0176330 | Msa0308200 | 0.803482 | 3.413713e-49 | -8.615850e-47 |
Msa0176330 | Msa0310430 | 0.814895 | 1.220322e-51 | -8.615850e-47 |
Msa0176330 | Msa0313930 | 0.801632 | 8.217048e-49 | -8.615850e-47 |
Msa0176330 | Msa0319130 | 0.803916 | 2.773595e-49 | -8.615850e-47 |
Msa0176330 | Msa0320610 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
Msa0176330 | Msa0329430 | 0.804606 | 1.993218e-49 | -8.615850e-47 |
Msa0176330 | Msa0337060 | 0.802169 | 6.372285e-49 | -8.615850e-47 |
Msa0176330 | Msa0340710 | 0.805526 | 1.279339e-49 | -8.615850e-47 |
Msa0176330 | Msa0347610 | 0.813177 | 2.920448e-51 | -8.615850e-47 |
Msa0176330 | Msa0347750 | 0.802782 | 4.765330e-49 | -8.615850e-47 |
Msa0176330 | Msa0377530 | 0.801183 | 1.015219e-48 | -8.615850e-47 |
Msa0176330 | Msa0385490 | 0.818486 | 1.911842e-52 | -8.615850e-47 |
Msa0176330 | Msa0387050 | 0.811825 | 5.767578e-51 | -8.615850e-47 |
Msa0176330 | Msa0388030 | -0.805604 | 1.231988e-49 | -8.615850e-47 |
Msa0176330 | Msa0389810 | 0.806462 | 8.131855e-50 | -8.615850e-47 |
Msa0176330 | Msa0392270 | 0.831229 | 1.879031e-55 | -8.615850e-47 |
Msa0176330 | Msa0408390 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
Msa0176330 | Msa0417650 | 0.806206 | 9.204395e-50 | -8.615850e-47 |
Msa0176330 | Msa0429950 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
Msa0176330 | Msa0430870 | 0.808923 | 2.439925e-50 | -8.615850e-47 |
Msa0176330 | Msa0430950 | 0.805630 | 1.216933e-49 | -8.615850e-47 |
Msa0176330 | Msa0433530 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
Msa0176330 | Msa0435220 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
Msa0176330 | Msa0436190 | 0.845902 | 3.039950e-59 | -8.615850e-47 |
Msa0176330 | Msa0439890 | 0.812035 | 5.191475e-51 | -8.615850e-47 |
Msa0176330 | Msa0464900 | 0.804796 | 1.819242e-49 | -8.615850e-47 |
Msa0176330 | Msa0468130 | 0.812523 | 4.061475e-51 | -8.615850e-47 |
Msa0176330 | Msa0468320 | 0.805211 | 1.489274e-49 | -8.615850e-47 |
Msa0176330 | Msa0471900 | 0.812960 | 3.259543e-51 | -8.615850e-47 |
Msa0176330 | Msa0477260 | 0.822146 | 2.769185e-53 | -8.615850e-47 |
Msa0176330 | Msa0481280 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
Msa0176330 | Msa0482180 | 0.826302 | 2.922856e-54 | -8.615850e-47 |
Msa0176330 | Msa0485490 | 0.815293 | 9.956652e-52 | -8.615850e-47 |
Msa0176330 | Msa0489610 | 0.835865 | 1.308244e-56 | -8.615850e-47 |
Msa0176330 | Msa0500720 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
Msa0176330 | Msa0505060 | 0.804447 | 2.151363e-49 | -8.615850e-47 |
Msa0176330 | Msa0517490 | 0.805582 | 1.245025e-49 | -8.615850e-47 |
Msa0176330 | Msa0524600 | 0.851019 | 1.165543e-60 | -8.615850e-47 |
Msa0176330 | Msa0530650 | 0.814391 | 1.577995e-51 | -8.615850e-47 |
Msa0176330 | Msa0534410 | 0.852077 | 5.849757e-61 | -8.615850e-47 |
Msa0176330 | Msa0549780 | 0.820338 | 7.230387e-53 | -8.615850e-47 |
Msa0176330 | Msa0555640 | 0.800400 | 1.466947e-48 | -8.615850e-47 |
Msa0176330 | Msa0556790 | 0.821412 | 4.094767e-53 | -8.615850e-47 |
Msa0176330 | Msa0556860 | 0.806183 | 9.307275e-50 | -8.615850e-47 |
Msa0176330 | Msa0557950 | -0.802583 | 5.237857e-49 | -8.615850e-47 |
Msa0176330 | Msa0567240 | 0.806168 | 9.375360e-50 | -8.615850e-47 |
Msa0176330 | Msa0579370 | 0.815512 | 8.900119e-52 | -8.615850e-47 |
Msa0176330 | Msa0582280 | 0.803525 | 3.344640e-49 | -8.615850e-47 |
Msa0176330 | Msa0587030 | 0.826623 | 2.450568e-54 | -8.615850e-47 |
Msa0176330 | Msa0587190 | 0.841682 | 4.097336e-58 | -8.615850e-47 |
Msa0176330 | Msa0588240 | 0.836381 | 9.675509e-57 | -8.615850e-47 |
Msa0176330 | Msa0590650 | 0.843849 | 1.088094e-58 | -8.615850e-47 |
Msa0176330 | Msa0594200 | 0.822216 | 2.667695e-53 | -8.615850e-47 |
Msa0176330 | Msa0614990 | 0.810320 | 1.222327e-50 | -8.615850e-47 |
Msa0176330 | Msa0615340 | 0.808912 | 2.453347e-50 | -8.615850e-47 |
Msa0176330 | Msa0617260 | 0.807117 | 5.910703e-50 | -8.615850e-47 |
Msa0176330 | Msa0619920 | 0.801807 | 7.564697e-49 | -8.615850e-47 |
Msa0176330 | Msa0620330 | 0.814259 | 1.687496e-51 | -8.615850e-47 |
Msa0176330 | Msa0621650 | 0.813132 | 2.988125e-51 | -8.615850e-47 |
Msa0176330 | Msa0625840 | -0.801511 | 8.699731e-49 | -8.615850e-47 |
Msa0176330 | Msa0626220 | 0.839272 | 1.749896e-57 | -8.615850e-47 |
Msa0176330 | Msa0626850 | 0.821639 | 3.627206e-53 | -8.615850e-47 |
Msa0176330 | Msa0626940 | 0.832459 | 9.337755e-56 | -8.615850e-47 |
Msa0176330 | Msa0626990 | 0.824288 | 8.756727e-54 | -8.615850e-47 |
Msa0176330 | Msa0627350 | 0.819459 | 1.148538e-52 | -8.615850e-47 |
Msa0176330 | Msa0628290 | 0.833216 | 6.057441e-56 | -8.615850e-47 |
Msa0176330 | Msa0628740 | 0.801539 | 8.586372e-49 | -8.615850e-47 |
Msa0176330 | Msa0630950 | 0.846307 | 2.357848e-59 | -8.615850e-47 |
Msa0176330 | Msa0640940 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
Msa0176330 | Msa0652300 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
Msa0176330 | Msa0653320 | -0.808457 | 3.068672e-50 | -8.615850e-47 |
Msa0176330 | Msa0661090 | 0.821583 | 3.737012e-53 | -8.615850e-47 |
Msa0176330 | Msa0664970 | 0.842442 | 2.579623e-58 | -8.615850e-47 |
Msa0176330 | Msa0665080 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
Msa0176330 | Msa0666140 | 0.802461 | 5.550243e-49 | -8.615850e-47 |
Msa0176330 | Msa0669190 | 0.813896 | 2.029129e-51 | -8.615850e-47 |
Msa0176330 | Msa0669720 | 0.802733 | 4.877926e-49 | -8.615850e-47 |
Msa0176330 | Msa0673470 | 0.815279 | 1.002654e-51 | -8.615850e-47 |
Msa0176330 | Msa0679550 | 0.852316 | 5.002000e-61 | -8.615850e-47 |
Msa0176330 | Msa0689420 | 0.807704 | 4.438162e-50 | -8.615850e-47 |
Msa0176330 | Msa0689780 | 0.803345 | 3.643639e-49 | -8.615850e-47 |
Msa0176330 | Msa0693790 | 0.835661 | 1.473586e-56 | -8.615850e-47 |
Msa0176330 | Msa0694840 | 0.805746 | 1.150080e-49 | -8.615850e-47 |
Msa0176330 | Msa0696420 | 0.807870 | 4.092341e-50 | -8.615850e-47 |
Msa0176330 | Msa0700230 | 0.803348 | 3.638232e-49 | -8.615850e-47 |
Msa0176330 | Msa0713350 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
Msa0176330 | Msa0715150 | 0.803123 | 4.051488e-49 | -8.615850e-47 |
Msa0176330 | Msa0715410 | 0.823560 | 1.297202e-53 | -8.615850e-47 |
Msa0176330 | Msa0726080 | 0.805240 | 1.468618e-49 | -8.615850e-47 |
Msa0176330 | Msa0726860 | 0.807922 | 3.988163e-50 | -8.615850e-47 |
Msa0176330 | Msa0731180 | 0.822719 | 2.037425e-53 | -8.615850e-47 |
Msa0176330 | Msa0732600 | 0.829450 | 5.113761e-55 | -8.615850e-47 |
Msa0176330 | Msa0742150 | 0.808820 | 2.566498e-50 | -8.615850e-47 |
Msa0176330 | Msa0743530 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
Msa0176330 | Msa0748070 | 0.805089 | 1.579590e-49 | -8.615850e-47 |
Msa0176330 | Msa0748730 | 0.809104 | 2.231255e-50 | -8.615850e-47 |
Msa0176330 | Msa0749440 | 0.804211 | 2.408497e-49 | -8.615850e-47 |
Msa0176330 | Msa0750850 | 0.813580 | 2.381731e-51 | -8.615850e-47 |
Msa0176330 | Msa0758130 | 0.816079 | 6.651777e-52 | -8.615850e-47 |
Msa0176330 | Msa0763920 | 0.803399 | 3.551844e-49 | -8.615850e-47 |
Msa0176330 | Msa0765180 | 0.808047 | 3.751362e-50 | -8.615850e-47 |
Msa0176330 | Msa0771580 | 0.818269 | 2.140317e-52 | -8.615850e-47 |
Msa0176330 | Msa0780880 | 0.806597 | 7.614603e-50 | -8.615850e-47 |
Msa0176330 | Msa0794320 | 0.805378 | 1.374227e-49 | -8.615850e-47 |
Msa0176330 | Msa0805920 | 0.802506 | 5.432707e-49 | -8.615850e-47 |
Msa0176330 | Msa0811040 | 0.811630 | 6.359908e-51 | -8.615850e-47 |
Msa0176330 | Msa0817120 | 0.806741 | 7.099984e-50 | -8.615850e-47 |
Msa0176330 | Msa0820530 | -0.838903 | 2.180912e-57 | -8.615850e-47 |
Msa0176330 | Msa0821800 | 0.805733 | 1.157811e-49 | -8.615850e-47 |
Msa0176330 | Msa0837780 | 0.807512 | 4.875663e-50 | -8.615850e-47 |
Msa0176330 | Msa0844110 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
Msa0176330 | Msa0846230 | 0.804316 | 2.290756e-49 | -8.615850e-47 |
Msa0176330 | Msa0861470 | 0.829662 | 4.540333e-55 | -8.615850e-47 |
Msa0176330 | Msa0861570 | 0.838787 | 2.336742e-57 | -8.615850e-47 |
Msa0176330 | Msa0861830 | 0.821277 | 4.398683e-53 | -8.615850e-47 |
Msa0176330 | Msa0866400 | 0.802679 | 5.003411e-49 | -8.615850e-47 |
Msa0176330 | Msa0879860 | 0.832192 | 1.087302e-55 | -8.615850e-47 |
Msa0176330 | Msa0901320 | 0.816701 | 4.828048e-52 | -8.615850e-47 |
Msa0176330 | Msa0905380 | 0.843083 | 1.742006e-58 | -8.615850e-47 |
Msa0176330 | Msa0909010 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
Msa0176330 | Msa0924150 | -0.803254 | 3.805842e-49 | -8.615850e-47 |
Msa0176330 | Msa0937330 | 0.847303 | 1.259388e-59 | -8.615850e-47 |
Msa0176330 | Msa0945100 | 0.810257 | 1.260867e-50 | -8.615850e-47 |
Msa0176330 | Msa0974630 | 0.804390 | 2.210936e-49 | -8.615850e-47 |
Msa0176330 | Msa0980020 | 0.804176 | 2.449550e-49 | -8.615850e-47 |
Msa0176330 | Msa0982270 | 0.805467 | 1.316493e-49 | -8.615850e-47 |
Msa0176330 | Msa0993240 | 0.818221 | 2.195382e-52 | -8.615850e-47 |
Msa0176330 | Msa0994370 | 0.830717 | 2.509196e-55 | -8.615850e-47 |
Msa0176330 | Msa0994390 | 0.803190 | 3.924151e-49 | -8.615850e-47 |
Msa0176330 | Msa1021510 | 0.821958 | 3.060854e-53 | -8.615850e-47 |
Msa0176330 | Msa1023180 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
Msa0176330 | Msa1029080 | -0.826724 | 2.318577e-54 | -8.615850e-47 |
Msa0176330 | Msa1031820 | 0.804678 | 1.925020e-49 | -8.615850e-47 |
Msa0176330 | Msa1033970 | 0.814613 | 1.408892e-51 | -8.615850e-47 |
Msa0176330 | Msa1034280 | 0.808868 | 2.506545e-50 | -8.615850e-47 |
Msa0176330 | Msa1036740 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
Msa0176330 | Msa1042660 | 0.814828 | 1.262623e-51 | -8.615850e-47 |
Msa0176330 | Msa1043050 | 0.819147 | 1.352904e-52 | -8.615850e-47 |
Msa0176330 | Msa1063420 | 0.806627 | 7.505629e-50 | -8.615850e-47 |
Msa0176330 | Msa1071320 | 0.842870 | 1.985325e-58 | -8.615850e-47 |
Msa0176330 | Msa1072900 | 0.808154 | 3.559533e-50 | -8.615850e-47 |
Msa0176330 | Msa1073830 | 0.821306 | 4.331529e-53 | -8.615850e-47 |
Msa0176330 | Msa1077070 | 0.824646 | 7.211628e-54 | -8.615850e-47 |
Msa0176330 | Msa1096550 | 0.813408 | 2.599156e-51 | -8.615850e-47 |
Msa0176330 | Msa1105500 | 0.819476 | 1.138610e-52 | -8.615850e-47 |
Msa0176330 | Msa1113590 | 0.806922 | 6.500418e-50 | -8.615850e-47 |
Msa0176330 | Msa1113880 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
Msa0176330 | Msa1122780 | 0.824799 | 6.634652e-54 | -8.615850e-47 |
Msa0176330 | Msa1130530 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
Msa0176330 | Msa1144040 | 0.800158 | 1.643168e-48 | -8.615850e-47 |
Msa0176330 | Msa1144970 | 0.823589 | 1.276830e-53 | -8.615850e-47 |
Msa0176330 | Msa1150710 | 0.818090 | 2.349550e-52 | -8.615850e-47 |
Msa0176330 | Msa1152520 | 0.809818 | 1.568092e-50 | -8.615850e-47 |
Msa0176330 | Msa1156170 | -0.821273 | 4.407518e-53 | -8.615850e-47 |
Msa0176330 | Msa1160360 | 0.826342 | 2.858979e-54 | -8.615850e-47 |
Msa0176330 | Msa1163870 | 0.811920 | 5.498742e-51 | -8.615850e-47 |
Msa0176330 | Msa1164020 | 0.831245 | 1.861697e-55 | -8.615850e-47 |
Msa0176330 | Msa1172130 | -0.802420 | 5.657741e-49 | -8.615850e-47 |
Msa0176330 | Msa1174310 | 0.841447 | 4.725985e-58 | -8.615850e-47 |
Msa0176330 | Msa1176360 | 0.827809 | 1.274185e-54 | -8.615850e-47 |
Msa0176330 | Msa1177780 | 0.806156 | 9.433141e-50 | -8.615850e-47 |
Msa0176330 | Msa1178050 | 0.801728 | 7.852834e-49 | -8.615850e-47 |
Msa0176330 | Msa1188600 | -0.806728 | 7.146222e-50 | -8.615850e-47 |
Msa0176330 | Msa1190970 | 0.824807 | 6.607485e-54 | -8.615850e-47 |
Msa0176330 | Msa1203880 | 0.801479 | 8.829960e-49 | -8.615850e-47 |
Msa0176330 | Msa1215920 | 0.810755 | 9.843228e-51 | -8.615850e-47 |
Msa0176330 | Msa1235400 | 0.822646 | 2.119453e-53 | -8.615850e-47 |
Msa0176330 | Msa1244640 | 0.818782 | 1.637956e-52 | -8.615850e-47 |
Msa0176330 | Msa1250110 | 0.810359 | 1.198576e-50 | -8.615850e-47 |
Msa0176330 | Msa1250730 | 0.810822 | 9.522860e-51 | -8.615850e-47 |
Msa0176330 | Msa1258370 | 0.820370 | 7.110028e-53 | -8.615850e-47 |
Msa0176330 | Msa1263290 | -0.816037 | 6.796436e-52 | -8.615850e-47 |
Msa0176330 | Msa1270660 | 0.845116 | 4.962440e-59 | -8.615850e-47 |
Msa0176330 | Msa1270730 | 0.840515 | 8.302356e-58 | -8.615850e-47 |
Msa0176330 | Msa1276440 | 0.831965 | 1.237246e-55 | -8.615850e-47 |
Msa0176330 | Msa1293590 | 0.831923 | 1.267545e-55 | -8.615850e-47 |
Msa0176330 | Msa1294080 | 0.803892 | 2.806795e-49 | -8.615850e-47 |
Msa0176330 | Msa1296300 | 0.820447 | 6.827867e-53 | -8.615850e-47 |
Msa0176330 | Msa1305350 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
Msa0176330 | Msa1306750 | 0.813268 | 2.789606e-51 | -8.615850e-47 |
Msa0176330 | Msa1307550 | 0.809460 | 1.871429e-50 | -8.615850e-47 |
Msa0176330 | Msa1307740 | 0.810477 | 1.130309e-50 | -8.615850e-47 |
Msa0176330 | Msa1314770 | 0.839565 | 1.468301e-57 | -8.615850e-47 |
Msa0176330 | Msa1317270 | 0.802713 | 4.923028e-49 | -8.615850e-47 |
Msa0176330 | Msa1331280 | 0.801288 | 9.664200e-49 | -8.615850e-47 |
Msa0176330 | Msa1331350 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
Msa0176330 | Msa1332050 | 0.807804 | 4.226450e-50 | -8.615850e-47 |
Msa0176330 | Msa1335230 | 0.804983 | 1.662075e-49 | -8.615850e-47 |
Msa0176330 | Msa1335710 | 0.841053 | 6.000215e-58 | -8.615850e-47 |
Msa0176330 | Msa1336040 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
Msa0176330 | Msa1339190 | 0.831907 | 1.279326e-55 | -8.615850e-47 |
Msa0176330 | Msa1340830 | 0.818452 | 1.946074e-52 | -8.615850e-47 |
Msa0176330 | Msa1341490 | 0.809673 | 1.684243e-50 | -8.615850e-47 |
Msa0176330 | Msa1348600 | 0.814192 | 1.745762e-51 | -8.615850e-47 |
Msa0176330 | Msa1350690 | 0.818489 | 1.908579e-52 | -8.615850e-47 |
Msa0176330 | Msa1355890 | 0.812158 | 4.880112e-51 | -8.615850e-47 |
Msa0176330 | Msa1363700 | 0.819220 | 1.302079e-52 | -8.615850e-47 |
Msa0176330 | Msa1365860 | 0.803949 | 2.730470e-49 | -8.615850e-47 |
Msa0176330 | Msa1371090 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
Msa0176330 | Msa1371240 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
Msa0176330 | Msa1371940 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
Msa0176330 | Msa1372290 | 0.818733 | 1.680562e-52 | -8.615850e-47 |
Msa0176330 | Msa1382790 | 0.809103 | 2.232642e-50 | -8.615850e-47 |
Msa0176330 | Msa1396940 | 0.814722 | 1.333182e-51 | -8.615850e-47 |
Msa0176330 | Msa1416260 | 0.801355 | 9.364853e-49 | -8.615850e-47 |
Msa0176330 | Msa1417810 | -0.812825 | 3.489481e-51 | -8.615850e-47 |
Msa0176330 | Msa1422840 | 0.818885 | 1.552008e-52 | -8.615850e-47 |
Msa0176330 | Msa1426570 | 0.810576 | 1.075975e-50 | -8.615850e-47 |
Msa0176330 | Msa1428780 | 0.813355 | 2.669312e-51 | -8.615850e-47 |
Msa0176330 | Msa1433220 | 0.809503 | 1.832015e-50 | -8.615850e-47 |
Msa0176330 | Msa1435400 | 0.804091 | 2.550611e-49 | -8.615850e-47 |
Msa0176330 | Msa1444260 | 0.824577 | 7.487697e-54 | -8.615850e-47 |
Msa0176330 | Msa1445400 | -0.813571 | 2.392391e-51 | -8.615850e-47 |
Msa0176330 | Msa1448630 | 0.832386 | 9.735093e-56 | -8.615850e-47 |
Msa0176330 | Msa1449350 | -0.820418 | 6.932566e-53 | -8.615850e-47 |
Msa0176330 | Msa1450870 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
Msa0176330 | Msa1458030 | 0.810294 | 1.237971e-50 | -8.615850e-47 |
Msa0176330 | Msa1463600 | 0.828890 | 6.991624e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176330 | MtrunA17_Chr1g0198811 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 626 |
Msa0176330 | MtrunA17_Chr2g0313071 | 30.000 | 200 | 121 | 5 | 11 | 205 | 8 | 193 | 5.27e-21 | 91.7 |
Msa0176330 | MtrunA17_Chr8g0336491 | 30.000 | 200 | 121 | 5 | 11 | 205 | 8 | 193 | 1.46e-20 | 90.1 |
Msa0176330 | MtrunA17_Chr6g0480801 | 70.370 | 54 | 11 | 1 | 32 | 85 | 44 | 92 | 3.02e-20 | 84.7 |
Msa0176330 | MtrunA17_Chr1g0186371 | 29.000 | 200 | 121 | 6 | 11 | 205 | 8 | 191 | 1.69e-17 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176330 | AT1G25682.1 | 72.669 | 311 | 82 | 2 | 1 | 311 | 1 | 308 | 3.21e-169 | 472 |
Msa0176330 | AT1G25682.2 | 72.669 | 311 | 82 | 2 | 1 | 311 | 1 | 308 | 3.21e-169 | 472 |
Msa0176330 | AT1G25988.1 | 74.359 | 78 | 20 | 0 | 103 | 180 | 27 | 104 | 1.17e-35 | 127 |
Msa0176330 | AT1G17130.1 | 28.502 | 207 | 129 | 5 | 11 | 212 | 8 | 200 | 6.83e-19 | 85.9 |
Msa0176330 | AT1G17130.2 | 27.570 | 214 | 129 | 5 | 11 | 212 | 8 | 207 | 4.96e-18 | 83.6 |
Msa0176330 | AT3G43250.1 | 33.945 | 109 | 58 | 3 | 11 | 117 | 8 | 104 | 1.97e-13 | 69.3 |
Find 99 sgRNAs with CRISPR-Local
Find 663 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTCAGTCACCTTTGATTT+TGG | 0.217659 | 1_4:+62673482 | Msa0176330:three_prime_UTR |
ATCAGGGTATCTTGATTATA+AGG | 0.255625 | 1_4:+62666801 | Msa0176330:CDS |
GACGGGCAATCCAGGGAATA+TGG | 0.258001 | 1_4:-62673267 | None:intergenic |
GGCGTAGATTCTGTCTTTGC+TGG | 0.260603 | 1_4:+62673825 | Msa0176330:three_prime_UTR |
ATCACATACTCACAGTTCTT+TGG | 0.264942 | 1_4:-62672465 | None:intergenic |
GAGAAACAAAATCGTTATTA+AGG | 0.288238 | 1_4:-62665101 | None:intergenic |
CTTCCATCACACATTATATA+TGG | 0.293729 | 1_4:-62673622 | None:intergenic |
TGGTGTTCAAGGCGGTAAAA+TGG | 0.310275 | 1_4:-62672866 | None:intergenic |
ACCTGGCTTGGATCCCATTC+TGG | 0.311079 | 1_4:-62666639 | None:intergenic |
TTGAGATGCCTTATAATATA+TGG | 0.313340 | 1_4:+62667275 | Msa0176330:CDS |
CCTCCGCACCATATATTATA+AGG | 0.317386 | 1_4:-62667283 | None:intergenic |
TTTCTAGTGTCTTGCATTCA+TGG | 0.318374 | 1_4:-62673438 | None:intergenic |
TCTACAGCATGCTGCTTTCA+TGG | 0.328345 | 1_4:-62672418 | None:intergenic |
GAAATGAATTATGAAGATTT+CGG | 0.329426 | 1_4:-62673753 | None:intergenic |
ACCTTACATCAAAATCAAAA+TGG | 0.347608 | 1_4:+62665218 | Msa0176330:exon |
GAGAGCAAGGAAGTTAGATC+AGG | 0.349867 | 1_4:+62666784 | Msa0176330:CDS |
AAGCGCAGCATCTAGCCTTT+TGG | 0.353767 | 1_4:+62673349 | Msa0176330:CDS |
ATCGTTATTAAGGAGTTTCC+TGG | 0.355150 | 1_4:-62665091 | None:intergenic |
TACATAGAAATTGCTTGATA+AGG | 0.361493 | 1_4:+62673523 | Msa0176330:three_prime_UTR |
AATTCTTAGTTATTCATTTG+TGG | 0.370030 | 1_4:+62673672 | Msa0176330:three_prime_UTR |
GGCATAGTCGTCCGAATGTC+TGG | 0.372030 | 1_4:-62672957 | None:intergenic |
CAAGTAACATACTCTAAGTT+TGG | 0.373219 | 1_4:-62672999 | None:intergenic |
TTTCGGGAGCTTAATATAGA+TGG | 0.406177 | 1_4:+62673564 | Msa0176330:three_prime_UTR |
GCATCTAGGAAAAGGGGCCT+TGG | 0.407781 | 1_4:+62673131 | Msa0176330:CDS |
ATGGATGAGACGGGCAATCC+AGG | 0.417753 | 1_4:-62673275 | None:intergenic |
AATCTTCCTCATGGTGTTCA+AGG | 0.420033 | 1_4:-62672877 | None:intergenic |
ATTCTTAGTTATTCATTTGT+GGG | 0.421608 | 1_4:+62673673 | Msa0176330:three_prime_UTR |
GTAATAGTATCATCTGATTC+CGG | 0.422881 | 1_4:+62673804 | Msa0176330:three_prime_UTR |
GGTTCTCTGAACAAGTTTCA+TGG | 0.426891 | 1_4:+62666743 | Msa0176330:CDS |
GCTTCTTCTCTGCATTGAAC+CGG | 0.428388 | 1_4:-62667333 | None:intergenic |
AATGTCTGATGCCAGACATT+CGG | 0.444983 | 1_4:+62672946 | Msa0176330:CDS |
GTTCTTTGGATCAGTTTGAA+TGG | 0.451321 | 1_4:-62672451 | None:intergenic |
CATCTAGGAAAAGGGGCCTT+GGG | 0.455684 | 1_4:+62673132 | Msa0176330:CDS |
AGATTTCGGTGATAAAGAAC+CGG | 0.457500 | 1_4:-62673739 | None:intergenic |
TGTTCTGTCAAGCAGGCAAA+AGG | 0.461856 | 1_4:+62673409 | Msa0176330:CDS |
CGCTGGAGACGCACAAGCAC+TGG | 0.464581 | 1_4:-62672923 | None:intergenic |
AAGAAGCTGCATCTAGGAAA+AGG | 0.464590 | 1_4:+62673123 | Msa0176330:CDS |
ACAATCCAGCTACATGAAAA+CGG | 0.469567 | 1_4:-62673714 | None:intergenic |
AGAAGCTGCATCTAGGAAAA+GGG | 0.469824 | 1_4:+62673124 | Msa0176330:CDS |
CTATGATTGCAAAGGGTGTC+CGG | 0.472676 | 1_4:+62667314 | Msa0176330:CDS |
ATGCAGAGAAGAAGCAAGTT+GGG | 0.475460 | 1_4:+62667341 | Msa0176330:CDS |
GCGTAGATTCTGTCTTTGCT+GGG | 0.477964 | 1_4:+62673826 | Msa0176330:three_prime_UTR |
GTCTGGCATCAGACATTCGC+TGG | 0.492170 | 1_4:-62672940 | None:intergenic |
CAATCCAGCTACATGAAAAC+GGG | 0.493128 | 1_4:-62673713 | None:intergenic |
ACGGGCAATCCAGGGAATAT+GGG | 0.497967 | 1_4:-62673266 | None:intergenic |
TCATGTAGCTGGATTGTGCC+CGG | 0.501061 | 1_4:+62673720 | Msa0176330:three_prime_UTR |
GCAGCATCTTGTTCTGAAGC+TGG | 0.501516 | 1_4:-62673167 | None:intergenic |
GAAAGCAGCATGCTGTAGAC+AGG | 0.507368 | 1_4:+62672422 | Msa0176330:CDS |
AATGCTGCTCCCATATTCCC+TGG | 0.508968 | 1_4:+62673257 | Msa0176330:CDS |
GTACGCAAATATACCTGGCT+TGG | 0.510300 | 1_4:-62666651 | None:intergenic |
CTGAAGAAGAAGCTGCATCT+AGG | 0.513065 | 1_4:+62673117 | Msa0176330:CDS |
TCCAGAATGGGATCCAAGCC+AGG | 0.514395 | 1_4:+62666638 | Msa0176330:CDS |
CAGCCTTCTCTTACCAGACA+TGG | 0.522667 | 1_4:-62673294 | None:intergenic |
GTTTATACCCTCCAGCCAAA+AGG | 0.523272 | 1_4:-62673364 | None:intergenic |
TTGCCCGTCTCATCCATGTC+TGG | 0.524578 | 1_4:+62673281 | Msa0176330:CDS |
GAGGGTATAAACCGTCATCT+TGG | 0.526453 | 1_4:+62673375 | Msa0176330:CDS |
TGCAATTCTATGATTGCAAA+GGG | 0.527726 | 1_4:+62667307 | Msa0176330:CDS |
TTCGAGTTACCTGCTGATGA+AGG | 0.528478 | 1_4:+62672543 | Msa0176330:CDS |
AGAATTCAACTTTGTCGAAG+TGG | 0.530862 | 1_4:-62673655 | None:intergenic |
AATGCAGAGAAGAAGCAAGT+TGG | 0.531409 | 1_4:+62667340 | Msa0176330:CDS |
TAAACCGTCATCTTGGTCAC+AGG | 0.534179 | 1_4:+62673382 | Msa0176330:CDS |
AGGGAGCTGTTCTGTCAAGC+AGG | 0.536545 | 1_4:+62673402 | Msa0176330:CDS |
CTTCCTTGCTCTCTCTCTCA+AGG | 0.536908 | 1_4:-62666774 | None:intergenic |
TTCATTTGTGGGTTAGACAC+CGG | 0.542042 | 1_4:+62673684 | Msa0176330:three_prime_UTR |
TCATGCACACCTTCATCAGC+AGG | 0.543966 | 1_4:-62672552 | None:intergenic |
AAATTTGTGTTACAGAGAGA+GGG | 0.546667 | 1_4:+62672831 | Msa0176330:intron |
AGTAAATAAGCCAAAATCAA+AGG | 0.549933 | 1_4:-62673492 | None:intergenic |
AACATACTCTAAGTTTGGCC+CGG | 0.552541 | 1_4:-62672994 | None:intergenic |
CATGTCTGGTAAGAGAAGGC+TGG | 0.552595 | 1_4:+62673295 | Msa0176330:CDS |
TATTAAGGAGTTTCCTGGGT+CGG | 0.555346 | 1_4:-62665086 | None:intergenic |
TCGTTATTAAGGAGTTTCCT+GGG | 0.558388 | 1_4:-62665090 | None:intergenic |
TGGATGAGACGGGCAATCCA+GGG | 0.561142 | 1_4:-62673274 | None:intergenic |
GAACTTCACTTTCGCTGCTG+CGG | 0.562222 | 1_4:-62673189 | None:intergenic |
GTTCTGTCAAGCAGGCAAAA+GGG | 0.575210 | 1_4:+62673410 | Msa0176330:CDS |
ATGCCTTGAGAGAGAGAGCA+AGG | 0.581873 | 1_4:+62666771 | Msa0176330:CDS |
ATGCAATTCTATGATTGCAA+AGG | 0.583657 | 1_4:+62667306 | Msa0176330:CDS |
ATCTGCTCTAGCAGCTGCAA+GGG | 0.592187 | 1_4:-62666601 | None:intergenic |
TATCTGCTCTAGCAGCTGCA+AGG | 0.592633 | 1_4:-62666602 | None:intergenic |
CTTACCAGACATGGATGAGA+CGG | 0.598118 | 1_4:-62673285 | None:intergenic |
CATCCATGTCTGGTAAGAGA+AGG | 0.598795 | 1_4:+62673291 | Msa0176330:CDS |
TAATCAAAATATTCCGACCC+AGG | 0.610298 | 1_4:+62665073 | Msa0176330:five_prime_UTR |
TTACCAGACATGGATGAGAC+GGG | 0.611020 | 1_4:-62673284 | None:intergenic |
AGAGCAAGGAAGTTAGATCA+GGG | 0.613858 | 1_4:+62666785 | Msa0176330:CDS |
GAAGCTGCATCTAGGAAAAG+GGG | 0.615335 | 1_4:+62673125 | Msa0176330:CDS |
GATTTCGGTGATAAAGAACC+GGG | 0.615687 | 1_4:-62673738 | None:intergenic |
AAGCCATATATAATGTGTGA+TGG | 0.616717 | 1_4:+62673619 | Msa0176330:three_prime_UTR |
GTGAGTATGTGATCATCAGT+GGG | 0.620162 | 1_4:+62672475 | Msa0176330:CDS |
CCTTATAATATATGGTGCGG+AGG | 0.625854 | 1_4:+62667283 | Msa0176330:CDS |
GCTCCCTGTGACCAAGATGA+CGG | 0.632091 | 1_4:-62673386 | None:intergenic |
ATGCCTTATAATATATGGTG+CGG | 0.650909 | 1_4:+62667280 | Msa0176330:CDS |
CTGGAAGCAGTCGAATCCCA+AGG | 0.652032 | 1_4:-62673148 | None:intergenic |
AAACCGTCATCTTGGTCACA+GGG | 0.655559 | 1_4:+62673383 | Msa0176330:CDS |
TGTGAGTATGTGATCATCAG+TGG | 0.657354 | 1_4:+62672474 | Msa0176330:CDS |
TGGCTTGGATCCCATTCTGG+AGG | 0.660594 | 1_4:-62666636 | None:intergenic |
AGCAAAGACAGAATCTACGC+CGG | 0.670071 | 1_4:-62673823 | None:intergenic |
CTTCCTCATGGTGTTCAAGG+CGG | 0.674565 | 1_4:-62672874 | None:intergenic |
TTACCGCCTTGAACACCATG+AGG | 0.701615 | 1_4:+62672871 | Msa0176330:CDS |
TGGGAATTACTACTCTACGA+AGG | 0.715974 | 1_4:+62667360 | Msa0176330:CDS |
TGAGTATGTGATCATCAGTG+GGG | 0.814262 | 1_4:+62672476 | Msa0176330:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAATAAAAAATAAAAAC+GGG | - | chr1_4:62665258-62665277 | None:intergenic | 10.0% |
!! | CGAAAAATAAAAAATAAAAA+CGG | - | chr1_4:62665259-62665278 | None:intergenic | 10.0% |
!!! | TTTTTCATTTTTTTAAACAA+AGG | + | chr1_4:62667441-62667460 | Msa0176330:intron | 10.0% |
!!! | TTTTAAATTCATTTTTCCTA+TGG | - | chr1_4:62665462-62665481 | None:intergenic | 15.0% |
!! | TTGTTAAACAAAAAAATAAC+AGG | - | chr1_4:62666108-62666127 | None:intergenic | 15.0% |
!! | AAACAAAAACAACAAAAATA+AGG | - | chr1_4:62666285-62666304 | None:intergenic | 15.0% |
!!! | TTTTTGTTTTTATGAAATAG+CGG | + | chr1_4:62666296-62666315 | Msa0176330:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr1_4:62666493-62666512 | None:intergenic | 15.0% |
!! | ATTAGATAATATGGAATAAA+AGG | - | chr1_4:62667239-62667258 | None:intergenic | 15.0% |
!!! | TATTTCGTTTTGTTTTATTT+TGG | + | chr1_4:62667851-62667870 | Msa0176330:intron | 15.0% |
!!! | TTTTTATAACAAATTTGGAA+TGG | + | chr1_4:62671423-62671442 | Msa0176330:intron | 15.0% |
!! | CAAAATAAGAATAAACAAAA+AGG | - | chr1_4:62671700-62671719 | None:intergenic | 15.0% |
!!! | CTTTTTGTTTATTCTTATTT+TGG | + | chr1_4:62671698-62671717 | Msa0176330:intron | 15.0% |
!!! | TATTTCGTTTTGTTTTATTT+TGG | + | chr1_4:62667851-62667870 | Msa0176330:intron | 15.0% |
!!! | TATATGTACATATATTGATT+TGG | + | chr1_4:62672605-62672624 | Msa0176330:intron | 15.0% |
!!! | ATTTTATAAGTTATACGACA+TGG | + | chr1_4:62665503-62665522 | Msa0176330:intron | 20.0% |
!!! | TATCTTTTAAAACCATGTAT+CGG | - | chr1_4:62665606-62665625 | None:intergenic | 20.0% |
!!! | TAGATTATTTTGCTTGATTA+TGG | + | chr1_4:62665624-62665643 | Msa0176330:intron | 20.0% |
!!! | AGATTATTTTGCTTGATTAT+GGG | + | chr1_4:62665625-62665644 | Msa0176330:intron | 20.0% |
!! | TTTCTCTTAAAATGAAATAG+CGG | - | chr1_4:62665959-62665978 | None:intergenic | 20.0% |
!!! | AAGTGTTTAATTTCTATTGT+CGG | + | chr1_4:62666443-62666462 | Msa0176330:intron | 20.0% |
!!! | ATCATAATGGATCATTAAAT+TGG | - | chr1_4:62667060-62667079 | None:intergenic | 20.0% |
!! | ACACTTGAAAATAATATGTA+AGG | - | chr1_4:62667671-62667690 | None:intergenic | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | chr1_4:62667819-62667838 | None:intergenic | 20.0% |
!! | TAGAAACAATCAAATTATTG+AGG | + | chr1_4:62668333-62668352 | Msa0176330:intron | 20.0% |
!! | CAAGAAAAATCTAAACATAA+TGG | + | chr1_4:62669297-62669316 | Msa0176330:intron | 20.0% |
!! | GTTCTTGATTTAATGAAAAT+TGG | + | chr1_4:62670722-62670741 | Msa0176330:intron | 20.0% |
!!! | GGAGTTTTTTATAACAAATT+TGG | + | chr1_4:62671418-62671437 | Msa0176330:intron | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | chr1_4:62667819-62667838 | None:intergenic | 20.0% |
!! | ACACTTGAAAATAATATGTA+AGG | - | chr1_4:62667671-62667690 | None:intergenic | 20.0% |
!!! | AAAGCATTAAACTTGTTAAA+GGG | - | chr1_4:62672733-62672752 | None:intergenic | 20.0% |
!!! | AAAAGCATTAAACTTGTTAA+AGG | - | chr1_4:62672734-62672753 | None:intergenic | 20.0% |
!! | AGATTTGAAAAAAAAGAAAC+AGG | + | chr1_4:62672895-62672914 | Msa0176330:CDS | 20.0% |
!!! | TCTTTATAATGCAGTTTTTT+CGG | + | chr1_4:62673547-62673566 | Msa0176330:three_prime_UTR | 20.0% |
!! | AATTCTTAGTTATTCATTTG+TGG | + | chr1_4:62673672-62673691 | Msa0176330:three_prime_UTR | 20.0% |
!! | ATTCTTAGTTATTCATTTGT+GGG | + | chr1_4:62673673-62673692 | Msa0176330:three_prime_UTR | 20.0% |
!! | GAAATGAATTATGAAGATTT+CGG | - | chr1_4:62673756-62673775 | None:intergenic | 20.0% |
! | GAGAAACAAAATCGTTATTA+AGG | - | chr1_4:62665104-62665123 | None:intergenic | 25.0% |
! | ACCTTACATCAAAATCAAAA+TGG | + | chr1_4:62665218-62665237 | Msa0176330:exon | 25.0% |
!!! | ACCATTTTGATTTTGATGTA+AGG | - | chr1_4:62665222-62665241 | None:intergenic | 25.0% |
! | TATGTTGCATCAAATTTATC+AGG | + | chr1_4:62665280-62665299 | Msa0176330:intron | 25.0% |
! | CATCAAATTTATCAGGATTA+GGG | + | chr1_4:62665287-62665306 | Msa0176330:intron | 25.0% |
! | ATATTACAGTATTTCACCAT+AGG | + | chr1_4:62665443-62665462 | Msa0176330:intron | 25.0% |
! | TTACAACAACAAAGAATTCA+TGG | + | chr1_4:62665544-62665563 | Msa0176330:intron | 25.0% |
!!! | ATCTTTTAAAACCATGTATC+GGG | - | chr1_4:62665605-62665624 | None:intergenic | 25.0% |
!!! | GATTATTTTGCTTGATTATG+GGG | + | chr1_4:62665626-62665645 | Msa0176330:intron | 25.0% |
! | AGAAAATACAAAATTGTCCT+TGG | + | chr1_4:62665974-62665993 | Msa0176330:intron | 25.0% |
!!! | CTTGTTTTCTTTTTAAACCA+AGG | - | chr1_4:62665994-62666013 | None:intergenic | 25.0% |
! | CTTGGTTTAAAAAGAAAACA+AGG | + | chr1_4:62665992-62666011 | Msa0176330:intron | 25.0% |
! | AACTAGAACAAAAAAGTAAC+AGG | - | chr1_4:62666148-62666167 | None:intergenic | 25.0% |
!! | GTTTTATATGAACAAAACAG+AGG | - | chr1_4:62666241-62666260 | None:intergenic | 25.0% |
! | ACATGTAATATGAGTACTTA+TGG | + | chr1_4:62666408-62666427 | Msa0176330:intron | 25.0% |
!! | TAACTTGTATGTATTTGATG+TGG | + | chr1_4:62666518-62666537 | Msa0176330:intron | 25.0% |
! | CAAATGCAAGTTAAGTTTAT+TGG | - | chr1_4:62666563-62666582 | None:intergenic | 25.0% |
!!! | TATGAAGACAAATGGATTAA+TGG | - | chr1_4:62666869-62666888 | None:intergenic | 25.0% |
! | TAATGAGTTATGAAGACAAA+TGG | - | chr1_4:62666877-62666896 | None:intergenic | 25.0% |
! | TACAGAGAATAAAGGATTTA+CGG | - | chr1_4:62666918-62666937 | None:intergenic | 25.0% |
! | TAGCATATTACAGAGAATAA+AGG | - | chr1_4:62666926-62666945 | None:intergenic | 25.0% |
! | ATATGCTAAATGAAACAATG+TGG | + | chr1_4:62666938-62666957 | Msa0176330:intron | 25.0% |
! | TAAAATAAAATAGCCCAGAT+TGG | - | chr1_4:62667213-62667232 | None:intergenic | 25.0% |
! | AGAATGGTCATTAGATAATA+TGG | - | chr1_4:62667248-62667267 | None:intergenic | 25.0% |
! | TTGAGATGCCTTATAATATA+TGG | + | chr1_4:62667275-62667294 | Msa0176330:CDS | 25.0% |
!! | GAAGCATCTAATGTTTATTA+TGG | + | chr1_4:62667401-62667420 | Msa0176330:intron | 25.0% |
!!! | TCATTTTTTTAAACAAAGGC+AGG | + | chr1_4:62667445-62667464 | Msa0176330:intron | 25.0% |
! | AAGTTGAAAAAAGTTTGTCA+TGG | - | chr1_4:62667575-62667594 | None:intergenic | 25.0% |
! | AATCACTATTAGACTATAAC+TGG | - | chr1_4:62667638-62667657 | None:intergenic | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr1_4:62668047-62668066 | Msa0176330:intron | 25.0% |
!! | AGAATTCGACATTTTACATA+CGG | + | chr1_4:62668183-62668202 | Msa0176330:intron | 25.0% |
! | TTCAATAGATTTAGCTGAAT+TGG | - | chr1_4:62668446-62668465 | None:intergenic | 25.0% |
! | TTCAGCTAAATCTATTGAAA+AGG | + | chr1_4:62668447-62668466 | Msa0176330:intron | 25.0% |
! | AAAAGAAGATGAATTTGTGA+GGG | - | chr1_4:62668740-62668759 | None:intergenic | 25.0% |
! | AAAAAGAAGATGAATTTGTG+AGG | - | chr1_4:62668741-62668760 | None:intergenic | 25.0% |
! | ATTTGTTTGTTCAATAGTGT+GGG | - | chr1_4:62668868-62668887 | None:intergenic | 25.0% |
!! | AATTTGTTTGTTCAATAGTG+TGG | - | chr1_4:62668869-62668888 | None:intergenic | 25.0% |
!! | TGAAAGATGATTTTGTAGAA+TGG | - | chr1_4:62670097-62670116 | None:intergenic | 25.0% |
! | CAAAATCATCTTTCATTAAG+TGG | + | chr1_4:62670102-62670121 | Msa0176330:intron | 25.0% |
!! | GAGTTTGTTTATGATCAAAA+TGG | + | chr1_4:62670218-62670237 | Msa0176330:intron | 25.0% |
!!! | TGATTTTTTAATCCAGGTTT+TGG | - | chr1_4:62670246-62670265 | None:intergenic | 25.0% |
!!! | CAAGTTTGATTTTTTAATCC+AGG | - | chr1_4:62670252-62670271 | None:intergenic | 25.0% |
! | CTGGATTAAAAAATCAAACT+TGG | + | chr1_4:62670250-62670269 | Msa0176330:intron | 25.0% |
! | ATGTGAAGAATTATGTTTCA+AGG | + | chr1_4:62670273-62670292 | Msa0176330:intron | 25.0% |
! | ATTTAATGAAAATTGGTCAG+AGG | + | chr1_4:62670729-62670748 | Msa0176330:intron | 25.0% |
! | TAACAAATATAACACTCCTT+TGG | - | chr1_4:62670932-62670951 | None:intergenic | 25.0% |
!! | GATTATCACATATCTGTTTT+TGG | + | chr1_4:62671445-62671464 | Msa0176330:intron | 25.0% |
! | TCAAGATTTAAATCACAATG+AGG | + | chr1_4:62671579-62671598 | Msa0176330:intron | 25.0% |
!! | AATTTCACAAAAGCTATTTC+TGG | + | chr1_4:62671656-62671675 | Msa0176330:intron | 25.0% |
! | TCTTTATCAAAATGAGAACT+CGG | + | chr1_4:62671879-62671898 | Msa0176330:intron | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr1_4:62668047-62668066 | Msa0176330:intron | 25.0% |
! | TAATCATTAACGTGTTTATC+TGG | + | chr1_4:62672372-62672391 | Msa0176330:intron | 25.0% |
!!! | TTTTTTTCAAATCTTCCTCA+TGG | - | chr1_4:62672889-62672908 | None:intergenic | 25.0% |
!!! | CTTTTGACTCTAAGAAAATA+GGG | - | chr1_4:62673087-62673106 | None:intergenic | 25.0% |
!!! | TCTTTTGACTCTAAGAAAAT+AGG | - | chr1_4:62673088-62673107 | None:intergenic | 25.0% |
! | CTAGTAAGTTTGACAAAAAT+AGG | + | chr1_4:62673213-62673232 | Msa0176330:CDS | 25.0% |
! | TAAGTTTGACAAAAATAGGA+AGG | + | chr1_4:62673217-62673236 | Msa0176330:CDS | 25.0% |
! | AGTAAATAAGCCAAAATCAA+AGG | - | chr1_4:62673495-62673514 | None:intergenic | 25.0% |
! | TACATAGAAATTGCTTGATA+AGG | + | chr1_4:62673523-62673542 | Msa0176330:three_prime_UTR | 25.0% |
!!! | CTTTATAATGCAGTTTTTTC+GGG | + | chr1_4:62673548-62673567 | Msa0176330:three_prime_UTR | 25.0% |
!!! | GTCGGAATATTTTGATTATC+TGG | - | chr1_4:62665071-62665090 | None:intergenic | 30.0% |
!! | TCTGATTGAGAAAGTTTTGT+TGG | - | chr1_4:62665141-62665160 | None:intergenic | 30.0% |
GCATCAAATTTATCAGGATT+AGG | + | chr1_4:62665286-62665305 | Msa0176330:intron | 30.0% | |
ATTTATCAGGATTAGGGTTA+AGG | + | chr1_4:62665293-62665312 | Msa0176330:intron | 30.0% | |
!! | TGGATGTTTTATGTTGATTG+TGG | + | chr1_4:62665326-62665345 | Msa0176330:intron | 30.0% |
!! | ATGTTTTATGTTGATTGTGG+AGG | + | chr1_4:62665329-62665348 | Msa0176330:intron | 30.0% |
TTAAAACTGATACGCAAGTA+TGG | + | chr1_4:62665476-62665495 | Msa0176330:intron | 30.0% | |
TAAAACTGATACGCAAGTAT+GGG | + | chr1_4:62665477-62665496 | Msa0176330:intron | 30.0% | |
!!! | TCTTTTAAAACCATGTATCG+GGG | - | chr1_4:62665604-62665623 | None:intergenic | 30.0% |
!! | AAGAGTGTTGAAGAATTTGA+CGG | + | chr1_4:62665662-62665681 | Msa0176330:intron | 30.0% |
! | TAGATTTTAAATGCCTGTGT+GGG | + | chr1_4:62665725-62665744 | Msa0176330:intron | 30.0% |
! | TATCCCACTATAGCATTTTT+GGG | + | chr1_4:62666335-62666354 | Msa0176330:intron | 30.0% |
ACATGCATAGTAGTTAATAG+CGG | - | chr1_4:62666383-62666402 | None:intergenic | 30.0% | |
ATGAGTACTTATGGATATCT+TGG | + | chr1_4:62666417-62666436 | Msa0176330:intron | 30.0% | |
! | ATCAGGGTATCTTGATTATA+AGG | + | chr1_4:62666801-62666820 | Msa0176330:CDS | 30.0% |
AACTCATTTCTGACTATTCT+AGG | - | chr1_4:62666981-62667000 | None:intergenic | 30.0% | |
AATGATCCATTATGATCGAA+AGG | + | chr1_4:62667064-62667083 | Msa0176330:intron | 30.0% | |
ATGATCCATTATGATCGAAA+GGG | + | chr1_4:62667065-62667084 | Msa0176330:intron | 30.0% | |
TATCTAATGACCATTCTTTC+AGG | + | chr1_4:62667251-62667270 | Msa0176330:intron | 30.0% | |
ATGCCTTATAATATATGGTG+CGG | + | chr1_4:62667280-62667299 | Msa0176330:CDS | 30.0% | |
ATGCAATTCTATGATTGCAA+AGG | + | chr1_4:62667306-62667325 | Msa0176330:CDS | 30.0% | |
TGCAATTCTATGATTGCAAA+GGG | + | chr1_4:62667307-62667326 | Msa0176330:CDS | 30.0% | |
! | GCAAGATTTTAAACTGTCAT+TGG | - | chr1_4:62667537-62667556 | None:intergenic | 30.0% |
CATCACTATGAGACTATAAT+TGG | - | chr1_4:62667754-62667773 | None:intergenic | 30.0% | |
TTATAGTCTCATAGTGATGT+AGG | + | chr1_4:62667755-62667774 | Msa0176330:intron | 30.0% | |
!!! | TTTTGTTTTATTTTGGCCCA+CGG | + | chr1_4:62667858-62667877 | Msa0176330:intron | 30.0% |
GCATAAGTTCTGCTTATATA+GGG | - | chr1_4:62667899-62667918 | None:intergenic | 30.0% | |
TGCATAAGTTCTGCTTATAT+AGG | - | chr1_4:62667900-62667919 | None:intergenic | 30.0% | |
! | TAGAGATTTTCTCTCAATTC+TGG | + | chr1_4:62667955-62667974 | Msa0176330:intron | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | chr1_4:62667993-62668012 | None:intergenic | 30.0% | |
!! | TGAGGATTCGAATTTTTCAA+AGG | + | chr1_4:62668351-62668370 | Msa0176330:intron | 30.0% |
!! | AAAGGATCAGAAAGCATTAA+AGG | + | chr1_4:62668465-62668484 | Msa0176330:intron | 30.0% |
!! | TCTTTGTGTTTTTCAACTTG+TGG | - | chr1_4:62668571-62668590 | None:intergenic | 30.0% |
GAAAAACACAAAGAAGTTCA+AGG | + | chr1_4:62668577-62668596 | Msa0176330:intron | 30.0% | |
AATCTCCCATTTGTAAATCA+CGG | + | chr1_4:62668620-62668639 | Msa0176330:intron | 30.0% | |
ATGATCCGTGATTTACAAAT+GGG | - | chr1_4:62668628-62668647 | None:intergenic | 30.0% | |
TATGATCCGTGATTTACAAA+TGG | - | chr1_4:62668629-62668648 | None:intergenic | 30.0% | |
! | AGCGATGAAATTAGTTCTTT+GGG | - | chr1_4:62668685-62668704 | None:intergenic | 30.0% |
! | AAGCGATGAAATTAGTTCTT+TGG | - | chr1_4:62668686-62668705 | None:intergenic | 30.0% |
! | GATTTAGAACATGGATTCAA+AGG | - | chr1_4:62668712-62668731 | None:intergenic | 30.0% |
TCCAATTTCAGAAATCAACA+TGG | + | chr1_4:62668831-62668850 | Msa0176330:intron | 30.0% | |
!! | TCCATGTTGATTTCTGAAAT+TGG | - | chr1_4:62668835-62668854 | None:intergenic | 30.0% |
!! | ATGTTGCTGTTTGAAACAAA+TGG | - | chr1_4:62669249-62669268 | None:intergenic | 30.0% |
!! | GTAGAATTATCTTTTTGAGG+CGG | - | chr1_4:62669543-62669562 | None:intergenic | 30.0% |
! | TGCGTAGAATTATCTTTTTG+AGG | - | chr1_4:62669546-62669565 | None:intergenic | 30.0% |
AGTATGTCGATGAAAATGAA+AGG | + | chr1_4:62669591-62669610 | Msa0176330:intron | 30.0% | |
GTATGTCGATGAAAATGAAA+GGG | + | chr1_4:62669592-62669611 | Msa0176330:intron | 30.0% | |
CCATTCCATAATATGAGTTT+CGG | - | chr1_4:62669805-62669824 | None:intergenic | 30.0% | |
CGAAACTCATATTATGGAAT+GGG | + | chr1_4:62669803-62669822 | Msa0176330:intron | 30.0% | |
GAAACTCATATTATGGAATG+GGG | + | chr1_4:62669804-62669823 | Msa0176330:intron | 30.0% | |
!!! | TGTTAGTTTTACAACAGTGA+TGG | + | chr1_4:62669926-62669945 | Msa0176330:intron | 30.0% |
AACAAGATACACAAAGCAAT+CGG | - | chr1_4:62670033-62670052 | None:intergenic | 30.0% | |
! | TTGAAAAGGAATTTTCATCC+TGG | - | chr1_4:62670136-62670155 | None:intergenic | 30.0% |
CATGAAGCTCAAATTTGAAA+AGG | - | chr1_4:62670150-62670169 | None:intergenic | 30.0% | |
GATATTGGCGATAAAATCAT+GGG | - | chr1_4:62670192-62670211 | None:intergenic | 30.0% | |
TATAATCAATCAACTGCCAT+TGG | + | chr1_4:62670367-62670386 | Msa0176330:intron | 30.0% | |
AGAACATTGCAAAATTCCAA+TGG | - | chr1_4:62670386-62670405 | None:intergenic | 30.0% | |
! | ATTTTGCAATGTTCTTCAAG+AGG | + | chr1_4:62670391-62670410 | Msa0176330:intron | 30.0% |
! | TTTTGCAATGTTCTTCAAGA+GGG | + | chr1_4:62670392-62670411 | Msa0176330:intron | 30.0% |
!! | TAATTTTGACGATTTGACAG+CGG | + | chr1_4:62670571-62670590 | Msa0176330:intron | 30.0% |
GAATGGTTTAAATGTACATG+AGG | + | chr1_4:62670667-62670686 | Msa0176330:intron | 30.0% | |
GCATCTAATTCAATTCTGAA+TGG | + | chr1_4:62670839-62670858 | Msa0176330:intron | 30.0% | |
AGGTTTAAACTTGAAGTGAT+GGG | + | chr1_4:62670992-62671011 | Msa0176330:intron | 30.0% | |
TGAAAAACATAGACACTTGT+GGG | - | chr1_4:62671073-62671092 | None:intergenic | 30.0% | |
ATGAAAAACATAGACACTTG+TGG | - | chr1_4:62671074-62671093 | None:intergenic | 30.0% | |
! | TGTTTTTCATGAATGTTCCT+TGG | + | chr1_4:62671084-62671103 | Msa0176330:intron | 30.0% |
! | GTTTTTCATGAATGTTCCTT+GGG | + | chr1_4:62671085-62671104 | Msa0176330:intron | 30.0% |
AATCAAAGCAATATACCAAC+TGG | + | chr1_4:62671180-62671199 | Msa0176330:intron | 30.0% | |
!!! | TAAAGACACTAGTCTTTTAG+AGG | + | chr1_4:62671213-62671232 | Msa0176330:intron | 30.0% |
ATTTAAATCTTGAACAGCTC+GGG | - | chr1_4:62671572-62671591 | None:intergenic | 30.0% | |
GATTTAAATCTTGAACAGCT+CGG | - | chr1_4:62671573-62671592 | None:intergenic | 30.0% | |
TGATTATGTTTATACCAGCT+AGG | + | chr1_4:62671782-62671801 | Msa0176330:intron | 30.0% | |
CTTTATCAAAATGAGAACTC+GGG | + | chr1_4:62671880-62671899 | Msa0176330:intron | 30.0% | |
TTTATCAAAATGAGAACTCG+GGG | + | chr1_4:62671881-62671900 | Msa0176330:intron | 30.0% | |
!!! | TTTTGTTTTATTTTGGCCCA+CGG | + | chr1_4:62667858-62667877 | Msa0176330:intron | 30.0% |
GCATAAGTTCTGCTTATATA+GGG | - | chr1_4:62667899-62667918 | None:intergenic | 30.0% | |
TGCATAAGTTCTGCTTATAT+AGG | - | chr1_4:62667900-62667919 | None:intergenic | 30.0% | |
! | TAGAGATTTTCTCTCAATTC+TGG | + | chr1_4:62667955-62667974 | Msa0176330:intron | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | chr1_4:62667993-62668012 | None:intergenic | 30.0% | |
TTAATGCACTGCATTATCTT+GGG | + | chr1_4:62672311-62672330 | Msa0176330:intron | 30.0% | |
TTGAACAGCACTATTTAGAT+TGG | - | chr1_4:62672338-62672357 | None:intergenic | 30.0% | |
AAAATTTGTGTTACAGAGAG+AGG | + | chr1_4:62672830-62672849 | Msa0176330:intron | 30.0% | |
AAATTTGTGTTACAGAGAGA+GGG | + | chr1_4:62672831-62672850 | Msa0176330:intron | 30.0% | |
ATGCCCTAAATAAAAATCTC+CGG | + | chr1_4:62672975-62672994 | Msa0176330:CDS | 30.0% | |
CAAGTAACATACTCTAAGTT+TGG | - | chr1_4:62673002-62673021 | None:intergenic | 30.0% | |
TCTAAGAAAATAGGGAAAAG+GGG | - | chr1_4:62673079-62673098 | None:intergenic | 30.0% | |
! | CTCTAAGAAAATAGGGAAAA+GGG | - | chr1_4:62673080-62673099 | None:intergenic | 30.0% |
! | ACTCTAAGAAAATAGGGAAA+AGG | - | chr1_4:62673081-62673100 | None:intergenic | 30.0% |
AAGCCATATATAATGTGTGA+TGG | + | chr1_4:62673619-62673638 | Msa0176330:three_prime_UTR | 30.0% | |
CTTCCATCACACATTATATA+TGG | - | chr1_4:62673625-62673644 | None:intergenic | 30.0% | |
GTAATAGTATCATCTGATTC+CGG | + | chr1_4:62673804-62673823 | Msa0176330:three_prime_UTR | 30.0% | |
TAATCAAAATATTCCGACCC+AGG | + | chr1_4:62665073-62665092 | Msa0176330:five_prime_UTR | 35.0% | |
TCGTTATTAAGGAGTTTCCT+GGG | - | chr1_4:62665093-62665112 | None:intergenic | 35.0% | |
ATCGTTATTAAGGAGTTTCC+TGG | - | chr1_4:62665094-62665113 | None:intergenic | 35.0% | |
AGGGTTAAGGATCAAATTGA+TGG | + | chr1_4:62665306-62665325 | Msa0176330:intron | 35.0% | |
AAAACTGATACGCAAGTATG+GGG | + | chr1_4:62665478-62665497 | Msa0176330:intron | 35.0% | |
! | AGAGCTTTTATGAGTTGTGA+TGG | - | chr1_4:62665570-62665589 | None:intergenic | 35.0% |
! | GTAGATTTTAAATGCCTGTG+TGG | + | chr1_4:62665724-62665743 | Msa0176330:intron | 35.0% |
! | AGATTTTAAATGCCTGTGTG+GGG | + | chr1_4:62665726-62665745 | Msa0176330:intron | 35.0% |
GTTTGCATAGTAGTCAATAG+CGG | + | chr1_4:62665801-62665820 | Msa0176330:intron | 35.0% | |
TAGAGGAAGATTTACAGTAG+AGG | - | chr1_4:62666062-62666081 | None:intergenic | 35.0% | |
! | CTATCCCACTATAGCATTTT+TGG | + | chr1_4:62666334-62666353 | Msa0176330:intron | 35.0% |
! | ATCCCACTATAGCATTTTTG+GGG | + | chr1_4:62666336-62666355 | Msa0176330:intron | 35.0% |
!! | TAGTAGTTAATAGCGGATAG+CGG | - | chr1_4:62666376-62666395 | None:intergenic | 35.0% |
! | ACTTTTACTTTCCTCCAGAA+TGG | + | chr1_4:62666625-62666644 | Msa0176330:CDS | 35.0% |
! | CTTTTACTTTCCTCCAGAAT+GGG | + | chr1_4:62666626-62666645 | Msa0176330:CDS | 35.0% |
TTGTTGTACGCAAATATACC+TGG | - | chr1_4:62666659-62666678 | None:intergenic | 35.0% | |
ACACTATATTTCCTCCTTTC+AGG | + | chr1_4:62666721-62666740 | Msa0176330:intron | 35.0% | |
CACTATATTTCCTCCTTTCA+GGG | + | chr1_4:62666722-62666741 | Msa0176330:intron | 35.0% | |
GAGAATAAAGGATTTACGGT+AGG | - | chr1_4:62666914-62666933 | None:intergenic | 35.0% | |
ACTATCCCTTTCGATCATAA+TGG | - | chr1_4:62667073-62667092 | None:intergenic | 35.0% | |
AGGGATAGTCTACTTTATGT+AGG | + | chr1_4:62667084-62667103 | Msa0176330:intron | 35.0% | |
GGGATAGTCTACTTTATGTA+GGG | + | chr1_4:62667085-62667104 | Msa0176330:intron | 35.0% | |
GGATAGTCTACTTTATGTAG+GGG | + | chr1_4:62667086-62667105 | Msa0176330:intron | 35.0% | |
AAAATAGCCCAGATTGGAAA+AGG | - | chr1_4:62667207-62667226 | None:intergenic | 35.0% | |
!!! | TTTGTTTTATTTTGGCCCAC+GGG | + | chr1_4:62667859-62667878 | Msa0176330:intron | 35.0% |
GAAAGAAATAACAAACCCGT+GGG | - | chr1_4:62667877-62667896 | None:intergenic | 35.0% | |
! | AGATTTTCTCTCAATTCTGG+TGG | + | chr1_4:62667958-62667977 | Msa0176330:intron | 35.0% |
ACCTATCAAAATAAGGGTTC+CGG | - | chr1_4:62667987-62668006 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | chr1_4:62667994-62668013 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | chr1_4:62668023-62668042 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | chr1_4:62668024-62668043 | None:intergenic | 35.0% | |
GATCACGTTAGAAAAAGAAC+AGG | - | chr1_4:62668133-62668152 | None:intergenic | 35.0% | |
CATCTGATTTAACAGTGCTT+TGG | - | chr1_4:62668212-62668231 | None:intergenic | 35.0% | |
!! | CAAAGCACTGTTAAATCAGA+TGG | + | chr1_4:62668210-62668229 | Msa0176330:intron | 35.0% |
!! | TGTTTTTGTCGTTGTAGTTG+CGG | - | chr1_4:62668276-62668295 | None:intergenic | 35.0% |
ACGACAAAAACAATCAGAAC+AGG | + | chr1_4:62668284-62668303 | Msa0176330:intron | 35.0% | |
!! | GGATTCGAATTTTTCAAAGG+TGG | + | chr1_4:62668354-62668373 | Msa0176330:intron | 35.0% |
AAGAGATAATGTCGAATCAC+TGG | + | chr1_4:62668392-62668411 | Msa0176330:intron | 35.0% | |
ATTAAAGGCTAAACTTGACG+AGG | + | chr1_4:62668480-62668499 | Msa0176330:intron | 35.0% | |
! | TGGTTTGTGATTATGGATGT+TGG | - | chr1_4:62668655-62668674 | None:intergenic | 35.0% |
AACATCCATAATCACAAACC+AGG | + | chr1_4:62668654-62668673 | Msa0176330:intron | 35.0% | |
! | GCGATGAAATTAGTTCTTTG+GGG | - | chr1_4:62668684-62668703 | None:intergenic | 35.0% |
TGAAATTGGATATGCATCGA+TGG | - | chr1_4:62668821-62668840 | None:intergenic | 35.0% | |
TATGACGAGAATGCTTTAGT+TGG | - | chr1_4:62668892-62668911 | None:intergenic | 35.0% | |
ATCAGGTGATTAGATGAGAA+TGG | - | chr1_4:62669114-62669133 | None:intergenic | 35.0% | |
TATTTGATCTTGCTTTGCAG+CGG | - | chr1_4:62669190-62669209 | None:intergenic | 35.0% | |
AATGGAAACTTTCCTGTTGT+TGG | - | chr1_4:62669231-62669250 | None:intergenic | 35.0% | |
TTTCAAGCCTTTAGCAGATT+CGG | + | chr1_4:62669350-62669369 | Msa0176330:intron | 35.0% | |
CAGAACCTTGATAAAAAGAG+GGG | - | chr1_4:62669377-62669396 | None:intergenic | 35.0% | |
CCAGAACCTTGATAAAAAGA+GGG | - | chr1_4:62669378-62669397 | None:intergenic | 35.0% | |
ACCAGAACCTTGATAAAAAG+AGG | - | chr1_4:62669379-62669398 | None:intergenic | 35.0% | |
TGAAGCTTCAATACCATGAA+GGG | - | chr1_4:62669436-62669455 | None:intergenic | 35.0% | |
TTCAGTTCAATCTCAAAGAG+TGG | + | chr1_4:62669452-62669471 | Msa0176330:intron | 35.0% | |
AACTTCCTTCCTTGAACATT+CGG | + | chr1_4:62669629-62669648 | Msa0176330:intron | 35.0% | |
TAAACCATTTGCATCTTCTC+TGG | - | chr1_4:62669720-62669739 | None:intergenic | 35.0% | |
ATTTGTGACCGATACATAAG+CGG | - | chr1_4:62669775-62669794 | None:intergenic | 35.0% | |
CCGAAACTCATATTATGGAA+TGG | + | chr1_4:62669802-62669821 | Msa0176330:intron | 35.0% | |
ACAAGATACACAAAGCAATC+GGG | - | chr1_4:62670032-62670051 | None:intergenic | 35.0% | |
GCTTTGTGTATCTTGTTGAA+CGG | + | chr1_4:62670036-62670055 | Msa0176330:intron | 35.0% | |
AGCTTCATGTCTGATGAATT+AGG | + | chr1_4:62670161-62670180 | Msa0176330:intron | 35.0% | |
GGATATTGGCGATAAAATCA+TGG | - | chr1_4:62670193-62670212 | None:intergenic | 35.0% | |
AACAAACTCACAGAGGATAT+TGG | - | chr1_4:62670207-62670226 | None:intergenic | 35.0% | |
GATCATAAACAAACTCACAG+AGG | - | chr1_4:62670214-62670233 | None:intergenic | 35.0% | |
ATCAAAATGGTACCAAAACC+TGG | + | chr1_4:62670231-62670250 | Msa0176330:intron | 35.0% | |
! | TTCATCTCAGTTCTAGTAGT+GGG | + | chr1_4:62670303-62670322 | Msa0176330:intron | 35.0% |
ACAACTACTTCGCAATTTGT+TGG | + | chr1_4:62670334-62670353 | Msa0176330:intron | 35.0% | |
! | CAACTACTTCGCAATTTGTT+GGG | + | chr1_4:62670335-62670354 | Msa0176330:intron | 35.0% |
!! | AACTACTTCGCAATTTGTTG+GGG | + | chr1_4:62670336-62670355 | Msa0176330:intron | 35.0% |
CAAGAGGGAAAGAAACAATT+AGG | + | chr1_4:62670407-62670426 | Msa0176330:intron | 35.0% | |
ACAATTAGGTGAGTGTACAA+TGG | + | chr1_4:62670421-62670440 | Msa0176330:intron | 35.0% | |
CGAAACAACTCTCAATTGAA+TGG | + | chr1_4:62670650-62670669 | Msa0176330:intron | 35.0% | |
AAATGTACATGAGGCATGTT+TGG | + | chr1_4:62670676-62670695 | Msa0176330:intron | 35.0% | |
ACATCTTGAGTACAACTAAC+CGG | - | chr1_4:62670704-62670723 | None:intergenic | 35.0% | |
GAGGTTTAAACTTGAAGTGA+TGG | + | chr1_4:62670991-62671010 | Msa0176330:intron | 35.0% | |
AAGATGAGCATGAATATGAC+AGG | + | chr1_4:62671017-62671036 | Msa0176330:intron | 35.0% | |
AGATGAGCATGAATATGACA+GGG | + | chr1_4:62671018-62671037 | Msa0176330:intron | 35.0% | |
GAGGATGCAGAATTAATAGA+AGG | + | chr1_4:62671040-62671059 | Msa0176330:intron | 35.0% | |
GATGCAGAATTAATAGAAGG+AGG | + | chr1_4:62671043-62671062 | Msa0176330:intron | 35.0% | |
CTTTACTATTCACAACCAGT+TGG | - | chr1_4:62671198-62671217 | None:intergenic | 35.0% | |
CTAGCGCATAACAAGTTATT+TGG | - | chr1_4:62671244-62671263 | None:intergenic | 35.0% | |
! | ACAGAGTTATTTCCAAGAGT+TGG | + | chr1_4:62671294-62671313 | Msa0176330:intron | 35.0% |
! | GCTGGTTTCATTCAAAAGAA+CGG | + | chr1_4:62671316-62671335 | Msa0176330:intron | 35.0% |
! | GTATTCTCTGAGAGTGAAAA+TGG | + | chr1_4:62671394-62671413 | Msa0176330:intron | 35.0% |
!!! | TGTTTTTGGAAGCATTGTGA+AGG | + | chr1_4:62671459-62671478 | Msa0176330:intron | 35.0% |
CATTCATACTGCTGTTGAAA+TGG | + | chr1_4:62671498-62671517 | Msa0176330:intron | 35.0% | |
AGGTTCAAACAGTCATACTT+TGG | - | chr1_4:62671616-62671635 | None:intergenic | 35.0% | |
TTTGAACCTTAGCAACGTTA+AGG | + | chr1_4:62671627-62671646 | Msa0176330:intron | 35.0% | |
!! | CACAAAAGCTATTTCTGGAA+TGG | + | chr1_4:62671661-62671680 | Msa0176330:intron | 35.0% |
!! | CTATTTCTGGAATGGAACTT+GGG | + | chr1_4:62671669-62671688 | Msa0176330:intron | 35.0% |
TCACTGTTTACTTTGAGCAA+TGG | + | chr1_4:62671743-62671762 | Msa0176330:intron | 35.0% | |
CACTGTTTACTTTGAGCAAT+GGG | + | chr1_4:62671744-62671763 | Msa0176330:intron | 35.0% | |
AAACATAATCACATGACCTC+CGG | - | chr1_4:62671773-62671792 | None:intergenic | 35.0% | |
!!! | TTTGTTTTATTTTGGCCCAC+GGG | + | chr1_4:62667859-62667878 | Msa0176330:intron | 35.0% |
GAAAGAAATAACAAACCCGT+GGG | - | chr1_4:62667877-62667896 | None:intergenic | 35.0% | |
! | AGATTTTCTCTCAATTCTGG+TGG | + | chr1_4:62667958-62667977 | Msa0176330:intron | 35.0% |
ACCTATCAAAATAAGGGTTC+CGG | - | chr1_4:62667987-62668006 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | chr1_4:62667994-62668013 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | chr1_4:62668023-62668042 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | chr1_4:62668024-62668043 | None:intergenic | 35.0% | |
GTTAATGCACTGCATTATCT+TGG | + | chr1_4:62672310-62672329 | Msa0176330:intron | 35.0% | |
GTTCTTTGGATCAGTTTGAA+TGG | - | chr1_4:62672454-62672473 | None:intergenic | 35.0% | |
ATCACATACTCACAGTTCTT+TGG | - | chr1_4:62672468-62672487 | None:intergenic | 35.0% | |
!! | AACTGAGGATTTTGATGTTG+AGG | + | chr1_4:62672509-62672528 | Msa0176330:CDS | 35.0% |
ATGCGATTGCATCTTTCAAT+TGG | + | chr1_4:62672655-62672674 | Msa0176330:intron | 35.0% | |
AAGTTTGCCTTTGAACCTTT+GGG | + | chr1_4:62672679-62672698 | Msa0176330:intron | 35.0% | |
AATCCATAGAAAACAGCTGT+TGG | - | chr1_4:62672706-62672725 | None:intergenic | 35.0% | |
! | TAGTAACTGATTCACTATCG+TGG | + | chr1_4:62672783-62672802 | Msa0176330:intron | 35.0% |
TGCCCTAAATAAAAATCTCC+GGG | + | chr1_4:62672976-62672995 | Msa0176330:CDS | 35.0% | |
CTAAGAAAATAGGGAAAAGG+GGG | - | chr1_4:62673078-62673097 | None:intergenic | 35.0% | |
ACAAAAATAGGAAGGACAAG+CGG | + | chr1_4:62673225-62673244 | Msa0176330:CDS | 35.0% | |
! | TTTCTAGTGTCTTGCATTCA+TGG | - | chr1_4:62673441-62673460 | None:intergenic | 35.0% |
!! | TTGTCAGTCACCTTTGATTT+TGG | + | chr1_4:62673482-62673501 | Msa0176330:three_prime_UTR | 35.0% |
TTTCGGGAGCTTAATATAGA+TGG | + | chr1_4:62673564-62673583 | Msa0176330:three_prime_UTR | 35.0% | |
AGAATTCAACTTTGTCGAAG+TGG | - | chr1_4:62673658-62673677 | None:intergenic | 35.0% | |
ACAATCCAGCTACATGAAAA+CGG | - | chr1_4:62673717-62673736 | None:intergenic | 35.0% | |
AGATTTCGGTGATAAAGAAC+CGG | - | chr1_4:62673742-62673761 | None:intergenic | 35.0% | |
TATTAAGGAGTTTCCTGGGT+CGG | - | chr1_4:62665089-62665108 | None:intergenic | 40.0% | |
ATTCGTGGGATGTGTAATTC+AGG | + | chr1_4:62665364-62665383 | Msa0176330:intron | 40.0% | |
GGTAGTAATACACACACTCA+CGG | + | chr1_4:62665683-62665702 | Msa0176330:intron | 40.0% | |
GGAGTAGGGAATGCAAATTA+TGG | + | chr1_4:62665751-62665770 | Msa0176330:intron | 40.0% | |
! | GAAGTTTTACAGAACAGCAG+AGG | - | chr1_4:62666035-62666054 | None:intergenic | 40.0% |
TAGCAAACACGACAAAGTAG+AGG | - | chr1_4:62666079-62666098 | None:intergenic | 40.0% | |
GACCCCAAAAATGCTATAGT+GGG | - | chr1_4:62666341-62666360 | None:intergenic | 40.0% | |
!!! | CACTATAGCATTTTTGGGGT+CGG | + | chr1_4:62666340-62666359 | Msa0176330:intron | 40.0% |
CCACATAGAGACAAAGATCA+GGG | - | chr1_4:62666470-62666489 | None:intergenic | 40.0% | |
GGTTCTCTGAACAAGTTTCA+TGG | + | chr1_4:62666743-62666762 | Msa0176330:CDS | 40.0% | |
AGAGCAAGGAAGTTAGATCA+GGG | + | chr1_4:62666785-62666804 | Msa0176330:CDS | 40.0% | |
CTACTTACTGGCGTGTTATA+TGG | + | chr1_4:62667111-62667130 | Msa0176330:intron | 40.0% | |
GCATCTCAAACCTGAAAGAA+TGG | - | chr1_4:62667264-62667283 | None:intergenic | 40.0% | |
CCTCCGCACCATATATTATA+AGG | - | chr1_4:62667286-62667305 | None:intergenic | 40.0% | |
CCTTATAATATATGGTGCGG+AGG | + | chr1_4:62667283-62667302 | Msa0176330:CDS | 40.0% | |
AATGCAGAGAAGAAGCAAGT+TGG | + | chr1_4:62667340-62667359 | Msa0176330:CDS | 40.0% | |
ATGCAGAGAAGAAGCAAGTT+GGG | + | chr1_4:62667341-62667360 | Msa0176330:CDS | 40.0% | |
TGGGAATTACTACTCTACGA+AGG | + | chr1_4:62667360-62667379 | Msa0176330:CDS | 40.0% | |
! | ACAAGTTTGTTCACATGAGC+AGG | - | chr1_4:62667481-62667500 | None:intergenic | 40.0% |
TAGTCTCATAGTGATGTAGG+AGG | + | chr1_4:62667758-62667777 | Msa0176330:intron | 40.0% | |
AGTCTCATAGTGATGTAGGA+GGG | + | chr1_4:62667759-62667778 | Msa0176330:intron | 40.0% | |
GGAAAGAAATAACAAACCCG+TGG | - | chr1_4:62667878-62667897 | None:intergenic | 40.0% | |
! | GAATCAAAAGTGTGCCTCTT+AGG | - | chr1_4:62667924-62667943 | None:intergenic | 40.0% |
!!! | TCCGGAACCCTTATTTTGAT+AGG | + | chr1_4:62667983-62668002 | Msa0176330:intron | 40.0% |
! | TTTTCTAACGTGATCAGCCA+TGG | + | chr1_4:62668138-62668157 | Msa0176330:intron | 40.0% |
TTTCTAACGTGATCAGCCAT+GGG | + | chr1_4:62668139-62668158 | Msa0176330:intron | 40.0% | |
CTGATTTAACAGTGCTTTGG+CGG | - | chr1_4:62668209-62668228 | None:intergenic | 40.0% | |
AGCACTGTTAAATCAGATGG+TGG | + | chr1_4:62668213-62668232 | Msa0176330:intron | 40.0% | |
GTGGCATTAACAGCTAAGAT+CGG | + | chr1_4:62668232-62668251 | Msa0176330:intron | 40.0% | |
AACAATCAGAACAGGAGATG+TGG | + | chr1_4:62668292-62668311 | Msa0176330:intron | 40.0% | |
TTTCTACCACGAACCCTAAT+TGG | - | chr1_4:62668319-62668338 | None:intergenic | 40.0% | |
AACCAGAAGGTGATAATCTC+TGG | + | chr1_4:62668512-62668531 | Msa0176330:intron | 40.0% | |
! | GTTCTCCTGGTTTGTGATTA+TGG | - | chr1_4:62668662-62668681 | None:intergenic | 40.0% |
! | AGGGAAGGTGATTTAGAACA+TGG | - | chr1_4:62668721-62668740 | None:intergenic | 40.0% |
GAAGATGAATTTGTGAGGGA+AGG | - | chr1_4:62668736-62668755 | None:intergenic | 40.0% | |
ACAAAACATCAGAGGGTTGA+AGG | - | chr1_4:62668764-62668783 | None:intergenic | 40.0% | |
TGTCGTCACAAAACATCAGA+GGG | - | chr1_4:62668771-62668790 | None:intergenic | 40.0% | |
TTGTCGTCACAAAACATCAG+AGG | - | chr1_4:62668772-62668791 | None:intergenic | 40.0% | |
TTGTGTTATGTGAGAGGGAT+TGG | - | chr1_4:62668945-62668964 | None:intergenic | 40.0% | |
TCCCTCTCACATAACACAAT+CGG | + | chr1_4:62668946-62668965 | Msa0176330:intron | 40.0% | |
! | CTTAAGCATTGCAGATTGGA+GGG | - | chr1_4:62669075-62669094 | None:intergenic | 40.0% |
! | ACTTAAGCATTGCAGATTGG+AGG | - | chr1_4:62669076-62669095 | None:intergenic | 40.0% |
! | CTCACTTAAGCATTGCAGAT+TGG | - | chr1_4:62669079-62669098 | None:intergenic | 40.0% |
CAATCTGCAATGCTTAAGTG+AGG | + | chr1_4:62669077-62669096 | Msa0176330:intron | 40.0% | |
TCACTCAAACCAATGACATC+AGG | - | chr1_4:62669156-62669175 | None:intergenic | 40.0% | |
CTTTCCTGTTGTTGGAGATT+GGG | - | chr1_4:62669223-62669242 | None:intergenic | 40.0% | |
ACTTTCCTGTTGTTGGAGAT+TGG | - | chr1_4:62669224-62669243 | None:intergenic | 40.0% | |
TTCAAGCCTTTAGCAGATTC+GGG | + | chr1_4:62669351-62669370 | Msa0176330:intron | 40.0% | |
! | CCCTCTTTTTATCAAGGTTC+TGG | + | chr1_4:62669375-62669394 | Msa0176330:intron | 40.0% |
! | GATTGCTGAGAAAGTGTAGT+TGG | - | chr1_4:62669414-62669433 | None:intergenic | 40.0% |
CTGAAGCTTCAATACCATGA+AGG | - | chr1_4:62669437-62669456 | None:intergenic | 40.0% | |
TCAATCTCAAAGAGTGGATG+CGG | + | chr1_4:62669458-62669477 | Msa0176330:intron | 40.0% | |
!! | CAAAAGTACCCTCCATCTTA+AGG | + | chr1_4:62669500-62669519 | Msa0176330:intron | 40.0% |
AACAACTGTAGAGCTAGGAT+CGG | - | chr1_4:62669658-62669677 | None:intergenic | 40.0% | |
! | TTTGCATCTTCTCTGGCTTA+CGG | - | chr1_4:62669713-62669732 | None:intergenic | 40.0% |
TAAGCCAGAGAAGATGCAAA+TGG | + | chr1_4:62669713-62669732 | Msa0176330:intron | 40.0% | |
CATAATATGAGTTTCGGCCA+TGG | - | chr1_4:62669799-62669818 | None:intergenic | 40.0% | |
CATGGCCGAAACTCATATTA+TGG | + | chr1_4:62669797-62669816 | Msa0176330:intron | 40.0% | |
TCGAAAACATGAATGGAGGA+CGG | - | chr1_4:62669873-62669892 | None:intergenic | 40.0% | |
TGTTGTGCAGAAAAAGATGC+GGG | - | chr1_4:62669902-62669921 | None:intergenic | 40.0% | |
CTGTTGTGCAGAAAAAGATG+CGG | - | chr1_4:62669903-62669922 | None:intergenic | 40.0% | |
AGTATATGACGCTGCAATCT+TGG | - | chr1_4:62669970-62669989 | None:intergenic | 40.0% | |
AAGATTGCAGCGTCATATAC+TGG | + | chr1_4:62669969-62669988 | Msa0176330:intron | 40.0% | |
CATATACTGGCAGCATGAAT+TGG | + | chr1_4:62669982-62670001 | Msa0176330:intron | 40.0% | |
TGGCAGCATGAATTGGATAA+AGG | + | chr1_4:62669989-62670008 | Msa0176330:intron | 40.0% | |
CATTAAGTGGCTTATTTGCC+AGG | + | chr1_4:62670115-62670134 | Msa0176330:intron | 40.0% | |
! | CTTCATCTCAGTTCTAGTAG+TGG | + | chr1_4:62670302-62670321 | Msa0176330:intron | 40.0% |
! | AGATACTGATATGGCGGTTT+TGG | - | chr1_4:62670521-62670540 | None:intergenic | 40.0% |
CGATTTGACAGCGGTTAATT+TGG | + | chr1_4:62670580-62670599 | Msa0176330:intron | 40.0% | |
GATGATTCACTAGTCAGTGA+TGG | + | chr1_4:62670605-62670624 | Msa0176330:intron | 40.0% | |
CTGTCTCTATCTTGTGGATT+TGG | + | chr1_4:62670862-62670881 | Msa0176330:intron | 40.0% | |
GCAGAATTAATAGAAGGAGG+TGG | + | chr1_4:62671046-62671065 | Msa0176330:intron | 40.0% | |
TCATGAATGTTCCTTGGGTA+TGG | + | chr1_4:62671090-62671109 | Msa0176330:intron | 40.0% | |
TTGTGTACTATCCATACCCA+AGG | - | chr1_4:62671104-62671123 | None:intergenic | 40.0% | |
TCATGAACAAAGTTCTCCTC+AGG | - | chr1_4:62671145-62671164 | None:intergenic | 40.0% | |
GGAGAACTTTGTTCATGAGA+TGG | + | chr1_4:62671147-62671166 | Msa0176330:intron | 40.0% | |
GCGCATAACAAGTTATTTGG+AGG | - | chr1_4:62671241-62671260 | None:intergenic | 40.0% | |
! | CAGAATTTTTGCGCTCAAGT+TGG | + | chr1_4:62671266-62671285 | Msa0176330:intron | 40.0% |
! | AGTTATTTCCAAGAGTTGGC+TGG | + | chr1_4:62671298-62671317 | Msa0176330:intron | 40.0% |
AACATCCGTTAAAGTTCCAC+TGG | + | chr1_4:62671351-62671370 | Msa0176330:intron | 40.0% | |
TGCATCCAGTGGAACTTTAA+CGG | - | chr1_4:62671359-62671378 | None:intergenic | 40.0% | |
! | TTCTCTGAGAGTGAAAATGG+TGG | + | chr1_4:62671397-62671416 | Msa0176330:intron | 40.0% |
GTATGAATGATATGCAGAGG+AGG | - | chr1_4:62671487-62671506 | None:intergenic | 40.0% | |
GCAGTATGAATGATATGCAG+AGG | - | chr1_4:62671490-62671509 | None:intergenic | 40.0% | |
GAAAGTCCTTAACGTTGCTA+AGG | - | chr1_4:62671636-62671655 | None:intergenic | 40.0% | |
!! | GCTATTTCTGGAATGGAACT+TGG | + | chr1_4:62671668-62671687 | Msa0176330:intron | 40.0% |
AACATAATCACATGACCTCC+GGG | - | chr1_4:62671772-62671791 | None:intergenic | 40.0% | |
GAGGATGATCTCTTGTTCAT+TGG | + | chr1_4:62671833-62671852 | Msa0176330:intron | 40.0% | |
GATGATCTCTTGTTCATTGG+AGG | + | chr1_4:62671836-62671855 | Msa0176330:intron | 40.0% | |
GGAAAGAAATAACAAACCCG+TGG | - | chr1_4:62667878-62667897 | None:intergenic | 40.0% | |
! | GAATCAAAAGTGTGCCTCTT+AGG | - | chr1_4:62667924-62667943 | None:intergenic | 40.0% |
!!! | TCCGGAACCCTTATTTTGAT+AGG | + | chr1_4:62667983-62668002 | Msa0176330:intron | 40.0% |
AATCACTATGTGACGCAGTA+CGG | - | chr1_4:62672259-62672278 | None:intergenic | 40.0% | |
TATCTGGATACGTGCAGATA+TGG | + | chr1_4:62672388-62672407 | Msa0176330:intron | 40.0% | |
TGTGAGTATGTGATCATCAG+TGG | + | chr1_4:62672474-62672493 | Msa0176330:CDS | 40.0% | |
GTGAGTATGTGATCATCAGT+GGG | + | chr1_4:62672475-62672494 | Msa0176330:CDS | 40.0% | |
TGAGTATGTGATCATCAGTG+GGG | + | chr1_4:62672476-62672495 | Msa0176330:CDS | 40.0% | |
ATCGCATGTCTCAAACTACT+GGG | - | chr1_4:62672642-62672661 | None:intergenic | 40.0% | |
AATCGCATGTCTCAAACTAC+TGG | - | chr1_4:62672643-62672662 | None:intergenic | 40.0% | |
CAAGTTTGCCTTTGAACCTT+TGG | + | chr1_4:62672678-62672697 | Msa0176330:intron | 40.0% | |
TTAAGCACAGTTGCAATGCT+AGG | - | chr1_4:62672760-62672779 | None:intergenic | 40.0% | |
AATCTTCCTCATGGTGTTCA+AGG | - | chr1_4:62672880-62672899 | None:intergenic | 40.0% | |
AATGTCTGATGCCAGACATT+CGG | + | chr1_4:62672946-62672965 | Msa0176330:CDS | 40.0% | |
!! | GGCCCGGAGATTTTTATTTA+GGG | - | chr1_4:62672981-62673000 | None:intergenic | 40.0% |
!! | TGGCCCGGAGATTTTTATTT+AGG | - | chr1_4:62672982-62673001 | None:intergenic | 40.0% |
AACATACTCTAAGTTTGGCC+CGG | - | chr1_4:62672997-62673016 | None:intergenic | 40.0% | |
AAGAAGCTGCATCTAGGAAA+AGG | + | chr1_4:62673123-62673142 | Msa0176330:CDS | 40.0% | |
AGAAGCTGCATCTAGGAAAA+GGG | + | chr1_4:62673124-62673143 | Msa0176330:CDS | 40.0% | |
CAAAAATAGGAAGGACAAGC+GGG | + | chr1_4:62673226-62673245 | Msa0176330:CDS | 40.0% | |
!! | TTCATTTGTGGGTTAGACAC+CGG | + | chr1_4:62673684-62673703 | Msa0176330:three_prime_UTR | 40.0% |
! | ACATGAAAACGGGACTTTTC+CGG | - | chr1_4:62673706-62673725 | None:intergenic | 40.0% |
CAATCCAGCTACATGAAAAC+GGG | - | chr1_4:62673716-62673735 | None:intergenic | 40.0% | |
GATTTCGGTGATAAAGAACC+GGG | - | chr1_4:62673741-62673760 | None:intergenic | 40.0% | |
! | ATGTTGATTGTGGAGGAGCT+TGG | + | chr1_4:62665336-62665355 | Msa0176330:intron | 45.0% |
AGGAGCTTGGAGTAAATTCG+TGG | + | chr1_4:62665349-62665368 | Msa0176330:intron | 45.0% | |
GGAGCTTGGAGTAAATTCGT+GGG | + | chr1_4:62665350-62665369 | Msa0176330:intron | 45.0% | |
TTGCTTGATTATGGGGTGAG+TGG | + | chr1_4:62665633-62665652 | Msa0176330:intron | 45.0% | |
! | TTTTAAATGCCTGTGTGGGG+AGG | + | chr1_4:62665729-62665748 | Msa0176330:intron | 45.0% |
TTTAAATGCCTGTGTGGGGA+GGG | + | chr1_4:62665730-62665749 | Msa0176330:intron | 45.0% | |
AGAGAGAGCAGAATGGAGTT+TGG | - | chr1_4:62666190-62666209 | None:intergenic | 45.0% | |
CAGAAACAGAGAGAGCAGAA+TGG | - | chr1_4:62666197-62666216 | None:intergenic | 45.0% | |
CGACCCCAAAAATGCTATAG+TGG | - | chr1_4:62666342-62666361 | None:intergenic | 45.0% | |
CCCTGATCTTTGTCTCTATG+TGG | + | chr1_4:62666467-62666486 | Msa0176330:intron | 45.0% | |
GCCACATAGAGACAAAGATC+AGG | - | chr1_4:62666471-62666490 | None:intergenic | 45.0% | |
GTACGCAAATATACCTGGCT+TGG | - | chr1_4:62666654-62666673 | None:intergenic | 45.0% | |
CTTGTTCAGAGAACCCTGAA+AGG | - | chr1_4:62666738-62666757 | None:intergenic | 45.0% | |
GAGAGCAAGGAAGTTAGATC+AGG | + | chr1_4:62666784-62666803 | Msa0176330:CDS | 45.0% | |
!! | TATGTAGGGGTGCTACTTAC+TGG | + | chr1_4:62667099-62667118 | Msa0176330:intron | 45.0% |
ATAGCCCAGATTGGAAAAGG+AGG | - | chr1_4:62667204-62667223 | None:intergenic | 45.0% | |
!! | CTATGATTGCAAAGGGTGTC+CGG | + | chr1_4:62667314-62667333 | Msa0176330:CDS | 45.0% |
GCTTCTTCTCTGCATTGAAC+CGG | - | chr1_4:62667336-62667355 | None:intergenic | 45.0% | |
CAGAACTTATGCAGCCTAAG+AGG | + | chr1_4:62667907-62667926 | Msa0176330:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | chr1_4:62667965-62667984 | Msa0176330:intron | 45.0% |
ACAGGAGATGTGGACCAATT+AGG | + | chr1_4:62668302-62668321 | Msa0176330:intron | 45.0% | |
CAGGAGATGTGGACCAATTA+GGG | + | chr1_4:62668303-62668322 | Msa0176330:intron | 45.0% | |
GAGGATGAAGTCAAACCAGA+AGG | + | chr1_4:62668499-62668518 | Msa0176330:intron | 45.0% | |
TGCCAGAGATTATCACCTTC+TGG | - | chr1_4:62668517-62668536 | None:intergenic | 45.0% | |
GGTGATAATCTCTGGCAACA+CGG | + | chr1_4:62668520-62668539 | Msa0176330:intron | 45.0% | |
!! | GGAGATTGACTTGACTCTCT+AGG | - | chr1_4:62668607-62668626 | None:intergenic | 45.0% |
!! | TTAGTTCTTTGGGGTTCTCC+TGG | - | chr1_4:62668675-62668694 | None:intergenic | 45.0% |
TCATACGATCTGCAACGCTT+TGG | + | chr1_4:62668907-62668926 | Msa0176330:intron | 45.0% | |
GCCGATTGTGTTATGTGAGA+GGG | - | chr1_4:62668950-62668969 | None:intergenic | 45.0% | |
CTCTCACATAACACAATCGG+CGG | + | chr1_4:62668949-62668968 | Msa0176330:intron | 45.0% | |
CCAATGACATCAGGTGGTTT+CGG | - | chr1_4:62669147-62669166 | None:intergenic | 45.0% | |
CTCAAACCAATGACATCAGG+TGG | - | chr1_4:62669153-62669172 | None:intergenic | 45.0% | |
CTTTCTCAGCAATCCCTTCA+TGG | + | chr1_4:62669420-62669439 | Msa0176330:intron | 45.0% | |
!! | GATCCTAGCTCTACAGTTGT+TGG | + | chr1_4:62669657-62669676 | Msa0176330:intron | 45.0% |
TCACCAACAACTGTAGAGCT+AGG | - | chr1_4:62669663-62669682 | None:intergenic | 45.0% | |
! | ATCTTCTCTGGCTTACGGAT+GGG | - | chr1_4:62669708-62669727 | None:intergenic | 45.0% |
! | TGTATCGGTCACAAATGCCA+TGG | + | chr1_4:62669779-62669798 | Msa0176330:intron | 45.0% |
AAAACATGAATGGAGGACGG+TGG | - | chr1_4:62669870-62669889 | None:intergenic | 45.0% | |
AGGGTCGAAAACATGAATGG+AGG | - | chr1_4:62669877-62669896 | None:intergenic | 45.0% | |
! | TCCATTCATGTTTTCGACCC+TGG | + | chr1_4:62669876-62669895 | Msa0176330:intron | 45.0% |
!! | TACTGTTGTCGACTTCATGC+TGG | + | chr1_4:62670060-62670079 | Msa0176330:intron | 45.0% |
!! | TTGTCGACTTCATGCTGGAA+TGG | + | chr1_4:62670065-62670084 | Msa0176330:intron | 45.0% |
!! | TGTCGACTTCATGCTGGAAT+GGG | + | chr1_4:62670066-62670085 | Msa0176330:intron | 45.0% |
!! | TACTGATATGGCGGTTTTGG+CGG | - | chr1_4:62670518-62670537 | None:intergenic | 45.0% |
CGTTGGAGATACTGATATGG+CGG | - | chr1_4:62670527-62670546 | None:intergenic | 45.0% | |
CGCCATATCAGTATCTCCAA+CGG | + | chr1_4:62670525-62670544 | Msa0176330:intron | 45.0% | |
GTCCGTTGGAGATACTGATA+TGG | - | chr1_4:62670530-62670549 | None:intergenic | 45.0% | |
!! | CTAGTCAGTGATGGCTCTAA+CGG | + | chr1_4:62670614-62670633 | Msa0176330:intron | 45.0% |
! | ACATGAGGCATGTTTGGTTC+CGG | + | chr1_4:62670682-62670701 | Msa0176330:intron | 45.0% |
CTGTCAACACACCAAGAGAA+CGG | - | chr1_4:62670796-62670815 | None:intergenic | 45.0% | |
ACAGTTCACGTCAGAGGAAT+GGG | + | chr1_4:62670812-62670831 | Msa0176330:intron | 45.0% | |
GAATGGCTGTCTCTATCTTG+TGG | + | chr1_4:62670856-62670875 | Msa0176330:intron | 45.0% | |
CTCTATCTTGTGGATTTGGC+TGG | + | chr1_4:62670866-62670885 | Msa0176330:intron | 45.0% | |
TATGCTTCCACTGTTGCCTA+GGG | - | chr1_4:62670970-62670989 | None:intergenic | 45.0% | |
ATATGCTTCCACTGTTGCCT+AGG | - | chr1_4:62670971-62670990 | None:intergenic | 45.0% | |
TGAGCATGAATATGACAGGG+AGG | + | chr1_4:62671021-62671040 | Msa0176330:intron | 45.0% | |
GAATGAAACCAGCCAACTCT+TGG | - | chr1_4:62671309-62671328 | None:intergenic | 45.0% | |
TCCACTGGATGCATACATGA+TGG | + | chr1_4:62671366-62671385 | Msa0176330:intron | 45.0% | |
TCCATCATGTATGCATCCAG+TGG | - | chr1_4:62671370-62671389 | None:intergenic | 45.0% | |
TGAAATGGCCCCAATTGCAA+AGG | + | chr1_4:62671513-62671532 | Msa0176330:intron | 45.0% | |
GACTAGTGACAACATCACCA+AGG | - | chr1_4:62671546-62671565 | None:intergenic | 45.0% | |
TACTTTGAGCAATGGGATCC+CGG | + | chr1_4:62671751-62671770 | Msa0176330:intron | 45.0% | |
TTATACCAGCTAGGTCCTAC+CGG | + | chr1_4:62671791-62671810 | Msa0176330:intron | 45.0% | |
TGAACAAGAGATCATCCTCC+AGG | - | chr1_4:62671832-62671851 | None:intergenic | 45.0% | |
CAGAACTTATGCAGCCTAAG+AGG | + | chr1_4:62667907-62667926 | Msa0176330:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | chr1_4:62667965-62667984 | Msa0176330:intron | 45.0% |
!! | TCTACAGCATGCTGCTTTCA+TGG | - | chr1_4:62672421-62672440 | None:intergenic | 45.0% |
TGGGGCTCAGAAAAAAACTG+AGG | + | chr1_4:62672494-62672513 | Msa0176330:CDS | 45.0% | |
! | TTCGAGTTACCTGCTGATGA+AGG | + | chr1_4:62672543-62672562 | Msa0176330:CDS | 45.0% |
TCGCATGTCTCAAACTACTG+GGG | - | chr1_4:62672641-62672660 | None:intergenic | 45.0% | |
TGTTGGACCCAAAGGTTCAA+AGG | - | chr1_4:62672689-62672708 | None:intergenic | 45.0% | |
AAAACAGCTGTTGGACCCAA+AGG | - | chr1_4:62672697-62672716 | None:intergenic | 45.0% | |
!! | GGTCCAACAGCTGTTTTCTA+TGG | + | chr1_4:62672700-62672719 | Msa0176330:intron | 45.0% |
TGGTGTTCAAGGCGGTAAAA+TGG | - | chr1_4:62672869-62672888 | None:intergenic | 45.0% | |
CTGAAGAAGAAGCTGCATCT+AGG | + | chr1_4:62673117-62673136 | Msa0176330:CDS | 45.0% | |
GAAGCTGCATCTAGGAAAAG+GGG | + | chr1_4:62673125-62673144 | Msa0176330:CDS | 45.0% | |
TTACCAGACATGGATGAGAC+GGG | - | chr1_4:62673287-62673306 | None:intergenic | 45.0% | |
CTTACCAGACATGGATGAGA+CGG | - | chr1_4:62673288-62673307 | None:intergenic | 45.0% | |
CATCCATGTCTGGTAAGAGA+AGG | + | chr1_4:62673291-62673310 | Msa0176330:CDS | 45.0% | |
GTTTATACCCTCCAGCCAAA+AGG | - | chr1_4:62673367-62673386 | None:intergenic | 45.0% | |
! | GAGGGTATAAACCGTCATCT+TGG | + | chr1_4:62673375-62673394 | Msa0176330:CDS | 45.0% |
TAAACCGTCATCTTGGTCAC+AGG | + | chr1_4:62673382-62673401 | Msa0176330:CDS | 45.0% | |
AAACCGTCATCTTGGTCACA+GGG | + | chr1_4:62673383-62673402 | Msa0176330:CDS | 45.0% | |
TGTTCTGTCAAGCAGGCAAA+AGG | + | chr1_4:62673409-62673428 | Msa0176330:CDS | 45.0% | |
GTTCTGTCAAGCAGGCAAAA+GGG | + | chr1_4:62673410-62673429 | Msa0176330:CDS | 45.0% | |
! | AAGTCCCGTTTTCATGTAGC+TGG | + | chr1_4:62673709-62673728 | Msa0176330:three_prime_UTR | 45.0% |
AGCAAAGACAGAATCTACGC+CGG | - | chr1_4:62673826-62673845 | None:intergenic | 45.0% | |
GCGTAGATTCTGTCTTTGCT+GGG | + | chr1_4:62673826-62673845 | Msa0176330:three_prime_UTR | 45.0% | |
!!! | TATTTTTTTTTTTTTTTTTG+TGG | - | chr1_4:62666496-62666515 | None:intergenic | 5.0% |
TCCTTCAATGCCCCGATACA+TGG | + | chr1_4:62665591-62665610 | Msa0176330:intron | 50.0% | |
!! | ACCATGTATCGGGGCATTGA+AGG | - | chr1_4:62665595-62665614 | None:intergenic | 50.0% |
TATCTCACACCGCAACGCTA+TGG | - | chr1_4:62665888-62665907 | None:intergenic | 50.0% | |
! | AACGCTTCGTAGCGGTTTTG+CGG | + | chr1_4:62665926-62665945 | Msa0176330:intron | 50.0% |
ATCTGCTCTAGCAGCTGCAA+GGG | - | chr1_4:62666604-62666623 | None:intergenic | 50.0% | |
TATCTGCTCTAGCAGCTGCA+AGG | - | chr1_4:62666605-62666624 | None:intergenic | 50.0% | |
GTTCAGAGAACCCTGAAAGG+AGG | - | chr1_4:62666735-62666754 | None:intergenic | 50.0% | |
ATGCCTTGAGAGAGAGAGCA+AGG | + | chr1_4:62666771-62666790 | Msa0176330:CDS | 50.0% | |
CTTCCTTGCTCTCTCTCTCA+AGG | - | chr1_4:62666777-62666796 | None:intergenic | 50.0% | |
CTTGAAAGAGCTGAACCAGC+TGG | + | chr1_4:62667178-62667197 | Msa0176330:intron | 50.0% | |
! | CTGGCCTCCTTTTCCAATCT+GGG | + | chr1_4:62667197-62667216 | Msa0176330:intron | 50.0% |
TGATGCCAACTGACGCAGTA+CGG | - | chr1_4:62668098-62668117 | None:intergenic | 50.0% | |
ATCAGCCATGGGAGATCAAC+CGG | + | chr1_4:62668150-62668169 | Msa0176330:intron | 50.0% | |
TGTGGACCAATTAGGGTTCG+TGG | + | chr1_4:62668310-62668329 | Msa0176330:intron | 50.0% | |
GATAATCTCTGGCAACACGG+AGG | + | chr1_4:62668523-62668542 | Msa0176330:intron | 50.0% | |
! | CGCCGATTGTGTTATGTGAG+AGG | - | chr1_4:62668951-62668970 | None:intergenic | 50.0% |
AGTCTCCGATGTTACGATCC+TGG | + | chr1_4:62669003-62669022 | Msa0176330:intron | 50.0% | |
ATGACATCAGGTGGTTTCGG+TGG | - | chr1_4:62669144-62669163 | None:intergenic | 50.0% | |
CCGAAACCACCTGATGTCAT+TGG | + | chr1_4:62669144-62669163 | Msa0176330:intron | 50.0% | |
TGTTGGAGATTGGGCGAAAG+TGG | - | chr1_4:62669214-62669233 | None:intergenic | 50.0% | |
TTCGCCCAATCTCCAACAAC+AGG | + | chr1_4:62669216-62669235 | Msa0176330:intron | 50.0% | |
! | TCGGGCCCCTCTTTTTATCA+AGG | + | chr1_4:62669369-62669388 | Msa0176330:intron | 50.0% |
GAACTCGGCCTTAAGATGGA+GGG | - | chr1_4:62669511-62669530 | None:intergenic | 50.0% | |
AGAACTCGGCCTTAAGATGG+AGG | - | chr1_4:62669512-62669531 | None:intergenic | 50.0% | |
!!! | ATCTTTTTGAGGCGGCGAGT+CGG | - | chr1_4:62669535-62669554 | None:intergenic | 50.0% |
GGCAACCGAATGTTCAAGGA+AGG | - | chr1_4:62669637-62669656 | None:intergenic | 50.0% | |
GATCGGCAACCGAATGTTCA+AGG | - | chr1_4:62669641-62669660 | None:intergenic | 50.0% | |
!! | GCTCTACAGTTGTTGGTGAC+CGG | + | chr1_4:62669664-62669683 | Msa0176330:intron | 50.0% |
! | CATCTTCTCTGGCTTACGGA+TGG | - | chr1_4:62669709-62669728 | None:intergenic | 50.0% |
TGCCGTCTCCGCTTATGTAT+CGG | + | chr1_4:62669764-62669783 | Msa0176330:intron | 50.0% | |
GACCGATACATAAGCGGAGA+CGG | - | chr1_4:62669769-62669788 | None:intergenic | 50.0% | |
GCCAGGGTCGAAAACATGAA+TGG | - | chr1_4:62669880-62669899 | None:intergenic | 50.0% | |
GGTCAGAGGAATCGTGTTGT+TGG | + | chr1_4:62670743-62670762 | Msa0176330:intron | 50.0% | |
! | GTGTTGACAGTTCACGTCAG+AGG | + | chr1_4:62670806-62670825 | Msa0176330:intron | 50.0% |
GACAGTTCACGTCAGAGGAA+TGG | + | chr1_4:62670811-62670830 | Msa0176330:intron | 50.0% | |
TTTGGCTGGAAGTGAGAGAG+TGG | + | chr1_4:62670880-62670899 | Msa0176330:intron | 50.0% | |
TGAGAGAGTGGAGAAACCTG+AGG | + | chr1_4:62670892-62670911 | Msa0176330:intron | 50.0% | |
ATGCTTCCACTGTTGCCTAG+GGG | - | chr1_4:62670969-62670988 | None:intergenic | 50.0% | |
! | GGCAACAGTGGAAGCATATG+AGG | + | chr1_4:62670972-62670991 | Msa0176330:intron | 50.0% |
AAGTTCTCCTCAGGCAGTTG+CGG | - | chr1_4:62671136-62671155 | None:intergenic | 50.0% | |
ATGGCCCCAATTGCAAAGGT+TGG | + | chr1_4:62671517-62671536 | Msa0176330:intron | 50.0% | |
GCCTCCAACCTTTGCAATTG+GGG | - | chr1_4:62671524-62671543 | None:intergenic | 50.0% | |
GGCCTCCAACCTTTGCAATT+GGG | - | chr1_4:62671525-62671544 | None:intergenic | 50.0% | |
AGGCCTCCAACCTTTGCAAT+TGG | - | chr1_4:62671526-62671545 | None:intergenic | 50.0% | |
ATTGCAAAGGTTGGAGGCCT+TGG | + | chr1_4:62671526-62671545 | Msa0176330:intron | 50.0% | |
! | GTCCTACCGGTTGAAGCAAT+GGG | + | chr1_4:62671804-62671823 | Msa0176330:intron | 50.0% |
ATCCCATTGCTTCAACCGGT+AGG | - | chr1_4:62671809-62671828 | None:intergenic | 50.0% | |
CAGGATCCCATTGCTTCAAC+CGG | - | chr1_4:62671813-62671832 | None:intergenic | 50.0% | |
TTGAAGCAATGGGATCCTGG+AGG | + | chr1_4:62671814-62671833 | Msa0176330:intron | 50.0% | |
TGGAGGAGACTGATGTAGGA+GGG | + | chr1_4:62671920-62671939 | Msa0176330:intron | 50.0% | |
GAAAGCAGCATGCTGTAGAC+AGG | + | chr1_4:62672422-62672441 | Msa0176330:CDS | 50.0% | |
TCATGCACACCTTCATCAGC+AGG | - | chr1_4:62672555-62672574 | None:intergenic | 50.0% | |
TTACCGCCTTGAACACCATG+AGG | + | chr1_4:62672871-62672890 | Msa0176330:CDS | 50.0% | |
CTTCCTCATGGTGTTCAAGG+CGG | - | chr1_4:62672877-62672896 | None:intergenic | 50.0% | |
CATCTAGGAAAAGGGGCCTT+GGG | + | chr1_4:62673132-62673151 | Msa0176330:CDS | 50.0% | |
!! | GCAGCATCTTGTTCTGAAGC+TGG | - | chr1_4:62673170-62673189 | None:intergenic | 50.0% |
GAACTTCACTTTCGCTGCTG+CGG | - | chr1_4:62673192-62673211 | None:intergenic | 50.0% | |
AATGCTGCTCCCATATTCCC+TGG | + | chr1_4:62673257-62673276 | Msa0176330:CDS | 50.0% | |
ACGGGCAATCCAGGGAATAT+GGG | - | chr1_4:62673269-62673288 | None:intergenic | 50.0% | |
CAGCCTTCTCTTACCAGACA+TGG | - | chr1_4:62673297-62673316 | None:intergenic | 50.0% | |
CATGTCTGGTAAGAGAAGGC+TGG | + | chr1_4:62673295-62673314 | Msa0176330:CDS | 50.0% | |
!! | AAGCGCAGCATCTAGCCTTT+TGG | + | chr1_4:62673349-62673368 | Msa0176330:CDS | 50.0% |
!! | CATCTAGCCTTTTGGCTGGA+GGG | + | chr1_4:62673357-62673376 | Msa0176330:CDS | 50.0% |
TCATGTAGCTGGATTGTGCC+CGG | + | chr1_4:62673720-62673739 | Msa0176330:three_prime_UTR | 50.0% | |
GGCGTAGATTCTGTCTTTGC+TGG | + | chr1_4:62673825-62673844 | Msa0176330:three_prime_UTR | 50.0% | |
CGCAACAAGCCATAGCGTTG+CGG | + | chr1_4:62665876-62665895 | Msa0176330:intron | 55.0% | |
AGCGTTGCGGTGTGAGATAG+CGG | + | chr1_4:62665889-62665908 | Msa0176330:intron | 55.0% | |
! | GTGAGATAGCGGCGCTATAG+CGG | + | chr1_4:62665900-62665919 | Msa0176330:intron | 55.0% |
! | TGGCTTGGATCCCATTCTGG+AGG | - | chr1_4:62666639-62666658 | None:intergenic | 55.0% |
TCCAGAATGGGATCCAAGCC+AGG | + | chr1_4:62666638-62666657 | Msa0176330:CDS | 55.0% | |
!! | ACCTGGCTTGGATCCCATTC+TGG | - | chr1_4:62666642-62666661 | None:intergenic | 55.0% |
GCAGCTACTAAGCGACAGTG+TGG | + | chr1_4:62666843-62666862 | Msa0176330:intron | 55.0% | |
GATTGGAAAAGGAGGCCAGC+TGG | - | chr1_4:62667196-62667215 | None:intergenic | 55.0% | |
!! | GCTGGCCTCCTTTTCCAATC+TGG | + | chr1_4:62667196-62667215 | Msa0176330:intron | 55.0% |
! | TGACGCAGTACGGAAGCGTA+GGG | - | chr1_4:62668088-62668107 | None:intergenic | 55.0% |
TCGAATTCTGCCCTCGTCAC+CGG | - | chr1_4:62668172-62668191 | None:intergenic | 55.0% | |
CGATCTGCAACGCTTTGGTG+AGG | + | chr1_4:62668912-62668931 | Msa0176330:intron | 55.0% | |
CTCCGATGTTACGATCCTGG+CGG | + | chr1_4:62669006-62669025 | Msa0176330:intron | 55.0% | |
TCCGATGTTACGATCCTGGC+GGG | + | chr1_4:62669007-62669026 | Msa0176330:intron | 55.0% | |
ACCCGCCAGGATCGTAACAT+CGG | - | chr1_4:62669011-62669030 | None:intergenic | 55.0% | |
AACGCAACTAGAAACCCGCC+AGG | - | chr1_4:62669024-62669043 | None:intergenic | 55.0% | |
GCATTGCAGATTGGAGGGAG+AGG | - | chr1_4:62669070-62669089 | None:intergenic | 55.0% | |
GTTTCGGTGGCAGTGCAATC+AGG | - | chr1_4:62669131-62669150 | None:intergenic | 55.0% | |
CGGAGAACTCGGCCTTAAGA+TGG | - | chr1_4:62669515-62669534 | None:intergenic | 55.0% | |
ACATGAATGGAGGACGGTGG+TGG | - | chr1_4:62669867-62669886 | None:intergenic | 55.0% | |
GCAGAAAAAGATGCGGGCCA+GGG | - | chr1_4:62669896-62669915 | None:intergenic | 55.0% | |
TGCAGAAAAAGATGCGGGCC+AGG | - | chr1_4:62669897-62669916 | None:intergenic | 55.0% | |
CACCACTCAAAAGCTGCCCA+CGG | - | chr1_4:62670452-62670471 | None:intergenic | 55.0% | |
!! | TGATATGGCGGTTTTGGCGG+TGG | - | chr1_4:62670515-62670534 | None:intergenic | 55.0% |
! | TCACGTCAGAGGAATGGGCT+TGG | + | chr1_4:62670817-62670836 | Msa0176330:intron | 55.0% |
GGCTGTTAGCGAGAGACCAA+AGG | + | chr1_4:62670913-62670932 | Msa0176330:intron | 55.0% | |
ACGATGAACTTTCCCCCCCT+AGG | + | chr1_4:62670951-62670970 | Msa0176330:intron | 55.0% | |
TGCTTCCACTGTTGCCTAGG+GGG | - | chr1_4:62670968-62670987 | None:intergenic | 55.0% | |
TGAAAACCCGCAACTGCCTG+AGG | + | chr1_4:62671126-62671145 | Msa0176330:intron | 55.0% | |
AGTTCTCCTCAGGCAGTTGC+GGG | - | chr1_4:62671135-62671154 | None:intergenic | 55.0% | |
GCCCCAATTGCAAAGGTTGG+AGG | + | chr1_4:62671520-62671539 | Msa0176330:intron | 55.0% | |
TTTGAGCAATGGGATCCCGG+AGG | + | chr1_4:62671754-62671773 | Msa0176330:intron | 55.0% | |
TTCAACCGGTAGGACCTAGC+TGG | - | chr1_4:62671799-62671818 | None:intergenic | 55.0% | |
! | GGTCCTACCGGTTGAAGCAA+TGG | + | chr1_4:62671803-62671822 | Msa0176330:intron | 55.0% |
CGGTTGAAGCAATGGGATCC+TGG | + | chr1_4:62671811-62671830 | Msa0176330:intron | 55.0% | |
GTCGAGTTCTTCAGAGGTGG+AGG | + | chr1_4:62671903-62671922 | Msa0176330:intron | 55.0% | |
GAGGTGGAGGAGACTGATGT+AGG | + | chr1_4:62671916-62671935 | Msa0176330:intron | 55.0% | |
GTGGAGGAGACTGATGTAGG+AGG | + | chr1_4:62671919-62671938 | Msa0176330:intron | 55.0% | |
! | TGACGCAGTACGGAAGCGTA+GGG | - | chr1_4:62668088-62668107 | None:intergenic | 55.0% |
GTCTGGCATCAGACATTCGC+TGG | - | chr1_4:62672943-62672962 | None:intergenic | 55.0% | |
GGCATAGTCGTCCGAATGTC+TGG | - | chr1_4:62672960-62672979 | None:intergenic | 55.0% | |
GCATCTAGGAAAAGGGGCCT+TGG | + | chr1_4:62673131-62673150 | Msa0176330:CDS | 55.0% | |
CTGGAAGCAGTCGAATCCCA+AGG | - | chr1_4:62673151-62673170 | None:intergenic | 55.0% | |
GACGGGCAATCCAGGGAATA+TGG | - | chr1_4:62673270-62673289 | None:intergenic | 55.0% | |
TGGATGAGACGGGCAATCCA+GGG | - | chr1_4:62673277-62673296 | None:intergenic | 55.0% | |
ATGGATGAGACGGGCAATCC+AGG | - | chr1_4:62673278-62673297 | None:intergenic | 55.0% | |
TTGCCCGTCTCATCCATGTC+TGG | + | chr1_4:62673281-62673300 | Msa0176330:CDS | 55.0% | |
!! | GCAGCATCTAGCCTTTTGGC+TGG | + | chr1_4:62673353-62673372 | Msa0176330:CDS | 55.0% |
!! | GCATCTAGCCTTTTGGCTGG+AGG | + | chr1_4:62673356-62673375 | Msa0176330:CDS | 55.0% |
GCTCCCTGTGACCAAGATGA+CGG | - | chr1_4:62673389-62673408 | None:intergenic | 55.0% | |
AGGGAGCTGTTCTGTCAAGC+AGG | + | chr1_4:62673402-62673421 | Msa0176330:CDS | 55.0% | |
GGCCAATAGCGCCGCTATAG+CGG | + | chr1_4:62665822-62665841 | Msa0176330:intron | 60.0% | |
AGCGGTGCAACGCTTCGTAG+CGG | + | chr1_4:62665918-62665937 | Msa0176330:intron | 60.0% | |
! | CTGACGCAGTACGGAAGCGT+AGG | - | chr1_4:62668089-62668108 | None:intergenic | 60.0% |
CGCTTCCGTACTGCGTCAGT+TGG | + | chr1_4:62668090-62668109 | Msa0176330:intron | 60.0% | |
GCGTCAGTTGGCATCAGAGC+AGG | + | chr1_4:62668102-62668121 | Msa0176330:intron | 60.0% | |
! | CGTCACCGGTTGATCTCCCA+TGG | - | chr1_4:62668158-62668177 | None:intergenic | 60.0% |
TGGGAGATCAACCGGTGACG+AGG | + | chr1_4:62668158-62668177 | Msa0176330:intron | 60.0% | |
GGGAGATCAACCGGTGACGA+GGG | + | chr1_4:62668159-62668178 | Msa0176330:intron | 60.0% | |
GAGGGGCCCGAATCTGCTAA+AGG | - | chr1_4:62669360-62669379 | None:intergenic | 60.0% | |
TTACGGATGGGCACCAGCGA+CGG | - | chr1_4:62669696-62669715 | None:intergenic | 60.0% | |
GCGGAGACGGCAGTAACTTG+TGG | - | chr1_4:62669756-62669775 | None:intergenic | 60.0% | |
AGTGTACAATGGCTCCGCCG+TGG | + | chr1_4:62670432-62670451 | Msa0176330:intron | 60.0% | |
GTGTACAATGGCTCCGCCGT+GGG | + | chr1_4:62670433-62670452 | Msa0176330:intron | 60.0% | |
CACTCAAAAGCTGCCCACGG+CGG | - | chr1_4:62670449-62670468 | None:intergenic | 60.0% | |
!! | CGTGGGCAGCTTTTGAGTGG+TGG | + | chr1_4:62670450-62670469 | Msa0176330:intron | 60.0% |
GAGCGAAGCAGCCGTTCTCT+TGG | + | chr1_4:62670782-62670801 | Msa0176330:intron | 60.0% | |
GGTCTCTCGCTAACAGCCTC+AGG | - | chr1_4:62670911-62670930 | None:intergenic | 60.0% | |
TTTCCCCCCCTAGGCAACAG+TGG | + | chr1_4:62670960-62670979 | Msa0176330:intron | 60.0% | |
CTTCCACTGTTGCCTAGGGG+GGG | - | chr1_4:62670966-62670985 | None:intergenic | 60.0% | |
GCTTCCACTGTTGCCTAGGG+GGG | - | chr1_4:62670967-62670986 | None:intergenic | 60.0% | |
CTCGGGGTCGAGTTCTTCAG+AGG | + | chr1_4:62671897-62671916 | Msa0176330:intron | 60.0% | |
GGGGTCGAGTTCTTCAGAGG+TGG | + | chr1_4:62671900-62671919 | Msa0176330:intron | 60.0% | |
! | GTGACGCAGTACGGAAGCGT+AGG | - | chr1_4:62672250-62672269 | None:intergenic | 60.0% |
TGCCTGTGTGGGGAGGGAGT+AGG | + | chr1_4:62665736-62665755 | Msa0176330:intron | 65.0% | |
GCCTGTGTGGGGAGGGAGTA+GGG | + | chr1_4:62665737-62665756 | Msa0176330:intron | 65.0% | |
TCCCTACTCCCTCCCCACAC+AGG | - | chr1_4:62665741-62665760 | None:intergenic | 65.0% | |
GGCCGCTATAGCGGCGCTAT+TGG | - | chr1_4:62665827-62665846 | None:intergenic | 65.0% | |
! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr1_4:62666366-62666385 | None:intergenic | 65.0% |
AGGCGGCGAGTCGGAGAACT+CGG | - | chr1_4:62669526-62669545 | None:intergenic | 65.0% | |
TGACCGGAGAAACCCGTCGC+TGG | + | chr1_4:62669680-62669699 | Msa0176330:intron | 65.0% | |
! | GCACCAGCGACGGGTTTCTC+CGG | - | chr1_4:62669686-62669705 | None:intergenic | 65.0% |
TACGGATGGGCACCAGCGAC+GGG | - | chr1_4:62669695-62669714 | None:intergenic | 65.0% | |
! | CGCCGTGGGCAGCTTTTGAG+TGG | + | chr1_4:62670447-62670466 | Msa0176330:intron | 65.0% |
!! | GGCGGTTTTGGCGGTGGCTT+CGG | - | chr1_4:62670509-62670528 | None:intergenic | 65.0% |
CGCTGGAGACGCACAAGCAC+TGG | - | chr1_4:62672926-62672945 | None:intergenic | 65.0% | |
GCACCGCGCGGCCGCTATAG+CGG | - | chr1_4:62665836-62665855 | None:intergenic | 75.0% | |
GCTATAGCGGCCGCGCGGTG+CGG | + | chr1_4:62665835-62665854 | Msa0176330:intron | 75.0% | |
! | GCGCCGCTATAGCGGCCGCG+CGG | + | chr1_4:62665830-62665849 | Msa0176330:intron | 80.0% |
! | CAGCACCGCACCGCACCGCG+CGG | - | chr1_4:62665848-62665867 | None:intergenic | 80.0% |
! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr1_4:62665840-62665859 | Msa0176330:intron | 85.0% |
! | CGCGCGGTGCGGTGCGGTGC+TGG | + | chr1_4:62665846-62665865 | Msa0176330:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 62665062 | 62673862 | 62665062 | ID=Msa0176330;Name=Msa0176330 |
chr1_4 | mRNA | 62665062 | 62673862 | 62665062 | ID=Msa0176330-mRNA-1;Parent=Msa0176330;Name=Msa0176330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=175|1|1|1|0.83|1|7|405|312 |
chr1_4 | exon | 62665062 | 62665239 | 62665062 | ID=Msa0176330-mRNA-1:exon:20150;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62666597 | 62666659 | 62666597 | ID=Msa0176330-mRNA-1:exon:20151;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62666743 | 62666822 | 62666743 | ID=Msa0176330-mRNA-1:exon:20152;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62667273 | 62667381 | 62667273 | ID=Msa0176330-mRNA-1:exon:20153;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62672405 | 62672564 | 62672405 | ID=Msa0176330-mRNA-1:exon:20154;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62672846 | 62673009 | 62672846 | ID=Msa0176330-mRNA-1:exon:20155;Parent=Msa0176330-mRNA-1 |
chr1_4 | exon | 62673098 | 62673862 | 62673098 | ID=Msa0176330-mRNA-1:exon:20156;Parent=Msa0176330-mRNA-1 |
chr1_4 | five_prime_UTR | 62665062 | 62665236 | 62665062 | ID=Msa0176330-mRNA-1:five_prime_utr;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62665237 | 62665239 | 62665237 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62666597 | 62666659 | 62666597 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62666743 | 62666822 | 62666743 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62667273 | 62667381 | 62667273 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62672405 | 62672564 | 62672405 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62672846 | 62673009 | 62672846 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | CDS | 62673098 | 62673457 | 62673098 | ID=Msa0176330-mRNA-1:cds;Parent=Msa0176330-mRNA-1 |
chr1_4 | three_prime_UTR | 62673458 | 62673862 | 62673458 | ID=Msa0176330-mRNA-1:three_prime_utr;Parent=Msa0176330-mRNA-1 |
Gene Sequence |
Protein sequence |