Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72163.t1 | XP_003630534.1 | 97.9 | 613 | 13 | 0 | 1 | 613 | 1 | 613 | 0.00E+00 | 1136.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72163.t1 | Q5RBB3 | 26.0 | 523 | 212 | 14 | 46 | 564 | 8 | 359 | 2.6e-27 | 125.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72163.t1 | G7LI13 | 97.9 | 613 | 13 | 0 | 1 | 613 | 1 | 613 | 0.0e+00 | 1136.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053443 | MS.gene72163 | 0.805108 | 1.57E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene72163 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene058030 | MS.gene72163 | 0.827645 | 1.39E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72163.t1 | MTR_8g098490 | 98.042 | 613 | 12 | 0 | 1 | 613 | 1 | 613 | 0.0 | 1243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72163.t1 | AT5G41190 | 55.414 | 628 | 233 | 11 | 1 | 610 | 1 | 599 | 0.0 | 675 |
Find 166 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCACTCTCCGGAATTTC+TGG | 0.117528 | 4.2:-6695876 | None:intergenic |
| GTGCCACCATTTCCGCATTT+TGG | 0.164762 | 4.2:-6696920 | None:intergenic |
| CCAAATGGGTTTGCGCTTGC+TGG | 0.207884 | 4.2:+6696565 | MS.gene72163:CDS |
| TGAAGATAGCAGTGCAAATT+TGG | 0.219331 | 4.2:+6696352 | MS.gene72163:CDS |
| ATACCTTTGTTGATGGATTC+AGG | 0.224381 | 4.2:-6694896 | None:intergenic |
| GCTTCCCACTCTTCCAAATT+AGG | 0.241820 | 4.2:-6695720 | None:intergenic |
| GTCAAGTTTGCTAGGGTTAC+TGG | 0.249525 | 4.2:+6695528 | MS.gene72163:CDS |
| ATCTTGTTGATCTTGATTAC+TGG | 0.256732 | 4.2:-6696102 | None:intergenic |
| GGGTTTGAATGTGCCTAATT+TGG | 0.276019 | 4.2:+6695707 | MS.gene72163:CDS |
| TTCACTGTTACTGCTGAAAT+TGG | 0.291257 | 4.2:+6696884 | MS.gene72163:CDS |
| TTTGCAAACCCAACAGGTTT+TGG | 0.297325 | 4.2:+6694679 | MS.gene72163:CDS |
| CTACTCCAGCACGATGCTTT+TGG | 0.301824 | 4.2:-6694611 | None:intergenic |
| CATTGCTCTAACTTATACTT+TGG | 0.301873 | 4.2:+6695587 | MS.gene72163:CDS |
| CAGGGGTTGGTTCCATGGTT+TGG | 0.303048 | 4.2:-6694877 | None:intergenic |
| GCTGTCACTGTTAATGAAAA+TGG | 0.309540 | 4.2:+6696956 | MS.gene72163:CDS |
| CTTCAGCCACCACAATTCTA+AGG | 0.325731 | 4.2:+6697697 | MS.gene72163:CDS |
| AAAAGGGATACCTTTGTTGA+TGG | 0.338974 | 4.2:-6694903 | None:intergenic |
| GTAGGACGACGACTTCTATA+TGG | 0.345158 | 4.2:+6697664 | MS.gene72163:intron |
| CGTGAGTAGTGATTGTCATT+TGG | 0.375242 | 4.2:-6697779 | None:intergenic |
| TTCTGTCCAAAATGCGGAAA+TGG | 0.376057 | 4.2:+6696914 | MS.gene72163:CDS |
| AAACACACAAACAACCTTGT+TGG | 0.376229 | 4.2:-6697526 | None:intergenic |
| CATCAGCAGCTTCACTTGAC+TGG | 0.379113 | 4.2:-6696436 | None:intergenic |
| TGAAACTCTTCCAGAAATTC+CGG | 0.384527 | 4.2:+6695866 | MS.gene72163:CDS |
| TAATCAAGATCAACAAGATA+TGG | 0.384551 | 4.2:+6696106 | MS.gene72163:CDS |
| TCTACTGTGGCCTGTATAAC+TGG | 0.386129 | 4.2:+6696515 | MS.gene72163:CDS |
| GCAGAATGTTCTTCTCCAAA+TGG | 0.387712 | 4.2:+6696550 | MS.gene72163:CDS |
| CCAGCAAGCGCAAACCCATT+TGG | 0.393658 | 4.2:-6696565 | None:intergenic |
| GGATTCAGGGGTTGGTTCCA+TGG | 0.393846 | 4.2:-6694882 | None:intergenic |
| GAAAGCTTATGACGAGAAAC+AGG | 0.404878 | 4.2:-6694836 | None:intergenic |
| TGCAAAGTCACCAGTTATAC+AGG | 0.407508 | 4.2:-6696525 | None:intergenic |
| CAGAATGTTCTTCTCCAAAT+GGG | 0.409413 | 4.2:+6696551 | MS.gene72163:CDS |
| TACCTTTGTTGATGGATTCA+GGG | 0.415644 | 4.2:-6694895 | None:intergenic |
| GGTTTGCGCTTGCTGGCACC+TGG | 0.419244 | 4.2:+6696572 | MS.gene72163:CDS |
| TGTTTCTGTTCCCGAAGTTA+TGG | 0.420287 | 4.2:+6694799 | MS.gene72163:CDS |
| ATGCTCTCCTGACGGGAGGC+TGG | 0.424797 | 4.2:-6697730 | None:intergenic |
| TGCTCTAACTTATACTTTGG+AGG | 0.431975 | 4.2:+6695590 | MS.gene72163:CDS |
| TGTTAGTTGTCAAGTTTGCT+AGG | 0.431988 | 4.2:+6695520 | MS.gene72163:intron |
| TTCAAGAATCCTTCCTCTGC+AGG | 0.435157 | 4.2:+6695779 | MS.gene72163:CDS |
| CATCCCGGCATGTCCTTCTC+AGG | 0.436359 | 4.2:-6695684 | None:intergenic |
| TTTGGAAGAGTGGGAAGCAT+TGG | 0.442947 | 4.2:+6695725 | MS.gene72163:CDS |
| TTCACGGAACAAAACATCTC+AGG | 0.444574 | 4.2:+6695619 | MS.gene72163:CDS |
| TCCCTTCCACCTTGAGGTAA+AGG | 0.445988 | 4.2:-6697426 | None:intergenic |
| CTCCTTTCCAGCCTCCCGTC+AGG | 0.448309 | 4.2:+6697723 | MS.gene72163:CDS |
| CATCACTTTGGTGCACATCC+AGG | 0.451839 | 4.2:-6696175 | None:intergenic |
| TTCTCATTGCCTTTACCTCA+AGG | 0.454002 | 4.2:+6697417 | MS.gene72163:CDS |
| GAAGCTGGTGAAAAGCTTCA+TGG | 0.455837 | 4.2:+6694761 | MS.gene72163:CDS |
| AGCATCTTCCAAAACCTGTT+GGG | 0.455962 | 4.2:-6694687 | None:intergenic |
| GTAACAATTACCTGTGCAAC+TGG | 0.456239 | 4.2:-6696610 | None:intergenic |
| ACCTGTTGGGTTTGCAAAAG+TGG | 0.459872 | 4.2:-6694674 | None:intergenic |
| TGAGAAGGACATGCCGGGAT+GGG | 0.464992 | 4.2:+6695686 | MS.gene72163:CDS |
| TTGTTGATGGATTCAGGGGT+TGG | 0.465250 | 4.2:-6694890 | None:intergenic |
| TGCATGTATCATATCATCCT+TGG | 0.465343 | 4.2:-6696225 | None:intergenic |
| TTTGAGGCAGTTGATCTTCA+CGG | 0.467872 | 4.2:-6697473 | None:intergenic |
| TATTGAAAATGTTGTTTCCA+AGG | 0.469382 | 4.2:+6696208 | MS.gene72163:CDS |
| CGAATCTCCTCCATAACTTC+GGG | 0.471182 | 4.2:-6694809 | None:intergenic |
| TTTACTGTTTGCACAGGAGG+TGG | 0.471720 | 4.2:-6695648 | None:intergenic |
| CAGAGGAAGGATTCTTGAAT+CGG | 0.479778 | 4.2:-6695775 | None:intergenic |
| CTGGAGTAGCGTAGTGAAGA+AGG | 0.480883 | 4.2:+6694625 | MS.gene72163:CDS |
| CTCCTGACGGGAGGCTGGAA+AGG | 0.481280 | 4.2:-6697725 | None:intergenic |
| ACTTTGGAGGCTCAGATTCA+CGG | 0.490488 | 4.2:+6695603 | MS.gene72163:CDS |
| TTCAGCAGTAACAGTGAAGC+AGG | 0.491505 | 4.2:-6696879 | None:intergenic |
| GATATGGAAGAAAACATTGA+TGG | 0.491605 | 4.2:+6696122 | MS.gene72163:CDS |
| ATGATGCCAGTGAGCAAAGT+TGG | 0.492731 | 4.2:+6696471 | MS.gene72163:CDS |
| AAATTTGCACTGCTATCTTC+AGG | 0.493660 | 4.2:-6696350 | None:intergenic |
| GTTAGTTGTCAAGTTTGCTA+GGG | 0.494452 | 4.2:+6695521 | MS.gene72163:intron |
| ACCAGCTTCAATAACAGCAT+TGG | 0.494776 | 4.2:-6694747 | None:intergenic |
| GATAAACATTGAAGGGAAGA+TGG | 0.494792 | 4.2:+6695947 | MS.gene72163:CDS |
| ATCGGAATTTGCATTGTCCT+CGG | 0.495690 | 4.2:-6695757 | None:intergenic |
| CTATCTTCAGGAGACAGACT+TGG | 0.499148 | 4.2:-6696338 | None:intergenic |
| CACAGATACACCAGTTGCAC+AGG | 0.501209 | 4.2:+6696600 | MS.gene72163:CDS |
| TAATGTAACTCGAGGTCGAC+GGG | 0.502431 | 4.2:-6696993 | None:intergenic |
| TGATCAATCTGAGGTTGGTT+CGG | 0.503635 | 4.2:+6695830 | MS.gene72163:CDS |
| CTGAGAAGGACATGCCGGGA+TGG | 0.508366 | 4.2:+6695685 | MS.gene72163:CDS |
| GAGCATCTTCCAAAACCTGT+TGG | 0.508374 | 4.2:-6694688 | None:intergenic |
| TATGCTTCTCATCATCACTT+TGG | 0.511242 | 4.2:-6696187 | None:intergenic |
| ACATTTACTGTTTGCACAGG+AGG | 0.511908 | 4.2:-6695651 | None:intergenic |
| TCCATGGTTTGGATATCAAA+GGG | 0.512366 | 4.2:-6694866 | None:intergenic |
| ACCTTTGTTGATGGATTCAG+GGG | 0.512889 | 4.2:-6694894 | None:intergenic |
| AGAGTGGGAAGCATTGGAAC+AGG | 0.513153 | 4.2:+6695731 | MS.gene72163:CDS |
| TGCCTTTACCTCAAGGTGGA+AGG | 0.513861 | 4.2:+6697424 | MS.gene72163:CDS |
| CTGTTACTGCTGAAATTGGA+AGG | 0.516329 | 4.2:+6696888 | MS.gene72163:CDS |
| AAAAGTGGTGGTGGTTGTTG+AGG | 0.517124 | 4.2:-6694659 | None:intergenic |
| ACGAATCTCCTCCATAACTT+CGG | 0.517914 | 4.2:-6694810 | None:intergenic |
| GCCAATGCTGTTATTGAAGC+TGG | 0.519074 | 4.2:+6694746 | MS.gene72163:CDS |
| GTGAAGATCAACTGCCTCAA+AGG | 0.522194 | 4.2:+6697475 | MS.gene72163:CDS |
| TTCCATGGTTTGGATATCAA+AGG | 0.530246 | 4.2:-6694867 | None:intergenic |
| TGGGTTTGCAAAAGTGGTGG+TGG | 0.530280 | 4.2:-6694668 | None:intergenic |
| GTTGCTAATGCTCTCCTGAC+GGG | 0.532845 | 4.2:-6697737 | None:intergenic |
| CTGCTTCAGAGTTGCAGAGA+GGG | 0.534240 | 4.2:-6696267 | None:intergenic |
| GAGAAGGACATGCCGGGATG+GGG | 0.535504 | 4.2:+6695687 | MS.gene72163:CDS |
| TTCACATTTACTGTTTGCAC+AGG | 0.537571 | 4.2:-6695654 | None:intergenic |
| ACTCACGCCCGCGTAAGTAG+TGG | 0.542669 | 4.2:+6697795 | MS.gene72163:CDS |
| GGTGGTGGTTGTTGAGGTGG+CGG | 0.542821 | 4.2:-6694653 | None:intergenic |
| TGGTGTATCTGTGATCCTCC+AGG | 0.544263 | 4.2:-6696590 | None:intergenic |
| AAGCATCCAACTTTGCTCAC+TGG | 0.546095 | 4.2:-6696477 | None:intergenic |
| TGAAGATCAACTGCCTCAAA+GGG | 0.546216 | 4.2:+6697476 | MS.gene72163:CDS |
| GCCTTTACCTCAAGGTGGAA+GGG | 0.547026 | 4.2:+6697425 | MS.gene72163:CDS |
| TTAGGATGAAGTACCCTTTG+AGG | 0.550596 | 4.2:-6697489 | None:intergenic |
| TGTGAAGAGGTTGCCTGAGA+AGG | 0.551471 | 4.2:+6695671 | MS.gene72163:CDS |
| AGATGATAAGACTTCAAACC+TGG | 0.551742 | 4.2:+6696157 | MS.gene72163:CDS |
| AAGAACCAAAAGCATCGTGC+TGG | 0.559027 | 4.2:+6694606 | MS.gene72163:CDS |
| GTTGCCTGAGAAGGACATGC+CGG | 0.561370 | 4.2:+6695680 | MS.gene72163:CDS |
| CAAGATGATCAATCTGAGGT+TGG | 0.562902 | 4.2:+6695825 | MS.gene72163:CDS |
| AACTCAAGTCCTGCAGAGGA+AGG | 0.563302 | 4.2:-6695788 | None:intergenic |
| GGCACATTCAAACCCCATCC+CGG | 0.567117 | 4.2:-6695699 | None:intergenic |
| AGAGCATTAGCAACTTTCAG+TGG | 0.569217 | 4.2:+6697746 | MS.gene72163:CDS |
| TTACTGTTTGCACAGGAGGT+GGG | 0.570348 | 4.2:-6695647 | None:intergenic |
| AAGCAGATAACTCTGGAAGA+AGG | 0.573080 | 4.2:+6696284 | MS.gene72163:CDS |
| GAGCATTAGCAACTTTCAGT+GGG | 0.573278 | 4.2:+6697747 | MS.gene72163:CDS |
| CTGTCAGTCGTAGTACTCAC+AGG | 0.574410 | 4.2:+6696033 | MS.gene72163:CDS |
| AGTGGTGGTGGTTGTTGAGG+TGG | 0.577070 | 4.2:-6694656 | None:intergenic |
| TTGATGACAATGGAGGTGAT+TGG | 0.580996 | 4.2:+6696003 | MS.gene72163:CDS |
| TTGCCTGAGAAGGACATGCC+GGG | 0.581019 | 4.2:+6695681 | MS.gene72163:CDS |
| TCCTCAAGATGATCAATCTG+AGG | 0.581434 | 4.2:+6695821 | MS.gene72163:CDS |
| CCGCCACGTTCATCACTCTC+CGG | 0.581461 | 4.2:-6695885 | None:intergenic |
| AACTCTGAAGCAGATAACTC+TGG | 0.585499 | 4.2:+6696277 | MS.gene72163:CDS |
| ATCTTTGTCTGAATCTACTG+TGG | 0.586024 | 4.2:+6696502 | MS.gene72163:CDS |
| AGTTGCTAATGCTCTCCTGA+CGG | 0.586879 | 4.2:-6697738 | None:intergenic |
| TAATGAAAATGGATTAATGA+TGG | 0.587751 | 4.2:+6696967 | MS.gene72163:CDS |
| TCCCTTTGATATCCAAACCA+TGG | 0.589516 | 4.2:+6694865 | MS.gene72163:CDS |
| GAGTTACATTACGTGGCACA+AGG | 0.590124 | 4.2:+6697005 | MS.gene72163:CDS |
| TTCTGTTCCCGAAGTTATGG+AGG | 0.592948 | 4.2:+6694802 | MS.gene72163:CDS |
| TGAGTACTACGACTGACAGC+AGG | 0.594924 | 4.2:-6696029 | None:intergenic |
| AAGGAGATCCCTTAGAATTG+TGG | 0.596504 | 4.2:-6697706 | None:intergenic |
| TTGAATATCCACTACTTACG+CGG | 0.598952 | 4.2:-6697803 | None:intergenic |
| TTGCGCTTGCTGGCACCTGG+AGG | 0.601247 | 4.2:+6696575 | MS.gene72163:CDS |
| TTCAGCCACCACAATTCTAA+GGG | 0.601789 | 4.2:+6697698 | MS.gene72163:CDS |
| TGTCCAAAATGCGGAAATGG+TGG | 0.602304 | 4.2:+6696917 | MS.gene72163:CDS |
| GAAGATGCTCGTAACCGTCA+TGG | 0.602557 | 4.2:+6694701 | MS.gene72163:CDS |
| AAATGGTGGCACCTTGAGGA+AGG | 0.604511 | 4.2:+6696931 | MS.gene72163:CDS |
| CGACCTCGAGTTACATTACG+TGG | 0.607023 | 4.2:+6696998 | MS.gene72163:CDS |
| ATGTGCCTAATTTGGAAGAG+TGG | 0.608543 | 4.2:+6695715 | MS.gene72163:CDS |
| ACCTCAGATTGATCATCTTG+AGG | 0.608905 | 4.2:-6695822 | None:intergenic |
| AACAAGGAAGAAAGCCAACA+AGG | 0.609876 | 4.2:+6697512 | MS.gene72163:CDS |
| TGGTTTGGATATCAAAGGGA+AGG | 0.619954 | 4.2:-6694862 | None:intergenic |
| TGTGCCTAATTTGGAAGAGT+GGG | 0.621322 | 4.2:+6695716 | MS.gene72163:CDS |
| CAATGACATAGTAAATCACT+CGG | 0.621478 | 4.2:+6696403 | MS.gene72163:CDS |
| GCGGAAATGGTGGCACCTTG+AGG | 0.621994 | 4.2:+6696927 | MS.gene72163:CDS |
| CAAGGACAAGTTGATGACAA+TGG | 0.627479 | 4.2:+6695993 | MS.gene72163:CDS |
| ACTGCATCCCTTCCACCTTG+AGG | 0.628249 | 4.2:-6697432 | None:intergenic |
| TTCAAACTCAAGTCCTGCAG+AGG | 0.629113 | 4.2:-6695792 | None:intergenic |
| GAAGGGAAGATGGTTGCTGA+TGG | 0.630809 | 4.2:+6695957 | MS.gene72163:CDS |
| TCACGGAACAAAACATCTCA+GGG | 0.633868 | 4.2:+6695620 | MS.gene72163:CDS |
| TGAATATCCACTACTTACGC+GGG | 0.635815 | 4.2:-6697802 | None:intergenic |
| GGACGACGACTTCTATATGG+TGG | 0.638637 | 4.2:+6697667 | MS.gene72163:intron |
| GGGTACTTCATCCTAAAACA+AGG | 0.642784 | 4.2:+6697496 | MS.gene72163:CDS |
| GATGGAATTGATGCATCTCA+AGG | 0.646560 | 4.2:+6695975 | MS.gene72163:CDS |
| TGCAAACAGTAAATGTGAAG+AGG | 0.648385 | 4.2:+6695658 | MS.gene72163:CDS |
| GAGATCCCTTAGAATTGTGG+TGG | 0.651673 | 4.2:-6697703 | None:intergenic |
| GCTAATGCTCTCCTGACGGG+AGG | 0.659205 | 4.2:-6697734 | None:intergenic |
| ACCCCTGAATCCATCAACAA+AGG | 0.662188 | 4.2:+6694893 | MS.gene72163:CDS |
| AGTGACAGCTACCTTCCTCA+AGG | 0.664365 | 4.2:-6696942 | None:intergenic |
| TGTTGGGTTTGCAAAAGTGG+TGG | 0.672608 | 4.2:-6694671 | None:intergenic |
| GTAATGTAACTCGAGGTCGA+CGG | 0.674307 | 4.2:-6696994 | None:intergenic |
| TCATTGCCTTTACCTCAAGG+TGG | 0.675530 | 4.2:+6697420 | MS.gene72163:CDS |
| GTGCCACGTAATGTAACTCG+AGG | 0.676345 | 4.2:-6697001 | None:intergenic |
| ATACATGCAGAGAACAATGA+CGG | 0.679329 | 4.2:+6696239 | MS.gene72163:CDS |
| ATGAACGTGGCGGTTCAATG+AGG | 0.682906 | 4.2:+6695895 | MS.gene72163:CDS |
| GGACAAGTTGATGACAATGG+AGG | 0.685424 | 4.2:+6695996 | MS.gene72163:CDS |
| GAGTAGCGTAGTGAAGAAGG+AGG | 0.690050 | 4.2:+6694628 | MS.gene72163:CDS |
| AGCATTGGAACAGGAAACCG+AGG | 0.692406 | 4.2:+6695740 | MS.gene72163:CDS |
| TCTGCTTCAGAGTTGCAGAG+AGG | 0.697016 | 4.2:-6696268 | None:intergenic |
| AGTTACATTACGTGGCACAA+GGG | 0.712686 | 4.2:+6697006 | MS.gene72163:CDS |
| ATTCCGGAGAGTGATGAACG+TGG | 0.742400 | 4.2:+6695882 | MS.gene72163:CDS |
| CCGGAGAGTGATGAACGTGG+CGG | 0.753397 | 4.2:+6695885 | MS.gene72163:CDS |
| CAGCAACAGAGATACCATGA+CGG | 0.755141 | 4.2:-6694715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGTTAAAAAACAAAAA+GGG | - | chr4.2:6694922-6694941 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAAAAACAAAA+AGG | - | chr4.2:6694923-6694942 | None:intergenic | 10.0% |
| !!! | ATATATATGAAAGTATATTT+TGG | + | chr4.2:6695459-6695478 | MS.gene72163:intron | 10.0% |
| !! | AAAAAAGTGATAAACATTGA+AGG | + | chr4.2:6695939-6695958 | MS.gene72163:CDS | 20.0% |
| !! | AAAAAGTGATAAACATTGAA+GGG | + | chr4.2:6695940-6695959 | MS.gene72163:CDS | 20.0% |
| !! | AAAATTTACTTCAAATAGCA+AGG | - | chr4.2:6696673-6696692 | None:intergenic | 20.0% |
| !! | ATAATCATGTATCTTAAGAA+TGG | + | chr4.2:6697305-6697324 | MS.gene72163:intron | 20.0% |
| !! | TTAAATACGTATATAGCTAA+TGG | + | chr4.2:6697547-6697566 | MS.gene72163:intron | 20.0% |
| !!! | ATGTTTATCACTTTTTTCTT+AGG | - | chr4.2:6695936-6695955 | None:intergenic | 20.0% |
| !!! | TAAATTTTTGAATGTGTGAA+GGG | + | chr4.2:6696685-6696704 | MS.gene72163:intron | 20.0% |
| !!! | TAATGAAAATGGATTAATGA+TGG | + | chr4.2:6696967-6696986 | MS.gene72163:CDS | 20.0% |
| ! | AACATAAGCAGTTATATGAA+AGG | + | chr4.2:6695363-6695382 | MS.gene72163:intron | 25.0% |
| ! | ACACAAGACATTATATACTA+AGG | - | chr4.2:6695424-6695443 | None:intergenic | 25.0% |
| ! | ATAAAATGACTAGCATACTA+GGG | - | chr4.2:6697081-6697100 | None:intergenic | 25.0% |
| ! | CAGTTATATGAAAGGATAAT+CGG | + | chr4.2:6695371-6695390 | MS.gene72163:intron | 25.0% |
| ! | GATTATAATGTATTTCACAC+CGG | + | chr4.2:6697203-6697222 | MS.gene72163:intron | 25.0% |
| ! | TAATCAAGATCAACAAGATA+TGG | + | chr4.2:6696106-6696125 | MS.gene72163:CDS | 25.0% |
| ! | TACTTAATAACACACTTTGT+AGG | + | chr4.2:6697646-6697665 | MS.gene72163:intron | 25.0% |
| ! | TATAAAATGACTAGCATACT+AGG | - | chr4.2:6697082-6697101 | None:intergenic | 25.0% |
| ! | TCATAGAGATTAGAAGAAAT+AGG | - | chr4.2:6696771-6696790 | None:intergenic | 25.0% |
| ! | TGAGTATATTATGAGATACT+GGG | + | chr4.2:6697029-6697048 | MS.gene72163:intron | 25.0% |
| ! | TTAATTATTTGCATTCCAGA+TGG | + | chr4.2:6696840-6696859 | MS.gene72163:intron | 25.0% |
| ! | TTGTTGAATACTAGATTCAT+GGG | + | chr4.2:6697141-6697160 | MS.gene72163:intron | 25.0% |
| !! | GTAAATTTTTGAATGTGTGA+AGG | + | chr4.2:6696684-6696703 | MS.gene72163:intron | 25.0% |
| !! | TTTTCACAAATTCTCCTTTA+TGG | - | chr4.2:6695211-6695230 | None:intergenic | 25.0% |
| !!! | AGATGTTGATTTTCATTTGT+AGG | + | chr4.2:6697281-6697300 | MS.gene72163:intron | 25.0% |
| !!! | GTATATTTTGGATTCTAACT+TGG | + | chr4.2:6695471-6695490 | MS.gene72163:intron | 25.0% |
| !!! | GTTGTTTTTATATGCCATAA+AGG | + | chr4.2:6695194-6695213 | MS.gene72163:intron | 25.0% |
| !!! | TATTGAAAATGTTGTTTCCA+AGG | + | chr4.2:6696208-6696227 | MS.gene72163:CDS | 25.0% |
| AATAAGCTGAAAACGAGTTA+TGG | - | chr4.2:6695007-6695026 | None:intergenic | 30.0% | |
| AATGACATTAGTACTTGTGT+AGG | + | chr4.2:6694951-6694970 | MS.gene72163:intron | 30.0% | |
| ACAGGTGATCTATAATAACA+CGG | - | chr4.2:6696650-6696669 | None:intergenic | 30.0% | |
| ATATCATCCCATCTTGTAAA+TGG | - | chr4.2:6697336-6697355 | None:intergenic | 30.0% | |
| ATCTTGTTGATCTTGATTAC+TGG | - | chr4.2:6696105-6696124 | None:intergenic | 30.0% | |
| CAATGACATAGTAAATCACT+CGG | + | chr4.2:6696403-6696422 | MS.gene72163:CDS | 30.0% | |
| CATTGCTCTAACTTATACTT+TGG | + | chr4.2:6695587-6695606 | MS.gene72163:CDS | 30.0% | |
| CCTAAGTTATTTATCCAAAC+AGG | + | chr4.2:6695397-6695416 | MS.gene72163:intron | 30.0% | |
| CCTGTTTGGATAAATAACTT+AGG | - | chr4.2:6695400-6695419 | None:intergenic | 30.0% | |
| GATATGGAAGAAAACATTGA+TGG | + | chr4.2:6696122-6696141 | MS.gene72163:CDS | 30.0% | |
| GGTTAAACCATTTACAAGAT+GGG | + | chr4.2:6697326-6697345 | MS.gene72163:intron | 30.0% | |
| GTGAGTATATTATGAGATAC+TGG | + | chr4.2:6697028-6697047 | MS.gene72163:intron | 30.0% | |
| GTTGTTGAATACTAGATTCA+TGG | + | chr4.2:6697140-6697159 | MS.gene72163:intron | 30.0% | |
| TAAAATGACTAGCATACTAG+GGG | - | chr4.2:6697080-6697099 | None:intergenic | 30.0% | |
| TGGTTAAACCATTTACAAGA+TGG | + | chr4.2:6697325-6697344 | MS.gene72163:intron | 30.0% | |
| TTATATACTAAGGTCCTGTT+TGG | - | chr4.2:6695414-6695433 | None:intergenic | 30.0% | |
| !! | AGCTATTCTAAAGAGTTTTC+AGG | - | chr4.2:6695030-6695049 | None:intergenic | 30.0% |
| !! | CTACTGATATAAGTTTTGTG+AGG | - | chr4.2:6695294-6695313 | None:intergenic | 30.0% |
| !!! | TGGAACTCTTTTTTACCATT+GGG | + | chr4.2:6695491-6695510 | MS.gene72163:intron | 30.0% |
| !!! | TTGGAACTCTTTTTTACCAT+TGG | + | chr4.2:6695490-6695509 | MS.gene72163:intron | 30.0% |
| AAAAGGGATACCTTTGTTGA+TGG | - | chr4.2:6694906-6694925 | None:intergenic | 35.0% | |
| AAACACACAAACAACCTTGT+TGG | - | chr4.2:6697529-6697548 | None:intergenic | 35.0% | |
| AAATTTGCACTGCTATCTTC+AGG | - | chr4.2:6696353-6696372 | None:intergenic | 35.0% | |
| AATAGCATATTGTGCTTCGT+AGG | - | chr4.2:6696800-6696819 | None:intergenic | 35.0% | |
| AGATGATAAGACTTCAAACC+TGG | + | chr4.2:6696157-6696176 | MS.gene72163:CDS | 35.0% | |
| ATACATGCAGAGAACAATGA+CGG | + | chr4.2:6696239-6696258 | MS.gene72163:CDS | 35.0% | |
| ATCAGATCTTATATCTCTCC+AGG | - | chr4.2:6697230-6697249 | None:intergenic | 35.0% | |
| ATCTTTGTCTGAATCTACTG+TGG | + | chr4.2:6696502-6696521 | MS.gene72163:CDS | 35.0% | |
| CAGAATGTTCTTCTCCAAAT+GGG | + | chr4.2:6696551-6696570 | MS.gene72163:CDS | 35.0% | |
| CATCTATCTAAGAGAACTTG+CGG | - | chr4.2:6697266-6697285 | None:intergenic | 35.0% | |
| GATAAACATTGAAGGGAAGA+TGG | + | chr4.2:6695947-6695966 | MS.gene72163:CDS | 35.0% | |
| GCTGTCACTGTTAATGAAAA+TGG | + | chr4.2:6696956-6696975 | MS.gene72163:CDS | 35.0% | |
| TATGCTTCTCATCATCACTT+TGG | - | chr4.2:6696190-6696209 | None:intergenic | 35.0% | |
| TGAAACTCTTCCAGAAATTC+CGG | + | chr4.2:6695866-6695885 | MS.gene72163:CDS | 35.0% | |
| TGAAGATAGCAGTGCAAATT+TGG | + | chr4.2:6696352-6696371 | MS.gene72163:CDS | 35.0% | |
| TGCAAACAGTAAATGTGAAG+AGG | + | chr4.2:6695658-6695677 | MS.gene72163:CDS | 35.0% | |
| TGCATGTATCATATCATCCT+TGG | - | chr4.2:6696228-6696247 | None:intergenic | 35.0% | |
| TGCTCTAACTTATACTTTGG+AGG | + | chr4.2:6695590-6695609 | MS.gene72163:CDS | 35.0% | |
| TTACTTCAAATAGCAAGGAC+AGG | - | chr4.2:6696668-6696687 | None:intergenic | 35.0% | |
| TTCACATTTACTGTTTGCAC+AGG | - | chr4.2:6695657-6695676 | None:intergenic | 35.0% | |
| TTCACTGTTACTGCTGAAAT+TGG | + | chr4.2:6696884-6696903 | MS.gene72163:CDS | 35.0% | |
| ! | AGGATTTTCTGTCCAAAATG+CGG | + | chr4.2:6696908-6696927 | MS.gene72163:CDS | 35.0% |
| ! | TCCATGGTTTGGATATCAAA+GGG | - | chr4.2:6694869-6694888 | None:intergenic | 35.0% |
| ! | TGTTAGTTGTCAAGTTTGCT+AGG | + | chr4.2:6695520-6695539 | MS.gene72163:intron | 35.0% |
| ! | TTCCATGGTTTGGATATCAA+AGG | - | chr4.2:6694870-6694889 | None:intergenic | 35.0% |
| !! | ATACCTTTGTTGATGGATTC+AGG | - | chr4.2:6694899-6694918 | None:intergenic | 35.0% |
| !! | GTTAGTTGTCAAGTTTGCTA+GGG | + | chr4.2:6695521-6695540 | MS.gene72163:intron | 35.0% |
| !! | TAAGTTTTGTGAGGCTGTTT+TGG | - | chr4.2:6695285-6695304 | None:intergenic | 35.0% |
| !! | TACCTTTGTTGATGGATTCA+GGG | - | chr4.2:6694898-6694917 | None:intergenic | 35.0% |
| !! | TTCTAAAAGTGCTTATGAGC+TGG | - | chr4.2:6695342-6695361 | None:intergenic | 35.0% |
| !!! | TCTTTTTTACCATTGGGATG+TGG | + | chr4.2:6695497-6695516 | MS.gene72163:intron | 35.0% |
| !!! | TTGGCTTTCTTCCTTGTTTT+AGG | - | chr4.2:6697510-6697529 | None:intergenic | 35.0% |
| AACAAGGAAGAAAGCCAACA+AGG | + | chr4.2:6697512-6697531 | MS.gene72163:CDS | 40.0% | |
| AACGAGTTCTTTCAGTCACT+TGG | + | chr4.2:6697106-6697125 | MS.gene72163:intron | 40.0% | |
| AAGGAGATCCCTTAGAATTG+TGG | - | chr4.2:6697709-6697728 | None:intergenic | 40.0% | |
| ACATTTACTGTTTGCACAGG+AGG | - | chr4.2:6695654-6695673 | None:intergenic | 40.0% | |
| ACCAGCTTCAATAACAGCAT+TGG | - | chr4.2:6694750-6694769 | None:intergenic | 40.0% | |
| ACCTCAGATTGATCATCTTG+AGG | - | chr4.2:6695825-6695844 | None:intergenic | 40.0% | |
| ACGAATCTCCTCCATAACTT+CGG | - | chr4.2:6694813-6694832 | None:intergenic | 40.0% | |
| ACGAGTTATGGACATGTCAT+AGG | - | chr4.2:6694995-6695014 | None:intergenic | 40.0% | |
| AGCATCTTCCAAAACCTGTT+GGG | - | chr4.2:6694690-6694709 | None:intergenic | 40.0% | |
| AGTTACATTACGTGGCACAA+GGG | + | chr4.2:6697006-6697025 | MS.gene72163:CDS | 40.0% | |
| ATCGGAATTTGCATTGTCCT+CGG | - | chr4.2:6695760-6695779 | None:intergenic | 40.0% | |
| ATCTTATATCTCTCCAGGAC+CGG | - | chr4.2:6697225-6697244 | None:intergenic | 40.0% | |
| ATGACACTTGAGTATCCATC+TGG | - | chr4.2:6696858-6696877 | None:intergenic | 40.0% | |
| ATGTGCCTAATTTGGAAGAG+TGG | + | chr4.2:6695715-6695734 | MS.gene72163:CDS | 40.0% | |
| CAGAGGAAGGATTCTTGAAT+CGG | - | chr4.2:6695778-6695797 | None:intergenic | 40.0% | |
| CGTGAGTAGTGATTGTCATT+TGG | - | chr4.2:6697782-6697801 | None:intergenic | 40.0% | |
| CTGTTACTGCTGAAATTGGA+AGG | + | chr4.2:6696888-6696907 | MS.gene72163:CDS | 40.0% | |
| GAAAGCTTATGACGAGAAAC+AGG | - | chr4.2:6694839-6694858 | None:intergenic | 40.0% | |
| GAGCATTAGCAACTTTCAGT+GGG | + | chr4.2:6697747-6697766 | MS.gene72163:CDS | 40.0% | |
| GATGGAATTGATGCATCTCA+AGG | + | chr4.2:6695975-6695994 | MS.gene72163:CDS | 40.0% | |
| GCAGAATGTTCTTCTCCAAA+TGG | + | chr4.2:6696550-6696569 | MS.gene72163:CDS | 40.0% | |
| GGGTACTTCATCCTAAAACA+AGG | + | chr4.2:6697496-6697515 | MS.gene72163:CDS | 40.0% | |
| GGGTTTGAATGTGCCTAATT+TGG | + | chr4.2:6695707-6695726 | MS.gene72163:CDS | 40.0% | |
| GTAACAATTACCTGTGCAAC+TGG | - | chr4.2:6696613-6696632 | None:intergenic | 40.0% | |
| TCACGGAACAAAACATCTCA+GGG | + | chr4.2:6695620-6695639 | MS.gene72163:CDS | 40.0% | |
| TCCCTTTGATATCCAAACCA+TGG | + | chr4.2:6694865-6694884 | MS.gene72163:CDS | 40.0% | |
| TCCTCAAGATGATCAATCTG+AGG | + | chr4.2:6695821-6695840 | MS.gene72163:CDS | 40.0% | |
| TGAAGATCAACTGCCTCAAA+GGG | + | chr4.2:6697476-6697495 | MS.gene72163:CDS | 40.0% | |
| TGCAAAGTCACCAGTTATAC+AGG | - | chr4.2:6696528-6696547 | None:intergenic | 40.0% | |
| TGTGCCTAATTTGGAAGAGT+GGG | + | chr4.2:6695716-6695735 | MS.gene72163:CDS | 40.0% | |
| TTCACGGAACAAAACATCTC+AGG | + | chr4.2:6695619-6695638 | MS.gene72163:CDS | 40.0% | |
| TTCAGCCACCACAATTCTAA+GGG | + | chr4.2:6697698-6697717 | MS.gene72163:CDS | 40.0% | |
| TTCTCATTGCCTTTACCTCA+AGG | + | chr4.2:6697417-6697436 | MS.gene72163:CDS | 40.0% | |
| TTCTGTCCAAAATGCGGAAA+TGG | + | chr4.2:6696914-6696933 | MS.gene72163:CDS | 40.0% | |
| ! | AAAGTGCTTATGAGCTGGTT+TGG | - | chr4.2:6695337-6695356 | None:intergenic | 40.0% |
| ! | AAGCAGATAACTCTGGAAGA+AGG | + | chr4.2:6696284-6696303 | MS.gene72163:CDS | 40.0% |
| ! | AGAGCATTAGCAACTTTCAG+TGG | + | chr4.2:6697746-6697765 | MS.gene72163:CDS | 40.0% |
| ! | CAAGATGATCAATCTGAGGT+TGG | + | chr4.2:6695825-6695844 | MS.gene72163:CDS | 40.0% |
| ! | TGATCAATCTGAGGTTGGTT+CGG | + | chr4.2:6695830-6695849 | MS.gene72163:CDS | 40.0% |
| ! | TGGTTTGGATATCAAAGGGA+AGG | - | chr4.2:6694865-6694884 | None:intergenic | 40.0% |
| ! | TGTTTCTGTTCCCGAAGTTA+TGG | + | chr4.2:6694799-6694818 | MS.gene72163:CDS | 40.0% |
| ! | TTAGGATGAAGTACCCTTTG+AGG | - | chr4.2:6697492-6697511 | None:intergenic | 40.0% |
| ! | TTGATGACAATGGAGGTGAT+TGG | + | chr4.2:6696003-6696022 | MS.gene72163:CDS | 40.0% |
| ! | TTTGAGGCAGTTGATCTTCA+CGG | - | chr4.2:6697476-6697495 | None:intergenic | 40.0% |
| ! | TTTGCAAACCCAACAGGTTT+TGG | + | chr4.2:6694679-6694698 | MS.gene72163:CDS | 40.0% |
| !! | AACTCTGAAGCAGATAACTC+TGG | + | chr4.2:6696277-6696296 | MS.gene72163:CDS | 40.0% |
| !! | ACCTTTGTTGATGGATTCAG+GGG | - | chr4.2:6694897-6694916 | None:intergenic | 40.0% |
| !! | CAAGGACAAGTTGATGACAA+TGG | + | chr4.2:6695993-6696012 | MS.gene72163:CDS | 40.0% |
| AAAGAACACCACACTCTCGT+GGG | - | chr4.2:6697579-6697598 | None:intergenic | 45.0% | |
| AAGCATCCAACTTTGCTCAC+TGG | - | chr4.2:6696480-6696499 | None:intergenic | 45.0% | |
| AATGTATTTCACACCGGTCC+TGG | + | chr4.2:6697209-6697228 | MS.gene72163:intron | 45.0% | |
| ACCCCTGAATCCATCAACAA+AGG | + | chr4.2:6694893-6694912 | MS.gene72163:CDS | 45.0% | |
| ACCTGTTGGGTTTGCAAAAG+TGG | - | chr4.2:6694677-6694696 | None:intergenic | 45.0% | |
| AGTTGCTAATGCTCTCCTGA+CGG | - | chr4.2:6697741-6697760 | None:intergenic | 45.0% | |
| ATGATGCCAGTGAGCAAAGT+TGG | + | chr4.2:6696471-6696490 | MS.gene72163:CDS | 45.0% | |
| CAACTAACACCACATCCCAA+TGG | - | chr4.2:6695509-6695528 | None:intergenic | 45.0% | |
| CAGCAACAGAGATACCATGA+CGG | - | chr4.2:6694718-6694737 | None:intergenic | 45.0% | |
| CGAATCTCCTCCATAACTTC+GGG | - | chr4.2:6694812-6694831 | None:intergenic | 45.0% | |
| CTATCTTCAGGAGACAGACT+TGG | - | chr4.2:6696341-6696360 | None:intergenic | 45.0% | |
| CTTCAGCCACCACAATTCTA+AGG | + | chr4.2:6697697-6697716 | MS.gene72163:CDS | 45.0% | |
| GAAGCTGGTGAAAAGCTTCA+TGG | + | chr4.2:6694761-6694780 | MS.gene72163:CDS | 45.0% | |
| GAGATCCCTTAGAATTGTGG+TGG | - | chr4.2:6697706-6697725 | None:intergenic | 45.0% | |
| GAGCATCTTCCAAAACCTGT+TGG | - | chr4.2:6694691-6694710 | None:intergenic | 45.0% | |
| GAGTTACATTACGTGGCACA+AGG | + | chr4.2:6697005-6697024 | MS.gene72163:CDS | 45.0% | |
| GCCAATGCTGTTATTGAAGC+TGG | + | chr4.2:6694746-6694765 | MS.gene72163:CDS | 45.0% | |
| GCTTCCCACTCTTCCAAATT+AGG | - | chr4.2:6695723-6695742 | None:intergenic | 45.0% | |
| GTAATGTAACTCGAGGTCGA+CGG | - | chr4.2:6696997-6697016 | None:intergenic | 45.0% | |
| GTAGGACGACGACTTCTATA+TGG | + | chr4.2:6697664-6697683 | MS.gene72163:intron | 45.0% | |
| GTGAAGATCAACTGCCTCAA+AGG | + | chr4.2:6697475-6697494 | MS.gene72163:CDS | 45.0% | |
| TAAAGAACACCACACTCTCG+TGG | - | chr4.2:6697580-6697599 | None:intergenic | 45.0% | |
| TAATGTAACTCGAGGTCGAC+GGG | - | chr4.2:6696996-6697015 | None:intergenic | 45.0% | |
| TCATCACTCTCCGGAATTTC+TGG | - | chr4.2:6695879-6695898 | None:intergenic | 45.0% | |
| TCATTGCCTTTACCTCAAGG+TGG | + | chr4.2:6697420-6697439 | MS.gene72163:CDS | 45.0% | |
| TCTACTGTGGCCTGTATAAC+TGG | + | chr4.2:6696515-6696534 | MS.gene72163:CDS | 45.0% | |
| TGTCCAAAATGCGGAAATGG+TGG | + | chr4.2:6696917-6696936 | MS.gene72163:CDS | 45.0% | |
| TGTTGGGTTTGCAAAAGTGG+TGG | - | chr4.2:6694674-6694693 | None:intergenic | 45.0% | |
| TTACTGTTTGCACAGGAGGT+GGG | - | chr4.2:6695650-6695669 | None:intergenic | 45.0% | |
| TTCAAACTCAAGTCCTGCAG+AGG | - | chr4.2:6695795-6695814 | None:intergenic | 45.0% | |
| TTCAAGAATCCTTCCTCTGC+AGG | + | chr4.2:6695779-6695798 | MS.gene72163:CDS | 45.0% | |
| TTCAGCAGTAACAGTGAAGC+AGG | - | chr4.2:6696882-6696901 | None:intergenic | 45.0% | |
| TTCTGTTCCCGAAGTTATGG+AGG | + | chr4.2:6694802-6694821 | MS.gene72163:CDS | 45.0% | |
| TTTACTGTTTGCACAGGAGG+TGG | - | chr4.2:6695651-6695670 | None:intergenic | 45.0% | |
| ! | ACTTTGGAGGCTCAGATTCA+CGG | + | chr4.2:6695603-6695622 | MS.gene72163:CDS | 45.0% |
| ! | TTTGGAAGAGTGGGAAGCAT+TGG | + | chr4.2:6695725-6695744 | MS.gene72163:CDS | 45.0% |
| !! | AAAAGTGGTGGTGGTTGTTG+AGG | - | chr4.2:6694662-6694681 | None:intergenic | 45.0% |
| !! | AAGAACCAAAAGCATCGTGC+TGG | + | chr4.2:6694606-6694625 | MS.gene72163:CDS | 45.0% |
| !! | ACCACTTTTGCAAACCCAAC+AGG | + | chr4.2:6694673-6694692 | MS.gene72163:CDS | 45.0% |
| !! | GCTTATGAGCTGGTTTGGAT+TGG | - | chr4.2:6695332-6695351 | None:intergenic | 45.0% |
| !! | GGACAAGTTGATGACAATGG+AGG | + | chr4.2:6695996-6696015 | MS.gene72163:CDS | 45.0% |
| !! | GTCAAGTTTGCTAGGGTTAC+TGG | + | chr4.2:6695528-6695547 | MS.gene72163:CDS | 45.0% |
| !! | TTGTTGATGGATTCAGGGGT+TGG | - | chr4.2:6694893-6694912 | None:intergenic | 45.0% |
| !! | TAATTAATAAATAATAGATT+TGG | + | chr4.2:6697174-6697193 | MS.gene72163:intron | 5.0% |
| !! | TTTATTTATTAATTAATGTT+TGG | + | chr4.2:6695082-6695101 | MS.gene72163:intron | 5.0% |
| AAATGGTGGCACCTTGAGGA+AGG | + | chr4.2:6696931-6696950 | MS.gene72163:CDS | 50.0% | |
| AACTCAAGTCCTGCAGAGGA+AGG | - | chr4.2:6695791-6695810 | None:intergenic | 50.0% | |
| AGTGACAGCTACCTTCCTCA+AGG | - | chr4.2:6696945-6696964 | None:intergenic | 50.0% | |
| ATGAACGTGGCGGTTCAATG+AGG | + | chr4.2:6695895-6695914 | MS.gene72163:CDS | 50.0% | |
| ATTCCGGAGAGTGATGAACG+TGG | + | chr4.2:6695882-6695901 | MS.gene72163:CDS | 50.0% | |
| CACAGATACACCAGTTGCAC+AGG | + | chr4.2:6696600-6696619 | MS.gene72163:CDS | 50.0% | |
| CATCAGCAGCTTCACTTGAC+TGG | - | chr4.2:6696439-6696458 | None:intergenic | 50.0% | |
| CGACCTCGAGTTACATTACG+TGG | + | chr4.2:6696998-6697017 | MS.gene72163:CDS | 50.0% | |
| CTGCTTCAGAGTTGCAGAGA+GGG | - | chr4.2:6696270-6696289 | None:intergenic | 50.0% | |
| CTGGAGTAGCGTAGTGAAGA+AGG | + | chr4.2:6694625-6694644 | MS.gene72163:CDS | 50.0% | |
| CTGTCAGTCGTAGTACTCAC+AGG | + | chr4.2:6696033-6696052 | MS.gene72163:CDS | 50.0% | |
| GAAGATGCTCGTAACCGTCA+TGG | + | chr4.2:6694701-6694720 | MS.gene72163:CDS | 50.0% | |
| GAAGGGAAGATGGTTGCTGA+TGG | + | chr4.2:6695957-6695976 | MS.gene72163:CDS | 50.0% | |
| GAGTAGCGTAGTGAAGAAGG+AGG | + | chr4.2:6694628-6694647 | MS.gene72163:CDS | 50.0% | |
| GCCTTTACCTCAAGGTGGAA+GGG | + | chr4.2:6697425-6697444 | MS.gene72163:CDS | 50.0% | |
| GGACGACGACTTCTATATGG+TGG | + | chr4.2:6697667-6697686 | MS.gene72163:intron | 50.0% | |
| GTGCCACGTAATGTAACTCG+AGG | - | chr4.2:6697004-6697023 | None:intergenic | 50.0% | |
| GTTGCTAATGCTCTCCTGAC+GGG | - | chr4.2:6697740-6697759 | None:intergenic | 50.0% | |
| TCCCTTCCACCTTGAGGTAA+AGG | - | chr4.2:6697429-6697448 | None:intergenic | 50.0% | |
| TCTGCTTCAGAGTTGCAGAG+AGG | - | chr4.2:6696271-6696290 | None:intergenic | 50.0% | |
| TGAGTACTACGACTGACAGC+AGG | - | chr4.2:6696032-6696051 | None:intergenic | 50.0% | |
| TGCCTTTACCTCAAGGTGGA+AGG | + | chr4.2:6697424-6697443 | MS.gene72163:CDS | 50.0% | |
| TGGGTTTGCAAAAGTGGTGG+TGG | - | chr4.2:6694671-6694690 | None:intergenic | 50.0% | |
| TGGTGTATCTGTGATCCTCC+AGG | - | chr4.2:6696593-6696612 | None:intergenic | 50.0% | |
| TGTGAAGAGGTTGCCTGAGA+AGG | + | chr4.2:6695671-6695690 | MS.gene72163:CDS | 50.0% | |
| ! | AGCATTGGAACAGGAAACCG+AGG | + | chr4.2:6695740-6695759 | MS.gene72163:CDS | 50.0% |
| ! | CATCACTTTGGTGCACATCC+AGG | - | chr4.2:6696178-6696197 | None:intergenic | 50.0% |
| ! | CTACTCCAGCACGATGCTTT+TGG | - | chr4.2:6694614-6694633 | None:intergenic | 50.0% |
| ! | GTGCCACCATTTCCGCATTT+TGG | - | chr4.2:6696923-6696942 | None:intergenic | 50.0% |
| !! | AGAGTGGGAAGCATTGGAAC+AGG | + | chr4.2:6695731-6695750 | MS.gene72163:CDS | 50.0% |
| ACTGCATCCCTTCCACCTTG+AGG | - | chr4.2:6697435-6697454 | None:intergenic | 55.0% | |
| CCAGCAAGCGCAAACCCATT+TGG | - | chr4.2:6696568-6696587 | None:intergenic | 55.0% | |
| GGCACATTCAAACCCCATCC+CGG | - | chr4.2:6695702-6695721 | None:intergenic | 55.0% | |
| GTTGCCTGAGAAGGACATGC+CGG | + | chr4.2:6695680-6695699 | MS.gene72163:CDS | 55.0% | |
| TGAGAAGGACATGCCGGGAT+GGG | + | chr4.2:6695686-6695705 | MS.gene72163:CDS | 55.0% | |
| TTGCCTGAGAAGGACATGCC+GGG | + | chr4.2:6695681-6695700 | MS.gene72163:CDS | 55.0% | |
| ! | CCAAATGGGTTTGCGCTTGC+TGG | + | chr4.2:6696565-6696584 | MS.gene72163:CDS | 55.0% |
| !! | AGTGGTGGTGGTTGTTGAGG+TGG | - | chr4.2:6694659-6694678 | None:intergenic | 55.0% |
| !! | CAGGGGTTGGTTCCATGGTT+TGG | - | chr4.2:6694880-6694899 | None:intergenic | 55.0% |
| !! | GGATTCAGGGGTTGGTTCCA+TGG | - | chr4.2:6694885-6694904 | None:intergenic | 55.0% |
| CATCCCGGCATGTCCTTCTC+AGG | - | chr4.2:6695687-6695706 | None:intergenic | 60.0% | |
| CCGCCACGTTCATCACTCTC+CGG | - | chr4.2:6695888-6695907 | None:intergenic | 60.0% | |
| CCGGAGAGTGATGAACGTGG+CGG | + | chr4.2:6695885-6695904 | MS.gene72163:CDS | 60.0% | |
| CTGAGAAGGACATGCCGGGA+TGG | + | chr4.2:6695685-6695704 | MS.gene72163:CDS | 60.0% | |
| GAGAAGGACATGCCGGGATG+GGG | + | chr4.2:6695687-6695706 | MS.gene72163:CDS | 60.0% | |
| GCGGAAATGGTGGCACCTTG+AGG | + | chr4.2:6696927-6696946 | MS.gene72163:CDS | 60.0% | |
| GCTAATGCTCTCCTGACGGG+AGG | - | chr4.2:6697737-6697756 | None:intergenic | 60.0% | |
| GGTCGTTTCCCACGAGAGTG+TGG | + | chr4.2:6697568-6697587 | MS.gene72163:intron | 60.0% | |
| ! | GGTGGTGGTTGTTGAGGTGG+CGG | - | chr4.2:6694656-6694675 | None:intergenic | 60.0% |
| ATGCTCTCCTGACGGGAGGC+TGG | - | chr4.2:6697733-6697752 | None:intergenic | 65.0% | |
| CTCCTGACGGGAGGCTGGAA+AGG | - | chr4.2:6697728-6697747 | None:intergenic | 65.0% | |
| CTCCTTTCCAGCCTCCCGTC+AGG | + | chr4.2:6697723-6697742 | MS.gene72163:CDS | 65.0% | |
| ! | GGTTTGCGCTTGCTGGCACC+TGG | + | chr4.2:6696572-6696591 | MS.gene72163:CDS | 65.0% |
| ! | TTGCGCTTGCTGGCACCTGG+AGG | + | chr4.2:6696575-6696594 | MS.gene72163:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6694602 | 6697814 | 6694602 | ID=MS.gene72163 |
| chr4.2 | mRNA | 6694602 | 6697814 | 6694602 | ID=MS.gene72163.t1;Parent=MS.gene72163 |
| chr4.2 | exon | 6694602 | 6694914 | 6694602 | ID=MS.gene72163.t1.exon1;Parent=MS.gene72163.t1 |
| chr4.2 | CDS | 6694602 | 6694914 | 6694602 | ID=cds.MS.gene72163.t1;Parent=MS.gene72163.t1 |
| chr4.2 | exon | 6695526 | 6696621 | 6695526 | ID=MS.gene72163.t1.exon2;Parent=MS.gene72163.t1 |
| chr4.2 | CDS | 6695526 | 6696621 | 6695526 | ID=cds.MS.gene72163.t1;Parent=MS.gene72163.t1 |
| chr4.2 | exon | 6696859 | 6697027 | 6696859 | ID=MS.gene72163.t1.exon3;Parent=MS.gene72163.t1 |
| chr4.2 | CDS | 6696859 | 6697027 | 6696859 | ID=cds.MS.gene72163.t1;Parent=MS.gene72163.t1 |
| chr4.2 | exon | 6697417 | 6697533 | 6697417 | ID=MS.gene72163.t1.exon4;Parent=MS.gene72163.t1 |
| chr4.2 | CDS | 6697417 | 6697533 | 6697417 | ID=cds.MS.gene72163.t1;Parent=MS.gene72163.t1 |
| chr4.2 | exon | 6697668 | 6697814 | 6697668 | ID=MS.gene72163.t1.exon5;Parent=MS.gene72163.t1 |
| chr4.2 | CDS | 6697668 | 6697814 | 6697668 | ID=cds.MS.gene72163.t1;Parent=MS.gene72163.t1 |
| Gene Sequence |
| Protein sequence |
