AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479330 MtrunA17_Chr3g0142141 100.000 262 0 0 1 262 1 262 0.0 551
Msa0479330 MtrunA17_Chr6g0462101 57.447 188 77 3 70 255 1 187 4.38e-76 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479330 AT1G75510.1 63.813 257 74 4 15 258 6 256 1.48e-115 332
Msa0479330 AT3G52270.1 52.569 253 104 5 16 258 23 269 8.77e-91 270
Msa0479330 AT3G52270.2 47.945 146 63 3 16 151 23 165 2.58e-39 136

Find 82 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAGAATTCAGTTTCTTTA+TGG 0.136992 3_3:-84292019 Msa0479330:three_prime_UTR
CAAAATAAATACCTTAAAAT+TGG 0.220511 3_3:+84292803 None:intergenic
TCGACAGATTTCTTGTATTC+AGG 0.238269 3_3:+84292118 None:intergenic
GAACAAAACATCTCTATCTA+TGG 0.258008 3_3:+84291833 None:intergenic
CATGAAAACATGGATGATTA+TGG 0.267501 3_3:-84293046 Msa0479330:CDS
CAGCTCTCCCCGATCTCTTC+TGG 0.310704 3_3:+84292433 None:intergenic
TATTTGAAAGACAGCCTAAC+TGG 0.312463 3_3:-84292391 Msa0479330:CDS
ACTTCACTCTGAAGAATGTT+TGG 0.329366 3_3:-84291920 Msa0479330:three_prime_UTR
TAAACTAGAAGCGTTAAAAT+AGG 0.341414 3_3:-84291659 Msa0479330:three_prime_UTR
TTTGTATCAGTTTGTTTGAC+TGG 0.345873 3_3:+84292461 None:intergenic
CTCTTGAACAAGTTGCTTCA+AGG 0.372812 3_3:+84292367 None:intergenic
AGACGATCCTGCTCATCTTC+AGG 0.374075 3_3:-84296398 Msa0479330:intron
AGATGAGCAGGATCGTCTTC+AGG 0.397793 3_3:+84296403 None:intergenic
GAAACTAAGCCAACCATTCC+AGG 0.403360 3_3:+84292828 None:intergenic
TAGAAGCGTTAAAATAGGTT+GGG 0.408303 3_3:-84291654 Msa0479330:three_prime_UTR
CAGAAGAGATCGGGGAGAGC+TGG 0.423650 3_3:-84292432 Msa0479330:CDS
CAGCTCATAAGTTCCTTGAT+TGG 0.425122 3_3:+84292144 None:intergenic
TACATTGAAAGATGTAAGTA+AGG 0.431869 3_3:+84291605 None:intergenic
AAAGAGAACCAGAAGAGATC+GGG 0.447938 3_3:-84292441 Msa0479330:CDS
CATGATTTAGCAACAGCAAC+AGG 0.461744 3_3:+84296487 None:intergenic
AGTTGCTTCAAGGCCCAGTT+AGG 0.465380 3_3:+84292377 None:intergenic
AAACGACTTTAGAAAGAGGT+TGG 0.468430 3_3:+84296446 None:intergenic
TAGATTTCTTTGTCCTCTCC+CGG 0.471186 3_3:+84293014 None:intergenic
AGACACGAACGAACGAACAT+AGG 0.472862 3_3:-84296641 Msa0479330:five_prime_UTR
TTAGAAAGAGGTTGGGAAGG+TGG 0.474764 3_3:+84296454 None:intergenic
CTAGAAGCGTTAAAATAGGT+TGG 0.476132 3_3:-84291655 Msa0479330:three_prime_UTR
AACGACTTTAGAAAGAGGTT+GGG 0.482387 3_3:+84296447 None:intergenic
AATAAAAGAGGCGCCAATCA+AGG 0.487240 3_3:-84292157 Msa0479330:CDS
GACACGAACGAACGAACATA+GGG 0.487992 3_3:-84296640 Msa0479330:five_prime_UTR
AAAAGAACCTGAAGATGAGC+AGG 0.488410 3_3:+84296391 None:intergenic
TTCAGGAAGAAGAGGATCAA+TGG 0.490261 3_3:+84296420 None:intergenic
ACGCACATGAGGCCAATGCC+TGG 0.492472 3_3:-84292846 Msa0479330:CDS
ACGAACGAACATAGGGAGTA+GGG 0.496756 3_3:-84296633 Msa0479330:five_prime_UTR
CAGTTTACAATGGAGATGTC+TGG 0.505356 3_3:-84294948 Msa0479330:CDS
GAGTAGCGGTGGTTCAAACT+TGG 0.506657 3_3:-84296551 Msa0479330:CDS
GGTGACAAGGTTGCAATGGA+AGG 0.512352 3_3:-84293103 Msa0479330:CDS
CAAAGAGAACCAGAAGAGAT+CGG 0.521004 3_3:-84292442 Msa0479330:CDS
AAATGCAATTATATAAGTAC+AGG 0.524382 3_3:-84291876 Msa0479330:three_prime_UTR
AACAAAACATCTCTATCTAT+GGG 0.524670 3_3:+84291834 None:intergenic
ATGGAAAATTGTGCCGGGAG+AGG 0.527049 3_3:-84293027 Msa0479330:CDS
ATGGAAGATGAAAACAGTTA+CGG 0.527896 3_3:-84296577 Msa0479330:CDS
AGTCAACGTGTTAAGTAAAG+AGG 0.531916 3_3:-84291992 Msa0479330:three_prime_UTR
AAGCCAACCATTCCAGGCAT+TGG 0.534227 3_3:+84292834 None:intergenic
TTTAGGTGACAAGGTTGCAA+TGG 0.535468 3_3:-84293107 Msa0479330:intron
CTGTTGCTGTTGCTAAATCA+TGG 0.543342 3_3:-84296486 Msa0479330:CDS
AGAAGCGTTAAAATAGGTTG+GGG 0.544194 3_3:-84291653 Msa0479330:three_prime_UTR
TTGTGTGTATACAATAAAAG+AGG 0.555378 3_3:-84292169 Msa0479330:CDS
AGATCGATCAAGAATCAAGA+TGG 0.555997 3_3:-84296596 Msa0479330:exon
TTGGCCTCATGTGCGTTCCA+CGG 0.560162 3_3:+84292853 None:intergenic
AACAGTTACGGTGGGAGTAG+CGG 0.562508 3_3:-84296565 Msa0479330:CDS
ATAATTATGTCAGTTTACAA+TGG 0.563019 3_3:-84294958 Msa0479330:intron
GGATCGTCTTCAGGAAGAAG+AGG 0.578158 3_3:+84296412 None:intergenic
AGGCCAATGCCTGGAATGGT+TGG 0.582117 3_3:-84292837 Msa0479330:CDS
AAGAGATCGGGGAGAGCTGG+AGG 0.583017 3_3:-84292429 Msa0479330:CDS
TCTGTCTTACAATTTACCGC+AGG 0.584122 3_3:-84291740 Msa0479330:three_prime_UTR
ATGATTATGGAAAATTGTGC+CGG 0.587668 3_3:-84293033 Msa0479330:CDS
TAGTCTGTGAAGTGAACACT+AGG 0.599847 3_3:+84291680 None:intergenic
CATGAGGCCAATGCCTGGAA+TGG 0.600183 3_3:-84292841 Msa0479330:CDS
AACGAACGAACATAGGGAGT+AGG 0.600860 3_3:-84296634 Msa0479330:five_prime_UTR
ATTTGAAAGACAGCCTAACT+GGG 0.604731 3_3:-84292390 Msa0479330:CDS
ATGACCGTGGAACGCACATG+AGG 0.615692 3_3:-84292857 Msa0479330:CDS
CGAACATAGGGAGTAGGGGA+AGG 0.617733 3_3:-84296628 Msa0479330:five_prime_UTR
GTGACAAGGTTGCAATGGAA+GGG 0.623466 3_3:-84293102 Msa0479330:CDS
AACTCTTGTAGGATAAGAAG+AGG 0.627476 3_3:-84292490 Msa0479330:intron
TGATTATGGAAAATTGTGCC+GGG 0.629025 3_3:-84293032 Msa0479330:CDS
ACTTTAGAAAGAGGTTGGGA+AGG 0.632428 3_3:+84296451 None:intergenic
GAAGTCAAATAAAATTGACT+AGG 0.632493 3_3:-84296679 Msa0479330:five_prime_UTR
TTCAAACTTGGAGACATCGA+AGG 0.637014 3_3:-84296539 Msa0479330:CDS
TACGAAGTTAGAGAAATACA+AGG 0.638398 3_3:+84292062 None:intergenic
AAGAGAACCAGAAGAGATCG+GGG 0.640560 3_3:-84292440 Msa0479330:CDS
GAAGCCACGTCATGAAAACA+TGG 0.640897 3_3:-84293056 Msa0479330:CDS
GAAGATGAAAACAGTTACGG+TGG 0.642023 3_3:-84296574 Msa0479330:CDS
AAGATTATTGCTGATGACCG+TGG 0.649545 3_3:-84292870 Msa0479330:CDS
ATCTTCTCTGAGACAAGCGA+AGG 0.651215 3_3:-84294858 Msa0479330:intron
AGTTACGGTGGGAGTAGCGG+TGG 0.654725 3_3:-84296562 Msa0479330:CDS
TTGTAACGTGAGTACAACGT+TGG 0.659601 3_3:+84291708 None:intergenic
CGAACGAACATAGGGAGTAG+GGG 0.665609 3_3:-84296632 Msa0479330:five_prime_UTR
GTCTCAGAGAAGATGCACAT+AGG 0.676365 3_3:+84294867 None:intergenic
AAGATGAAAACAGTTACGGT+GGG 0.691707 3_3:-84296573 Msa0479330:CDS
ACGTTGGATATATATACCTG+CGG 0.708145 3_3:+84291724 None:intergenic
TCAAGAGACTGATCAACCTG+CGG 0.732985 3_3:-84292351 Msa0479330:intron
CGAAGGCAGAGAGATCTGTG+TGG 0.779053 3_3:-84296522 Msa0479330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAATTAATTAATT+AGG + chr3_3:84292040-84292059 None:intergenic 0.0%
!! AATTAATTAATTAATCATTC+AGG - chr3_3:84292048-84292067 Msa0479330:three_prime_UTR 10.0%
!! ATAAAATTATTAATTACTTG+GGG + chr3_3:84294172-84294191 None:intergenic 10.0%
!!! TTAATTTCTTATTTTAATCA+TGG + chr3_3:84294653-84294672 None:intergenic 10.0%
!! ATGATTAAAATAAGAAATTA+AGG - chr3_3:84294652-84294671 Msa0479330:intron 10.0%
!!! AATATAGATTTTCAACTATT+TGG - chr3_3:84292071-84292090 Msa0479330:three_prime_UTR 15.0%
!!! CACAATTTTTCATATTAATT+GGG + chr3_3:84292709-84292728 None:intergenic 15.0%
!! ATCAATTACAATTTCATAAT+TGG - chr3_3:84293482-84293501 Msa0479330:intron 15.0%
!! TAAAAAAGAAAAAGAAATGA+AGG + chr3_3:84294288-84294307 None:intergenic 15.0%
!!! AACAATTTTACCTTTATTTT+AGG - chr3_3:84295142-84295161 Msa0479330:intron 15.0%
!! TAAGATAATTATTGAATCTT+TGG - chr3_3:84295355-84295374 Msa0479330:intron 15.0%
!! CAAAATAAATACCTTAAAAT+TGG + chr3_3:84295466-84295485 None:intergenic 15.0%
!! AATGCGAAAATAAAATAAAA+TGG + chr3_3:84295957-84295976 None:intergenic 15.0%
!!! ATTTTATTTTATTTTCGCAT+TGG - chr3_3:84295956-84295975 Msa0479330:intron 15.0%
!!! TACTTATATAATTGCATTTT+AGG + chr3_3:84296389-84296408 None:intergenic 15.0%
!! TATAAATCAATTCTCATGTT+TGG + chr3_3:84292522-84292541 None:intergenic 20.0%
!! TTTATAAACCTAGTTATTCA+TGG - chr3_3:84292536-84292555 Msa0479330:intron 20.0%
!!! GCACAATTTTTCATATTAAT+TGG + chr3_3:84292710-84292729 None:intergenic 20.0%
!! CAAAACATTTCCATATTTAA+AGG - chr3_3:84293112-84293131 Msa0479330:intron 20.0%
!! AATAAGCAATCCTTTAAATA+TGG + chr3_3:84293125-84293144 None:intergenic 20.0%
!! TATTATGACATTCATATTTG+TGG - chr3_3:84293167-84293186 Msa0479330:intron 20.0%
!! ATAATTATGTCAGTTTACAA+TGG - chr3_3:84293308-84293327 Msa0479330:intron 20.0%
!!! ATATTCAAAGAATACGTTTT+TGG + chr3_3:84293363-84293382 None:intergenic 20.0%
!!! TGAAATTGTAATTGATGATT+AGG + chr3_3:84293478-84293497 None:intergenic 20.0%
!!! CAGTTTTATGGTTTAAATTA+TGG - chr3_3:84293620-84293639 Msa0479330:intron 20.0%
!! ATAACATAATATTTGAACCA+TGG + chr3_3:84294048-84294067 None:intergenic 20.0%
!! CATAATATTTGAACAAACAT+CGG + chr3_3:84294110-84294129 None:intergenic 20.0%
!!! AAACAAATGAAAGTAGATTT+TGG + chr3_3:84294213-84294232 None:intergenic 20.0%
!! ATTCCATTAAGTTTCAATTA+TGG + chr3_3:84294436-84294455 None:intergenic 20.0%
!! CTCAAATATACAATACAATA+TGG + chr3_3:84294465-84294484 None:intergenic 20.0%
!!! TCAAAAAGTATTGAAAAAGT+AGG + chr3_3:84294516-84294535 None:intergenic 20.0%
!! TGCAATGTATTTATTATCTT+CGG - chr3_3:84294550-84294569 Msa0479330:intron 20.0%
!! AGTTGAAATTCATAAAACAA+AGG + chr3_3:84294902-84294921 None:intergenic 20.0%
!! CATTAGAAATAAAAGAACAT+TGG + chr3_3:84294962-84294981 None:intergenic 20.0%
!!! TTTTACTTATATTAAGTACC+TGG - chr3_3:84295518-84295537 Msa0479330:intron 20.0%
!! TACATATATAAATGCATTGA+AGG - chr3_3:84296017-84296036 Msa0479330:intron 20.0%
!!! ATTTTAGGTAAAAAGATTTC+AGG + chr3_3:84296374-84296393 None:intergenic 20.0%
!! AAATGCAATTATATAAGTAC+AGG - chr3_3:84296390-84296409 Msa0479330:intron 20.0%
! GAAGTCAAATAAAATTGACT+AGG - chr3_3:84291587-84291606 Msa0479330:three_prime_UTR 25.0%
! AAGTGATTAAACCAAAATCA+GGG + chr3_3:84291929-84291948 None:intergenic 25.0%
! AAAGTGATTAAACCAAAATC+AGG + chr3_3:84291930-84291949 None:intergenic 25.0%
!! TACTTGTTAGATTAGATTGT+AGG - chr3_3:84291951-84291970 Msa0479330:three_prime_UTR 25.0%
!!! ACTTTGATTTTATGCTGTTT+AGG - chr3_3:84291999-84292018 Msa0479330:three_prime_UTR 25.0%
! ACAATTTACTTTATTACCCT+TGG + chr3_3:84292402-84292421 None:intergenic 25.0%
! AAGTAAATTGTCGAGTTAAT+TGG - chr3_3:84292411-84292430 Msa0479330:CDS 25.0%
! TGAATAATGATTTGAAGAGT+AGG - chr3_3:84292917-84292936 Msa0479330:intron 25.0%
!! TCACTGTGATTTAACAATTT+TGG - chr3_3:84293037-84293056 Msa0479330:CDS 25.0%
!! CACTGTGATTTAACAATTTT+GGG - chr3_3:84293038-84293057 Msa0479330:CDS 25.0%
! GTAAACTGACATAATTATGA+AGG + chr3_3:84293306-84293325 None:intergenic 25.0%
!! TTTTATATTACATGTCTGCA+TGG + chr3_3:84293584-84293603 None:intergenic 25.0%
!! TGATGATTTCATCAGTTTTA+TGG - chr3_3:84293608-84293627 Msa0479330:intron 25.0%
! TCTAGATTCAAATTGTGAAT+TGG - chr3_3:84293651-84293670 Msa0479330:intron 25.0%
!! TTGAATCTTGAATTAGTTTG+AGG + chr3_3:84293762-84293781 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+TGG - chr3_3:84293789-84293808 Msa0479330:intron 25.0%
! ACAAATTGACAAGTAAAAAG+TGG - chr3_3:84293820-84293839 Msa0479330:intron 25.0%
! AAGTTTATGTAGTGATTCAT+TGG - chr3_3:84293854-84293873 Msa0479330:intron 25.0%
! TTATGCAGTTCAAAAAACAA+AGG - chr3_3:84294336-84294355 Msa0479330:intron 25.0%
! TTGCCATAATTGAAACTTAA+TGG - chr3_3:84294430-84294449 Msa0479330:intron 25.0%
! AAAGAAAAGGTCAAAAATTC+GGG + chr3_3:84294743-84294762 None:intergenic 25.0%
! GAAAGAAAAGGTCAAAAATT+CGG + chr3_3:84294744-84294763 None:intergenic 25.0%
!! ATTTTTGACCTTTTCTTTCA+TGG - chr3_3:84294745-84294764 Msa0479330:intron 25.0%
! TAAAATTGTTACCAAACTCA+AGG + chr3_3:84295132-84295151 None:intergenic 25.0%
!! CTTAGTTTCATCCAATTTTA+AGG - chr3_3:84295452-84295471 Msa0479330:intron 25.0%
! AAATCACAATAAGAGTTCAT+TGG - chr3_3:84295665-84295684 Msa0479330:intron 25.0%
! TTGTGTGTATACAATAAAAG+AGG - chr3_3:84296097-84296116 Msa0479330:intron 25.0%
! AACAAAACATCTCTATCTAT+GGG + chr3_3:84296435-84296454 None:intergenic 25.0%
!!! TAAACTAGAAGCGTTAAAAT+AGG - chr3_3:84296607-84296626 Msa0479330:five_prime_UTR 25.0%
! TACATTGAAAGATGTAAGTA+AGG + chr3_3:84296664-84296683 None:intergenic 25.0%
!!! AAGACTTTTTTTTCTTCTTC+TGG - chr3_3:84296687-84296706 Msa0479330:five_prime_UTR 25.0%
ATGGAAGATGAAAACAGTTA+CGG - chr3_3:84291689-84291708 Msa0479330:three_prime_UTR 30.0%
! GAAAAAACGACTTTAGAAAG+AGG + chr3_3:84291827-84291846 None:intergenic 30.0%
! ATCCTATGCAATTGCAATTT+TGG - chr3_3:84292134-84292153 Msa0479330:CDS 30.0%
AACCAAAATTGCAATTGCAT+AGG + chr3_3:84292139-84292158 None:intergenic 30.0%
!!! AATTGGTTTTCCGGATTAAT+CGG - chr3_3:84292280-84292299 Msa0479330:intron 30.0%
TATATTCGATTTCTGACCAA+GGG - chr3_3:84292383-84292402 Msa0479330:CDS 30.0%
TGCAAATCAAATTCCATGTT+TGG + chr3_3:84292464-84292483 None:intergenic 30.0%
GTAATTGAAATCCAAATGAG+CGG + chr3_3:84292604-84292623 None:intergenic 30.0%
TCCATGTATAATATACCAAC+TGG - chr3_3:84292869-84292888 Msa0479330:CDS 30.0%
! ACCAGTTGGTATATTATACA+TGG + chr3_3:84292873-84292892 None:intergenic 30.0%
ATATGCAAAAAAACACCAGT+TGG + chr3_3:84292887-84292906 None:intergenic 30.0%
TAGTAATCAATCCTGGAAAA+TGG + chr3_3:84293082-84293101 None:intergenic 30.0%
! ATTTTCCAGGATTGATTACT+AGG - chr3_3:84293081-84293100 Msa0479330:CDS 30.0%
TCGATTCATGAATGGAAAAA+AGG + chr3_3:84293681-84293700 None:intergenic 30.0%
!! TTATGTTTTGCTATGTCACA+AGG + chr3_3:84293705-84293724 None:intergenic 30.0%
AATGACAAAAGAAAAGTGGT+TGG - chr3_3:84293793-84293812 Msa0479330:intron 30.0%
ATTGACAAGTAAAAAGTGGT+TGG - chr3_3:84293824-84293843 Msa0479330:intron 30.0%
TGCGATTCATCATAATGAAT+TGG - chr3_3:84293909-84293928 Msa0479330:intron 30.0%
ATATTTGAACCATGGTTAAC+TGG + chr3_3:84294040-84294059 None:intergenic 30.0%
! TATTGCTGATTATGTTGAGT+TGG - chr3_3:84294065-84294084 Msa0479330:intron 30.0%
CTACACAACGATATTATTGT+TGG - chr3_3:84294597-84294616 Msa0479330:intron 30.0%
! GAGACTATGCTTTTATATCT+GGG - chr3_3:84294619-84294638 Msa0479330:intron 30.0%
AAGAAAAGGTCAAAAATTCG+GGG + chr3_3:84294742-84294761 None:intergenic 30.0%
AGAATAATTCTTCAGTTCAG+AGG + chr3_3:84294814-84294833 None:intergenic 30.0%
AAAAGTAGATCTGACATAGA+AGG - chr3_3:84294875-84294894 Msa0479330:CDS 30.0%
!!! TACCTTTATTTTAGGTGACA+AGG - chr3_3:84295150-84295169 Msa0479330:intron 30.0%
AACCTTGTCACCTAAAATAA+AGG + chr3_3:84295155-84295174 None:intergenic 30.0%
CATGAAAACATGGATGATTA+TGG - chr3_3:84295220-84295239 Msa0479330:intron 30.0%
ATGATTATGGAAAATTGTGC+CGG - chr3_3:84295233-84295252 Msa0479330:intron 30.0%
GATTAAAAATCGTCAAGTAC+AGG - chr3_3:84295276-84295295 Msa0479330:intron 30.0%
ACAATTAAGCGATAGTTCAA+TGG + chr3_3:84295318-84295337 None:intergenic 30.0%
ATAATCTTCCAGTTGAATCA+AGG + chr3_3:84295384-84295403 None:intergenic 30.0%
GTAAAAGTTAACATGAGCAA+TGG + chr3_3:84295504-84295523 None:intergenic 30.0%
TACTTATATTAAGTACCTGG+CGG - chr3_3:84295521-84295540 Msa0479330:intron 30.0%
! TTTGTATCAGTTTGTTTGAC+TGG + chr3_3:84295808-84295827 None:intergenic 30.0%
TACGAAGTTAGAGAAATACA+AGG + chr3_3:84296207-84296226 None:intergenic 30.0%
TCGAGAATTCAGTTTCTTTA+TGG - chr3_3:84296247-84296266 Msa0479330:intron 30.0%
GAACAAAACATCTCTATCTA+TGG + chr3_3:84296436-84296455 None:intergenic 30.0%
!! TAGAAGCGTTAAAATAGGTT+GGG - chr3_3:84296612-84296631 Msa0479330:five_prime_UTR 30.0%
AGATCGATCAAGAATCAAGA+TGG - chr3_3:84291670-84291689 Msa0479330:three_prime_UTR 35.0%
AAGATGAAAACAGTTACGGT+GGG - chr3_3:84291693-84291712 Msa0479330:three_prime_UTR 35.0%
! AACGACTTTAGAAAGAGGTT+GGG + chr3_3:84291822-84291841 None:intergenic 35.0%
! AAACGACTTTAGAAAGAGGT+TGG + chr3_3:84291823-84291842 None:intergenic 35.0%
! TCTTTCACTATCCCTGATTT+TGG - chr3_3:84291915-84291934 Msa0479330:three_prime_UTR 35.0%
TAAACTTGATATCCAACCCA+GGG + chr3_3:84292307-84292326 None:intergenic 35.0%
TTAAACTTGATATCCAACCC+AGG + chr3_3:84292308-84292327 None:intergenic 35.0%
GTATATTCGATTTCTGACCA+AGG - chr3_3:84292382-84292401 Msa0479330:CDS 35.0%
AATCAAATTCCATGTTTGGC+TGG + chr3_3:84292460-84292479 None:intergenic 35.0%
GCATTAAATTACAGAAGTCG+CGG - chr3_3:84292662-84292681 Msa0479330:intron 35.0%
TGTCATTCTGATGAATTGCA+TGG - chr3_3:84292763-84292782 Msa0479330:intron 35.0%
ATCTATATGAAGTGGACAAG+TGG + chr3_3:84292822-84292841 None:intergenic 35.0%
ACTTGTCCACTTCATATAGA+TGG - chr3_3:84292821-84292840 Msa0479330:CDS 35.0%
TAGTTGCCATCTATATGAAG+TGG + chr3_3:84292830-84292849 None:intergenic 35.0%
! GAATCTCGATTTGATAACCA+TGG - chr3_3:84292958-84292977 Msa0479330:intron 35.0%
TTAAAAGTTTGTGGCAACCA+TGG + chr3_3:84292978-84292997 None:intergenic 35.0%
! GGCAAAATGAGTTTTTGCAT+GGG + chr3_3:84293002-84293021 None:intergenic 35.0%
CAGTGAAACATTCAAATCGA+GGG + chr3_3:84293023-84293042 None:intergenic 35.0%
ACAGTGAAACATTCAAATCG+AGG + chr3_3:84293024-84293043 None:intergenic 35.0%
GTGATTCATTGGAATGAATC+AGG - chr3_3:84293865-84293884 Msa0479330:intron 35.0%
TTGTAAGATCCAGTTAACCA+TGG - chr3_3:84294028-84294047 Msa0479330:intron 35.0%
CAGTTCAAAAAACAAAGGTG+AGG - chr3_3:84294341-84294360 Msa0479330:intron 35.0%
TATCGTTGTGTAGTAGATCA+AGG + chr3_3:84294590-84294609 None:intergenic 35.0%
! GGAGACTATGCTTTTATATC+TGG - chr3_3:84294618-84294637 Msa0479330:intron 35.0%
!! ACCTCTTGCAGTTTTATATG+AGG - chr3_3:84294700-84294719 Msa0479330:intron 35.0%
TCCTCATATAAAACTGCAAG+AGG + chr3_3:84294704-84294723 None:intergenic 35.0%
AGAAAAGGTCAAAAATTCGG+GGG + chr3_3:84294741-84294760 None:intergenic 35.0%
AAAGGTGACCATGAAAGAAA+AGG + chr3_3:84294756-84294775 None:intergenic 35.0%
AACGTGTCATGAGGAAAAAA+AGG + chr3_3:84294774-84294793 None:intergenic 35.0%
CACAATTAAAACGTGTCATG+AGG + chr3_3:84294783-84294802 None:intergenic 35.0%
!!! GCACTCGTCACTTTTTTTTA+GGG + chr3_3:84295055-84295074 None:intergenic 35.0%
!!! AGCACTCGTCACTTTTTTTT+AGG + chr3_3:84295056-84295075 None:intergenic 35.0%
CAGTTATCACAGTAAAAGCT+TGG - chr3_3:84295103-84295122 Msa0479330:intron 35.0%
TGATTATGGAAAATTGTGCC+GGG - chr3_3:84295234-84295253 Msa0479330:intron 35.0%
! TTTGGTTTCCTTGATTCAAC+TGG - chr3_3:84295373-84295392 Msa0479330:intron 35.0%
GTATGATACAGTAGATTCTC+AGG - chr3_3:84295606-84295625 Msa0479330:intron 35.0%
AGTTCATTGGAATTGATCCT+TGG - chr3_3:84295678-84295697 Msa0479330:intron 35.0%
!! TACTCTTCTGAAACTCTTGT+AGG - chr3_3:84295765-84295784 Msa0479330:intron 35.0%
AACTCTTGTAGGATAAGAAG+AGG - chr3_3:84295776-84295795 Msa0479330:intron 35.0%
TATTTGAAAGACAGCCTAAC+TGG - chr3_3:84295875-84295894 Msa0479330:intron 35.0%
ATTTGAAAGACAGCCTAACT+GGG - chr3_3:84295876-84295895 Msa0479330:intron 35.0%
CCAAAAAAAAAACATACCGC+AGG + chr3_3:84295934-84295953 None:intergenic 35.0%
!!! CCTGCGGTATGTTTTTTTTT+TGG - chr3_3:84295931-84295950 Msa0479330:intron 35.0%
TCGACAGATTTCTTGTATTC+AGG + chr3_3:84296151-84296170 None:intergenic 35.0%
AGTCAACGTGTTAAGTAAAG+AGG - chr3_3:84296274-84296293 Msa0479330:intron 35.0%
! ACTTCACTCTGAAGAATGTT+TGG - chr3_3:84296346-84296365 Msa0479330:intron 35.0%
!!! ATCGTGCCTGTTTTAGTTTT+TGG - chr3_3:84296491-84296510 Msa0479330:CDS 35.0%
!!! TGCCTGTTTTAGTTTTTGGA+GGG - chr3_3:84296495-84296514 Msa0479330:CDS 35.0%
ACGTTGGATATATATACCTG+CGG + chr3_3:84296545-84296564 None:intergenic 35.0%
!! CTAGAAGCGTTAAAATAGGT+TGG - chr3_3:84296611-84296630 Msa0479330:five_prime_UTR 35.0%
!! AGAAGCGTTAAAATAGGTTG+GGG - chr3_3:84296613-84296632 Msa0479330:five_prime_UTR 35.0%
GAAGATGAAAACAGTTACGG+TGG - chr3_3:84291692-84291711 Msa0479330:three_prime_UTR 40.0%
TTCAAACTTGGAGACATCGA+AGG - chr3_3:84291727-84291746 Msa0479330:three_prime_UTR 40.0%
CATGATTTAGCAACAGCAAC+AGG + chr3_3:84291782-84291801 None:intergenic 40.0%
! CTGTTGCTGTTGCTAAATCA+TGG - chr3_3:84291780-84291799 Msa0479330:three_prime_UTR 40.0%
! ACTTTAGAAAGAGGTTGGGA+AGG + chr3_3:84291818-84291837 None:intergenic 40.0%
TTCAGGAAGAAGAGGATCAA+TGG + chr3_3:84291849-84291868 None:intergenic 40.0%
AAAAGAACCTGAAGATGAGC+AGG + chr3_3:84291878-84291897 None:intergenic 40.0%
ATTCAAACTGAGACCTAGAG+AGG + chr3_3:84292187-84292206 None:intergenic 40.0%
! AGCTTTGCTATGCCTCAATT+GGG - chr3_3:84292250-84292269 Msa0479330:intron 40.0%
TGGCGTATATTCGAGGTTAA+TGG + chr3_3:84292440-84292459 None:intergenic 40.0%
CCATAGCACCATGAATAACT+AGG + chr3_3:84292547-84292566 None:intergenic 40.0%
! CCTAGTTATTCATGGTGCTA+TGG - chr3_3:84292544-84292563 Msa0479330:intron 40.0%
AATGCAACGAATGCTGCTAT+AGG + chr3_3:84292647-84292666 None:intergenic 40.0%
TGCATGGGCTTAAAAGTTTG+TGG + chr3_3:84292987-84293006 None:intergenic 40.0%
! GGGCAAAATGAGTTTTTGCA+TGG + chr3_3:84293003-84293022 None:intergenic 40.0%
ACGAACCTAGTAATCAATCC+TGG + chr3_3:84293089-84293108 None:intergenic 40.0%
! ATATTTGTGGACTGTGCACT+AGG - chr3_3:84293180-84293199 Msa0479330:intron 40.0%
TGACTGTCTTAAAGCAACAC+AGG + chr3_3:84293270-84293289 None:intergenic 40.0%
CAGTTTACAATGGAGATGTC+TGG - chr3_3:84293318-84293337 Msa0479330:intron 40.0%
CACAAGGTTCGATTCATGAA+TGG + chr3_3:84293689-84293708 None:intergenic 40.0%
ATCTCTAGCGTGTATCTACA+CGG + chr3_3:84293956-84293975 None:intergenic 40.0%
! CGCTAGAGATTTGTATCGAT+TGG - chr3_3:84293966-84293985 Msa0479330:intron 40.0%
!! TGCTGATTATGTTGAGTTGG+TGG - chr3_3:84294068-84294087 Msa0479330:intron 40.0%
TAGATTAGAGGCAGAGTTGA+AGG + chr3_3:84294255-84294274 None:intergenic 40.0%
CTGCCTCTAATCTAATATCG+TGG - chr3_3:84294261-84294280 Msa0479330:intron 40.0%
GGACCACGATATTAGATTAG+AGG + chr3_3:84294267-84294286 None:intergenic 40.0%
TTGTGTAGTAGATCAAGGAG+GGG + chr3_3:84294585-84294604 None:intergenic 40.0%
GTTGTGTAGTAGATCAAGGA+GGG + chr3_3:84294586-84294605 None:intergenic 40.0%
AAAAGGTCAAAAATTCGGGG+GGG + chr3_3:84294739-84294758 None:intergenic 40.0%
GAAAAGGTCAAAAATTCGGG+GGG + chr3_3:84294740-84294759 None:intergenic 40.0%
TTTCTTATCCTGTGCCCTTA+GGG - chr3_3:84295014-84295033 Msa0479330:intron 40.0%
AAGCTTGGTTTCCTTGAGTT+TGG - chr3_3:84295118-84295137 Msa0479330:intron 40.0%
TTTAGGTGACAAGGTTGCAA+TGG - chr3_3:84295159-84295178 Msa0479330:intron 40.0%
! TCATCCATGTTTTCATGACG+TGG + chr3_3:84295217-84295236 None:intergenic 40.0%
TAGATTTCTTTGTCCTCTCC+CGG + chr3_3:84295255-84295274 None:intergenic 40.0%
AAGATTATTGCTGATGACCG+TGG - chr3_3:84295396-84295415 Msa0479330:intron 40.0%
TTGGAATTGATCCTTGGAGA+AGG - chr3_3:84295684-84295703 Msa0479330:intron 40.0%
CATGCATGGAGTAATTCTGT+GGG - chr3_3:84295733-84295752 Msa0479330:intron 40.0%
ATGCATGGAGTAATTCTGTG+GGG - chr3_3:84295734-84295753 Msa0479330:intron 40.0%
CAAAGAGAACCAGAAGAGAT+CGG - chr3_3:84295824-84295843 Msa0479330:intron 40.0%
AAAGAGAACCAGAAGAGATC+GGG - chr3_3:84295825-84295844 Msa0479330:intron 40.0%
CTCTTGAACAAGTTGCTTCA+AGG + chr3_3:84295902-84295921 None:intergenic 40.0%
! GCATTGGAACACTCTGATTT+TGG - chr3_3:84295972-84295991 Msa0479330:intron 40.0%
!!! ATTTTGGTTTCTCACAGCTC+TGG - chr3_3:84295988-84296007 Msa0479330:intron 40.0%
ATTGCTGCAGCAGAAATAGT+GGG + chr3_3:84296054-84296073 None:intergenic 40.0%
!! AATAAAAGAGGCGCCAATCA+AGG - chr3_3:84296109-84296128 Msa0479330:intron 40.0%
CAGCTCATAAGTTCCTTGAT+TGG + chr3_3:84296125-84296144 None:intergenic 40.0%
! CTCGATCTTCTTTTCAGTGA+CGG + chr3_3:84296232-84296251 None:intergenic 40.0%
!!! GTGCCTGTTTTAGTTTTTGG+AGG - chr3_3:84296494-84296513 Msa0479330:CDS 40.0%
TGCCCTCCAAAAACTAAAAC+AGG + chr3_3:84296500-84296519 None:intergenic 40.0%
TCTGTCTTACAATTTACCGC+AGG - chr3_3:84296526-84296545 Msa0479330:CDS 40.0%
TTGTAACGTGAGTACAACGT+TGG + chr3_3:84296561-84296580 None:intergenic 40.0%
TAGTCTGTGAAGTGAACACT+AGG + chr3_3:84296589-84296608 None:intergenic 40.0%
AGACACGAACGAACGAACAT+AGG - chr3_3:84291625-84291644 Msa0479330:three_prime_UTR 45.0%
GACACGAACGAACGAACATA+GGG - chr3_3:84291626-84291645 Msa0479330:three_prime_UTR 45.0%
AACGAACGAACATAGGGAGT+AGG - chr3_3:84291632-84291651 Msa0479330:three_prime_UTR 45.0%
ACGAACGAACATAGGGAGTA+GGG - chr3_3:84291633-84291652 Msa0479330:three_prime_UTR 45.0%
TTAGAAAGAGGTTGGGAAGG+TGG + chr3_3:84291815-84291834 None:intergenic 45.0%
TGGTCCAACACAAGAACTGT+TGG + chr3_3:84292220-84292239 None:intergenic 45.0%
TTGTGTTGGACCAGTCCATA+TGG - chr3_3:84292227-84292246 Msa0479330:intron 45.0%
TAGCAAAGCTCCATATGGAC+TGG + chr3_3:84292240-84292259 None:intergenic 45.0%
AGGCATAGCAAAGCTCCATA+TGG + chr3_3:84292245-84292264 None:intergenic 45.0%
! GAGCTTTGCTATGCCTCAAT+TGG - chr3_3:84292249-84292268 Msa0479330:intron 45.0%
TTGCTATGCCTCAATTGGGA+CGG - chr3_3:84292254-84292273 Msa0479330:intron 45.0%
GAATATACGCCAGCCAAACA+TGG - chr3_3:84292448-84292467 Msa0479330:CDS 45.0%
CAATCCTGGAAAATGGCACA+TGG + chr3_3:84293075-84293094 None:intergenic 45.0%
GTCTCAGAGAAGATGCACAT+AGG + chr3_3:84293402-84293421 None:intergenic 45.0%
!! ATCTTCTCTGAGACAAGCGA+AGG - chr3_3:84293408-84293427 Msa0479330:intron 45.0%
CGTTGTGTAGTAGATCAAGG+AGG + chr3_3:84294587-84294606 None:intergenic 45.0%
GAGGTTTCACTGCTACAAAG+TGG + chr3_3:84294685-84294704 None:intergenic 45.0%
AAAGGTCAAAAATTCGGGGG+GGG + chr3_3:84294738-84294757 None:intergenic 45.0%
GTTTCTTATCCTGTGCCCTT+AGG - chr3_3:84295013-84295032 Msa0479330:intron 45.0%
! CTTGCTAACTTGTGCCCTAA+GGG + chr3_3:84295031-84295050 None:intergenic 45.0%
! TCTTGCTAACTTGTGCCCTA+AGG + chr3_3:84295032-84295051 None:intergenic 45.0%
GTGACAAGGTTGCAATGGAA+GGG - chr3_3:84295164-84295183 Msa0479330:intron 45.0%
GAAGCCACGTCATGAAAACA+TGG - chr3_3:84295210-84295229 Msa0479330:intron 45.0%
GAAACTAAGCCAACCATTCC+AGG + chr3_3:84295441-84295460 None:intergenic 45.0%
ATATTAAGTACCTGGCGGTG+TGG - chr3_3:84295526-84295545 Msa0479330:intron 45.0%
GAAGGAACAAACCTTCTCCA+AGG + chr3_3:84295698-84295717 None:intergenic 45.0%
ATGCACACACGCACATTTGA+AGG + chr3_3:84295716-84295735 None:intergenic 45.0%
GCATGCATGGAGTAATTCTG+TGG - chr3_3:84295732-84295751 Msa0479330:intron 45.0%
AAGAGAACCAGAAGAGATCG+GGG - chr3_3:84295826-84295845 Msa0479330:intron 45.0%
TCAAGAGACTGATCAACCTG+CGG - chr3_3:84295915-84295934 Msa0479330:intron 45.0%
!! AATAAAATTATTAATTACTT+GGG + chr3_3:84294173-84294192 None:intergenic 5.0%
!! AAATAAAATTATTAATTACT+TGG + chr3_3:84294174-84294193 None:intergenic 5.0%
CGAACGAACATAGGGAGTAG+GGG - chr3_3:84291634-84291653 Msa0479330:three_prime_UTR 50.0%
AACAGTTACGGTGGGAGTAG+CGG - chr3_3:84291701-84291720 Msa0479330:three_prime_UTR 50.0%
GAGTAGCGGTGGTTCAAACT+TGG - chr3_3:84291715-84291734 Msa0479330:three_prime_UTR 50.0%
GGATCGTCTTCAGGAAGAAG+AGG + chr3_3:84291857-84291876 None:intergenic 50.0%
AGATGAGCAGGATCGTCTTC+AGG + chr3_3:84291866-84291885 None:intergenic 50.0%
AGACGATCCTGCTCATCTTC+AGG - chr3_3:84291868-84291887 Msa0479330:three_prime_UTR 50.0%
! CTAGAGAGGAGCACACTTCT+AGG + chr3_3:84292173-84292192 None:intergenic 50.0%
! CTAGAAGTGTGCTCCTCTCT+AGG - chr3_3:84292171-84292190 Msa0479330:CDS 50.0%
GGTCTCAGTTTGAATCCTCC+AGG - chr3_3:84292192-84292211 Msa0479330:CDS 50.0%
!! ACACAAGAACTGTTGGCTCC+TGG + chr3_3:84292213-84292232 None:intergenic 50.0%
GGAGCCAACAGTTCTTGTGT+TGG - chr3_3:84292213-84292232 Msa0479330:intron 50.0%
CAATTCCACCGTCCCAATTG+AGG + chr3_3:84292265-84292284 None:intergenic 50.0%
CTCAATTGGGACGGTGGAAT+TGG - chr3_3:84292263-84292282 Msa0479330:intron 50.0%
!!! GGACGGTGGAATTGGTTTTC+CGG - chr3_3:84292271-84292290 Msa0479330:intron 50.0%
TTTCCGGATTAATCGGTCCC+TGG - chr3_3:84292287-84292306 Msa0479330:intron 50.0%
TTCCGGATTAATCGGTCCCT+GGG - chr3_3:84292288-84292307 Msa0479330:intron 50.0%
AACCCAGGGACCGATTAATC+CGG + chr3_3:84292293-84292312 None:intergenic 50.0%
GTTTGGCTGGCGTATATTCG+AGG + chr3_3:84292447-84292466 None:intergenic 50.0%
! GTGCTATGGCTGTGCTATTG+CGG - chr3_3:84292558-84292577 Msa0479330:intron 50.0%
AAATCCAAATGAGCGGCCGA+AGG + chr3_3:84292597-84292616 None:intergenic 50.0%
GCTGTGTGCACAAAGTTCAG+GGG + chr3_3:84292800-84292819 None:intergenic 50.0%
GGCTGTGTGCACAAAGTTCA+GGG + chr3_3:84292801-84292820 None:intergenic 50.0%
TGGCTGTGTGCACAAAGTTC+AGG + chr3_3:84292802-84292821 None:intergenic 50.0%
! AAATGGCACATGGTGGTGAC+TGG + chr3_3:84293065-84293084 None:intergenic 50.0%
!!! ACCACCATGTGCCATTTTCC+AGG - chr3_3:84293068-84293087 Msa0479330:CDS 50.0%
TCCTGGAAAATGGCACATGG+TGG + chr3_3:84293072-84293091 None:intergenic 50.0%
AAGGTCAAAAATTCGGGGGG+GGG + chr3_3:84294737-84294756 None:intergenic 50.0%
GGTGACAAGGTTGCAATGGA+AGG - chr3_3:84295163-84295182 Msa0479330:intron 50.0%
ATGGAAAATTGTGCCGGGAG+AGG - chr3_3:84295239-84295258 Msa0479330:intron 50.0%
AAGCCAACCATTCCAGGCAT+TGG + chr3_3:84295435-84295454 None:intergenic 50.0%
AATGTGCGTGTGTGCATGCA+TGG - chr3_3:84295719-84295738 Msa0479330:intron 50.0%
AGTTGCTTCAAGGCCCAGTT+AGG + chr3_3:84295892-84295911 None:intergenic 50.0%
CGAACATAGGGAGTAGGGGA+AGG - chr3_3:84291638-84291657 Msa0479330:three_prime_UTR 55.0%
CGAAGGCAGAGAGATCTGTG+TGG - chr3_3:84291744-84291763 Msa0479330:three_prime_UTR 55.0%
!! CAAGAACTGTTGGCTCCTGG+AGG + chr3_3:84292210-84292229 None:intergenic 55.0%
CTATGCCTCAATTGGGACGG+TGG - chr3_3:84292257-84292276 Msa0479330:intron 55.0%
GGATTAATCGGTCCCTGGGT+TGG - chr3_3:84292292-84292311 Msa0479330:intron 55.0%
CGGCTGAACATTGCAGCCTT+CGG - chr3_3:84292578-84292597 Msa0479330:intron 55.0%
AGGTCAAAAATTCGGGGGGG+GGG + chr3_3:84294736-84294755 None:intergenic 55.0%
! AACTTGTGCCCTAAGGGCAC+AGG + chr3_3:84295025-84295044 None:intergenic 55.0%
ATGACCGTGGAACGCACATG+AGG - chr3_3:84295409-84295428 Msa0479330:intron 55.0%
TTGGCCTCATGTGCGTTCCA+CGG + chr3_3:84295416-84295435 None:intergenic 55.0%
CATGAGGCCAATGCCTGGAA+TGG - chr3_3:84295425-84295444 Msa0479330:intron 55.0%
AGGCCAATGCCTGGAATGGT+TGG - chr3_3:84295429-84295448 Msa0479330:intron 55.0%
TGTGAAACTTCCACACCGCC+AGG + chr3_3:84295539-84295558 None:intergenic 55.0%
AGTTACGGTGGGAGTAGCGG+TGG - chr3_3:84291704-84291723 Msa0479330:three_prime_UTR 60.0%
TCAAAAATTCGGGGGGGGGG+GGG + chr3_3:84294733-84294752 None:intergenic 60.0%
GTCAAAAATTCGGGGGGGGG+GGG + chr3_3:84294734-84294753 None:intergenic 60.0%
GGTCAAAAATTCGGGGGGGG+GGG + chr3_3:84294735-84294754 None:intergenic 60.0%
ACGCACATGAGGCCAATGCC+TGG - chr3_3:84295420-84295439 Msa0479330:intron 60.0%
CAGCTCTCCCCGATCTCTTC+TGG + chr3_3:84295836-84295855 None:intergenic 60.0%
CAGAAGAGATCGGGGAGAGC+TGG - chr3_3:84295834-84295853 Msa0479330:intron 60.0%
AAGAGATCGGGGAGAGCTGG+AGG - chr3_3:84295837-84295856 Msa0479330:intron 60.0%
GCAGCCTTCGGCCGCTCATT+TGG - chr3_3:84292590-84292609 Msa0479330:intron 65.0%
AAAAATTCGGGGGGGGGGGG+GGG + chr3_3:84294731-84294750 None:intergenic 65.0%
CAAAAATTCGGGGGGGGGGG+GGG + chr3_3:84294732-84294751 None:intergenic 65.0%
AAAATTCGGGGGGGGGGGGG+GGG + chr3_3:84294730-84294749 None:intergenic 70.0%
AAATTCGGGGGGGGGGGGGG+GGG + chr3_3:84294729-84294748 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84291574 84296714 84291574 ID=Msa0479330;Name=Msa0479330
chr3_3 mRNA 84291574 84296714 84291574 ID=Msa0479330-mRNA-1;Parent=Msa0479330;Name=Msa0479330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=115|1|1|1|1|1|6|525|262
chr3_3 exon 84291574 84292218 84291574 ID=Msa0479330-mRNA-1:exon:23925;Parent=Msa0479330-mRNA-1
chr3_3 exon 84292352 84292501 84292352 ID=Msa0479330-mRNA-1:exon:23924;Parent=Msa0479330-mRNA-1
chr3_3 exon 84292815 84292889 84292815 ID=Msa0479330-mRNA-1:exon:23923;Parent=Msa0479330-mRNA-1
chr3_3 exon 84292991 84293124 84292991 ID=Msa0479330-mRNA-1:exon:23922;Parent=Msa0479330-mRNA-1
chr3_3 exon 84294859 84294967 84294859 ID=Msa0479330-mRNA-1:exon:23921;Parent=Msa0479330-mRNA-1
chr3_3 exon 84296399 84296714 84296399 ID=Msa0479330-mRNA-1:exon:23920;Parent=Msa0479330-mRNA-1
chr3_3 five_prime_UTR 84296600 84296714 84296600 ID=Msa0479330-mRNA-1:five_prime_utr;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84296399 84296599 84296399 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84294859 84294967 84294859 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84292991 84293124 84292991 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84292815 84292889 84292815 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84292352 84292501 84292352 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 CDS 84292099 84292218 84292099 ID=Msa0479330-mRNA-1:cds;Parent=Msa0479330-mRNA-1
chr3_3 three_prime_UTR 84291574 84292098 84291574 ID=Msa0479330-mRNA-1:three_prime_utr;Parent=Msa0479330-mRNA-1
Gene Sequence

>Msa0479330

ATGGAAGATGAAAACAGTTACGGTGGGAGTAGCGGTGGTTCAAACTTGGAGACATCGAAGGCAGAGAGATCTGTGTGGCTTATGAAGTGTCCTGTTGCTGTTGCTAAATCATGGCAGAATCATCCACCTTCCCAACCTCTTTCTAAAGTCGTTTTTTCCATTGATCCTCTTCTTCCTGAAGACGATCCTGCTCATCTTCAGTTTACAATGGAGATGTCTGGCACTGAAGCTGTGAATATGCCAAAAACGTATTCTTTGAATATGTTTAAAGACTTCGTTCCTATGTGCATCTTCTCTGAGACAAGCGAAGGTGACAAGGTTGCAATGGAAGGGAAAGTAGAGCATAAGTTTGATATGAAGCCACGTCATGAAAACATGGATGATTATGGAAAATTGTGCCGGGAGAGGACAAAGAAATCTATGATTAAAAATCGTCAAGTACAGATTATTGCTGATGACCGTGGAACGCACATGAGGCCAATGCCTGGAATGGTTGGCTTAGTTTCATCCAATTTTAAGGATAAGAAGAGGACACAGCCAGTCAAACAAACTGATACAAAGAGAACCAGAAGAGATCGGGGAGAGCTGGAGGATATAATGTTCAAACTATTTGAAAGACAGCCTAACTGGGCCTTGAAGCAACTTGTTCAAGAGACTGATCAACCTGCGCAATTCTTGAAAGAGATCTTGAATGAATTGTGTGTATACAATAAAAGAGGCGCCAATCAAGGAACTTATGAGCTGAAACCTGAATACAAGAAATCTGTCGAAGATGCAAACGCTGAATAA

Protein sequence

>Msa0479330

MEDENSYGGSSGGSNLETSKAERSVWLMKCPVAVAKSWQNHPPSQPLSKVVFSIDPLLPEDDPAHLQFTMEMSGTEAVNMPKTYSLNMFKDFVPMCIFSETSEGDKVAMEGKVEHKFDMKPRHENMDDYGKLCRERTKKSMIKNRQVQIIADDRGTHMRPMPGMVGLVSSNFKDKKRTQPVKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVEDANAE*