Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048789.t1 | XP_003630534.1 | 92.8 | 613 | 13 | 1 | 1 | 582 | 1 | 613 | 2.60E-307 | 1063.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048789.t1 | Q5RBB3 | 26.1 | 499 | 195 | 13 | 39 | 533 | 31 | 359 | 3.5e-26 | 121.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048789.t1 | G7LI13 | 92.8 | 613 | 13 | 1 | 1 | 582 | 1 | 613 | 1.9e-307 | 1063.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048789.t1 | MTR_8g098490 | 93.148 | 613 | 11 | 1 | 1 | 582 | 1 | 613 | 0.0 | 1170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048789.t1 | AT5G41190 | 52.389 | 628 | 221 | 12 | 1 | 579 | 1 | 599 | 0.0 | 623 |
Find 160 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCCGCCATTTCCGCATTT+TGG | 0.159935 | 4.3:-6171270 | None:intergenic |
| TCATCACTCTCCGGAATTTC+CGG | 0.192791 | 4.3:-6170226 | None:intergenic |
| ATACCTTTGTTGATTGATTC+AGG | 0.205057 | 4.3:-6169246 | None:intergenic |
| CCAAATGGGTTTGCGCTTGC+TGG | 0.207884 | 4.3:+6170915 | MS.gene048789:CDS |
| TGAAGATAGCAGTGCAAATT+TGG | 0.219331 | 4.3:+6170702 | MS.gene048789:CDS |
| GCTTCCCACTCTTCCAAATT+AGG | 0.241820 | 4.3:-6170070 | None:intergenic |
| GTCAAGTTTGCTAGGGTTAC+TGG | 0.249525 | 4.3:+6169878 | MS.gene048789:CDS |
| ATCTTGTTGATCTTGATTAC+TGG | 0.256732 | 4.3:-6170452 | None:intergenic |
| TTTGCAAACCCAACAGGTTT+TGG | 0.271880 | 4.3:+6169029 | MS.gene048789:CDS |
| GGGTTTGAATGTGCCTAATT+TGG | 0.276019 | 4.3:+6170057 | MS.gene048789:CDS |
| TTCACTGTTACGGCTGAAAT+TGG | 0.294860 | 4.3:+6171234 | MS.gene048789:CDS |
| CTACTCCAGCACGATGCTTT+TGG | 0.301824 | 4.3:-6168961 | None:intergenic |
| CATTGCTCTAACTTATACTT+TGG | 0.301873 | 4.3:+6169937 | MS.gene048789:CDS |
| CAGGGGTTGGTTCCATGGTT+TGG | 0.303048 | 4.3:-6169227 | None:intergenic |
| GCTGTCACTGTTAATGAAAA+TGG | 0.309540 | 4.3:+6171306 | MS.gene048789:CDS |
| CTTCAGCCACCACAATTCTA+AGG | 0.325731 | 4.3:+6172036 | MS.gene048789:CDS |
| CAGAGGAAGGATTCTTGAAT+TGG | 0.335391 | 4.3:-6170125 | None:intergenic |
| GTAGGACGACGACTTCTATA+TGG | 0.345158 | 4.3:+6172003 | MS.gene048789:intron |
| TGAAACTCTTCCGGAAATTC+CGG | 0.357767 | 4.3:+6170216 | MS.gene048789:CDS |
| TTCTGTCCAAAATGCGGAAA+TGG | 0.367588 | 4.3:+6171264 | MS.gene048789:CDS |
| CGTGAGTAGTGATTGTCATT+TGG | 0.375242 | 4.3:-6172118 | None:intergenic |
| AAACACACAAACAACCTTGT+TGG | 0.376229 | 4.3:-6171865 | None:intergenic |
| CATCAGCAGCTTCACTTGAC+TGG | 0.379113 | 4.3:-6170786 | None:intergenic |
| TAATCAAGATCAACAAGATA+TGG | 0.384551 | 4.3:+6170456 | MS.gene048789:CDS |
| TCTACTGTGGCCTGTATAAC+TGG | 0.386129 | 4.3:+6170865 | MS.gene048789:CDS |
| GCAGAATGTTCTTCTCCAAA+TGG | 0.387712 | 4.3:+6170900 | MS.gene048789:CDS |
| ACCTGTTGGGTTTGCAAAAG+AGG | 0.389698 | 4.3:-6169024 | None:intergenic |
| CCAGCAAGCGCAAACCCATT+TGG | 0.393658 | 4.3:-6170915 | None:intergenic |
| GAAAGCTTATGACGAGAAAC+AGG | 0.404878 | 4.3:-6169186 | None:intergenic |
| TGATTCAGGGGTTGGTTCCA+TGG | 0.405703 | 4.3:-6169232 | None:intergenic |
| TGCAAAGTCACCAGTTATAC+AGG | 0.407508 | 4.3:-6170875 | None:intergenic |
| CAGAATGTTCTTCTCCAAAT+GGG | 0.409413 | 4.3:+6170901 | MS.gene048789:CDS |
| GGTTTGCGCTTGCTGGCACC+TGG | 0.419244 | 4.3:+6170922 | MS.gene048789:CDS |
| ATGCTCTCCTGACGGGAGGC+TGG | 0.424797 | 4.3:-6172069 | None:intergenic |
| GCATACTGCTGAAACTCTTC+CGG | 0.427835 | 4.3:+6170207 | MS.gene048789:CDS |
| TGCTCTAACTTATACTTTGG+AGG | 0.431975 | 4.3:+6169940 | MS.gene048789:CDS |
| TGTTAGTTGTCAAGTTTGCT+AGG | 0.431988 | 4.3:+6169870 | MS.gene048789:intron |
| TTCAAGAATCCTTCCTCTGC+AGG | 0.435157 | 4.3:+6170129 | MS.gene048789:CDS |
| CATCCCGGCATGTCCTTCTC+AGG | 0.436359 | 4.3:-6170034 | None:intergenic |
| TACCTTTGTTGATTGATTCA+GGG | 0.439763 | 4.3:-6169245 | None:intergenic |
| TTTGGAAGAGTGGGAAGCAT+TGG | 0.442947 | 4.3:+6170075 | MS.gene048789:CDS |
| TTGTTGATTGATTCAGGGGT+TGG | 0.444212 | 4.3:-6169240 | None:intergenic |
| TCCCTTCCACCTTGAGGTAA+AGG | 0.445988 | 4.3:-6171765 | None:intergenic |
| CTCCTTTCCAGCCTCCCGTC+AGG | 0.448309 | 4.3:+6172062 | MS.gene048789:CDS |
| CATCACTTTGGTGCACATCC+AGG | 0.451839 | 4.3:-6170525 | None:intergenic |
| TTCTCATTGCCTTTACCTCA+AGG | 0.454002 | 4.3:+6171756 | MS.gene048789:CDS |
| AGCATCTTCCAAAACCTGTT+GGG | 0.455962 | 4.3:-6169037 | None:intergenic |
| GTAACAATTACCTGTGCAAC+TGG | 0.456239 | 4.3:-6170960 | None:intergenic |
| TGAGAAGGACATGCCGGGAT+GGG | 0.464992 | 4.3:+6170036 | MS.gene048789:CDS |
| TGCATGTATCATATCATCCT+TGG | 0.465343 | 4.3:-6170575 | None:intergenic |
| TTTGAGGCAGTTGATCTTCA+CGG | 0.467872 | 4.3:-6171812 | None:intergenic |
| TATTGAAAATGTTGTTTCCA+AGG | 0.469382 | 4.3:+6170558 | MS.gene048789:CDS |
| TCATGCCTGCTTCACTGTTA+CGG | 0.473829 | 4.3:+6171224 | MS.gene048789:CDS |
| ACCTTTGTTGATTGATTCAG+GGG | 0.475545 | 4.3:-6169244 | None:intergenic |
| CTGGAGTAGCGTAGTGAAGA+AGG | 0.480883 | 4.3:+6168975 | MS.gene048789:CDS |
| CTCCTGACGGGAGGCTGGAA+AGG | 0.481280 | 4.3:-6172064 | None:intergenic |
| ACTTTGGAGGCTCAGATTCA+CGG | 0.490488 | 4.3:+6169953 | MS.gene048789:CDS |
| GATATGGAAGAAAACATTGA+TGG | 0.491605 | 4.3:+6170472 | MS.gene048789:CDS |
| ATGATGCCAGTGAGCAAAGT+TGG | 0.492731 | 4.3:+6170821 | MS.gene048789:CDS |
| AAATTTGCACTGCTATCTTC+AGG | 0.493660 | 4.3:-6170700 | None:intergenic |
| TTCACGGAACAAAACATCTC+CGG | 0.493961 | 4.3:+6169969 | MS.gene048789:CDS |
| GTTAGTTGTCAAGTTTGCTA+GGG | 0.494452 | 4.3:+6169871 | MS.gene048789:intron |
| GATAAACATTGAAGGGAAGA+TGG | 0.494792 | 4.3:+6170297 | MS.gene048789:CDS |
| CTGCTTCAGAGTTGCAGAGA+GGG | 0.496308 | 4.3:-6170617 | None:intergenic |
| TTCAGCCGTAACAGTGAAGC+AGG | 0.498497 | 4.3:-6171229 | None:intergenic |
| CTATCTTCAGGAGACAGACT+TGG | 0.499148 | 4.3:-6170688 | None:intergenic |
| CACAGATACACCAGTTGCAC+AGG | 0.501209 | 4.3:+6170950 | MS.gene048789:CDS |
| TTTACTGTTTGCACAGGAGG+TGG | 0.501822 | 4.3:-6169998 | None:intergenic |
| TAATGTAACTCGAGGTCGAC+GGG | 0.502431 | 4.3:-6171343 | None:intergenic |
| TGATCAATCTGAGGTTGGTT+CGG | 0.503635 | 4.3:+6170180 | MS.gene048789:CDS |
| CTGAGAAGGACATGCCGGGA+TGG | 0.508366 | 4.3:+6170035 | MS.gene048789:CDS |
| GAGCATCTTCCAAAACCTGT+TGG | 0.508374 | 4.3:-6169038 | None:intergenic |
| GCACAGGAGGTGGACTGTCC+CGG | 0.510227 | 4.3:-6169988 | None:intergenic |
| TATGCTTCTCATCATCACTT+TGG | 0.511242 | 4.3:-6170537 | None:intergenic |
| ACATTTACTGTTTGCACAGG+AGG | 0.511908 | 4.3:-6170001 | None:intergenic |
| TCCATGGTTTGGATATCAAA+GGG | 0.512366 | 4.3:-6169216 | None:intergenic |
| AGAGTGGGAAGCATTGGAAC+AGG | 0.513153 | 4.3:+6170081 | MS.gene048789:CDS |
| TGCCTTTACCTCAAGGTGGA+AGG | 0.513861 | 4.3:+6171763 | MS.gene048789:CDS |
| GTGAAGATCAACTGCCTCAA+AGG | 0.522194 | 4.3:+6171814 | MS.gene048789:CDS |
| CTGTTACGGCTGAAATTGGA+AGG | 0.526837 | 4.3:+6171238 | MS.gene048789:CDS |
| TTCCATGGTTTGGATATCAA+AGG | 0.530246 | 4.3:-6169217 | None:intergenic |
| GTTGCTAATGCTCTCCTGAC+GGG | 0.532845 | 4.3:-6172076 | None:intergenic |
| AAAAGAGGTGGTTGTTGTTG+AGG | 0.533440 | 4.3:-6169009 | None:intergenic |
| ATTGGAATTTGCATTGTCCT+CGG | 0.533440 | 4.3:-6170107 | None:intergenic |
| AAGCAGATGACTCTGGAAGA+AGG | 0.534641 | 4.3:+6170634 | MS.gene048789:CDS |
| GAGAAGGACATGCCGGGATG+GGG | 0.535504 | 4.3:+6170037 | MS.gene048789:CDS |
| TTCACATTTACTGTTTGCAC+AGG | 0.537571 | 4.3:-6170004 | None:intergenic |
| AACTCTGAAGCAGATGACTC+TGG | 0.540443 | 4.3:+6170627 | MS.gene048789:CDS |
| ACTCACGCCCGCGTAAGTAG+TGG | 0.542669 | 4.3:+6172134 | MS.gene048789:CDS |
| TGGTGTATCTGTGATCCTCC+AGG | 0.544263 | 4.3:-6170940 | None:intergenic |
| AAGCATCCAACTTTGCTCAC+TGG | 0.546095 | 4.3:-6170827 | None:intergenic |
| TGAAGATCAACTGCCTCAAA+GGG | 0.546216 | 4.3:+6171815 | MS.gene048789:CDS |
| GCCTTTACCTCAAGGTGGAA+GGG | 0.547026 | 4.3:+6171764 | MS.gene048789:CDS |
| TTAGGATGAAGTACCCTTTG+AGG | 0.550596 | 4.3:-6171828 | None:intergenic |
| TGTGAAGAGGTTGCCTGAGA+AGG | 0.551471 | 4.3:+6170021 | MS.gene048789:CDS |
| AGATGATAAGACTTCAAACC+TGG | 0.551742 | 4.3:+6170507 | MS.gene048789:CDS |
| TCACGGAACAAAACATCTCC+GGG | 0.553706 | 4.3:+6169970 | MS.gene048789:CDS |
| AAGAACCAAAAGCATCGTGC+TGG | 0.559027 | 4.3:+6168956 | MS.gene048789:CDS |
| GTTGCCTGAGAAGGACATGC+CGG | 0.561370 | 4.3:+6170030 | MS.gene048789:CDS |
| CAAGATGATCAATCTGAGGT+TGG | 0.562902 | 4.3:+6170175 | MS.gene048789:CDS |
| AACTCAAGTCCTGCAGAGGA+AGG | 0.563302 | 4.3:-6170138 | None:intergenic |
| GGCACATTCAAACCCCATCC+CGG | 0.567117 | 4.3:-6170049 | None:intergenic |
| AGAGCATTAGCAACTTTCAG+TGG | 0.569217 | 4.3:+6172085 | MS.gene048789:CDS |
| GAGCATTAGCAACTTTCAGT+GGG | 0.573278 | 4.3:+6172086 | MS.gene048789:CDS |
| CTGTCAGTCGTAGTACTCAC+AGG | 0.574410 | 4.3:+6170383 | MS.gene048789:CDS |
| TTCTGTTCCCCAAGTTATGG+AGG | 0.575753 | 4.3:+6169152 | MS.gene048789:intron |
| TTGATGACAATGGAGGTGAT+TGG | 0.580996 | 4.3:+6170353 | MS.gene048789:CDS |
| TTGCCTGAGAAGGACATGCC+GGG | 0.581019 | 4.3:+6170031 | MS.gene048789:CDS |
| TCCTCAAGATGATCAATCTG+AGG | 0.581434 | 4.3:+6170171 | MS.gene048789:CDS |
| CCGCCACGTTCATCACTCTC+CGG | 0.581461 | 4.3:-6170235 | None:intergenic |
| ATCTTTGTCTGAATCTACTG+TGG | 0.586024 | 4.3:+6170852 | MS.gene048789:CDS |
| AGTTGCTAATGCTCTCCTGA+CGG | 0.586879 | 4.3:-6172077 | None:intergenic |
| TAATGAAAATGGATTAATGA+TGG | 0.587751 | 4.3:+6171317 | MS.gene048789:CDS |
| TCCCTTTGATATCCAAACCA+TGG | 0.589516 | 4.3:+6169215 | MS.gene048789:CDS |
| GAGTTACATTACGTGGCACA+AGG | 0.590124 | 4.3:+6171355 | MS.gene048789:CDS |
| GGTGGTTGTTGTTGAGGTGG+CGG | 0.590472 | 4.3:-6169003 | None:intergenic |
| TGAGTACTACGACTGACAGC+AGG | 0.594924 | 4.3:-6170379 | None:intergenic |
| AAGGAGATCCCTTAGAATTG+TGG | 0.596504 | 4.3:-6172045 | None:intergenic |
| TTGAATATCCACTACTTACG+CGG | 0.598952 | 4.3:-6172142 | None:intergenic |
| TTGCGCTTGCTGGCACCTGG+AGG | 0.601247 | 4.3:+6170925 | MS.gene048789:CDS |
| TTCAGCCACCACAATTCTAA+GGG | 0.601789 | 4.3:+6172037 | MS.gene048789:CDS |
| GCGGAAATGGCGGCACCTTG+AGG | 0.602253 | 4.3:+6171277 | MS.gene048789:CDS |
| GAAGATGCTCGTAACCGTCA+TGG | 0.602557 | 4.3:+6169051 | MS.gene048789:CDS |
| AAATGGCGGCACCTTGAGGA+AGG | 0.606950 | 4.3:+6171281 | MS.gene048789:CDS |
| CGACCTCGAGTTACATTACG+TGG | 0.607023 | 4.3:+6171348 | MS.gene048789:CDS |
| ATGTGCCTAATTTGGAAGAG+TGG | 0.608543 | 4.3:+6170065 | MS.gene048789:CDS |
| ACCTCAGATTGATCATCTTG+AGG | 0.608905 | 4.3:-6170172 | None:intergenic |
| AACAAGGAAGAAAGCCAACA+AGG | 0.609876 | 4.3:+6171851 | MS.gene048789:CDS |
| TGGTTTGGATATCAAAGGGA+AGG | 0.619954 | 4.3:-6169212 | None:intergenic |
| TGTGCCTAATTTGGAAGAGT+GGG | 0.621322 | 4.3:+6170066 | MS.gene048789:CDS |
| CAATGACATAGTAAATCACT+CGG | 0.621478 | 4.3:+6170753 | MS.gene048789:CDS |
| TGTCCAAAATGCGGAAATGG+CGG | 0.624434 | 4.3:+6171267 | MS.gene048789:CDS |
| CAAGGACAAGTTGATGACAA+TGG | 0.627479 | 4.3:+6170343 | MS.gene048789:CDS |
| ACTGCATCCCTTCCACCTTG+AGG | 0.628249 | 4.3:-6171771 | None:intergenic |
| TTCAAACTCAAGTCCTGCAG+AGG | 0.629113 | 4.3:-6170142 | None:intergenic |
| GAAGGGAAGATGGTTGCTGA+TGG | 0.630809 | 4.3:+6170307 | MS.gene048789:CDS |
| AGAGGTGGTTGTTGTTGAGG+TGG | 0.631616 | 4.3:-6169006 | None:intergenic |
| TGAATATCCACTACTTACGC+GGG | 0.635815 | 4.3:-6172141 | None:intergenic |
| GGACGACGACTTCTATATGG+TGG | 0.638637 | 4.3:+6172006 | MS.gene048789:intron |
| GGGTACTTCATCCTAAAACA+AGG | 0.642784 | 4.3:+6171835 | MS.gene048789:CDS |
| GATGGAATTGATGCATCTCA+AGG | 0.646560 | 4.3:+6170325 | MS.gene048789:CDS |
| TGCAAACAGTAAATGTGAAG+AGG | 0.648385 | 4.3:+6170008 | MS.gene048789:CDS |
| GAGATCCCTTAGAATTGTGG+TGG | 0.651673 | 4.3:-6172042 | None:intergenic |
| GCTAATGCTCTCCTGACGGG+AGG | 0.659205 | 4.3:-6172073 | None:intergenic |
| AGTGACAGCTACCTTCCTCA+AGG | 0.664365 | 4.3:-6171292 | None:intergenic |
| TGTTGGGTTTGCAAAAGAGG+TGG | 0.668140 | 4.3:-6169021 | None:intergenic |
| ACCCCTGAATCAATCAACAA+AGG | 0.672295 | 4.3:+6169243 | MS.gene048789:CDS |
| GTAATGTAACTCGAGGTCGA+CGG | 0.674307 | 4.3:-6171344 | None:intergenic |
| TCATTGCCTTTACCTCAAGG+TGG | 0.675530 | 4.3:+6171759 | MS.gene048789:CDS |
| GTGCCACGTAATGTAACTCG+AGG | 0.676345 | 4.3:-6171351 | None:intergenic |
| ATACATGCAGAGAACAATGA+CGG | 0.679329 | 4.3:+6170589 | MS.gene048789:CDS |
| ATGAACGTGGCGGTTCAATG+AGG | 0.682906 | 4.3:+6170245 | MS.gene048789:CDS |
| GGACAAGTTGATGACAATGG+AGG | 0.685424 | 4.3:+6170346 | MS.gene048789:CDS |
| GAGTAGCGTAGTGAAGAAGG+AGG | 0.690050 | 4.3:+6168978 | MS.gene048789:CDS |
| AGCATTGGAACAGGAAACCG+AGG | 0.692406 | 4.3:+6170090 | MS.gene048789:CDS |
| TCTGCTTCAGAGTTGCAGAG+AGG | 0.696099 | 4.3:-6170618 | None:intergenic |
| AGTTACATTACGTGGCACAA+GGG | 0.712686 | 4.3:+6171356 | MS.gene048789:CDS |
| ATTCCGGAGAGTGATGAACG+TGG | 0.742400 | 4.3:+6170232 | MS.gene048789:CDS |
| CCGGAGAGTGATGAACGTGG+CGG | 0.753397 | 4.3:+6170235 | MS.gene048789:CDS |
| CAGCAACAGAGATACCATGA+CGG | 0.755141 | 4.3:-6169065 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGTTAAAAAACAAAAA+GGG | - | chr4.3:6169272-6169291 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAAAAACAAAA+AGG | - | chr4.3:6169273-6169292 | None:intergenic | 10.0% |
| !!! | ATATATATGAAAGTATATTT+TGG | + | chr4.3:6169809-6169828 | MS.gene048789:intron | 10.0% |
| !! | GTAACTAATAATAATAGATT+TGG | + | chr4.3:6171513-6171532 | MS.gene048789:intron | 15.0% |
| !! | AAAAAAGTGATAAACATTGA+AGG | + | chr4.3:6170289-6170308 | MS.gene048789:CDS | 20.0% |
| !! | AAAAAGTGATAAACATTGAA+GGG | + | chr4.3:6170290-6170309 | MS.gene048789:CDS | 20.0% |
| !! | AAAATTTACTTCAAATAGCA+AGG | - | chr4.3:6171023-6171042 | None:intergenic | 20.0% |
| !! | ATAATCATGTATCTTAAGAA+TGG | + | chr4.3:6171644-6171663 | MS.gene048789:intron | 20.0% |
| !!! | TAAATTTTTGAATGTGTGAA+GGG | + | chr4.3:6171035-6171054 | MS.gene048789:intron | 20.0% |
| !!! | TAATGAAAATGGATTAATGA+TGG | + | chr4.3:6171317-6171336 | MS.gene048789:CDS | 20.0% |
| ! | AACATAAGCAGTTATATGAA+AGG | + | chr4.3:6169713-6169732 | MS.gene048789:intron | 25.0% |
| ! | ACACAAGACATTATATACTA+AGG | - | chr4.3:6169774-6169793 | None:intergenic | 25.0% |
| ! | ATAAAATGACTAGCATACTA+AGG | - | chr4.3:6171431-6171450 | None:intergenic | 25.0% |
| ! | CAGTTATATGAAAGGATAAT+CGG | + | chr4.3:6169721-6169740 | MS.gene048789:intron | 25.0% |
| ! | GATTATAATGTATTTCACAC+CGG | + | chr4.3:6171542-6171561 | MS.gene048789:intron | 25.0% |
| ! | TAAAATGACTAGCATACTAA+GGG | - | chr4.3:6171430-6171449 | None:intergenic | 25.0% |
| ! | TAATCAAGATCAACAAGATA+TGG | + | chr4.3:6170456-6170475 | MS.gene048789:CDS | 25.0% |
| ! | TACTTAATAACACACTTTGT+AGG | + | chr4.3:6171985-6172004 | MS.gene048789:intron | 25.0% |
| ! | TCATAGAGATTAGAAGAAAT+AGG | - | chr4.3:6171121-6171140 | None:intergenic | 25.0% |
| ! | TTAATTATTTGCATTCCAGA+TGG | + | chr4.3:6171190-6171209 | MS.gene048789:intron | 25.0% |
| !! | GTAAATTTTTGAATGTGTGA+AGG | + | chr4.3:6171034-6171053 | MS.gene048789:intron | 25.0% |
| !! | TTTTCACAAATTCTCCTTTA+TGG | - | chr4.3:6169561-6169580 | None:intergenic | 25.0% |
| !!! | AGATGTTGATTTTCATTTGT+AGG | + | chr4.3:6171620-6171639 | MS.gene048789:intron | 25.0% |
| !!! | ATGTTTATCACTTTTTTCTC+AGG | - | chr4.3:6170286-6170305 | None:intergenic | 25.0% |
| !!! | GTATATTTTGGATTCTAACT+TGG | + | chr4.3:6169821-6169840 | MS.gene048789:intron | 25.0% |
| !!! | GTTGTTTTTATATGCCATAA+AGG | + | chr4.3:6169544-6169563 | MS.gene048789:intron | 25.0% |
| !!! | TATTGAAAATGTTGTTTCCA+AGG | + | chr4.3:6170558-6170577 | MS.gene048789:CDS | 25.0% |
| ATCTTGTTGATCTTGATTAC+TGG | - | chr4.3:6170455-6170474 | None:intergenic | 30.0% | |
| ATTGTTACTAGTTAGTTGCA+CGG | + | chr4.3:6170975-6170994 | MS.gene048789:intron | 30.0% | |
| CAATGACATAGTAAATCACT+CGG | + | chr4.3:6170753-6170772 | MS.gene048789:CDS | 30.0% | |
| CATTGCTCTAACTTATACTT+TGG | + | chr4.3:6169937-6169956 | MS.gene048789:CDS | 30.0% | |
| CCTAAGTTATTTATCCAAAC+AGG | + | chr4.3:6169747-6169766 | MS.gene048789:intron | 30.0% | |
| CCTGTTTGGATAAATAACTT+AGG | - | chr4.3:6169750-6169769 | None:intergenic | 30.0% | |
| GATATGGAAGAAAACATTGA+TGG | + | chr4.3:6170472-6170491 | MS.gene048789:CDS | 30.0% | |
| TGAGTATATTACGAGATACT+GGG | + | chr4.3:6171379-6171398 | MS.gene048789:intron | 30.0% | |
| TTATATACTAAGGTCCTGTT+TGG | - | chr4.3:6169764-6169783 | None:intergenic | 30.0% | |
| TTGTTGAATGCTAGATTCAT+GGG | + | chr4.3:6171491-6171510 | MS.gene048789:intron | 30.0% | |
| ! | ATACCTTTGTTGATTGATTC+AGG | - | chr4.3:6169249-6169268 | None:intergenic | 30.0% |
| ! | TACCTTTGTTGATTGATTCA+GGG | - | chr4.3:6169248-6169267 | None:intergenic | 30.0% |
| !! | AGCTATTCTAAAGAGTTTTC+AGG | - | chr4.3:6169381-6169400 | None:intergenic | 30.0% |
| !! | CTACTGATATAAGTTTTGTG+AGG | - | chr4.3:6169644-6169663 | None:intergenic | 30.0% |
| !!! | TGGAACTCTTTTTTACCATT+GGG | + | chr4.3:6169841-6169860 | MS.gene048789:intron | 30.0% |
| !!! | TTGGAACTCTTTTTTACCAT+TGG | + | chr4.3:6169840-6169859 | MS.gene048789:intron | 30.0% |
| AAACACACAAACAACCTTGT+TGG | - | chr4.3:6171868-6171887 | None:intergenic | 35.0% | |
| AAATTTGCACTGCTATCTTC+AGG | - | chr4.3:6170703-6170722 | None:intergenic | 35.0% | |
| AATAAGCTGACAACGAGTTA+TGG | - | chr4.3:6169358-6169377 | None:intergenic | 35.0% | |
| AATAGCATATTGTGCTTCGT+AGG | - | chr4.3:6171150-6171169 | None:intergenic | 35.0% | |
| AGATGATAAGACTTCAAACC+TGG | + | chr4.3:6170507-6170526 | MS.gene048789:CDS | 35.0% | |
| ATACATGCAGAGAACAATGA+CGG | + | chr4.3:6170589-6170608 | MS.gene048789:CDS | 35.0% | |
| ATATCATCCCATCTTGTACA+TGG | - | chr4.3:6171675-6171694 | None:intergenic | 35.0% | |
| ATCAGATCTTATATCTCTCC+AGG | - | chr4.3:6171569-6171588 | None:intergenic | 35.0% | |
| ATCTTTGTCTGAATCTACTG+TGG | + | chr4.3:6170852-6170871 | MS.gene048789:CDS | 35.0% | |
| ATTGGAATTTGCATTGTCCT+CGG | - | chr4.3:6170110-6170129 | None:intergenic | 35.0% | |
| CAGAATGTTCTTCTCCAAAT+GGG | + | chr4.3:6170901-6170920 | MS.gene048789:CDS | 35.0% | |
| CATCTATCTAAGAGAACTTG+CGG | - | chr4.3:6171605-6171624 | None:intergenic | 35.0% | |
| CTTATCATGATAAGCGCTTA+TGG | + | chr4.3:6169489-6169508 | MS.gene048789:intron | 35.0% | |
| GATAAACATTGAAGGGAAGA+TGG | + | chr4.3:6170297-6170316 | MS.gene048789:CDS | 35.0% | |
| GCTGTCACTGTTAATGAAAA+TGG | + | chr4.3:6171306-6171325 | MS.gene048789:CDS | 35.0% | |
| GGTTAAACCATGTACAAGAT+GGG | + | chr4.3:6171665-6171684 | MS.gene048789:intron | 35.0% | |
| GTGAGTATATTACGAGATAC+TGG | + | chr4.3:6171378-6171397 | MS.gene048789:intron | 35.0% | |
| GTTGTTGAATGCTAGATTCA+TGG | + | chr4.3:6171490-6171509 | MS.gene048789:intron | 35.0% | |
| TATGCTTCTCATCATCACTT+TGG | - | chr4.3:6170540-6170559 | None:intergenic | 35.0% | |
| TGAAGATAGCAGTGCAAATT+TGG | + | chr4.3:6170702-6170721 | MS.gene048789:CDS | 35.0% | |
| TGCAAACAGTAAATGTGAAG+AGG | + | chr4.3:6170008-6170027 | MS.gene048789:CDS | 35.0% | |
| TGCATGTATCATATCATCCT+TGG | - | chr4.3:6170578-6170597 | None:intergenic | 35.0% | |
| TGCTCTAACTTATACTTTGG+AGG | + | chr4.3:6169940-6169959 | MS.gene048789:CDS | 35.0% | |
| TGGTTAAACCATGTACAAGA+TGG | + | chr4.3:6171664-6171683 | MS.gene048789:intron | 35.0% | |
| TTACTTCAAATAGCAAGGAC+AGG | - | chr4.3:6171018-6171037 | None:intergenic | 35.0% | |
| TTCACATTTACTGTTTGCAC+AGG | - | chr4.3:6170007-6170026 | None:intergenic | 35.0% | |
| ! | ACCTTTGTTGATTGATTCAG+GGG | - | chr4.3:6169247-6169266 | None:intergenic | 35.0% |
| ! | AGGATTTTCTGTCCAAAATG+CGG | + | chr4.3:6171258-6171277 | MS.gene048789:CDS | 35.0% |
| ! | TCCATGGTTTGGATATCAAA+GGG | - | chr4.3:6169219-6169238 | None:intergenic | 35.0% |
| ! | TGTTAGTTGTCAAGTTTGCT+AGG | + | chr4.3:6169870-6169889 | MS.gene048789:intron | 35.0% |
| ! | TTCCATGGTTTGGATATCAA+AGG | - | chr4.3:6169220-6169239 | None:intergenic | 35.0% |
| !! | GTTAGTTGTCAAGTTTGCTA+GGG | + | chr4.3:6169871-6169890 | MS.gene048789:intron | 35.0% |
| !! | TAAGTTTTGTGAGGCTGTTT+TGG | - | chr4.3:6169635-6169654 | None:intergenic | 35.0% |
| !!! | TCTTTTTTACCATTGGGATG+TGG | + | chr4.3:6169847-6169866 | MS.gene048789:intron | 35.0% |
| !!! | TTGGCTTTCTTCCTTGTTTT+AGG | - | chr4.3:6171849-6171868 | None:intergenic | 35.0% |
| AACAAGGAAGAAAGCCAACA+AGG | + | chr4.3:6171851-6171870 | MS.gene048789:CDS | 40.0% | |
| AACGACATTCCTACTTGTGT+AGG | + | chr4.3:6169302-6169321 | MS.gene048789:intron | 40.0% | |
| AACGAGTTCTTTCAGTCACT+TGG | + | chr4.3:6171456-6171475 | MS.gene048789:intron | 40.0% | |
| AAGGAGATCCCTTAGAATTG+TGG | - | chr4.3:6172048-6172067 | None:intergenic | 40.0% | |
| ACATTTACTGTTTGCACAGG+AGG | - | chr4.3:6170004-6170023 | None:intergenic | 40.0% | |
| ACCAGCTTCAATAACAGCAT+TGG | - | chr4.3:6169100-6169119 | None:intergenic | 40.0% | |
| ACCCCTGAATCAATCAACAA+AGG | + | chr4.3:6169243-6169262 | MS.gene048789:CDS | 40.0% | |
| ACCTCAGATTGATCATCTTG+AGG | - | chr4.3:6170175-6170194 | None:intergenic | 40.0% | |
| ACGAATCTCCTCCATAACTT+GGG | - | chr4.3:6169163-6169182 | None:intergenic | 40.0% | |
| AGCATCTTCCAAAACCTGTT+GGG | - | chr4.3:6169040-6169059 | None:intergenic | 40.0% | |
| AGTTACATTACGTGGCACAA+GGG | + | chr4.3:6171356-6171375 | MS.gene048789:CDS | 40.0% | |
| ATCTTATATCTCTCCAGGAC+CGG | - | chr4.3:6171564-6171583 | None:intergenic | 40.0% | |
| ATGACACTTGAGTATCCATC+TGG | - | chr4.3:6171208-6171227 | None:intergenic | 40.0% | |
| ATGTGCCTAATTTGGAAGAG+TGG | + | chr4.3:6170065-6170084 | MS.gene048789:CDS | 40.0% | |
| CAGAGGAAGGATTCTTGAAT+TGG | - | chr4.3:6170128-6170147 | None:intergenic | 40.0% | |
| CGTGAGTAGTGATTGTCATT+TGG | - | chr4.3:6172121-6172140 | None:intergenic | 40.0% | |
| GAAAGCTTATGACGAGAAAC+AGG | - | chr4.3:6169189-6169208 | None:intergenic | 40.0% | |
| GAGCATTAGCAACTTTCAGT+GGG | + | chr4.3:6172086-6172105 | MS.gene048789:CDS | 40.0% | |
| GATGGAATTGATGCATCTCA+AGG | + | chr4.3:6170325-6170344 | MS.gene048789:CDS | 40.0% | |
| GCAGAATGTTCTTCTCCAAA+TGG | + | chr4.3:6170900-6170919 | MS.gene048789:CDS | 40.0% | |
| GGGTACTTCATCCTAAAACA+AGG | + | chr4.3:6171835-6171854 | MS.gene048789:CDS | 40.0% | |
| GGGTTTGAATGTGCCTAATT+TGG | + | chr4.3:6170057-6170076 | MS.gene048789:CDS | 40.0% | |
| GTAACAATTACCTGTGCAAC+TGG | - | chr4.3:6170963-6170982 | None:intergenic | 40.0% | |
| TAAGCTCTTCCTACACAAGT+AGG | - | chr4.3:6169314-6169333 | None:intergenic | 40.0% | |
| TCCCTTTGATATCCAAACCA+TGG | + | chr4.3:6169215-6169234 | MS.gene048789:CDS | 40.0% | |
| TCCTCAAGATGATCAATCTG+AGG | + | chr4.3:6170171-6170190 | MS.gene048789:CDS | 40.0% | |
| TGAAACTCTTCCGGAAATTC+CGG | + | chr4.3:6170216-6170235 | MS.gene048789:CDS | 40.0% | |
| TGAAGATCAACTGCCTCAAA+GGG | + | chr4.3:6171815-6171834 | MS.gene048789:CDS | 40.0% | |
| TGCAAAGTCACCAGTTATAC+AGG | - | chr4.3:6170878-6170897 | None:intergenic | 40.0% | |
| TGTGCCTAATTTGGAAGAGT+GGG | + | chr4.3:6170066-6170085 | MS.gene048789:CDS | 40.0% | |
| TTCACGGAACAAAACATCTC+CGG | + | chr4.3:6169969-6169988 | MS.gene048789:CDS | 40.0% | |
| TTCACTGTTACGGCTGAAAT+TGG | + | chr4.3:6171234-6171253 | MS.gene048789:CDS | 40.0% | |
| TTCAGCCACCACAATTCTAA+GGG | + | chr4.3:6172037-6172056 | MS.gene048789:CDS | 40.0% | |
| TTCTCATTGCCTTTACCTCA+AGG | + | chr4.3:6171756-6171775 | MS.gene048789:CDS | 40.0% | |
| TTCTGTCCAAAATGCGGAAA+TGG | + | chr4.3:6171264-6171283 | MS.gene048789:CDS | 40.0% | |
| ! | AAAAGAGGTGGTTGTTGTTG+AGG | - | chr4.3:6169012-6169031 | None:intergenic | 40.0% |
| ! | AGAGCATTAGCAACTTTCAG+TGG | + | chr4.3:6172085-6172104 | MS.gene048789:CDS | 40.0% |
| ! | CAAGATGATCAATCTGAGGT+TGG | + | chr4.3:6170175-6170194 | MS.gene048789:CDS | 40.0% |
| ! | TGATCAATCTGAGGTTGGTT+CGG | + | chr4.3:6170180-6170199 | MS.gene048789:CDS | 40.0% |
| ! | TGGTTTGGATATCAAAGGGA+AGG | - | chr4.3:6169215-6169234 | None:intergenic | 40.0% |
| ! | TGTTTCTGTTCCCCAAGTTA+TGG | + | chr4.3:6169149-6169168 | MS.gene048789:intron | 40.0% |
| ! | TTAGGATGAAGTACCCTTTG+AGG | - | chr4.3:6171831-6171850 | None:intergenic | 40.0% |
| ! | TTGATGACAATGGAGGTGAT+TGG | + | chr4.3:6170353-6170372 | MS.gene048789:CDS | 40.0% |
| ! | TTGTTGATTGATTCAGGGGT+TGG | - | chr4.3:6169243-6169262 | None:intergenic | 40.0% |
| ! | TTTGAGGCAGTTGATCTTCA+CGG | - | chr4.3:6171815-6171834 | None:intergenic | 40.0% |
| ! | TTTGCAAACCCAACAGGTTT+TGG | + | chr4.3:6169029-6169048 | MS.gene048789:CDS | 40.0% |
| !! | CAAGGACAAGTTGATGACAA+TGG | + | chr4.3:6170343-6170362 | MS.gene048789:CDS | 40.0% |
| !! | TTCTAGAAGTGCTTATGAGC+TGG | - | chr4.3:6169692-6169711 | None:intergenic | 40.0% |
| AAAGAACACCACACTCTCGT+GGG | - | chr4.3:6171918-6171937 | None:intergenic | 45.0% | |
| AAGCATCCAACTTTGCTCAC+TGG | - | chr4.3:6170830-6170849 | None:intergenic | 45.0% | |
| AATGTATTTCACACCGGTCC+TGG | + | chr4.3:6171548-6171567 | MS.gene048789:intron | 45.0% | |
| ACCTGTTGGGTTTGCAAAAG+AGG | - | chr4.3:6169027-6169046 | None:intergenic | 45.0% | |
| AGTTGCTAATGCTCTCCTGA+CGG | - | chr4.3:6172080-6172099 | None:intergenic | 45.0% | |
| ATGATGCCAGTGAGCAAAGT+TGG | + | chr4.3:6170821-6170840 | MS.gene048789:CDS | 45.0% | |
| CAACTAACACCACATCCCAA+TGG | - | chr4.3:6169859-6169878 | None:intergenic | 45.0% | |
| CACGAATCTCCTCCATAACT+TGG | - | chr4.3:6169164-6169183 | None:intergenic | 45.0% | |
| CAGCAACAGAGATACCATGA+CGG | - | chr4.3:6169068-6169087 | None:intergenic | 45.0% | |
| CGAATCTCCTCCATAACTTG+GGG | - | chr4.3:6169162-6169181 | None:intergenic | 45.0% | |
| CTATCTTCAGGAGACAGACT+TGG | - | chr4.3:6170691-6170710 | None:intergenic | 45.0% | |
| CTGTTACGGCTGAAATTGGA+AGG | + | chr4.3:6171238-6171257 | MS.gene048789:CDS | 45.0% | |
| CTTCAGCCACCACAATTCTA+AGG | + | chr4.3:6172036-6172055 | MS.gene048789:CDS | 45.0% | |
| GAAGCTGGTGAAAAGCTTCA+TGG | + | chr4.3:6169111-6169130 | MS.gene048789:intron | 45.0% | |
| GAGATCCCTTAGAATTGTGG+TGG | - | chr4.3:6172045-6172064 | None:intergenic | 45.0% | |
| GAGCATCTTCCAAAACCTGT+TGG | - | chr4.3:6169041-6169060 | None:intergenic | 45.0% | |
| GAGTTACATTACGTGGCACA+AGG | + | chr4.3:6171355-6171374 | MS.gene048789:CDS | 45.0% | |
| GCATACTGCTGAAACTCTTC+CGG | + | chr4.3:6170207-6170226 | MS.gene048789:CDS | 45.0% | |
| GCCAATGCTGTTATTGAAGC+TGG | + | chr4.3:6169096-6169115 | MS.gene048789:intron | 45.0% | |
| GCTTCCCACTCTTCCAAATT+AGG | - | chr4.3:6170073-6170092 | None:intergenic | 45.0% | |
| GTAATGTAACTCGAGGTCGA+CGG | - | chr4.3:6171347-6171366 | None:intergenic | 45.0% | |
| GTAGGACGACGACTTCTATA+TGG | + | chr4.3:6172003-6172022 | MS.gene048789:intron | 45.0% | |
| GTGAAGATCAACTGCCTCAA+AGG | + | chr4.3:6171814-6171833 | MS.gene048789:CDS | 45.0% | |
| TAAAGAACACCACACTCTCG+TGG | - | chr4.3:6171919-6171938 | None:intergenic | 45.0% | |
| TAATGTAACTCGAGGTCGAC+GGG | - | chr4.3:6171346-6171365 | None:intergenic | 45.0% | |
| TCACGGAACAAAACATCTCC+GGG | + | chr4.3:6169970-6169989 | MS.gene048789:CDS | 45.0% | |
| TCATCACTCTCCGGAATTTC+CGG | - | chr4.3:6170229-6170248 | None:intergenic | 45.0% | |
| TCATGCCTGCTTCACTGTTA+CGG | + | chr4.3:6171224-6171243 | MS.gene048789:CDS | 45.0% | |
| TCATTGCCTTTACCTCAAGG+TGG | + | chr4.3:6171759-6171778 | MS.gene048789:CDS | 45.0% | |
| TCTACTGTGGCCTGTATAAC+TGG | + | chr4.3:6170865-6170884 | MS.gene048789:CDS | 45.0% | |
| TGTCCAAAATGCGGAAATGG+CGG | + | chr4.3:6171267-6171286 | MS.gene048789:CDS | 45.0% | |
| TGTTGGGTTTGCAAAAGAGG+TGG | - | chr4.3:6169024-6169043 | None:intergenic | 45.0% | |
| TTCAAACTCAAGTCCTGCAG+AGG | - | chr4.3:6170145-6170164 | None:intergenic | 45.0% | |
| TTCAAGAATCCTTCCTCTGC+AGG | + | chr4.3:6170129-6170148 | MS.gene048789:CDS | 45.0% | |
| TTCTGTTCCCCAAGTTATGG+AGG | + | chr4.3:6169152-6169171 | MS.gene048789:intron | 45.0% | |
| TTTACTGTTTGCACAGGAGG+TGG | - | chr4.3:6170001-6170020 | None:intergenic | 45.0% | |
| ! | AAGCAGATGACTCTGGAAGA+AGG | + | chr4.3:6170634-6170653 | MS.gene048789:CDS | 45.0% |
| ! | ACCTCTTTTGCAAACCCAAC+AGG | + | chr4.3:6169023-6169042 | MS.gene048789:CDS | 45.0% |
| ! | ACTTTGGAGGCTCAGATTCA+CGG | + | chr4.3:6169953-6169972 | MS.gene048789:CDS | 45.0% |
| ! | GAAGTGCTTATGAGCTGGTT+TGG | - | chr4.3:6169687-6169706 | None:intergenic | 45.0% |
| ! | TTTGGAAGAGTGGGAAGCAT+TGG | + | chr4.3:6170075-6170094 | MS.gene048789:CDS | 45.0% |
| !! | AACTCTGAAGCAGATGACTC+TGG | + | chr4.3:6170627-6170646 | MS.gene048789:CDS | 45.0% |
| !! | AAGAACCAAAAGCATCGTGC+TGG | + | chr4.3:6168956-6168975 | MS.gene048789:CDS | 45.0% |
| !! | GCTTATGAGCTGGTTTGGAT+TGG | - | chr4.3:6169682-6169701 | None:intergenic | 45.0% |
| !! | GGACAAGTTGATGACAATGG+AGG | + | chr4.3:6170346-6170365 | MS.gene048789:CDS | 45.0% |
| !! | GTCAAGTTTGCTAGGGTTAC+TGG | + | chr4.3:6169878-6169897 | MS.gene048789:CDS | 45.0% |
| !! | TTTATTTATTAATTAATGTT+TGG | + | chr4.3:6169433-6169452 | MS.gene048789:intron | 5.0% |
| AACTCAAGTCCTGCAGAGGA+AGG | - | chr4.3:6170141-6170160 | None:intergenic | 50.0% | |
| AGTGACAGCTACCTTCCTCA+AGG | - | chr4.3:6171295-6171314 | None:intergenic | 50.0% | |
| ATGAACGTGGCGGTTCAATG+AGG | + | chr4.3:6170245-6170264 | MS.gene048789:CDS | 50.0% | |
| ATTCCGGAGAGTGATGAACG+TGG | + | chr4.3:6170232-6170251 | MS.gene048789:CDS | 50.0% | |
| CACAGATACACCAGTTGCAC+AGG | + | chr4.3:6170950-6170969 | MS.gene048789:CDS | 50.0% | |
| CATCAGCAGCTTCACTTGAC+TGG | - | chr4.3:6170789-6170808 | None:intergenic | 50.0% | |
| CGACCTCGAGTTACATTACG+TGG | + | chr4.3:6171348-6171367 | MS.gene048789:CDS | 50.0% | |
| CTGCTTCAGAGTTGCAGAGA+GGG | - | chr4.3:6170620-6170639 | None:intergenic | 50.0% | |
| CTGGAGTAGCGTAGTGAAGA+AGG | + | chr4.3:6168975-6168994 | MS.gene048789:CDS | 50.0% | |
| CTGTCAGTCGTAGTACTCAC+AGG | + | chr4.3:6170383-6170402 | MS.gene048789:CDS | 50.0% | |
| GAAGATGCTCGTAACCGTCA+TGG | + | chr4.3:6169051-6169070 | MS.gene048789:CDS | 50.0% | |
| GAAGGGAAGATGGTTGCTGA+TGG | + | chr4.3:6170307-6170326 | MS.gene048789:CDS | 50.0% | |
| GAGTAGCGTAGTGAAGAAGG+AGG | + | chr4.3:6168978-6168997 | MS.gene048789:CDS | 50.0% | |
| GCCTTTACCTCAAGGTGGAA+GGG | + | chr4.3:6171764-6171783 | MS.gene048789:CDS | 50.0% | |
| GGACGACGACTTCTATATGG+TGG | + | chr4.3:6172006-6172025 | MS.gene048789:intron | 50.0% | |
| GTGCCACGTAATGTAACTCG+AGG | - | chr4.3:6171354-6171373 | None:intergenic | 50.0% | |
| GTTGCTAATGCTCTCCTGAC+GGG | - | chr4.3:6172079-6172098 | None:intergenic | 50.0% | |
| GTTTGTTTCCCACGAGAGTG+TGG | + | chr4.3:6171907-6171926 | MS.gene048789:intron | 50.0% | |
| TCCCTTCCACCTTGAGGTAA+AGG | - | chr4.3:6171768-6171787 | None:intergenic | 50.0% | |
| TCTGCTTCAGAGTTGCAGAG+AGG | - | chr4.3:6170621-6170640 | None:intergenic | 50.0% | |
| TGAGTACTACGACTGACAGC+AGG | - | chr4.3:6170382-6170401 | None:intergenic | 50.0% | |
| TGCCTTTACCTCAAGGTGGA+AGG | + | chr4.3:6171763-6171782 | MS.gene048789:CDS | 50.0% | |
| TGGTGTATCTGTGATCCTCC+AGG | - | chr4.3:6170943-6170962 | None:intergenic | 50.0% | |
| TGTGAAGAGGTTGCCTGAGA+AGG | + | chr4.3:6170021-6170040 | MS.gene048789:CDS | 50.0% | |
| TTCAGCCGTAACAGTGAAGC+AGG | - | chr4.3:6171232-6171251 | None:intergenic | 50.0% | |
| ! | AGAGGTGGTTGTTGTTGAGG+TGG | - | chr4.3:6169009-6169028 | None:intergenic | 50.0% |
| ! | AGCATTGGAACAGGAAACCG+AGG | + | chr4.3:6170090-6170109 | MS.gene048789:CDS | 50.0% |
| ! | CATCACTTTGGTGCACATCC+AGG | - | chr4.3:6170528-6170547 | None:intergenic | 50.0% |
| ! | CTACTCCAGCACGATGCTTT+TGG | - | chr4.3:6168964-6168983 | None:intergenic | 50.0% |
| !! | AGAGTGGGAAGCATTGGAAC+AGG | + | chr4.3:6170081-6170100 | MS.gene048789:CDS | 50.0% |
| !! | TGATTCAGGGGTTGGTTCCA+TGG | - | chr4.3:6169235-6169254 | None:intergenic | 50.0% |
| AAATGGCGGCACCTTGAGGA+AGG | + | chr4.3:6171281-6171300 | MS.gene048789:CDS | 55.0% | |
| ACTGCATCCCTTCCACCTTG+AGG | - | chr4.3:6171774-6171793 | None:intergenic | 55.0% | |
| CCAGCAAGCGCAAACCCATT+TGG | - | chr4.3:6170918-6170937 | None:intergenic | 55.0% | |
| GGCACATTCAAACCCCATCC+CGG | - | chr4.3:6170052-6170071 | None:intergenic | 55.0% | |
| GTTGCCTGAGAAGGACATGC+CGG | + | chr4.3:6170030-6170049 | MS.gene048789:CDS | 55.0% | |
| TGAGAAGGACATGCCGGGAT+GGG | + | chr4.3:6170036-6170055 | MS.gene048789:CDS | 55.0% | |
| TTGCCTGAGAAGGACATGCC+GGG | + | chr4.3:6170031-6170050 | MS.gene048789:CDS | 55.0% | |
| ! | CCAAATGGGTTTGCGCTTGC+TGG | + | chr4.3:6170915-6170934 | MS.gene048789:CDS | 55.0% |
| ! | GGTGGTTGTTGTTGAGGTGG+CGG | - | chr4.3:6169006-6169025 | None:intergenic | 55.0% |
| ! | GTGCCGCCATTTCCGCATTT+TGG | - | chr4.3:6171273-6171292 | None:intergenic | 55.0% |
| !! | CAGGGGTTGGTTCCATGGTT+TGG | - | chr4.3:6169230-6169249 | None:intergenic | 55.0% |
| CATCCCGGCATGTCCTTCTC+AGG | - | chr4.3:6170037-6170056 | None:intergenic | 60.0% | |
| CCGCCACGTTCATCACTCTC+CGG | - | chr4.3:6170238-6170257 | None:intergenic | 60.0% | |
| CCGGAGAGTGATGAACGTGG+CGG | + | chr4.3:6170235-6170254 | MS.gene048789:CDS | 60.0% | |
| CTGAGAAGGACATGCCGGGA+TGG | + | chr4.3:6170035-6170054 | MS.gene048789:CDS | 60.0% | |
| GAGAAGGACATGCCGGGATG+GGG | + | chr4.3:6170037-6170056 | MS.gene048789:CDS | 60.0% | |
| GCTAATGCTCTCCTGACGGG+AGG | - | chr4.3:6172076-6172095 | None:intergenic | 60.0% | |
| ATGCTCTCCTGACGGGAGGC+TGG | - | chr4.3:6172072-6172091 | None:intergenic | 65.0% | |
| CTCCTGACGGGAGGCTGGAA+AGG | - | chr4.3:6172067-6172086 | None:intergenic | 65.0% | |
| CTCCTTTCCAGCCTCCCGTC+AGG | + | chr4.3:6172062-6172081 | MS.gene048789:CDS | 65.0% | |
| GCGGAAATGGCGGCACCTTG+AGG | + | chr4.3:6171277-6171296 | MS.gene048789:CDS | 65.0% | |
| ! | GGTTTGCGCTTGCTGGCACC+TGG | + | chr4.3:6170922-6170941 | MS.gene048789:CDS | 65.0% |
| ! | TTGCGCTTGCTGGCACCTGG+AGG | + | chr4.3:6170925-6170944 | MS.gene048789:CDS | 65.0% |
| !! | GCACAGGAGGTGGACTGTCC+CGG | - | chr4.3:6169991-6170010 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 6168952 | 6172153 | 6168952 | ID=MS.gene048789 |
| chr4.3 | mRNA | 6168952 | 6172153 | 6168952 | ID=MS.gene048789.t1;Parent=MS.gene048789 |
| chr4.3 | exon | 6168952 | 6169072 | 6168952 | ID=MS.gene048789.t1.exon1;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6168952 | 6169072 | 6168952 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| chr4.3 | exon | 6169166 | 6169264 | 6169166 | ID=MS.gene048789.t1.exon2;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6169166 | 6169264 | 6169166 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| chr4.3 | exon | 6169876 | 6170971 | 6169876 | ID=MS.gene048789.t1.exon3;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6169876 | 6170971 | 6169876 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| chr4.3 | exon | 6171209 | 6171377 | 6171209 | ID=MS.gene048789.t1.exon4;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6171209 | 6171377 | 6171209 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| chr4.3 | exon | 6171756 | 6171872 | 6171756 | ID=MS.gene048789.t1.exon5;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6171756 | 6171872 | 6171756 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| chr4.3 | exon | 6172007 | 6172153 | 6172007 | ID=MS.gene048789.t1.exon6;Parent=MS.gene048789.t1 |
| chr4.3 | CDS | 6172007 | 6172153 | 6172007 | ID=cds.MS.gene048789.t1;Parent=MS.gene048789.t1 |
| Gene Sequence |
| Protein sequence |
