Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015555.t1 | PNX71133.1 | 91.7 | 241 | 6 | 1 | 1 | 227 | 1 | 241 | 9.80E-133 | 482.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015555.t1 | P50700 | 68.4 | 225 | 55 | 3 | 1 | 211 | 1 | 223 | 3.7e-88 | 325.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015555.t1 | A0A2K3KXY1 | 91.7 | 241 | 6 | 1 | 1 | 227 | 1 | 241 | 7.0e-133 | 482.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20542 | MS.gene015555 | PPI |
MS.gene24315 | MS.gene015555 | PPI |
MS.gene42360 | MS.gene015555 | PPI |
MS.gene56731 | MS.gene015555 | PPI |
MS.gene69123 | MS.gene015555 | PPI |
MS.gene94553 | MS.gene015555 | PPI |
MS.gene015555 | MS.gene26931 | PPI |
MS.gene014545 | MS.gene015555 | PPI |
MS.gene056186 | MS.gene015555 | PPI |
MS.gene42714 | MS.gene015555 | PPI |
MS.gene040126 | MS.gene015555 | PPI |
MS.gene056184 | MS.gene015555 | PPI |
MS.gene27345 | MS.gene015555 | PPI |
MS.gene015555 | MS.gene010631 | PPI |
MS.gene046990 | MS.gene015555 | PPI |
MS.gene92397 | MS.gene015555 | PPI |
MS.gene92395 | MS.gene015555 | PPI |
MS.gene64778 | MS.gene015555 | PPI |
MS.gene016652 | MS.gene015555 | PPI |
MS.gene45764 | MS.gene015555 | PPI |
MS.gene59476 | MS.gene015555 | PPI |
MS.gene015555 | MS.gene92393 | PPI |
MS.gene68072 | MS.gene015555 | PPI |
MS.gene93762 | MS.gene015555 | PPI |
MS.gene062716 | MS.gene015555 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015555.t1 | MTR_5g010635 | 92.116 | 241 | 5 | 1 | 1 | 227 | 1 | 241 | 3.18e-163 | 450 |
MS.gene015555.t1 | MTR_8g096900 | 57.919 | 221 | 76 | 3 | 6 | 211 | 30 | 248 | 3.55e-89 | 263 |
MS.gene015555.t1 | MTR_5g010640 | 50.877 | 228 | 89 | 2 | 7 | 211 | 9 | 236 | 3.30e-79 | 238 |
MS.gene015555.t1 | MTR_8g096910 | 40.708 | 226 | 69 | 5 | 1 | 211 | 1 | 176 | 8.05e-44 | 145 |
MS.gene015555.t1 | MTR_5g059200 | 42.986 | 221 | 92 | 9 | 19 | 210 | 24 | 239 | 3.61e-43 | 147 |
MS.gene015555.t1 | MTR_1g025420 | 37.247 | 247 | 116 | 9 | 1 | 210 | 1 | 245 | 6.54e-43 | 145 |
MS.gene015555.t1 | MTR_1g025420 | 37.247 | 247 | 116 | 9 | 1 | 210 | 1 | 245 | 1.10e-42 | 147 |
MS.gene015555.t1 | MTR_2g067980 | 39.919 | 248 | 107 | 11 | 1 | 211 | 5 | 247 | 1.11e-42 | 154 |
MS.gene015555.t1 | MTR_6g079580 | 39.583 | 240 | 107 | 9 | 6 | 211 | 5 | 240 | 2.87e-42 | 143 |
MS.gene015555.t1 | MTR_7g102380 | 39.916 | 238 | 107 | 10 | 9 | 211 | 5 | 241 | 9.42e-42 | 142 |
MS.gene015555.t1 | MTR_8g096920 | 38.938 | 226 | 70 | 5 | 1 | 211 | 1 | 173 | 1.58e-41 | 139 |
MS.gene015555.t1 | MTR_1g021945 | 39.912 | 228 | 101 | 8 | 21 | 214 | 23 | 248 | 1.81e-41 | 141 |
MS.gene015555.t1 | MTR_4g073730 | 37.600 | 250 | 110 | 10 | 1 | 212 | 8 | 249 | 2.30e-41 | 142 |
MS.gene015555.t1 | MTR_4g073730 | 37.600 | 250 | 110 | 10 | 1 | 212 | 8 | 249 | 3.34e-41 | 143 |
MS.gene015555.t1 | MTR_5g022310 | 37.549 | 253 | 114 | 11 | 1 | 211 | 1 | 251 | 7.40e-41 | 140 |
MS.gene015555.t1 | MTR_5g022310 | 38.057 | 247 | 109 | 11 | 7 | 211 | 7 | 251 | 1.14e-40 | 141 |
MS.gene015555.t1 | MTR_1g062590 | 37.037 | 243 | 117 | 9 | 4 | 211 | 1 | 242 | 1.39e-40 | 139 |
MS.gene015555.t1 | MTR_1g062630 | 36.905 | 252 | 121 | 11 | 4 | 220 | 1 | 249 | 1.72e-40 | 139 |
MS.gene015555.t1 | MTR_8g037890 | 39.256 | 242 | 107 | 11 | 8 | 211 | 8 | 247 | 5.04e-40 | 140 |
MS.gene015555.t1 | MTR_3g114030 | 37.611 | 226 | 103 | 8 | 23 | 211 | 6 | 230 | 8.27e-40 | 137 |
MS.gene015555.t1 | MTR_8g056820 | 37.449 | 243 | 112 | 10 | 7 | 211 | 7 | 247 | 1.26e-39 | 137 |
MS.gene015555.t1 | MTR_8g075510 | 37.805 | 246 | 108 | 11 | 3 | 216 | 17 | 249 | 2.23e-39 | 136 |
MS.gene015555.t1 | MTR_2g068030 | 38.865 | 229 | 102 | 9 | 18 | 210 | 17 | 243 | 2.61e-39 | 136 |
MS.gene015555.t1 | MTR_2g069660 | 37.238 | 239 | 116 | 7 | 7 | 211 | 5 | 243 | 9.23e-39 | 134 |
MS.gene015555.t1 | MTR_4g073720 | 40.329 | 243 | 108 | 13 | 1 | 210 | 1 | 239 | 1.27e-38 | 137 |
MS.gene015555.t1 | MTR_3g111620 | 39.091 | 220 | 98 | 9 | 26 | 211 | 29 | 246 | 1.43e-38 | 134 |
MS.gene015555.t1 | MTR_8g075510 | 37.917 | 240 | 104 | 11 | 3 | 210 | 17 | 243 | 1.30e-37 | 133 |
MS.gene015555.t1 | MTR_5g022350 | 36.965 | 257 | 114 | 15 | 3 | 225 | 14 | 256 | 1.47e-37 | 133 |
MS.gene015555.t1 | MTR_8g107140 | 35.628 | 247 | 117 | 10 | 2 | 211 | 4 | 245 | 2.31e-37 | 131 |
MS.gene015555.t1 | MTR_1g062340 | 38.222 | 225 | 98 | 9 | 24 | 211 | 22 | 242 | 6.40e-37 | 130 |
MS.gene015555.t1 | MTR_8g075550 | 37.555 | 229 | 100 | 9 | 23 | 210 | 27 | 253 | 6.45e-37 | 131 |
MS.gene015555.t1 | MTR_8g036215 | 34.855 | 241 | 119 | 10 | 4 | 210 | 1 | 237 | 7.15e-36 | 127 |
MS.gene015555.t1 | MTR_4g063630 | 35.897 | 234 | 112 | 9 | 14 | 210 | 19 | 251 | 8.22e-36 | 127 |
MS.gene015555.t1 | MTR_3g068015 | 38.356 | 219 | 98 | 9 | 28 | 211 | 32 | 248 | 2.11e-35 | 126 |
MS.gene015555.t1 | MTR_1g062350 | 38.288 | 222 | 102 | 8 | 24 | 211 | 22 | 242 | 2.46e-35 | 125 |
MS.gene015555.t1 | MTR_1g062370 | 37.838 | 222 | 103 | 8 | 24 | 211 | 22 | 242 | 4.72e-35 | 125 |
MS.gene015555.t1 | MTR_1g062660 | 36.910 | 233 | 112 | 8 | 13 | 211 | 11 | 242 | 6.78e-35 | 124 |
MS.gene015555.t1 | MTR_2g068655 | 35.656 | 244 | 119 | 9 | 5 | 212 | 12 | 253 | 4.54e-34 | 124 |
MS.gene015555.t1 | MTR_7g062610 | 34.818 | 247 | 120 | 10 | 1 | 211 | 1 | 242 | 1.96e-33 | 120 |
MS.gene015555.t1 | MTR_6g009480 | 34.000 | 250 | 123 | 10 | 4 | 213 | 7 | 254 | 5.51e-33 | 120 |
MS.gene015555.t1 | MTR_2g067990 | 39.524 | 210 | 93 | 9 | 23 | 211 | 26 | 222 | 2.13e-31 | 121 |
MS.gene015555.t1 | MTR_1g062690 | 35.407 | 209 | 102 | 8 | 24 | 211 | 22 | 218 | 1.35e-25 | 99.8 |
MS.gene015555.t1 | MTR_8g089020 | 38.095 | 126 | 65 | 4 | 84 | 199 | 31 | 153 | 1.87e-21 | 87.4 |
MS.gene015555.t1 | MTR_2g067970 | 32.124 | 193 | 97 | 9 | 58 | 219 | 1 | 190 | 3.85e-19 | 85.9 |
MS.gene015555.t1 | MTR_5g023850 | 30.357 | 168 | 88 | 6 | 9 | 147 | 11 | 178 | 1.13e-16 | 76.3 |
MS.gene015555.t1 | MTR_1g062390 | 26.582 | 237 | 139 | 9 | 6 | 211 | 6 | 238 | 6.49e-16 | 74.7 |
MS.gene015555.t1 | MTR_7g076360 | 30.319 | 188 | 84 | 7 | 21 | 199 | 5 | 154 | 6.16e-15 | 70.5 |
MS.gene015555.t1 | MTR_2g063150 | 27.039 | 233 | 133 | 11 | 1 | 199 | 10 | 239 | 6.97e-13 | 66.2 |
MS.gene015555.t1 | MTR_5g022350 | 35.252 | 139 | 55 | 8 | 3 | 116 | 79 | 207 | 4.63e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015555.t1 | AT4G11650 | 68.444 | 225 | 55 | 3 | 1 | 211 | 1 | 223 | 3.06e-107 | 309 |
MS.gene015555.t1 | AT1G75050 | 40.083 | 242 | 110 | 7 | 3 | 211 | 4 | 243 | 6.54e-47 | 155 |
MS.gene015555.t1 | AT4G38670 | 37.295 | 244 | 114 | 9 | 6 | 211 | 5 | 247 | 2.23e-46 | 155 |
MS.gene015555.t1 | AT4G38670 | 37.295 | 244 | 114 | 9 | 6 | 211 | 5 | 247 | 2.23e-46 | 155 |
MS.gene015555.t1 | AT1G75040 | 38.115 | 244 | 113 | 8 | 1 | 211 | 1 | 239 | 1.01e-44 | 150 |
MS.gene015555.t1 | AT4G38670 | 38.158 | 228 | 102 | 9 | 22 | 211 | 5 | 231 | 2.72e-43 | 147 |
MS.gene015555.t1 | AT1G77700 | 40.171 | 234 | 106 | 8 | 6 | 210 | 43 | 271 | 5.06e-43 | 148 |
MS.gene015555.t1 | AT1G77700 | 40.171 | 234 | 106 | 8 | 6 | 210 | 43 | 271 | 6.36e-43 | 147 |
MS.gene015555.t1 | AT1G75030 | 37.959 | 245 | 116 | 8 | 1 | 211 | 1 | 243 | 1.44e-42 | 144 |
MS.gene015555.t1 | AT2G17860 | 38.017 | 242 | 107 | 9 | 11 | 211 | 10 | 249 | 2.90e-42 | 144 |
MS.gene015555.t1 | AT4G38660 | 42.017 | 238 | 104 | 11 | 5 | 211 | 11 | 245 | 4.53e-42 | 145 |
MS.gene015555.t1 | AT1G77700 | 40.826 | 218 | 95 | 8 | 22 | 210 | 87 | 299 | 6.88e-42 | 145 |
MS.gene015555.t1 | AT1G75800 | 37.991 | 229 | 102 | 8 | 22 | 211 | 21 | 248 | 5.11e-41 | 142 |
MS.gene015555.t1 | AT1G20030 | 38.496 | 226 | 99 | 8 | 25 | 211 | 4 | 228 | 1.19e-40 | 141 |
MS.gene015555.t1 | AT1G20030 | 38.496 | 226 | 99 | 8 | 25 | 211 | 21 | 245 | 1.92e-40 | 141 |
MS.gene015555.t1 | AT5G24620 | 37.849 | 251 | 109 | 11 | 3 | 211 | 6 | 251 | 5.95e-40 | 142 |
MS.gene015555.t1 | AT4G36010 | 37.657 | 239 | 105 | 9 | 22 | 218 | 21 | 257 | 8.77e-40 | 139 |
MS.gene015555.t1 | AT4G36010 | 37.657 | 239 | 105 | 9 | 22 | 218 | 21 | 257 | 8.77e-40 | 139 |
MS.gene015555.t1 | AT5G24620 | 37.849 | 251 | 109 | 11 | 3 | 211 | 61 | 306 | 8.78e-40 | 142 |
MS.gene015555.t1 | AT5G24620 | 37.849 | 251 | 109 | 11 | 3 | 211 | 82 | 327 | 1.34e-39 | 142 |
MS.gene015555.t1 | AT1G19320 | 36.585 | 246 | 112 | 11 | 1 | 210 | 9 | 246 | 9.63e-39 | 134 |
MS.gene015555.t1 | AT4G38660 | 41.778 | 225 | 97 | 11 | 18 | 211 | 2 | 223 | 1.45e-38 | 136 |
MS.gene015555.t1 | AT1G73620 | 38.222 | 225 | 102 | 9 | 21 | 211 | 39 | 260 | 2.99e-37 | 131 |
MS.gene015555.t1 | AT1G18250 | 37.778 | 225 | 103 | 9 | 21 | 211 | 19 | 240 | 1.53e-36 | 129 |
MS.gene015555.t1 | AT1G18250 | 37.333 | 225 | 104 | 9 | 21 | 211 | 18 | 239 | 2.74e-36 | 128 |
MS.gene015555.t1 | AT4G24180 | 36.145 | 249 | 119 | 11 | 1 | 211 | 10 | 256 | 1.34e-35 | 127 |
MS.gene015555.t1 | AT5G38280 | 33.463 | 257 | 130 | 9 | 7 | 224 | 9 | 263 | 3.12e-35 | 132 |
MS.gene015555.t1 | AT5G38280 | 33.463 | 257 | 130 | 9 | 7 | 224 | 9 | 263 | 3.39e-35 | 132 |
MS.gene015555.t1 | AT4G24180 | 36.145 | 249 | 119 | 11 | 1 | 211 | 10 | 256 | 5.11e-35 | 127 |
MS.gene015555.t1 | AT4G24180 | 36.515 | 241 | 112 | 12 | 9 | 211 | 14 | 251 | 1.27e-34 | 124 |
MS.gene015555.t1 | AT4G24180 | 36.515 | 241 | 112 | 12 | 9 | 211 | 14 | 251 | 3.89e-34 | 124 |
MS.gene015555.t1 | AT4G36000 | 45.714 | 140 | 68 | 5 | 78 | 211 | 1 | 138 | 1.06e-33 | 120 |
MS.gene015555.t1 | AT4G36000 | 45.714 | 140 | 68 | 5 | 78 | 211 | 1 | 138 | 1.06e-33 | 120 |
MS.gene015555.t1 | AT2G28790 | 33.613 | 238 | 118 | 10 | 13 | 210 | 11 | 248 | 3.35e-32 | 117 |
MS.gene015555.t1 | AT2G28790 | 33.613 | 238 | 118 | 10 | 13 | 210 | 36 | 273 | 4.38e-32 | 118 |
MS.gene015555.t1 | AT1G70250 | 32.314 | 229 | 112 | 8 | 22 | 211 | 143 | 367 | 7.24e-30 | 117 |
MS.gene015555.t1 | AT5G40020 | 29.508 | 244 | 136 | 10 | 2 | 211 | 7 | 248 | 3.70e-29 | 110 |
MS.gene015555.t1 | AT4G24180 | 34.764 | 233 | 113 | 10 | 1 | 195 | 10 | 241 | 3.81e-29 | 111 |
MS.gene015555.t1 | AT4G24180 | 35.111 | 225 | 106 | 11 | 9 | 195 | 14 | 236 | 3.43e-28 | 108 |
MS.gene015555.t1 | AT5G02140 | 34.177 | 237 | 120 | 10 | 10 | 211 | 6 | 241 | 6.02e-28 | 107 |
MS.gene015555.t1 | AT5G02140 | 34.177 | 237 | 120 | 10 | 10 | 211 | 6 | 241 | 8.38e-28 | 106 |
MS.gene015555.t1 | AT4G18250 | 34.615 | 156 | 91 | 6 | 71 | 216 | 123 | 277 | 1.92e-21 | 92.8 |
MS.gene015555.t1 | AT5G24620 | 42.623 | 122 | 50 | 5 | 108 | 211 | 15 | 134 | 4.77e-20 | 86.7 |
MS.gene015555.t1 | AT4G18253 | 28.750 | 240 | 128 | 10 | 7 | 211 | 7 | 238 | 1.95e-17 | 78.6 |
Find 80 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCGCCATGGCTCGTATTT+GGG | 0.216063 | 5.1:-4193727 | MS.gene015555:CDS |
ATGGATTTCTTCCCTCTTAA+TGG | 0.218122 | 5.1:-4190696 | MS.gene015555:CDS |
GTACCGCCATGGCTCGTATT+TGG | 0.222625 | 5.1:-4193728 | MS.gene015555:CDS |
AAGGAGTGAGGGTGAGTAGT+AGG | 0.288125 | 5.1:+4193871 | None:intergenic |
TCGAGGCGGCGACCACCGCC+TGG | 0.296708 | 5.1:+4193786 | None:intergenic |
AGAAATCTTGATTTCCGAAT+TGG | 0.317167 | 5.1:+4190754 | None:intergenic |
ACAATTGCCCTTACACCGTT+TGG | 0.330621 | 5.1:-4193821 | MS.gene015555:CDS |
AATGAATATTGTTGCACTAA+TGG | 0.346009 | 5.1:-4190570 | MS.gene015555:CDS |
CCTTGAGTCCTCAATTCCTT+AGG | 0.351684 | 5.1:+4190627 | None:intergenic |
GCAGCTGCCCAAACGGTGTA+AGG | 0.366048 | 5.1:+4193813 | None:intergenic |
GAATTGGTTTAACGCATATT+CGG | 0.379434 | 5.1:+4190770 | None:intergenic |
TACACACTGGTCTGGTTTAG+TGG | 0.389430 | 5.1:+4190384 | None:intergenic |
TGGACTCCAATGTACTGGTT+GGG | 0.393400 | 5.1:-4190814 | MS.gene015555:CDS |
GCATATTCGGCTAATGTGTT+TGG | 0.402845 | 5.1:+4190783 | None:intergenic |
ATTAGTGCAACAATATTCAT+TGG | 0.423057 | 5.1:+4190572 | None:intergenic |
AGTTGCACTGCCGATATTAA+CGG | 0.432233 | 5.1:-4190657 | MS.gene015555:CDS |
TGGGCTAGCAGCTGCCCAAA+CGG | 0.440365 | 5.1:+4193806 | None:intergenic |
CAATTGCCCTTACACCGTTT+GGG | 0.441211 | 5.1:-4193820 | MS.gene015555:CDS |
GCGGTCAAACATGGAACCTC+TGG | 0.442503 | 5.1:-4193761 | MS.gene015555:CDS |
CATTTCAATACACACTGGTC+TGG | 0.444048 | 5.1:+4190376 | None:intergenic |
TTATGACATCCACCATTAAG+AGG | 0.444579 | 5.1:+4190684 | None:intergenic |
AGTACTTTCACTTGTCCTGC+TGG | 0.444797 | 5.1:-4190459 | MS.gene015555:CDS |
TCCATGTTTGACCGCGGTCG+AGG | 0.458130 | 5.1:+4193769 | None:intergenic |
AGGAGTGAGGGTGAGTAGTA+GGG | 0.465064 | 5.1:+4193872 | None:intergenic |
AGGGCACTGTCCGTTAATAT+CGG | 0.472010 | 5.1:+4190647 | None:intergenic |
CTTGAGTCCTCAATTCCTTA+GGG | 0.473616 | 5.1:+4190628 | None:intergenic |
GAATATGCGTTAAACCAATT+CGG | 0.474473 | 5.1:-4190768 | MS.gene015555:CDS |
TATTCGGCTAATGTGTTTGG+TGG | 0.475364 | 5.1:+4190786 | None:intergenic |
AAGTGGGTCCACAGCTTCCT+TGG | 0.484930 | 5.1:+4190547 | None:intergenic |
TACTTGTTGGATCATCTTGA+GGG | 0.496803 | 5.1:+4190478 | None:intergenic |
ATTGTTGACGATCTCAAAGT+TGG | 0.500722 | 5.1:+4193839 | None:intergenic |
ATACGAGCCATGGCGGTACC+AGG | 0.507450 | 5.1:+4193732 | None:intergenic |
GCAGCTGCTAGCCCAGGCGG+TGG | 0.514788 | 5.1:-4193798 | MS.gene015555:CDS |
GTTTGGGCAGCTGCTAGCCC+AGG | 0.516906 | 5.1:-4193804 | MS.gene015555:CDS |
GCCTCGACCGCGGTCAAACA+TGG | 0.523542 | 5.1:-4193770 | MS.gene015555:CDS |
CGATGGTTTCAACATCCCAA+TGG | 0.524206 | 5.1:-4190715 | MS.gene015555:CDS |
GTGGACTCCAATGTACTGGT+TGG | 0.524692 | 5.1:-4190815 | MS.gene015555:CDS |
TACGACATCTCACTTGTCGA+TGG | 0.528359 | 5.1:-4190732 | MS.gene015555:CDS |
GGACAAGTGAAAGTACTTGT+TGG | 0.531593 | 5.1:+4190465 | None:intergenic |
GATTTCTTCCCTCTTAATGG+TGG | 0.535456 | 5.1:-4190693 | MS.gene015555:CDS |
GTACTTGTTGGATCATCTTG+AGG | 0.536813 | 5.1:+4190477 | None:intergenic |
GCTCGTATTTGGGGTCGCAC+CGG | 0.540712 | 5.1:-4193717 | MS.gene015555:intron |
TGGAACCTCTGGGTTAATCC+TGG | 0.543119 | 5.1:-4193750 | MS.gene015555:CDS |
GTGGACCCACTTATTTCTCA+AGG | 0.546200 | 5.1:-4190536 | MS.gene015555:CDS |
TCAAAGTTGGCTGCTTGTGA+AGG | 0.547034 | 5.1:+4193852 | None:intergenic |
TTAAGAGGGAAGAAATCCAT+TGG | 0.547257 | 5.1:+4190699 | None:intergenic |
GGACTCCAATGTACTGGTTG+GGG | 0.549101 | 5.1:-4190813 | MS.gene015555:CDS |
TTTAGTGGCATCTCAATATG+AGG | 0.552341 | 5.1:+4190399 | None:intergenic |
TAAGAGGGAAGAAATCCATT+GGG | 0.555277 | 5.1:+4190700 | None:intergenic |
CGAGGCGGCGACCACCGCCT+GGG | 0.558748 | 5.1:+4193787 | None:intergenic |
GACAGTGCCCTAAGGAATTG+AGG | 0.563268 | 5.1:-4190635 | MS.gene015555:CDS |
ACCGGTGGACTCCAATGTAC+TGG | 0.567872 | 5.1:-4190819 | MS.gene015555:CDS |
GGGAGCATAGTGTGAATGTG+AGG | 0.572658 | 5.1:+4193892 | None:intergenic |
GGTTAATCCTGGTACCGCCA+TGG | 0.575016 | 5.1:-4193739 | MS.gene015555:CDS |
TATTGTTGCACTAATGGCCA+AGG | 0.575870 | 5.1:-4190564 | MS.gene015555:CDS |
CAGCTGCCCAAACGGTGTAA+GGG | 0.577110 | 5.1:+4193814 | None:intergenic |
GGACACCCCAACCAGTACAT+TGG | 0.577383 | 5.1:+4190808 | None:intergenic |
ACCGCCATGGCTCGTATTTG+GGG | 0.579247 | 5.1:-4193726 | MS.gene015555:CDS |
CCTAAGGAATTGAGGACTCA+AGG | 0.579944 | 5.1:-4190627 | MS.gene015555:CDS |
TGCCAAACAGGTGATTGCAC+CGG | 0.588418 | 5.1:-4190837 | MS.gene015555:intron |
ATTCGGCTAATGTGTTTGGT+GGG | 0.589352 | 5.1:+4190787 | None:intergenic |
TGGGCAGCTGCTAGCCCAGG+CGG | 0.593879 | 5.1:-4193801 | MS.gene015555:CDS |
GCGACCCCAAATACGAGCCA+TGG | 0.594263 | 5.1:+4193722 | None:intergenic |
ACCAGTACATTGGAGTCCAC+CGG | 0.599388 | 5.1:+4190818 | None:intergenic |
GGTGGTCGCCGCCTCGACCG+CGG | 0.599782 | 5.1:-4193780 | MS.gene015555:CDS |
CGGTCAAACATGGAACCTCT+GGG | 0.601212 | 5.1:-4193760 | MS.gene015555:CDS |
TATGACATCCACCATTAAGA+GGG | 0.601387 | 5.1:+4190685 | None:intergenic |
ATGTTTGACCGCGGTCGAGG+CGG | 0.603815 | 5.1:+4193772 | None:intergenic |
TGGCTGCTTGTGAAGGAGTG+AGG | 0.609598 | 5.1:+4193859 | None:intergenic |
GGCTGCTTGTGAAGGAGTGA+GGG | 0.609799 | 5.1:+4193860 | None:intergenic |
ACTTTGTAGTTAGATCCAGC+AGG | 0.625794 | 5.1:+4190444 | None:intergenic |
TATTAACGGACAGTGCCCTA+AGG | 0.626097 | 5.1:-4190643 | MS.gene015555:CDS |
CAAACAGGTGATTGCACCGG+TGG | 0.628067 | 5.1:-4190834 | MS.gene015555:intron |
ACTAATGGCCAAGGAAGCTG+TGG | 0.677244 | 5.1:-4190555 | MS.gene015555:CDS |
ATACACATTTCAATACACAC+TGG | 0.687621 | 5.1:+4190371 | None:intergenic |
AGAGGTTCCATGTTTGACCG+CGG | 0.689871 | 5.1:+4193763 | None:intergenic |
ACCCCAAATACGAGCCATGG+CGG | 0.699584 | 5.1:+4193725 | None:intergenic |
TCAATATGAGGAGCTCCAAG+AGG | 0.715579 | 5.1:+4190411 | None:intergenic |
CGGTACCAGGATTAACCCAG+AGG | 0.716660 | 5.1:+4193745 | None:intergenic |
AAGGAATTGAGGACTCAAGG+TGG | 0.730754 | 5.1:-4190624 | MS.gene015555:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTCTTTTACTATAAATAT+AGG | - | chr5.1:4190839-4190858 | MS.gene015555:intron | 15.0% |
!!! | ATTTTTCAGAAACGTATTTT+TGG | - | chr5.1:4190790-4190809 | MS.gene015555:CDS | 20.0% |
!!! | CAGATTTGTTACAATTTTAT+GGG | - | chr5.1:4190815-4190834 | MS.gene015555:CDS | 20.0% |
!!! | TTATTTCTCAAGGTTTTTTA+AGG | - | chr5.1:4193763-4193782 | MS.gene015555:CDS | 20.0% |
!!! | TTTTTCAGAAACGTATTTTT+GGG | - | chr5.1:4190791-4190810 | MS.gene015555:CDS | 20.0% |
! | AAAAAACCTTGAGAAATAAG+TGG | + | chr5.1:4193762-4193781 | None:intergenic | 25.0% |
! | AAAAACCTTGAGAAATAAGT+GGG | + | chr5.1:4193761-4193780 | None:intergenic | 25.0% |
! | AATGAATATTGTTGCACTAA+TGG | - | chr5.1:4193719-4193738 | MS.gene015555:CDS | 25.0% |
! | ATTAGTGCAACAATATTCAT+TGG | + | chr5.1:4193720-4193739 | None:intergenic | 25.0% |
! | CCATAAAATTGTAACAAATC+TGG | + | chr5.1:4190817-4190836 | None:intergenic | 25.0% |
! | GTTACAAAAGAGATTTCAAT+GGG | + | chr5.1:4191083-4191102 | None:intergenic | 25.0% |
! | TATCAAAATAGTCTGATACA+AGG | + | chr5.1:4190865-4190884 | None:intergenic | 25.0% |
! | TTTGTATATGACAAAGTCTT+TGG | - | chr5.1:4191644-4191663 | MS.gene015555:intron | 25.0% |
!!! | ACTATTTTGATAGAGATAGA+GGG | - | chr5.1:4190873-4190892 | MS.gene015555:intron | 25.0% |
!!! | ATAAGTAAAGTTGTTGCTTT+AGG | + | chr5.1:4191683-4191702 | None:intergenic | 25.0% |
!!! | CCAGATTTGTTACAATTTTA+TGG | - | chr5.1:4190814-4190833 | MS.gene015555:CDS | 25.0% |
AAAGGATAATCAAGTACCAT+GGG | - | chr5.1:4191360-4191379 | MS.gene015555:intron | 30.0% | |
ACAACCAAAATCAAAGTGTA+TGG | + | chr5.1:4191248-4191267 | None:intergenic | 30.0% | |
ACAACTTTACTTATTCAGGA+TGG | - | chr5.1:4191689-4191708 | MS.gene015555:intron | 30.0% | |
ACCTTAATCTCTTCAATCAT+CGG | + | chr5.1:4192606-4192625 | None:intergenic | 30.0% | |
AGAAATCTTGATTTCCGAAT+TGG | + | chr5.1:4193538-4193557 | None:intergenic | 30.0% | |
AGCAACAACTTTACTTATTC+AGG | - | chr5.1:4191685-4191704 | MS.gene015555:intron | 30.0% | |
CGTTACAAAAGAGATTTCAA+TGG | + | chr5.1:4191084-4191103 | None:intergenic | 30.0% | |
CTAAAATTCCTTGAGTAGTT+TGG | - | chr5.1:4192548-4192567 | MS.gene015555:intron | 30.0% | |
GAATATGCGTTAAACCAATT+CGG | - | chr5.1:4193521-4193540 | MS.gene015555:intron | 30.0% | |
TAACGTTACTCATCATATAG+TGG | - | chr5.1:4191099-4191118 | MS.gene015555:intron | 30.0% | |
TAAGAATACTCATGATCTAC+CGG | - | chr5.1:4191930-4191949 | MS.gene015555:intron | 30.0% | |
TTGTGAAAGTGACTCAAAAT+TGG | - | chr5.1:4190612-4190631 | MS.gene015555:CDS | 30.0% | |
TTTGTATAGAGTTTGTCTCT+TGG | - | chr5.1:4190937-4190956 | MS.gene015555:intron | 30.0% | |
! | CAAACTACTCAAGGAATTTT+AGG | + | chr5.1:4192550-4192569 | None:intergenic | 30.0% |
! | CAACAAAATCATTGGTGATT+TGG | - | chr5.1:4191749-4191768 | MS.gene015555:intron | 30.0% |
! | CTTTCAGCAAACATCAATTT+TGG | + | chr5.1:4190648-4190667 | None:intergenic | 30.0% |
! | GAATTGGTTTAACGCATATT+CGG | + | chr5.1:4193522-4193541 | None:intergenic | 30.0% |
! | TGGTCTTAAAAACTGTACAA+GGG | + | chr5.1:4193700-4193719 | None:intergenic | 30.0% |
! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr5.1:4190655-4190674 | MS.gene015555:CDS | 30.0% |
! | TTACTCATCATATAGTGGAA+CGG | - | chr5.1:4191104-4191123 | MS.gene015555:intron | 30.0% |
!! | TGTTCCATACACTTTGATTT+TGG | - | chr5.1:4191241-4191260 | MS.gene015555:intron | 30.0% |
!! | TTGGTCTTAAAAACTGTACA+AGG | + | chr5.1:4193701-4193720 | None:intergenic | 30.0% |
!!! | CTATTTTGATAGAGATAGAG+GGG | - | chr5.1:4190874-4190893 | MS.gene015555:intron | 30.0% |
!!! | GACTATTTTGATAGAGATAG+AGG | - | chr5.1:4190872-4190891 | MS.gene015555:intron | 30.0% |
!!! | TATTTTGATAGAGATAGAGG+GGG | - | chr5.1:4190875-4190894 | MS.gene015555:intron | 30.0% |
!!! | TCTCAAGGTTTTTTAAGGAT+AGG | - | chr5.1:4193768-4193787 | MS.gene015555:CDS | 30.0% |
AAAATAACAGCACGCGAAAT+CGG | + | chr5.1:4190775-4190794 | None:intergenic | 35.0% | |
AAGGGATTTCTTCATGAAGA+CGG | - | chr5.1:4192096-4192115 | MS.gene015555:intron | 35.0% | |
AATCCTAATAGTGTTTCCCA+AGG | + | chr5.1:4190994-4191013 | None:intergenic | 35.0% | |
AATGGGCATCATCACTAATT+TGG | - | chr5.1:4192691-4192710 | MS.gene015555:intron | 35.0% | |
ACCAATAACAACTTGATGTG+TGG | + | chr5.1:4191287-4191306 | None:intergenic | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | - | chr5.1:4191002-4191021 | MS.gene015555:intron | 35.0% | |
AGAAAACAACAGCGAGAAAA+AGG | + | chr5.1:4191202-4191221 | None:intergenic | 35.0% | |
AGAAAGGCAACAACAAAACT+AGG | - | chr5.1:4190913-4190932 | MS.gene015555:intron | 35.0% | |
AGGTTGAAGAATGTATAGCA+CGG | - | chr5.1:4192131-4192150 | MS.gene015555:intron | 35.0% | |
AGTGACTCAAAATTGGAGTT+TGG | - | chr5.1:4190619-4190638 | MS.gene015555:CDS | 35.0% | |
ATGGATTTCTTCCCTCTTAA+TGG | - | chr5.1:4193593-4193612 | MS.gene015555:intron | 35.0% | |
ATTGTTGACGATCTCAAAGT+TGG | + | chr5.1:4190453-4190472 | None:intergenic | 35.0% | |
CAAACTACACTAGGAATTTC+AGG | + | chr5.1:4192454-4192473 | None:intergenic | 35.0% | |
CAAAGGATAATCAAGTACCA+TGG | - | chr5.1:4191359-4191378 | MS.gene015555:intron | 35.0% | |
CTGAAATTCCTAGTGTAGTT+TGG | - | chr5.1:4192452-4192471 | MS.gene015555:intron | 35.0% | |
GAAAGGCAACAACAAAACTA+GGG | - | chr5.1:4190914-4190933 | MS.gene015555:intron | 35.0% | |
GAATTACCCTAAAAGTCCAA+GGG | - | chr5.1:4192160-4192179 | MS.gene015555:intron | 35.0% | |
GAGATTAAGGTGTAAACTTG+TGG | - | chr5.1:4192615-4192634 | MS.gene015555:intron | 35.0% | |
GGTAAAGTTAAAGACTGTCA+TGG | - | chr5.1:4191710-4191729 | MS.gene015555:intron | 35.0% | |
GTGGAGTTCAACAAAATCAT+TGG | - | chr5.1:4191741-4191760 | MS.gene015555:intron | 35.0% | |
TAACCCAAAATCGTTATCTC+CGG | + | chr5.1:4191412-4191431 | None:intergenic | 35.0% | |
TAAGAGGGAAGAAATCCATT+GGG | + | chr5.1:4193592-4193611 | None:intergenic | 35.0% | |
TATGACATCCACCATTAAGA+GGG | + | chr5.1:4193607-4193626 | None:intergenic | 35.0% | |
TCCGATGATTGAAGAGATTA+AGG | - | chr5.1:4192602-4192621 | MS.gene015555:intron | 35.0% | |
TGGGATATTGAGAAGTTTAC+CGG | - | chr5.1:4191390-4191409 | MS.gene015555:intron | 35.0% | |
TTAAACACTCAACATCAACC+TGG | - | chr5.1:4191896-4191915 | MS.gene015555:intron | 35.0% | |
TTAAGAGGGAAGAAATCCAT+TGG | + | chr5.1:4193593-4193612 | None:intergenic | 35.0% | |
TTATGACATCCACCATTAAG+AGG | + | chr5.1:4193608-4193627 | None:intergenic | 35.0% | |
TTTAGTGGCATCTCAATATG+AGG | + | chr5.1:4193893-4193912 | None:intergenic | 35.0% | |
! | AAAGTGTGAGAAAGCTTTGA+AGG | - | chr5.1:4191467-4191486 | MS.gene015555:intron | 35.0% |
! | GTTTTCTGTTCGGGAAAAAT+CGG | - | chr5.1:4190725-4190744 | MS.gene015555:CDS | 35.0% |
! | TACTTGTTGGATCATCTTGA+GGG | + | chr5.1:4193814-4193833 | None:intergenic | 35.0% |
! | TCATCACTAATTTGGAGTCA+AGG | - | chr5.1:4192699-4192718 | MS.gene015555:intron | 35.0% |
! | TCCACACATCAAGTTGTTAT+TGG | - | chr5.1:4191283-4191302 | MS.gene015555:intron | 35.0% |
! | TGGATTACTCTAAAAGCCAA+GGG | - | chr5.1:4192350-4192369 | MS.gene015555:intron | 35.0% |
! | TTACCGGAGATAACGATTTT+GGG | - | chr5.1:4191406-4191425 | MS.gene015555:intron | 35.0% |
! | TTTACCGGAGATAACGATTT+TGG | - | chr5.1:4191405-4191424 | MS.gene015555:intron | 35.0% |
! | TTTGAAGGTTGATTCACCTT+GGG | - | chr5.1:4190975-4190994 | MS.gene015555:intron | 35.0% |
!! | AAAGTTGTTTTCTGTCCTCT+TGG | - | chr5.1:4193863-4193882 | MS.gene015555:CDS | 35.0% |
!! | AAGAATTTGTTGACCCAGTT+CGG | + | chr5.1:4191166-4191185 | None:intergenic | 35.0% |
!! | AAGTGTGAGAAAGCTTTGAA+GGG | - | chr5.1:4191468-4191487 | MS.gene015555:intron | 35.0% |
!! | AGCAAGGTGTTGATGTTAAA+TGG | - | chr5.1:4192673-4192692 | MS.gene015555:intron | 35.0% |
!! | GCAAGGTGTTGATGTTAAAT+GGG | - | chr5.1:4192674-4192693 | MS.gene015555:intron | 35.0% |
!!! | AGTTTTGAGAGAAGCAACAA+AGG | - | chr5.1:4191584-4191603 | MS.gene015555:intron | 35.0% |
!!! | GAGATAACGATTTTGGGTTA+TGG | - | chr5.1:4191412-4191431 | MS.gene015555:intron | 35.0% |
!!! | TAACGATTTTGGGTTATGGA+AGG | - | chr5.1:4191416-4191435 | MS.gene015555:intron | 35.0% |
!!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr5.1:4191207-4191226 | MS.gene015555:intron | 35.0% |
AACACCATCAAAGTTGCAAC+CGG | + | chr5.1:4190594-4190613 | None:intergenic | 40.0% | |
AAGGTGATGTTTCTCACCTT+GGG | - | chr5.1:4191835-4191854 | MS.gene015555:intron | 40.0% | |
AAGTAGATCTTCAAGGAAGC+GGG | - | chr5.1:4192384-4192403 | MS.gene015555:intron | 40.0% | |
ACTTTGTAGTTAGATCCAGC+AGG | + | chr5.1:4193848-4193867 | None:intergenic | 40.0% | |
AGGATTGAGTCTCTTGGTTA+CGG | - | chr5.1:4191008-4191027 | MS.gene015555:intron | 40.0% | |
AGGTTCAAGGAAGACATAGT+GGG | - | chr5.1:4191962-4191981 | MS.gene015555:intron | 40.0% | |
AGTTGCACTGCCGATATTAA+CGG | - | chr5.1:4193632-4193651 | MS.gene015555:intron | 40.0% | |
ATGGAAGGTAAAGATGGAAG+CGG | - | chr5.1:4191431-4191450 | MS.gene015555:intron | 40.0% | |
ATTCGGCTAATGTGTTTGGT+GGG | + | chr5.1:4193505-4193524 | None:intergenic | 40.0% | |
CAACAAACACTAGGGTTTGA+AGG | - | chr5.1:4190960-4190979 | MS.gene015555:intron | 40.0% | |
CAAGTAGATCTTCAAGGAAG+CGG | - | chr5.1:4192383-4192402 | MS.gene015555:intron | 40.0% | |
CCTAGTGTAGTTTGGATACA+AGG | - | chr5.1:4192460-4192479 | MS.gene015555:intron | 40.0% | |
CCTTGTATCCAAACTACACT+AGG | + | chr5.1:4192463-4192482 | None:intergenic | 40.0% | |
CTTGAGTCCTCAATTCCTTA+GGG | + | chr5.1:4193664-4193683 | None:intergenic | 40.0% | |
GACTCAAAATTGGAGTTTGG+AGG | - | chr5.1:4190622-4190641 | MS.gene015555:CDS | 40.0% | |
GATTTCTTCATGAAGACGGA+AGG | - | chr5.1:4192100-4192119 | MS.gene015555:intron | 40.0% | |
GATTTCTTCCCTCTTAATGG+TGG | - | chr5.1:4193596-4193615 | MS.gene015555:intron | 40.0% | |
GCATATTCGGCTAATGTGTT+TGG | + | chr5.1:4193509-4193528 | None:intergenic | 40.0% | |
GCTATACATTCTTCAACCTC+CGG | + | chr5.1:4192130-4192149 | None:intergenic | 40.0% | |
GCTGAAACAAGGGTTTAGAA+AGG | - | chr5.1:4190897-4190916 | MS.gene015555:intron | 40.0% | |
GGAATTACCCTAAAAGTCCA+AGG | - | chr5.1:4192159-4192178 | MS.gene015555:intron | 40.0% | |
GGTCCAAATTGACCTAGTAT+GGG | + | chr5.1:4193243-4193262 | None:intergenic | 40.0% | |
GTCCAAATTGACCTAGTATG+GGG | + | chr5.1:4193242-4193261 | None:intergenic | 40.0% | |
TATTCGGCTAATGTGTTTGG+TGG | + | chr5.1:4193506-4193525 | None:intergenic | 40.0% | |
TATTGTTGCACTAATGGCCA+AGG | - | chr5.1:4193725-4193744 | MS.gene015555:CDS | 40.0% | |
TCACCTTGGGAAACACTATT+AGG | - | chr5.1:4190988-4191007 | MS.gene015555:intron | 40.0% | |
TCCAAATTGACCTAGTATGG+GGG | + | chr5.1:4193241-4193260 | None:intergenic | 40.0% | |
TCTAAAAGCCAAGGGTGATT+GGG | - | chr5.1:4192358-4192377 | MS.gene015555:intron | 40.0% | |
TCTCTTGGCAACAAACACTA+GGG | - | chr5.1:4190952-4190971 | MS.gene015555:intron | 40.0% | |
TGGACACAAGGATCTTCAAA+GGG | - | chr5.1:4192568-4192587 | MS.gene015555:intron | 40.0% | |
TGGGAACAAGTAGATCTTCA+AGG | - | chr5.1:4192377-4192396 | MS.gene015555:intron | 40.0% | |
TGGGTTATGGAAGGTAAAGA+TGG | - | chr5.1:4191425-4191444 | MS.gene015555:intron | 40.0% | |
TGTAAACTTGTGGAGCTACT+TGG | - | chr5.1:4192625-4192644 | MS.gene015555:intron | 40.0% | |
TGTCTCGTATTGAAGAGGTA+TGG | - | chr5.1:4192220-4192239 | MS.gene015555:intron | 40.0% | |
TTCATCGAATCCGCAACAAT+TGG | - | chr5.1:4191315-4191334 | MS.gene015555:intron | 40.0% | |
TTGGACACAAGGATCTTCAA+AGG | - | chr5.1:4192567-4192586 | MS.gene015555:intron | 40.0% | |
! | CAATCACCCTTGGACTTTTA+GGG | + | chr5.1:4192169-4192188 | None:intergenic | 40.0% |
! | GTACTCATTTGCTAGTTGAG+AGG | - | chr5.1:4191987-4192006 | MS.gene015555:intron | 40.0% |
! | GTACTTGTTGGATCATCTTG+AGG | + | chr5.1:4193815-4193834 | None:intergenic | 40.0% |
! | GTGGATTACTCTAAAAGCCA+AGG | - | chr5.1:4192349-4192368 | MS.gene015555:intron | 40.0% |
! | GTTTGAAGGTTGATTCACCT+TGG | - | chr5.1:4190974-4190993 | MS.gene015555:intron | 40.0% |
! | TCACTAATTTGGAGTCAAGG+TGG | - | chr5.1:4192702-4192721 | MS.gene015555:intron | 40.0% |
! | TCATCATATAGTGGAACGGA+GGG | - | chr5.1:4191108-4191127 | MS.gene015555:intron | 40.0% |
! | TCATTTGCTAGTTGAGAGGT+TGG | - | chr5.1:4191991-4192010 | MS.gene015555:intron | 40.0% |
! | TGGTGATTTGGAGAACATTG+AGG | - | chr5.1:4191761-4191780 | MS.gene015555:intron | 40.0% |
! | TTGCTGAAAGTACAAATCGG+TGG | - | chr5.1:4190658-4190677 | MS.gene015555:CDS | 40.0% |
!! | CTTTTGGGAGGTTTTCTGTT+CGG | - | chr5.1:4190715-4190734 | MS.gene015555:CDS | 40.0% |
!! | GGACAAGTGAAAGTACTTGT+TGG | + | chr5.1:4193827-4193846 | None:intergenic | 40.0% |
!! | TTTTGGGAGGTTTTCTGTTC+GGG | - | chr5.1:4190716-4190735 | MS.gene015555:CDS | 40.0% |
AAGGAATTGAGGACTCAAGG+TGG | - | chr5.1:4193665-4193684 | MS.gene015555:intron | 45.0% | |
AAGGTGATCTTCAAGGAAGC+GGG | - | chr5.1:4192194-4192213 | MS.gene015555:intron | 45.0% | |
AAGTACCATGGGTTCGAAGT+GGG | - | chr5.1:4191371-4191390 | MS.gene015555:intron | 45.0% | |
AATATCCCACTTCGAACCCA+TGG | + | chr5.1:4191379-4191398 | None:intergenic | 45.0% | |
AATGTCTTCCGCCTTCTTGA+AGG | + | chr5.1:4192298-4192317 | None:intergenic | 45.0% | |
ACAACTTGATGTGTGGAGCA+AGG | + | chr5.1:4191280-4191299 | None:intergenic | 45.0% | |
ACAATTGCCCTTACACCGTT+TGG | - | chr5.1:4190468-4190487 | MS.gene015555:CDS | 45.0% | |
ACCTTAACCTCTTCAGCCAT+CGG | + | chr5.1:4192510-4192529 | None:intergenic | 45.0% | |
AGAACATTGAGGTGCGTCTT+GGG | - | chr5.1:4191772-4191791 | MS.gene015555:intron | 45.0% | |
AGAATGTATAGCACGGCTTG+TGG | - | chr5.1:4192138-4192157 | MS.gene015555:intron | 45.0% | |
AGCAACAAAGGATACAACCG+CGG | - | chr5.1:4191596-4191615 | MS.gene015555:intron | 45.0% | |
AGGTCAATTTGGACCGAACT+GGG | - | chr5.1:4191150-4191169 | MS.gene015555:intron | 45.0% | |
AGGTGATGTTTCTCACCTTG+GGG | - | chr5.1:4191836-4191855 | MS.gene015555:intron | 45.0% | |
AGTACTTTCACTTGTCCTGC+TGG | - | chr5.1:4193830-4193849 | MS.gene015555:CDS | 45.0% | |
ATGTCTTCCGCCTTCTTGAA+GGG | + | chr5.1:4192297-4192316 | None:intergenic | 45.0% | |
CAACTTGATGTGTGGAGCAA+GGG | + | chr5.1:4191279-4191298 | None:intergenic | 45.0% | |
CAAGGTGATCTTCAAGGAAG+CGG | - | chr5.1:4192193-4192212 | MS.gene015555:intron | 45.0% | |
CAATTGCCCTTACACCGTTT+GGG | - | chr5.1:4190469-4190488 | MS.gene015555:CDS | 45.0% | |
CCTAAAACTCCTAGCGTAGT+TGG | - | chr5.1:4192261-4192280 | MS.gene015555:intron | 45.0% | |
CCTAAAAGTCCAAGGGTGAT+TGG | - | chr5.1:4192167-4192186 | MS.gene015555:intron | 45.0% | |
CCTAAGGAATTGAGGACTCA+AGG | - | chr5.1:4193662-4193681 | MS.gene015555:intron | 45.0% | |
CCTTGAGTAGTTTGGACACA+AGG | - | chr5.1:4192556-4192575 | MS.gene015555:intron | 45.0% | |
CCTTGAGTCCTCAATTCCTT+AGG | + | chr5.1:4193665-4193684 | None:intergenic | 45.0% | |
CCTTGTGTCCAAACTACTCA+AGG | + | chr5.1:4192559-4192578 | None:intergenic | 45.0% | |
CGAACAGAAAACCTCCCAAA+AGG | + | chr5.1:4190717-4190736 | None:intergenic | 45.0% | |
CGATGGTTTCAACATCCCAA+TGG | - | chr5.1:4193574-4193593 | MS.gene015555:intron | 45.0% | |
CGGTCCAAATTGACCTAGTA+TGG | + | chr5.1:4193244-4193263 | None:intergenic | 45.0% | |
CTCTCAAAACTTTATCCCCG+AGG | + | chr5.1:4191575-4191594 | None:intergenic | 45.0% | |
GAAGGTGATGTTTCTCACCT+TGG | - | chr5.1:4191834-4191853 | MS.gene015555:intron | 45.0% | |
GAGGTTAAGGTGTGTACTTG+TGG | - | chr5.1:4192519-4192538 | MS.gene015555:intron | 45.0% | |
GAGGTTCAAGGAAGACATAG+TGG | - | chr5.1:4191961-4191980 | MS.gene015555:intron | 45.0% | |
GCTGGGATTTGGGTAGAATT+AGG | - | chr5.1:4191037-4191056 | MS.gene015555:intron | 45.0% | |
GGACACAAGGATCTTCAAAG+GGG | - | chr5.1:4192569-4192588 | MS.gene015555:intron | 45.0% | |
GGAGATGTCTCGTATTGAAG+AGG | - | chr5.1:4192215-4192234 | MS.gene015555:intron | 45.0% | |
GGATACAAGGATCTTCGAGA+AGG | - | chr5.1:4192473-4192492 | MS.gene015555:intron | 45.0% | |
GGATTGAGTCTCTTGGTTAC+GGG | - | chr5.1:4191009-4191028 | MS.gene015555:intron | 45.0% | |
GGATTTGGGTAGAATTAGGC+GGG | - | chr5.1:4191041-4191060 | MS.gene015555:intron | 45.0% | |
GGGATTTGGGTAGAATTAGG+CGG | - | chr5.1:4191040-4191059 | MS.gene015555:intron | 45.0% | |
GGTCCAAATTGACCTAGTCT+GGG | + | chr5.1:4191145-4191164 | None:intergenic | 45.0% | |
GTCCAAATTGACCTAGTCTG+GGG | + | chr5.1:4191144-4191163 | None:intergenic | 45.0% | |
GTCTCTTGGCAACAAACACT+AGG | - | chr5.1:4190951-4190970 | MS.gene015555:intron | 45.0% | |
TACAAGGATCTTCGAGAAGG+CGG | - | chr5.1:4192476-4192495 | MS.gene015555:intron | 45.0% | |
TACGACATCTCACTTGTCGA+TGG | - | chr5.1:4193557-4193576 | MS.gene015555:intron | 45.0% | |
TACTTGTTCCCAATCACCCT+TGG | + | chr5.1:4192369-4192388 | None:intergenic | 45.0% | |
TAGGTCAATTTGGACCGAAC+TGG | - | chr5.1:4191149-4191168 | MS.gene015555:intron | 45.0% | |
TATGCTCTAGTGGTGAGCAA+GGG | - | chr5.1:4192078-4192097 | MS.gene015555:intron | 45.0% | |
TCAAAGTTGGCTGCTTGTGA+AGG | + | chr5.1:4190440-4190459 | None:intergenic | 45.0% | |
TCAATATGAGGAGCTCCAAG+AGG | + | chr5.1:4193881-4193900 | None:intergenic | 45.0% | |
TCCAAATTGACCTAGTCTGG+GGG | + | chr5.1:4191143-4191162 | None:intergenic | 45.0% | |
TCCCAAAAGGCAGCCAAAAT+CGG | + | chr5.1:4190704-4190723 | None:intergenic | 45.0% | |
TCCCCCATACTAGGTCAATT+TGG | - | chr5.1:4193237-4193256 | MS.gene015555:intron | 45.0% | |
TGCAATCACCTGTTTGGCAA+CGG | + | chr5.1:4193451-4193470 | None:intergenic | 45.0% | |
TGGATGCAAGGTGATCTTCA+AGG | - | chr5.1:4192187-4192206 | MS.gene015555:intron | 45.0% | |
TTAGGTGGAGTTGAACACAC+CGG | - | chr5.1:4192024-4192043 | MS.gene015555:intron | 45.0% | |
TTCATCGAATCCGCAACAGA+TGG | - | chr5.1:4193413-4193432 | MS.gene015555:intron | 45.0% | |
TTCTGTTCGGGAAAAATCGG+TGG | - | chr5.1:4190728-4190747 | MS.gene015555:CDS | 45.0% | |
! | AGAGGTATGGTGAATGCTTG+TGG | - | chr5.1:4192233-4192252 | MS.gene015555:intron | 45.0% |
! | CCAACTACGCTAGGAGTTTT+AGG | + | chr5.1:4192264-4192283 | None:intergenic | 45.0% |
! | CCAATCACCCTTGGACTTTT+AGG | + | chr5.1:4192170-4192189 | None:intergenic | 45.0% |
! | CTCATCATATAGTGGAACGG+AGG | - | chr5.1:4191107-4191126 | MS.gene015555:intron | 45.0% |
! | CTCTAAAAGCCAAGGGTGAT+TGG | - | chr5.1:4192357-4192376 | MS.gene015555:intron | 45.0% |
! | GTGGACCCACTTATTTCTCA+AGG | - | chr5.1:4193753-4193772 | MS.gene015555:CDS | 45.0% |
! | TACACACTGGTCTGGTTTAG+TGG | + | chr5.1:4193908-4193927 | None:intergenic | 45.0% |
! | TACTCATGATCTACCGGTTG+AGG | - | chr5.1:4191936-4191955 | MS.gene015555:intron | 45.0% |
! | TATTAACGGACAGTGCCCTA+AGG | - | chr5.1:4193646-4193665 | MS.gene015555:intron | 45.0% |
! | TGACAAAGTCTTTGGCTCGT+CGG | - | chr5.1:4191652-4191671 | MS.gene015555:intron | 45.0% |
!! | AGGGCACTGTCCGTTAATAT+CGG | + | chr5.1:4193645-4193664 | None:intergenic | 45.0% |
!! | GAGAAAGCTTTGAAGGGTGA+AGG | - | chr5.1:4191474-4191493 | MS.gene015555:intron | 45.0% |
!! | TGGACTCCAATGTACTGGTT+GGG | - | chr5.1:4193475-4193494 | MS.gene015555:intron | 45.0% |
!! | TGGTGCTGTTTAGAGGATGA+AGG | - | chr5.1:4191816-4191835 | MS.gene015555:intron | 45.0% |
AAGCAAGGGAAAGAGCAGCA+AGG | - | chr5.1:4192657-4192676 | MS.gene015555:intron | 50.0% | |
AAGGAGTGAGGGTGAGTAGT+AGG | + | chr5.1:4190421-4190440 | None:intergenic | 50.0% | |
ACCAGTACATTGGAGTCCAC+CGG | + | chr5.1:4193474-4193493 | None:intergenic | 50.0% | |
ACCTTGCATCCAATCACCCT+TGG | + | chr5.1:4192179-4192198 | None:intergenic | 50.0% | |
ACTAATGGCCAAGGAAGCTG+TGG | - | chr5.1:4193734-4193753 | MS.gene015555:CDS | 50.0% | |
ACTGCAAGGACCCTTCAAGA+AGG | - | chr5.1:4192284-4192303 | MS.gene015555:intron | 50.0% | |
AGAAGGCGGAAGACATTCTG+AGG | - | chr5.1:4192301-4192320 | MS.gene015555:intron | 50.0% | |
AGACATTCCGATGGCTGAAG+AGG | - | chr5.1:4192500-4192519 | MS.gene015555:intron | 50.0% | |
AGAGGTTCCATGTTTGACCG+CGG | + | chr5.1:4190529-4190548 | None:intergenic | 50.0% | |
AGATAGAGGGGGCTGAAACA+AGG | - | chr5.1:4190886-4190905 | MS.gene015555:intron | 50.0% | |
AGGAGTGAGGGTGAGTAGTA+GGG | + | chr5.1:4190420-4190439 | None:intergenic | 50.0% | |
AGTCTCTTGGTTACGGGAAG+AGG | - | chr5.1:4191015-4191034 | MS.gene015555:intron | 50.0% | |
ATCCTTTGACCTTTGCCCCA+CGG | + | chr5.1:4191347-4191366 | None:intergenic | 50.0% | |
CAAGTACCATGGGTTCGAAG+TGG | - | chr5.1:4191370-4191389 | MS.gene015555:intron | 50.0% | |
CACAAGGATCTTCAAAGGGG+CGG | - | chr5.1:4192572-4192591 | MS.gene015555:intron | 50.0% | |
CACTCAACATCAACCTGGAG+AGG | - | chr5.1:4191901-4191920 | MS.gene015555:intron | 50.0% | |
CGGTCAAACATGGAACCTCT+GGG | - | chr5.1:4190529-4190548 | MS.gene015555:CDS | 50.0% | |
CGGTCCAAATTGACCTAGTC+TGG | + | chr5.1:4191146-4191165 | None:intergenic | 50.0% | |
CTATGCTCTAGTGGTGAGCA+AGG | - | chr5.1:4192077-4192096 | MS.gene015555:intron | 50.0% | |
CTCCATAGTCGTACCATTCC+CGG | + | chr5.1:4192046-4192065 | None:intergenic | 50.0% | |
GAACATTGAGGTGCGTCTTG+GGG | - | chr5.1:4191773-4191792 | MS.gene015555:intron | 50.0% | |
GAAGGCGGAAGACATTCTGA+GGG | - | chr5.1:4192302-4192321 | MS.gene015555:intron | 50.0% | |
GAAGGGTGAAGGTTCGTTAC+CGG | - | chr5.1:4191485-4191504 | MS.gene015555:intron | 50.0% | |
GACAGTGCCCTAAGGAATTG+AGG | - | chr5.1:4193654-4193673 | MS.gene015555:intron | 50.0% | |
GACTGTCATGGAGCTACTTG+TGG | - | chr5.1:4191722-4191741 | MS.gene015555:intron | 50.0% | |
GAGAACATTGAGGTGCGTCT+TGG | - | chr5.1:4191771-4191790 | MS.gene015555:intron | 50.0% | |
GAGGTTGGAAGCTCAGCTTT+AGG | - | chr5.1:4192006-4192025 | MS.gene015555:intron | 50.0% | |
GATAGAGGGGGCTGAAACAA+GGG | - | chr5.1:4190887-4190906 | MS.gene015555:intron | 50.0% | |
GGAAAAATCGGTGGCCGATT+GGG | - | chr5.1:4190737-4190756 | MS.gene015555:CDS | 50.0% | |
GGGGTTGAGGTGTATACTTG+TGG | - | chr5.1:4192330-4192349 | MS.gene015555:intron | 50.0% | |
GGTGATGTTTCTCACCTTGG+GGG | - | chr5.1:4191837-4191856 | MS.gene015555:intron | 50.0% | |
GGTGGCCGATTGGGAAAAAT+CGG | - | chr5.1:4190746-4190765 | MS.gene015555:CDS | 50.0% | |
GTACAAATCGGTGGCCGATT+TGG | - | chr5.1:4190667-4190686 | MS.gene015555:CDS | 50.0% | |
GTACGACTATGGAGGACCTT+GGG | - | chr5.1:4192052-4192071 | MS.gene015555:intron | 50.0% | |
TACCGCCATGGCTCGTATTT+GGG | - | chr5.1:4190562-4190581 | MS.gene015555:CDS | 50.0% | |
TAGGTGGAGTTGAACACACC+GGG | - | chr5.1:4192025-4192044 | MS.gene015555:intron | 50.0% | |
TCAACATCAACCTGGAGAGG+CGG | - | chr5.1:4191904-4191923 | MS.gene015555:intron | 50.0% | |
TCCAAGGGTGATTGGATGCA+AGG | - | chr5.1:4192175-4192194 | MS.gene015555:intron | 50.0% | |
TCCCCCAGACTAGGTCAATT+TGG | - | chr5.1:4191139-4191158 | MS.gene015555:intron | 50.0% | |
TCCGATGGCTGAAGAGGTTA+AGG | - | chr5.1:4192506-4192525 | MS.gene015555:intron | 50.0% | |
TGCCAAACAGGTGATTGCAC+CGG | - | chr5.1:4193452-4193471 | MS.gene015555:intron | 50.0% | |
TGGAACCTCTGGGTTAATCC+TGG | - | chr5.1:4190539-4190558 | MS.gene015555:CDS | 50.0% | |
! | AAGACATTCTGAGGGCTGGA+GGG | - | chr5.1:4192310-4192329 | MS.gene015555:intron | 50.0% |
! | AGTGCCATTGTCTTGTGCCT+CGG | - | chr5.1:4191555-4191574 | MS.gene015555:intron | 50.0% |
! | CTTGGTGTAGTGGGAAGCAA+GGG | - | chr5.1:4192643-4192662 | MS.gene015555:intron | 50.0% |
! | GGGAGCATAGTGTGAATGTG+AGG | + | chr5.1:4190400-4190419 | None:intergenic | 50.0% |
! | GTGGACTCCAATGTACTGGT+TGG | - | chr5.1:4193474-4193493 | MS.gene015555:intron | 50.0% |
! | TCATGATCTACCGGTTGAGG+TGG | - | chr5.1:4191939-4191958 | MS.gene015555:intron | 50.0% |
!! | ACTTGGTGTAGTGGGAAGCA+AGG | - | chr5.1:4192642-4192661 | MS.gene015555:intron | 50.0% |
!! | CATGAAGACGGAAGGCATTC+CGG | - | chr5.1:4192108-4192127 | MS.gene015555:intron | 50.0% |
!! | CGGTGGCCGATTTGGAAAAT+CGG | - | chr5.1:4190675-4190694 | MS.gene015555:CDS | 50.0% |
!! | GATGGTGTGGTGCTGTTTAG+AGG | - | chr5.1:4191809-4191828 | MS.gene015555:intron | 50.0% |
!! | GGAAAATCGGTGGCCGATTT+TGG | - | chr5.1:4190688-4190707 | MS.gene015555:CDS | 50.0% |
!! | GGACTCCAATGTACTGGTTG+GGG | - | chr5.1:4193476-4193495 | MS.gene015555:intron | 50.0% |
!! | GTGGAGCTACTTGGTGTAGT+GGG | - | chr5.1:4192634-4192653 | MS.gene015555:intron | 50.0% |
!! | GTTGGAAGCTCAGCTTTAGG+TGG | - | chr5.1:4192009-4192028 | MS.gene015555:intron | 50.0% |
!! | TGGCCGATTTGGAAAATCGG+TGG | - | chr5.1:4190678-4190697 | MS.gene015555:CDS | 50.0% |
!! | TGTGGAGCTACTTGGTGTAG+TGG | - | chr5.1:4192633-4192652 | MS.gene015555:intron | 50.0% |
!!! | CGGCCACCGATTTTCCAAAT+CGG | + | chr5.1:4190684-4190703 | None:intergenic | 50.0% |
!!! | GATTTTGGCTGCCTTTTGGG+AGG | - | chr5.1:4190703-4190722 | MS.gene015555:CDS | 50.0% |
!!! | GCCGATTTTGGCTGCCTTTT+GGG | - | chr5.1:4190700-4190719 | MS.gene015555:CDS | 50.0% |
!!! | GGCCACCGATTTTTCCCAAT+CGG | + | chr5.1:4190754-4190773 | None:intergenic | 50.0% |
AAGTGGGTCCACAGCTTCCT+TGG | + | chr5.1:4193745-4193764 | None:intergenic | 55.0% | |
ACCCCAAATACGAGCCATGG+CGG | + | chr5.1:4190567-4190586 | None:intergenic | 55.0% | |
ACCGCCATGGCTCGTATTTG+GGG | - | chr5.1:4190563-4190582 | MS.gene015555:CDS | 55.0% | |
ACGGGAAGAGGCTGGGATTT+GGG | - | chr5.1:4191027-4191046 | MS.gene015555:intron | 55.0% | |
AGGATCTTCAAAGGGGCGGA+AGG | - | chr5.1:4192576-4192595 | MS.gene015555:intron | 55.0% | |
ATCCCCGAGGCACAAGACAA+TGG | + | chr5.1:4191562-4191581 | None:intergenic | 55.0% | |
ATTCTTACCACCGCCTCTCC+AGG | + | chr5.1:4191917-4191936 | None:intergenic | 55.0% | |
CAAACAGGTGATTGCACCGG+TGG | - | chr5.1:4193455-4193474 | MS.gene015555:intron | 55.0% | |
CACCGGGAATGGTACGACTA+TGG | - | chr5.1:4192041-4192060 | MS.gene015555:intron | 55.0% | |
CACCGGTGCAATCACCTGTT+TGG | + | chr5.1:4193457-4193476 | None:intergenic | 55.0% | |
CAGCTGCCCAAACGGTGTAA+GGG | + | chr5.1:4190478-4190497 | None:intergenic | 55.0% | |
CCACTAGAGCATAGCACCCA+AGG | + | chr5.1:4192071-4192090 | None:intergenic | 55.0% | |
CCTAGCGTAGTTGGACTGCA+AGG | - | chr5.1:4192270-4192289 | MS.gene015555:intron | 55.0% | |
CCTTGAACCTCCACCTCAAC+CGG | + | chr5.1:4191952-4191971 | None:intergenic | 55.0% | |
CCTTGCAGTCCAACTACGCT+AGG | + | chr5.1:4192273-4192292 | None:intergenic | 55.0% | |
CGGGAATGGTACGACTATGG+AGG | - | chr5.1:4192044-4192063 | MS.gene015555:intron | 55.0% | |
CGGTACCAGGATTAACCCAG+AGG | + | chr5.1:4190547-4190566 | None:intergenic | 55.0% | |
CTTGGTTACGGGAAGAGGCT+GGG | - | chr5.1:4191020-4191039 | MS.gene015555:intron | 55.0% | |
CTTTGACCACATCGATGCCG+CGG | + | chr5.1:4191616-4191635 | None:intergenic | 55.0% | |
GAAGGCGGAAGACATTCCGA+TGG | - | chr5.1:4192491-4192510 | MS.gene015555:intron | 55.0% | |
GAATCCGCAACAGATGGCAG+CGG | - | chr5.1:4193419-4193438 | MS.gene015555:intron | 55.0% | |
GCAAGGACCCTTCAAGAAGG+CGG | - | chr5.1:4192287-4192306 | MS.gene015555:intron | 55.0% | |
GCACAAGACAATGGCACTCC+TGG | + | chr5.1:4191553-4191572 | None:intergenic | 55.0% | |
GCGGTCAAACATGGAACCTC+TGG | - | chr5.1:4190528-4190547 | MS.gene015555:CDS | 55.0% | |
GGACACCCCAACCAGTACAT+TGG | + | chr5.1:4193484-4193503 | None:intergenic | 55.0% | |
GGAGTTGAACACACCGGGAA+TGG | - | chr5.1:4192030-4192049 | MS.gene015555:intron | 55.0% | |
GGCCGATTGGGAAAAATCGG+TGG | - | chr5.1:4190749-4190768 | MS.gene015555:CDS | 55.0% | |
GGCTGCTTGTGAAGGAGTGA+GGG | + | chr5.1:4190432-4190451 | None:intergenic | 55.0% | |
GGGAAAAATCGGTGGCCGAT+TGG | - | chr5.1:4190736-4190755 | MS.gene015555:CDS | 55.0% | |
GGTACGACTATGGAGGACCT+TGG | - | chr5.1:4192051-4192070 | MS.gene015555:intron | 55.0% | |
GGTTAATCCTGGTACCGCCA+TGG | - | chr5.1:4190550-4190569 | MS.gene015555:CDS | 55.0% | |
GTACCGCCATGGCTCGTATT+TGG | - | chr5.1:4190561-4190580 | MS.gene015555:CDS | 55.0% | |
TACGGGAAGAGGCTGGGATT+TGG | - | chr5.1:4191026-4191045 | MS.gene015555:intron | 55.0% | |
TCTTGGTTACGGGAAGAGGC+TGG | - | chr5.1:4191019-4191038 | MS.gene015555:intron | 55.0% | |
TGCCATTGTCTTGTGCCTCG+GGG | - | chr5.1:4191557-4191576 | MS.gene015555:intron | 55.0% | |
TGGCTGCTTGTGAAGGAGTG+AGG | + | chr5.1:4190433-4190452 | None:intergenic | 55.0% | |
TTTGACCTTTGCCCCACGGT+GGG | + | chr5.1:4191343-4191362 | None:intergenic | 55.0% | |
! | ACCGGTGGACTCCAATGTAC+TGG | - | chr5.1:4193470-4193489 | MS.gene015555:intron | 55.0% |
! | AGACATTCTGAGGGCTGGAG+GGG | - | chr5.1:4192311-4192330 | MS.gene015555:intron | 55.0% |
! | CCTTGGGTGCTATGCTCTAG+TGG | - | chr5.1:4192068-4192087 | MS.gene015555:intron | 55.0% |
! | GAAGACATTCTGAGGGCTGG+AGG | - | chr5.1:4192309-4192328 | MS.gene015555:intron | 55.0% |
! | GTGCCATTGTCTTGTGCCTC+GGG | - | chr5.1:4191556-4191575 | MS.gene015555:intron | 55.0% |
! | TGATCTACCGGTTGAGGTGG+AGG | - | chr5.1:4191942-4191961 | MS.gene015555:intron | 55.0% |
!! | ATACAACCGCGGCATCGATG+TGG | - | chr5.1:4191607-4191626 | MS.gene015555:intron | 55.0% |
!! | CGCACCGGTTGCAACTTTGA+TGG | - | chr5.1:4190587-4190606 | MS.gene015555:CDS | 55.0% |
!! | GAAGACCGAGATGGTGGACA+AGG | - | chr5.1:4191527-4191546 | MS.gene015555:intron | 55.0% |
!!! | GGCCGATTTTGGCTGCCTTT+TGG | - | chr5.1:4190699-4190718 | MS.gene015555:CDS | 55.0% |
AACAATTGGCGCCCACCGTG+GGG | - | chr5.1:4191329-4191348 | MS.gene015555:intron | 60.0% | |
ACATCAACCTGGAGAGGCGG+TGG | - | chr5.1:4191907-4191926 | MS.gene015555:intron | 60.0% | |
ACCGGTCACCATGACACGAG+CGG | - | chr5.1:4191503-4191522 | MS.gene015555:intron | 60.0% | |
ACGACCGCTGCCATCTGTTG+CGG | + | chr5.1:4193426-4193445 | None:intergenic | 60.0% | |
ACGAGCGGAGAAGACCGAGA+TGG | - | chr5.1:4191518-4191537 | MS.gene015555:intron | 60.0% | |
ACGGTGGGCGCCAATTGTTG+CGG | + | chr5.1:4191328-4191347 | None:intergenic | 60.0% | |
AGCGGAGAAGACCGAGATGG+TGG | - | chr5.1:4191521-4191540 | MS.gene015555:intron | 60.0% | |
ATACGAGCCATGGCGGTACC+AGG | + | chr5.1:4190560-4190579 | None:intergenic | 60.0% | |
ATGTTTGACCGCGGTCGAGG+CGG | + | chr5.1:4190520-4190539 | None:intergenic | 60.0% | |
CAACAATTGGCGCCCACCGT+GGG | - | chr5.1:4191328-4191347 | MS.gene015555:intron | 60.0% | |
CACCGTGGGGCAAAGGTCAA+AGG | - | chr5.1:4191342-4191361 | MS.gene015555:intron | 60.0% | |
CAGACGATCACCGCTCTACC+AGG | + | chr5.1:4191868-4191887 | None:intergenic | 60.0% | |
CCGGTTGAGGTGGAGGTTCA+AGG | - | chr5.1:4191949-4191968 | MS.gene015555:intron | 60.0% | |
CTGGTAGAGCGGTGATCGTC+TGG | - | chr5.1:4191866-4191885 | MS.gene015555:intron | 60.0% | |
CTTTGACCTTTGCCCCACGG+TGG | + | chr5.1:4191344-4191363 | None:intergenic | 60.0% | |
GCAGCTGCCCAAACGGTGTA+AGG | + | chr5.1:4190479-4190498 | None:intergenic | 60.0% | |
GCGACCCCAAATACGAGCCA+TGG | + | chr5.1:4190570-4190589 | None:intergenic | 60.0% | |
GCTGCTCTCTCCCCCATACT+AGG | - | chr5.1:4193228-4193247 | MS.gene015555:intron | 60.0% | |
GGTCTTCTCCGCTCGTGTCA+TGG | + | chr5.1:4191514-4191533 | None:intergenic | 60.0% | |
TCCATGTTTGACCGCGGTCG+AGG | + | chr5.1:4190523-4190542 | None:intergenic | 60.0% | |
TCCGCTCGTGTCATGGTGAC+CGG | + | chr5.1:4191507-4191526 | None:intergenic | 60.0% | |
TCTACCAGGCATCACCCCCA+AGG | + | chr5.1:4191854-4191873 | None:intergenic | 60.0% | |
TGAGGTGCGTCTTGGGGATG+CGG | - | chr5.1:4191779-4191798 | MS.gene015555:intron | 60.0% | |
! | ATGCGGGTGCTCTGATGGTG+TGG | - | chr5.1:4191796-4191815 | MS.gene015555:intron | 60.0% |
! | GCGGAAGACATTCTGAGGGC+TGG | - | chr5.1:4192306-4192325 | MS.gene015555:intron | 60.0% |
! | GCTCGTATTTGGGGTCGCAC+CGG | - | chr5.1:4190572-4190591 | MS.gene015555:CDS | 60.0% |
!! | CCTGGCCTTGTCCACCATCT+CGG | + | chr5.1:4191535-4191554 | None:intergenic | 60.0% |
!! | GAAGACGGAAGGCATTCCGG+AGG | - | chr5.1:4192111-4192130 | MS.gene015555:intron | 60.0% |
!! | TGGGCTAGCAGCTGCCCAAA+CGG | + | chr5.1:4190486-4190505 | None:intergenic | 60.0% |
CTCACCTTGGGGGTGATGCC+TGG | - | chr5.1:4191847-4191866 | MS.gene015555:intron | 65.0% | |
GAGGTGCGTCTTGGGGATGC+GGG | - | chr5.1:4191780-4191799 | MS.gene015555:intron | 65.0% | |
GCAACAATTGGCGCCCACCG+TGG | - | chr5.1:4191327-4191346 | MS.gene015555:intron | 65.0% | |
GCAACAGATGGCAGCGGTCG+TGG | - | chr5.1:4193425-4193444 | MS.gene015555:intron | 65.0% | |
GCCTCGACCGCGGTCAAACA+TGG | - | chr5.1:4190519-4190538 | MS.gene015555:CDS | 65.0% | |
GCTGCTCTCTCCCCCAGACT+AGG | - | chr5.1:4191130-4191149 | MS.gene015555:intron | 65.0% | |
GGGGGTGATGCCTGGTAGAG+CGG | - | chr5.1:4191855-4191874 | MS.gene015555:intron | 65.0% | |
GGTCGTGGCCGTTGCCAAAC+AGG | - | chr5.1:4193440-4193459 | MS.gene015555:intron | 65.0% | |
GTTTGGGCAGCTGCTAGCCC+AGG | - | chr5.1:4190485-4190504 | MS.gene015555:CDS | 65.0% | |
TCTGAGGGCTGGAGGGGTTG+AGG | - | chr5.1:4192317-4192336 | MS.gene015555:intron | 65.0% | |
TGGGGATGCGGGTGCTCTGA+TGG | - | chr5.1:4191791-4191810 | MS.gene015555:intron | 65.0% | |
!! | CCGAGATGGTGGACAAGGCC+AGG | - | chr5.1:4191532-4191551 | MS.gene015555:intron | 65.0% |
TGGGCAGCTGCTAGCCCAGG+CGG | - | chr5.1:4190488-4190507 | MS.gene015555:CDS | 70.0% | |
GCAGCTGCTAGCCCAGGCGG+TGG | - | chr5.1:4190491-4190510 | MS.gene015555:CDS | 75.0% | |
TGGCGCCCACCGTGGGGCAA+AGG | - | chr5.1:4191335-4191354 | MS.gene015555:intron | 75.0% | |
! | CGAGGCGGCGACCACCGCCT+GGG | + | chr5.1:4190505-4190524 | None:intergenic | 80.0% |
! | GGTGGTCGCCGCCTCGACCG+CGG | - | chr5.1:4190509-4190528 | MS.gene015555:CDS | 80.0% |
! | TCGAGGCGGCGACCACCGCC+TGG | + | chr5.1:4190506-4190525 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 4190380 | 4193931 | 4190380 | ID=MS.gene015555 |
chr5.1 | mRNA | 4190380 | 4193931 | 4190380 | ID=MS.gene015555.t1;Parent=MS.gene015555 |
chr5.1 | exon | 4193718 | 4193931 | 4193718 | ID=MS.gene015555.t1.exon1;Parent=MS.gene015555.t1 |
chr5.1 | CDS | 4193718 | 4193931 | 4193718 | ID=cds.MS.gene015555.t1;Parent=MS.gene015555.t1 |
chr5.1 | exon | 4190380 | 4190849 | 4190380 | ID=MS.gene015555.t1.exon2;Parent=MS.gene015555.t1 |
chr5.1 | CDS | 4190380 | 4190849 | 4190380 | ID=cds.MS.gene015555.t1;Parent=MS.gene015555.t1 |
Gene Sequence |
Protein sequence |