Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070323.t1 | XP_003630534.1 | 97.7 | 613 | 14 | 0 | 1 | 613 | 1 | 613 | 0.00E+00 | 1131.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070323.t1 | Q5RBB3 | 25.8 | 523 | 213 | 12 | 46 | 564 | 8 | 359 | 4.4e-27 | 124.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070323.t1 | G7LI13 | 97.7 | 613 | 14 | 0 | 1 | 613 | 1 | 613 | 0.0e+00 | 1131.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070323.t1 | MTR_8g098490 | 97.716 | 613 | 14 | 0 | 1 | 613 | 1 | 613 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070323.t1 | AT5G41190 | 55.272 | 626 | 237 | 10 | 1 | 610 | 1 | 599 | 0.0 | 674 |
Find 163 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCCGCCATTTCCGCATTT+TGG | 0.159935 | 4.1:+6029174 | None:intergenic |
| ATACCTTTGTTGATGGATTC+AGG | 0.182849 | 4.1:+6031187 | None:intergenic |
| TCATCACTCTCCGGAATTTC+CGG | 0.192791 | 4.1:+6030218 | None:intergenic |
| CCAAATGGGTTTGCGCTTGC+TGG | 0.207884 | 4.1:-6029529 | MS.gene070323:CDS |
| TGAAGATAGCAGTGCAAATT+TGG | 0.219331 | 4.1:-6029742 | MS.gene070323:CDS |
| GCTTCCCACTCTTCCAAATT+AGG | 0.241820 | 4.1:+6030374 | None:intergenic |
| GTCAAGTTTGCTAGGGTTAC+TGG | 0.249525 | 4.1:-6030566 | MS.gene070323:CDS |
| ATCTTGTTGATCTTGATTAC+TGG | 0.256732 | 4.1:+6029992 | None:intergenic |
| TTTGCAAACCGAACAGGTTT+TGG | 0.271880 | 4.1:-6031404 | MS.gene070323:CDS |
| GGGTTTGAATGTGCCTAATT+TGG | 0.276019 | 4.1:-6030387 | MS.gene070323:CDS |
| TTCACTGTTACTGCTGAAAT+TGG | 0.291257 | 4.1:-6029210 | MS.gene070323:CDS |
| CTACTCCAGCACGATGCTTT+TGG | 0.301824 | 4.1:+6031472 | None:intergenic |
| CATTGCTCTAACTTATACTT+TGG | 0.301873 | 4.1:-6030507 | MS.gene070323:CDS |
| CAGGGGTTGGTTCCATGGTT+TGG | 0.303048 | 4.1:+6031206 | None:intergenic |
| GCTGTCACTGTTAATGAAAA+TGG | 0.309540 | 4.1:-6029138 | MS.gene070323:CDS |
| CTTCAGCCACCACAATTCTA+AGG | 0.325731 | 4.1:-6028399 | MS.gene070323:CDS |
| AAATGGGATACCTTTGTTGA+TGG | 0.335568 | 4.1:+6031180 | None:intergenic |
| GTAGGACGACGACTTCTATA+TGG | 0.345158 | 4.1:-6028432 | MS.gene070323:intron |
| CGCGAGTAGTGATTGTCATT+TGG | 0.353362 | 4.1:+6028317 | None:intergenic |
| TGAAACTCTTCCGGAAATTC+CGG | 0.357767 | 4.1:-6030228 | MS.gene070323:CDS |
| TTCTGTCCAAAATGCGGAAA+TGG | 0.367588 | 4.1:-6029180 | MS.gene070323:CDS |
| AAACACACAAACAACCTTGT+TGG | 0.376229 | 4.1:+6028568 | None:intergenic |
| CATCAGCAGCTTCACTTGAC+TGG | 0.379113 | 4.1:+6029658 | None:intergenic |
| TAATCAAGATCAACAAGATA+TGG | 0.384551 | 4.1:-6029988 | MS.gene070323:CDS |
| ACCTGTTCGGTTTGCAAAAG+AGG | 0.385898 | 4.1:+6031409 | None:intergenic |
| TCTACTGTGGCCTGTATAAC+TGG | 0.386129 | 4.1:-6029579 | MS.gene070323:CDS |
| GCAGAATGTTCTTCTCCAAA+TGG | 0.387712 | 4.1:-6029544 | MS.gene070323:CDS |
| CCAGCAAGCGCAAACCCATT+TGG | 0.393658 | 4.1:+6029529 | None:intergenic |
| GGATTCAGGGGTTGGTTCCA+TGG | 0.393846 | 4.1:+6031201 | None:intergenic |
| GAAAGCTTATGACGAGAAAC+AGG | 0.404878 | 4.1:+6031247 | None:intergenic |
| TGCAAAGTCACCAGTTATAC+AGG | 0.407508 | 4.1:+6029569 | None:intergenic |
| CAGAATGTTCTTCTCCAAAT+GGG | 0.409413 | 4.1:-6029543 | MS.gene070323:CDS |
| TACCTTTGTTGATGGATTCA+GGG | 0.415644 | 4.1:+6031188 | None:intergenic |
| GGTTTGCGCTTGCTGGCACC+TGG | 0.419244 | 4.1:-6029522 | MS.gene070323:CDS |
| TGTTTCTGCTCCCGAAGTTA+TGG | 0.420100 | 4.1:-6031284 | MS.gene070323:CDS |
| TGGTAGTTGTCAAGTTTGCT+AGG | 0.423517 | 4.1:-6030574 | MS.gene070323:intron |
| ATGCTCTCCTGACGGGAGGC+TGG | 0.424797 | 4.1:+6028366 | None:intergenic |
| GCATACTGCTGAAACTCTTC+CGG | 0.427835 | 4.1:-6030237 | MS.gene070323:CDS |
| TGCTCTAACTTATACTTTGG+AGG | 0.431975 | 4.1:-6030504 | MS.gene070323:CDS |
| TTCAAGAATCCTTCCTCTGC+AGG | 0.435157 | 4.1:-6030315 | MS.gene070323:CDS |
| CATCCCGGCATGTCCTTCTC+AGG | 0.436359 | 4.1:+6030410 | None:intergenic |
| TTTGGAAGAGTGGGAAGCAT+TGG | 0.442947 | 4.1:-6030369 | MS.gene070323:CDS |
| TTCACGGAACAAAACATCTC+AGG | 0.444574 | 4.1:-6030475 | MS.gene070323:CDS |
| TCCCTTCCACCTTGAGGTAA+AGG | 0.445988 | 4.1:+6028668 | None:intergenic |
| CTCCTTTCCAGCCTCCCGTC+AGG | 0.448309 | 4.1:-6028373 | MS.gene070323:CDS |
| CATCACTTTGGTGCACATCC+AGG | 0.451839 | 4.1:+6029919 | None:intergenic |
| TTCTCATTGCCTTTACCTCA+AGG | 0.454002 | 4.1:-6028677 | MS.gene070323:CDS |
| GAAGCTGGTGAAAAGCTTCA+TGG | 0.455837 | 4.1:-6031322 | MS.gene070323:CDS |
| GTAACAATTACCTGTGCAAC+TGG | 0.456239 | 4.1:+6029484 | None:intergenic |
| CGAATCTCCTCCATAACTTC+GGG | 0.460963 | 4.1:+6031274 | None:intergenic |
| AGCATCTTCCAAAACCTGTT+CGG | 0.462532 | 4.1:+6031396 | None:intergenic |
| TGAGAAGGACATGCCGGGAT+GGG | 0.464992 | 4.1:-6030408 | MS.gene070323:CDS |
| TTGTTGATGGATTCAGGGGT+TGG | 0.465250 | 4.1:+6031193 | None:intergenic |
| TGCATGTATCATATCATCCT+TGG | 0.465343 | 4.1:+6029869 | None:intergenic |
| TTTGAGGCAGTTGATCTTCA+CGG | 0.467872 | 4.1:+6028621 | None:intergenic |
| TATTGAAAATGTTGTTTCCA+AGG | 0.469382 | 4.1:-6029886 | MS.gene070323:CDS |
| TTTACTGTTTGCACAGGAGG+TGG | 0.471720 | 4.1:+6030446 | None:intergenic |
| CAGAGGAAGGATTCTTGAAT+CGG | 0.479778 | 4.1:+6030319 | None:intergenic |
| CTGGAGTAGCGTAGTGAAGA+AGG | 0.480883 | 4.1:-6031458 | MS.gene070323:CDS |
| CTCCTGACGGGAGGCTGGAA+AGG | 0.481280 | 4.1:+6028371 | None:intergenic |
| ACTTTGGAGGCTCAGATTCA+CGG | 0.490488 | 4.1:-6030491 | MS.gene070323:CDS |
| TTCAGCAGTAACAGTGAAGC+AGG | 0.491505 | 4.1:+6029215 | None:intergenic |
| ATGATGCCAGTGAGCAAAGT+TGG | 0.492731 | 4.1:-6029623 | MS.gene070323:CDS |
| AAATTTGCACTGCTATCTTC+AGG | 0.493660 | 4.1:+6029744 | None:intergenic |
| ACCAGCTTCAATAACAGCAT+TGG | 0.494776 | 4.1:+6031336 | None:intergenic |
| GATAAACATTGAAGGGAAGA+TGG | 0.494792 | 4.1:-6030147 | MS.gene070323:CDS |
| ATCGGAATTTGCATTGTCCT+CGG | 0.495690 | 4.1:+6030337 | None:intergenic |
| CTGCTTCAGAGTTGCAGAGA+GGG | 0.496308 | 4.1:+6029827 | None:intergenic |
| CTATCTTCAGGAGACAGACT+TGG | 0.499148 | 4.1:+6029756 | None:intergenic |
| CACAGATACACCAGTTGCAC+AGG | 0.501209 | 4.1:-6029494 | MS.gene070323:intron |
| TAATGTAACTCGAGGTCGAC+GGG | 0.502431 | 4.1:+6029101 | None:intergenic |
| TGATCAATCTGAGGTTGGTT+CGG | 0.503635 | 4.1:-6030264 | MS.gene070323:CDS |
| GGTAGTTGTCAAGTTTGCTA+GGG | 0.507932 | 4.1:-6030573 | MS.gene070323:intron |
| CTGAGAAGGACATGCCGGGA+TGG | 0.508366 | 4.1:-6030409 | MS.gene070323:CDS |
| TATGCTTCTCATCATCACTT+TGG | 0.511242 | 4.1:+6029907 | None:intergenic |
| ACATTTACTGTTTGCACAGG+AGG | 0.511908 | 4.1:+6030443 | None:intergenic |
| TCCATGGTTTGGATATCAAA+GGG | 0.512366 | 4.1:+6031217 | None:intergenic |
| ACCTTTGTTGATGGATTCAG+GGG | 0.512889 | 4.1:+6031189 | None:intergenic |
| AGAGTGGGAAGCATTGGAAC+AGG | 0.513153 | 4.1:-6030363 | MS.gene070323:CDS |
| TGCCTTTACCTCAAGGTGGA+AGG | 0.513861 | 4.1:-6028670 | MS.gene070323:CDS |
| CTGTTACTGCTGAAATTGGA+AGG | 0.516329 | 4.1:-6029206 | MS.gene070323:CDS |
| GCCAATGCTGTTATTGAAGC+TGG | 0.519074 | 4.1:-6031337 | MS.gene070323:CDS |
| ACGAATCTCCTCCATAACTT+CGG | 0.520579 | 4.1:+6031273 | None:intergenic |
| GTGAAGATCAACTGCCTCAA+AGG | 0.522194 | 4.1:-6028619 | MS.gene070323:CDS |
| TTCCATGGTTTGGATATCAA+AGG | 0.530246 | 4.1:+6031216 | None:intergenic |
| GTTGCTAATGCTCTCCTGAC+GGG | 0.532845 | 4.1:+6028359 | None:intergenic |
| AAAAGAGGTGGTTGTTGTTG+AGG | 0.533440 | 4.1:+6031424 | None:intergenic |
| AAGCAGATGACTCTGGAAGA+AGG | 0.534641 | 4.1:-6029810 | MS.gene070323:CDS |
| GAGAAGGACATGCCGGGATG+GGG | 0.535504 | 4.1:-6030407 | MS.gene070323:CDS |
| TTCACATTTACTGTTTGCAC+AGG | 0.537571 | 4.1:+6030440 | None:intergenic |
| AACTCTGAAGCAGATGACTC+TGG | 0.540443 | 4.1:-6029817 | MS.gene070323:CDS |
| TGGTGTATCTGTGATCCTCC+AGG | 0.544263 | 4.1:+6029504 | None:intergenic |
| AAGCATCCAACTTTGCTCAC+TGG | 0.546095 | 4.1:+6029617 | None:intergenic |
| TGAAGATCAACTGCCTCAAA+GGG | 0.546216 | 4.1:-6028618 | MS.gene070323:CDS |
| GCCTTTACCTCAAGGTGGAA+GGG | 0.547026 | 4.1:-6028669 | MS.gene070323:CDS |
| CAGTAACAGTGAAGCAGGCA+TGG | 0.547944 | 4.1:+6029220 | None:intergenic |
| TTAGGATGAAGTACCCTTTG+AGG | 0.550596 | 4.1:+6028605 | None:intergenic |
| TGTGAAGAGGTTGCCTGAGA+AGG | 0.551471 | 4.1:-6030423 | MS.gene070323:CDS |
| AGATGATAAGACTTCAAACC+TGG | 0.551742 | 4.1:-6029937 | MS.gene070323:CDS |
| AAGAACCAAAAGCATCGTGC+TGG | 0.559027 | 4.1:-6031477 | MS.gene070323:CDS |
| TTGATGACAATGGAGATGAT+TGG | 0.561149 | 4.1:-6030091 | MS.gene070323:CDS |
| GTTGCCTGAGAAGGACATGC+CGG | 0.561370 | 4.1:-6030414 | MS.gene070323:CDS |
| CAAGATGATCAATCTGAGGT+TGG | 0.562902 | 4.1:-6030269 | MS.gene070323:CDS |
| AACTCAAGTCCTGCAGAGGA+AGG | 0.563302 | 4.1:+6030306 | None:intergenic |
| GGCACATTCAAACCCCATCC+CGG | 0.567117 | 4.1:+6030395 | None:intergenic |
| AGAGCATTAGCAACTTTCAG+TGG | 0.569217 | 4.1:-6028350 | MS.gene070323:CDS |
| TTACTGTTTGCACAGGAGGT+GGG | 0.570348 | 4.1:+6030447 | None:intergenic |
| GAGCATTAGCAACTTTCAGT+GGG | 0.573278 | 4.1:-6028349 | MS.gene070323:CDS |
| CTGTCAGTCGTAGTACTCAC+AGG | 0.574410 | 4.1:-6030061 | MS.gene070323:CDS |
| TTGCCTGAGAAGGACATGCC+GGG | 0.581019 | 4.1:-6030413 | MS.gene070323:CDS |
| TCCTCAAGATGATCAATCTG+AGG | 0.581434 | 4.1:-6030273 | MS.gene070323:CDS |
| CCGCCACGTTCATCACTCTC+CGG | 0.581461 | 4.1:+6030209 | None:intergenic |
| ACTCGCGCCCGCGTAAGTAG+TGG | 0.583183 | 4.1:-6028301 | None:intergenic |
| ATCTTTGTCTGAATCTACTG+TGG | 0.586024 | 4.1:-6029592 | MS.gene070323:CDS |
| AGTTGCTAATGCTCTCCTGA+CGG | 0.586879 | 4.1:+6028358 | None:intergenic |
| TAATGAAAATGGATTAATGA+TGG | 0.587751 | 4.1:-6029127 | MS.gene070323:CDS |
| TCCCTTTGATATCCAAACCA+TGG | 0.589516 | 4.1:-6031218 | MS.gene070323:CDS |
| GAGTTACATTACGTGGCACA+AGG | 0.590124 | 4.1:-6029089 | MS.gene070323:CDS |
| GGTGGTTGTTGTTGAGGTGG+CGG | 0.590472 | 4.1:+6031430 | None:intergenic |
| TGAGTACTACGACTGACAGC+AGG | 0.594924 | 4.1:+6030065 | None:intergenic |
| AAGGAGATCCCTTAGAATTG+TGG | 0.596504 | 4.1:+6028390 | None:intergenic |
| TTGAATATCCACTACTTACG+CGG | 0.598952 | 4.1:+6028293 | None:intergenic |
| TTCTGCTCCCGAAGTTATGG+AGG | 0.599132 | 4.1:-6031281 | MS.gene070323:CDS |
| TTGCGCTTGCTGGCACCTGG+AGG | 0.601247 | 4.1:-6029519 | MS.gene070323:CDS |
| TTCAGCCACCACAATTCTAA+GGG | 0.601789 | 4.1:-6028398 | MS.gene070323:CDS |
| GCGGAAATGGCGGCACCTTG+AGG | 0.602253 | 4.1:-6029167 | MS.gene070323:CDS |
| GAAGATGCTCGTAACCGTCA+TGG | 0.602557 | 4.1:-6031382 | MS.gene070323:CDS |
| TGTTCGGTTTGCAAAAGAGG+TGG | 0.605338 | 4.1:+6031412 | None:intergenic |
| AAATGGCGGCACCTTGAGGA+AGG | 0.606950 | 4.1:-6029163 | MS.gene070323:CDS |
| CGACCTCGAGTTACATTACG+TGG | 0.607023 | 4.1:-6029096 | MS.gene070323:CDS |
| CGAGGACAAGTTGATGACAA+TGG | 0.608339 | 4.1:-6030101 | MS.gene070323:CDS |
| ATGTGCCTAATTTGGAAGAG+TGG | 0.608543 | 4.1:-6030379 | MS.gene070323:CDS |
| ACCTCAGATTGATCATCTTG+AGG | 0.608905 | 4.1:+6030272 | None:intergenic |
| AACAAGGAAGAAAGCCAACA+AGG | 0.609876 | 4.1:-6028582 | MS.gene070323:intron |
| TGGTTTGGATATCAAAGGGA+AGG | 0.619954 | 4.1:+6031221 | None:intergenic |
| TGTGCCTAATTTGGAAGAGT+GGG | 0.621322 | 4.1:-6030378 | MS.gene070323:CDS |
| TGTCCAAAATGCGGAAATGG+CGG | 0.624434 | 4.1:-6029177 | MS.gene070323:CDS |
| ACTGCATCCCTTCCACCTTG+AGG | 0.628249 | 4.1:+6028662 | None:intergenic |
| TTCAAACTCAAGTCCTGCAG+AGG | 0.629113 | 4.1:+6030302 | None:intergenic |
| GAAGGGAAGATGGTTGCTGA+TGG | 0.630809 | 4.1:-6030137 | MS.gene070323:CDS |
| AGAGGTGGTTGTTGTTGAGG+TGG | 0.631616 | 4.1:+6031427 | None:intergenic |
| TCACGGAACAAAACATCTCA+GGG | 0.633868 | 4.1:-6030474 | MS.gene070323:CDS |
| TGAATATCCACTACTTACGC+GGG | 0.635815 | 4.1:+6028294 | None:intergenic |
| GGACGACGACTTCTATATGG+TGG | 0.638637 | 4.1:-6028429 | MS.gene070323:CDS |
| GGGTACTTCATCCTAAAACA+AGG | 0.642784 | 4.1:-6028598 | MS.gene070323:CDS |
| TGCAAACAGTAAATGTGAAG+AGG | 0.648385 | 4.1:-6030436 | MS.gene070323:CDS |
| GAGATCCCTTAGAATTGTGG+TGG | 0.651673 | 4.1:+6028393 | None:intergenic |
| GCTAATGCTCTCCTGACGGG+AGG | 0.659205 | 4.1:+6028362 | None:intergenic |
| ACCCCTGAATCCATCAACAA+AGG | 0.662188 | 4.1:-6031190 | MS.gene070323:intron |
| AGTGACAGCTACCTTCCTCA+AGG | 0.664365 | 4.1:+6029152 | None:intergenic |
| GTAATGTAACTCGAGGTCGA+CGG | 0.674307 | 4.1:+6029100 | None:intergenic |
| TCATTGCCTTTACCTCAAGG+TGG | 0.675530 | 4.1:-6028674 | MS.gene070323:CDS |
| GTGCCACGTAATGTAACTCG+AGG | 0.676345 | 4.1:+6029093 | None:intergenic |
| ATACATGCAGAGAACAATGA+CGG | 0.679329 | 4.1:-6029855 | MS.gene070323:CDS |
| ATGAACGTGGCGGTTCAATG+AGG | 0.682906 | 4.1:-6030199 | MS.gene070323:CDS |
| GAGTAGCGTAGTGAAGAAGG+AGG | 0.690050 | 4.1:-6031455 | MS.gene070323:CDS |
| AGCATTGGAACAGGAAACCG+AGG | 0.692406 | 4.1:-6030354 | MS.gene070323:CDS |
| TCTGCTTCAGAGTTGCAGAG+AGG | 0.696099 | 4.1:+6029826 | None:intergenic |
| GATGGAATTGATGCATCTCG+AGG | 0.704288 | 4.1:-6030119 | MS.gene070323:CDS |
| AGTTACATTACGTGGCACAA+GGG | 0.712686 | 4.1:-6029088 | MS.gene070323:intron |
| ATTCCGGAGAGTGATGAACG+TGG | 0.742400 | 4.1:-6030212 | MS.gene070323:CDS |
| CCGGAGAGTGATGAACGTGG+CGG | 0.753397 | 4.1:-6030209 | MS.gene070323:CDS |
| CAGCAACAGAGATACCATGA+CGG | 0.755141 | 4.1:+6031368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGTTAAAAAACAAAAT+GGG | + | chr4.1:6028624-6028643 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAAAAACAAAA+TGG | + | chr4.1:6028625-6028644 | None:intergenic | 10.0% |
| !!! | ATATATATGAAAGTATATTT+TGG | - | chr4.1:6029150-6029169 | MS.gene070323:CDS | 10.0% |
| !! | AAAAAAGTGATAAACATTGA+AGG | - | chr4.1:6029630-6029649 | MS.gene070323:CDS | 20.0% |
| !! | AAAAAGTGATAAACATTGAA+GGG | - | chr4.1:6029631-6029650 | MS.gene070323:CDS | 20.0% |
| !! | AAAATTTACTTCAAATAGCA+AGG | + | chr4.1:6030364-6030383 | None:intergenic | 20.0% |
| !! | ATAATCATGTATCTTAAGAA+TGG | - | chr4.1:6030996-6031015 | MS.gene070323:intron | 20.0% |
| !!! | ATGTTTATCACTTTTTTCTT+AGG | + | chr4.1:6029627-6029646 | None:intergenic | 20.0% |
| !!! | TAAATTTTTGAATGTGTGAA+GGG | - | chr4.1:6030376-6030395 | MS.gene070323:CDS | 20.0% |
| !!! | TAATGAAAATGGATTAATGA+TGG | - | chr4.1:6030658-6030677 | MS.gene070323:intron | 20.0% |
| ! | AACATAAGCAGTTATATGAA+AGG | - | chr4.1:6029054-6029073 | MS.gene070323:intron | 25.0% |
| ! | ACACAAGACATTATATACTA+AGG | + | chr4.1:6029115-6029134 | None:intergenic | 25.0% |
| ! | ATAAAATGACTAGCATACTA+AGG | + | chr4.1:6030772-6030791 | None:intergenic | 25.0% |
| ! | CAGTTATATGAAAGGATAAT+CGG | - | chr4.1:6029062-6029081 | MS.gene070323:intron | 25.0% |
| ! | GATTATAATGTATTTCACAC+CGG | - | chr4.1:6030894-6030913 | MS.gene070323:intron | 25.0% |
| ! | TAAAATGACTAGCATACTAA+GGG | + | chr4.1:6030771-6030790 | None:intergenic | 25.0% |
| ! | TAATCAAGATCAACAAGATA+TGG | - | chr4.1:6029797-6029816 | MS.gene070323:CDS | 25.0% |
| ! | TACTTAATAACACACTTTGT+AGG | - | chr4.1:6031335-6031354 | MS.gene070323:CDS | 25.0% |
| ! | TCATAGAGATTAGAAGAAAT+AGG | + | chr4.1:6030462-6030481 | None:intergenic | 25.0% |
| ! | TGAGTATATTATGAGATACT+GGG | - | chr4.1:6030720-6030739 | MS.gene070323:intron | 25.0% |
| ! | TTAATTATTTGCATTCCAGA+TGG | - | chr4.1:6030531-6030550 | MS.gene070323:CDS | 25.0% |
| ! | TTGTTGAATACTAGATTCAT+GGG | - | chr4.1:6030832-6030851 | MS.gene070323:intron | 25.0% |
| !! | GTAAATTTTTGAATGTGTGA+AGG | - | chr4.1:6030375-6030394 | MS.gene070323:CDS | 25.0% |
| !! | TTTTCACAAATTCTCCTTTA+TGG | + | chr4.1:6028902-6028921 | None:intergenic | 25.0% |
| !!! | AGATGTTGATTTTCATTTGT+AGG | - | chr4.1:6030972-6030991 | MS.gene070323:intron | 25.0% |
| !!! | GTATATTTTGGATTCTAACT+TGG | - | chr4.1:6029162-6029181 | MS.gene070323:CDS | 25.0% |
| !!! | GTTGTTTTTATATGCCATAA+AGG | - | chr4.1:6028885-6028904 | MS.gene070323:intron | 25.0% |
| !!! | TATTGAAAATGTTGTTTCCA+AGG | - | chr4.1:6029899-6029918 | MS.gene070323:CDS | 25.0% |
| ATATCATCCCATCTTGTAAA+TGG | + | chr4.1:6031027-6031046 | None:intergenic | 30.0% | |
| ATCTTGTTGATCTTGATTAC+TGG | + | chr4.1:6029796-6029815 | None:intergenic | 30.0% | |
| ATTGTTACTAGTTAGTTGCA+CGG | - | chr4.1:6030316-6030335 | MS.gene070323:CDS | 30.0% | |
| CATTGCTCTAACTTATACTT+TGG | - | chr4.1:6029278-6029297 | MS.gene070323:intron | 30.0% | |
| CCTAAGTTATTTATCCAAAC+AGG | - | chr4.1:6029088-6029107 | MS.gene070323:intron | 30.0% | |
| CCTGTTTGGATAAATAACTT+AGG | + | chr4.1:6029091-6029110 | None:intergenic | 30.0% | |
| GGTTAAACCATTTACAAGAT+GGG | - | chr4.1:6031017-6031036 | MS.gene070323:intron | 30.0% | |
| GTGAGTATATTATGAGATAC+TGG | - | chr4.1:6030719-6030738 | MS.gene070323:intron | 30.0% | |
| GTTGTTGAATACTAGATTCA+TGG | - | chr4.1:6030831-6030850 | MS.gene070323:intron | 30.0% | |
| TGGTTAAACCATTTACAAGA+TGG | - | chr4.1:6031016-6031035 | MS.gene070323:intron | 30.0% | |
| TTATATACTAAGGTCCTGTT+TGG | + | chr4.1:6029105-6029124 | None:intergenic | 30.0% | |
| !! | AGCTATTCTAAAGAGTTTTC+AGG | + | chr4.1:6028733-6028752 | None:intergenic | 30.0% |
| !! | CTACTGATATAAGTTTTGTG+AGG | + | chr4.1:6028985-6029004 | None:intergenic | 30.0% |
| !!! | TGGAACTCTTTTTTACCATT+GGG | - | chr4.1:6029182-6029201 | MS.gene070323:CDS | 30.0% |
| !!! | TTGGAACTCTTTTTTACCAT+TGG | - | chr4.1:6029181-6029200 | MS.gene070323:CDS | 30.0% |
| AAACACACAAACAACCTTGT+TGG | + | chr4.1:6031220-6031239 | None:intergenic | 35.0% | |
| AAATGGGATACCTTTGTTGA+TGG | + | chr4.1:6028608-6028627 | None:intergenic | 35.0% | |
| AAATTTGCACTGCTATCTTC+AGG | + | chr4.1:6030044-6030063 | None:intergenic | 35.0% | |
| AATAAGCTGACAACGAGTTA+TGG | + | chr4.1:6028710-6028729 | None:intergenic | 35.0% | |
| AATAGCATATTGTGCTTCGT+AGG | + | chr4.1:6030491-6030510 | None:intergenic | 35.0% | |
| AGATGATAAGACTTCAAACC+TGG | - | chr4.1:6029848-6029867 | MS.gene070323:CDS | 35.0% | |
| ATACATGCAGAGAACAATGA+CGG | - | chr4.1:6029930-6029949 | MS.gene070323:CDS | 35.0% | |
| ATCAGATCTTATATCTCTCC+AGG | + | chr4.1:6030921-6030940 | None:intergenic | 35.0% | |
| ATCTTTGTCTGAATCTACTG+TGG | - | chr4.1:6030193-6030212 | MS.gene070323:CDS | 35.0% | |
| CAGAATGTTCTTCTCCAAAT+GGG | - | chr4.1:6030242-6030261 | MS.gene070323:CDS | 35.0% | |
| CATCTATCTAAGAGAACTTG+CGG | + | chr4.1:6030957-6030976 | None:intergenic | 35.0% | |
| GATAAACATTGAAGGGAAGA+TGG | - | chr4.1:6029638-6029657 | MS.gene070323:CDS | 35.0% | |
| GCTGTCACTGTTAATGAAAA+TGG | - | chr4.1:6030647-6030666 | MS.gene070323:intron | 35.0% | |
| TATGCTTCTCATCATCACTT+TGG | + | chr4.1:6029881-6029900 | None:intergenic | 35.0% | |
| TGAAGATAGCAGTGCAAATT+TGG | - | chr4.1:6030043-6030062 | MS.gene070323:CDS | 35.0% | |
| TGCAAACAGTAAATGTGAAG+AGG | - | chr4.1:6029349-6029368 | MS.gene070323:intron | 35.0% | |
| TGCATGTATCATATCATCCT+TGG | + | chr4.1:6029919-6029938 | None:intergenic | 35.0% | |
| TGCTCTAACTTATACTTTGG+AGG | - | chr4.1:6029281-6029300 | MS.gene070323:intron | 35.0% | |
| TTACTTCAAATAGCAAGGAC+AGG | + | chr4.1:6030359-6030378 | None:intergenic | 35.0% | |
| TTCACATTTACTGTTTGCAC+AGG | + | chr4.1:6029348-6029367 | None:intergenic | 35.0% | |
| TTCACTGTTACTGCTGAAAT+TGG | - | chr4.1:6030575-6030594 | MS.gene070323:intron | 35.0% | |
| ! | AGGATTTTCTGTCCAAAATG+CGG | - | chr4.1:6030599-6030618 | MS.gene070323:intron | 35.0% |
| ! | TCCATGGTTTGGATATCAAA+GGG | + | chr4.1:6028571-6028590 | None:intergenic | 35.0% |
| ! | TTCCATGGTTTGGATATCAA+AGG | + | chr4.1:6028572-6028591 | None:intergenic | 35.0% |
| ! | TTGATGACAATGGAGATGAT+TGG | - | chr4.1:6029694-6029713 | MS.gene070323:CDS | 35.0% |
| !! | ATACCTTTGTTGATGGATTC+AGG | + | chr4.1:6028601-6028620 | None:intergenic | 35.0% |
| !! | TAAGTTTTGTGAGGCTGTTT+TGG | + | chr4.1:6028976-6028995 | None:intergenic | 35.0% |
| !! | TACCTTTGTTGATGGATTCA+GGG | + | chr4.1:6028600-6028619 | None:intergenic | 35.0% |
| !! | TTCTAAAAGTGCTTATGAGC+TGG | + | chr4.1:6029033-6029052 | None:intergenic | 35.0% |
| !!! | TCTTTTTTACCATTGGGATG+TGG | - | chr4.1:6029188-6029207 | MS.gene070323:CDS | 35.0% |
| !!! | TTGGCTTTCTTCCTTGTTTT+AGG | + | chr4.1:6031201-6031220 | None:intergenic | 35.0% |
| AACAAGGAAGAAAGCCAACA+AGG | - | chr4.1:6031203-6031222 | MS.gene070323:CDS | 40.0% | |
| AACGACATTCCTACTTGTGT+AGG | - | chr4.1:6028654-6028673 | MS.gene070323:CDS | 40.0% | |
| AACGAGTTCTTTCAGTCACT+TGG | - | chr4.1:6030797-6030816 | MS.gene070323:intron | 40.0% | |
| AAGGAGATCCCTTAGAATTG+TGG | + | chr4.1:6031398-6031417 | None:intergenic | 40.0% | |
| AATAAAGAACACCACACTCG+TGG | + | chr4.1:6031271-6031290 | None:intergenic | 40.0% | |
| ACATTTACTGTTTGCACAGG+AGG | + | chr4.1:6029345-6029364 | None:intergenic | 40.0% | |
| ACCAGCTTCAATAACAGCAT+TGG | + | chr4.1:6028452-6028471 | None:intergenic | 40.0% | |
| ACCTCAGATTGATCATCTTG+AGG | + | chr4.1:6029516-6029535 | None:intergenic | 40.0% | |
| ACGAATCTCCTCCATAACTT+CGG | + | chr4.1:6028515-6028534 | None:intergenic | 40.0% | |
| AGCATCTTCCAAAACCTGTT+CGG | + | chr4.1:6028392-6028411 | None:intergenic | 40.0% | |
| AGTTACATTACGTGGCACAA+GGG | - | chr4.1:6030697-6030716 | MS.gene070323:intron | 40.0% | |
| ATAAAGAACACCACACTCGT+GGG | + | chr4.1:6031270-6031289 | None:intergenic | 40.0% | |
| ATCGGAATTTGCATTGTCCT+CGG | + | chr4.1:6029451-6029470 | None:intergenic | 40.0% | |
| ATCTTATATCTCTCCAGGAC+CGG | + | chr4.1:6030916-6030935 | None:intergenic | 40.0% | |
| ATGTGCCTAATTTGGAAGAG+TGG | - | chr4.1:6029406-6029425 | MS.gene070323:intron | 40.0% | |
| CAGAGGAAGGATTCTTGAAT+CGG | + | chr4.1:6029469-6029488 | None:intergenic | 40.0% | |
| CTGTTACTGCTGAAATTGGA+AGG | - | chr4.1:6030579-6030598 | MS.gene070323:intron | 40.0% | |
| GAAAGCTTATGACGAGAAAC+AGG | + | chr4.1:6028541-6028560 | None:intergenic | 40.0% | |
| GAGCATTAGCAACTTTCAGT+GGG | - | chr4.1:6031436-6031455 | MS.gene070323:CDS | 40.0% | |
| GCAGAATGTTCTTCTCCAAA+TGG | - | chr4.1:6030241-6030260 | MS.gene070323:CDS | 40.0% | |
| GGGTACTTCATCCTAAAACA+AGG | - | chr4.1:6031187-6031206 | MS.gene070323:intron | 40.0% | |
| GGGTTTGAATGTGCCTAATT+TGG | - | chr4.1:6029398-6029417 | MS.gene070323:intron | 40.0% | |
| GTAACAATTACCTGTGCAAC+TGG | + | chr4.1:6030304-6030323 | None:intergenic | 40.0% | |
| TAAGCTCTTCCTACACAAGT+AGG | + | chr4.1:6028666-6028685 | None:intergenic | 40.0% | |
| TCACGGAACAAAACATCTCA+GGG | - | chr4.1:6029311-6029330 | MS.gene070323:intron | 40.0% | |
| TCCCTTTGATATCCAAACCA+TGG | - | chr4.1:6028567-6028586 | MS.gene070323:intron | 40.0% | |
| TCCTCAAGATGATCAATCTG+AGG | - | chr4.1:6029512-6029531 | MS.gene070323:CDS | 40.0% | |
| TGAAACTCTTCCGGAAATTC+CGG | - | chr4.1:6029557-6029576 | MS.gene070323:CDS | 40.0% | |
| TGAAGATCAACTGCCTCAAA+GGG | - | chr4.1:6031167-6031186 | MS.gene070323:intron | 40.0% | |
| TGCAAAGTCACCAGTTATAC+AGG | + | chr4.1:6030219-6030238 | None:intergenic | 40.0% | |
| TGTGCCTAATTTGGAAGAGT+GGG | - | chr4.1:6029407-6029426 | MS.gene070323:intron | 40.0% | |
| TTCACGGAACAAAACATCTC+AGG | - | chr4.1:6029310-6029329 | MS.gene070323:intron | 40.0% | |
| TTCAGCCACCACAATTCTAA+GGG | - | chr4.1:6031387-6031406 | MS.gene070323:CDS | 40.0% | |
| TTCTCATTGCCTTTACCTCA+AGG | - | chr4.1:6031108-6031127 | MS.gene070323:intron | 40.0% | |
| TTCTGTCCAAAATGCGGAAA+TGG | - | chr4.1:6030605-6030624 | MS.gene070323:intron | 40.0% | |
| ! | AAAAGAGGTGGTTGTTGTTG+AGG | + | chr4.1:6028364-6028383 | None:intergenic | 40.0% |
| ! | AAAGTGCTTATGAGCTGGTT+TGG | + | chr4.1:6029028-6029047 | None:intergenic | 40.0% |
| ! | AGAGCATTAGCAACTTTCAG+TGG | - | chr4.1:6031435-6031454 | MS.gene070323:CDS | 40.0% |
| ! | CAAGATGATCAATCTGAGGT+TGG | - | chr4.1:6029516-6029535 | MS.gene070323:CDS | 40.0% |
| ! | TGATCAATCTGAGGTTGGTT+CGG | - | chr4.1:6029521-6029540 | MS.gene070323:CDS | 40.0% |
| ! | TGGTAGTTGTCAAGTTTGCT+AGG | - | chr4.1:6029211-6029230 | MS.gene070323:CDS | 40.0% |
| ! | TGGTTTGGATATCAAAGGGA+AGG | + | chr4.1:6028567-6028586 | None:intergenic | 40.0% |
| ! | TTAGGATGAAGTACCCTTTG+AGG | + | chr4.1:6031183-6031202 | None:intergenic | 40.0% |
| ! | TTTGAGGCAGTTGATCTTCA+CGG | + | chr4.1:6031167-6031186 | None:intergenic | 40.0% |
| ! | TTTGCAAACCGAACAGGTTT+TGG | - | chr4.1:6028381-6028400 | MS.gene070323:CDS | 40.0% |
| ! | TTTTTACCATTGGGATGTGG+TGG | - | chr4.1:6029191-6029210 | MS.gene070323:CDS | 40.0% |
| !! | ACCTTTGTTGATGGATTCAG+GGG | + | chr4.1:6028599-6028618 | None:intergenic | 40.0% |
| !! | GGTAGTTGTCAAGTTTGCTA+GGG | - | chr4.1:6029212-6029231 | MS.gene070323:CDS | 40.0% |
| AAGCATCCAACTTTGCTCAC+TGG | + | chr4.1:6030171-6030190 | None:intergenic | 45.0% | |
| AATGTATTTCACACCGGTCC+TGG | - | chr4.1:6030900-6030919 | MS.gene070323:intron | 45.0% | |
| ACCCCTGAATCCATCAACAA+AGG | - | chr4.1:6028595-6028614 | MS.gene070323:CDS | 45.0% | |
| AGTTGCTAATGCTCTCCTGA+CGG | + | chr4.1:6031430-6031449 | None:intergenic | 45.0% | |
| ATGATGCCAGTGAGCAAAGT+TGG | - | chr4.1:6030162-6030181 | MS.gene070323:CDS | 45.0% | |
| ATGGCACTTGAGTATCCATC+TGG | + | chr4.1:6030549-6030568 | None:intergenic | 45.0% | |
| CAGCAACAGAGATACCATGA+CGG | + | chr4.1:6028420-6028439 | None:intergenic | 45.0% | |
| CGAATCTCCTCCATAACTTC+GGG | + | chr4.1:6028514-6028533 | None:intergenic | 45.0% | |
| CGCGAGTAGTGATTGTCATT+TGG | + | chr4.1:6031471-6031490 | None:intergenic | 45.0% | |
| CTATCTTCAGGAGACAGACT+TGG | + | chr4.1:6030032-6030051 | None:intergenic | 45.0% | |
| CTTCAGCCACCACAATTCTA+AGG | - | chr4.1:6031386-6031405 | MS.gene070323:CDS | 45.0% | |
| GAAGCTGGTGAAAAGCTTCA+TGG | - | chr4.1:6028463-6028482 | MS.gene070323:intron | 45.0% | |
| GAGATCCCTTAGAATTGTGG+TGG | + | chr4.1:6031395-6031414 | None:intergenic | 45.0% | |
| GAGTTACATTACGTGGCACA+AGG | - | chr4.1:6030696-6030715 | MS.gene070323:intron | 45.0% | |
| GATGGAATTGATGCATCTCG+AGG | - | chr4.1:6029666-6029685 | MS.gene070323:CDS | 45.0% | |
| GCATACTGCTGAAACTCTTC+CGG | - | chr4.1:6029548-6029567 | MS.gene070323:CDS | 45.0% | |
| GCCAATGCTGTTATTGAAGC+TGG | - | chr4.1:6028448-6028467 | MS.gene070323:intron | 45.0% | |
| GCTTCCCACTCTTCCAAATT+AGG | + | chr4.1:6029414-6029433 | None:intergenic | 45.0% | |
| GTAATGTAACTCGAGGTCGA+CGG | + | chr4.1:6030688-6030707 | None:intergenic | 45.0% | |
| GTAGGACGACGACTTCTATA+TGG | - | chr4.1:6031353-6031372 | MS.gene070323:CDS | 45.0% | |
| GTGAAGATCAACTGCCTCAA+AGG | - | chr4.1:6031166-6031185 | MS.gene070323:intron | 45.0% | |
| TAATGTAACTCGAGGTCGAC+GGG | + | chr4.1:6030687-6030706 | None:intergenic | 45.0% | |
| TCATCACTCTCCGGAATTTC+CGG | + | chr4.1:6029570-6029589 | None:intergenic | 45.0% | |
| TCATTGCCTTTACCTCAAGG+TGG | - | chr4.1:6031111-6031130 | MS.gene070323:intron | 45.0% | |
| TCTACTGTGGCCTGTATAAC+TGG | - | chr4.1:6030206-6030225 | MS.gene070323:CDS | 45.0% | |
| TGTCCAAAATGCGGAAATGG+CGG | - | chr4.1:6030608-6030627 | MS.gene070323:intron | 45.0% | |
| TTACTGTTTGCACAGGAGGT+GGG | + | chr4.1:6029341-6029360 | None:intergenic | 45.0% | |
| TTCAAACTCAAGTCCTGCAG+AGG | + | chr4.1:6029486-6029505 | None:intergenic | 45.0% | |
| TTCAAGAATCCTTCCTCTGC+AGG | - | chr4.1:6029470-6029489 | MS.gene070323:intron | 45.0% | |
| TTCAGCAGTAACAGTGAAGC+AGG | + | chr4.1:6030573-6030592 | None:intergenic | 45.0% | |
| TTTACTGTTTGCACAGGAGG+TGG | + | chr4.1:6029342-6029361 | None:intergenic | 45.0% | |
| ! | AAGCAGATGACTCTGGAAGA+AGG | - | chr4.1:6029975-6029994 | MS.gene070323:CDS | 45.0% |
| ! | ACCTCTTTTGCAAACCGAAC+AGG | - | chr4.1:6028375-6028394 | MS.gene070323:CDS | 45.0% |
| ! | ACCTGTTCGGTTTGCAAAAG+AGG | + | chr4.1:6028379-6028398 | None:intergenic | 45.0% |
| ! | ACTTTGGAGGCTCAGATTCA+CGG | - | chr4.1:6029294-6029313 | MS.gene070323:intron | 45.0% |
| ! | TGTTCGGTTTGCAAAAGAGG+TGG | + | chr4.1:6028376-6028395 | None:intergenic | 45.0% |
| ! | TGTTTCTGCTCCCGAAGTTA+TGG | - | chr4.1:6028501-6028520 | MS.gene070323:intron | 45.0% |
| ! | TTTGGAAGAGTGGGAAGCAT+TGG | - | chr4.1:6029416-6029435 | MS.gene070323:intron | 45.0% |
| !! | AACTCTGAAGCAGATGACTC+TGG | - | chr4.1:6029968-6029987 | MS.gene070323:CDS | 45.0% |
| !! | AAGAACCAAAAGCATCGTGC+TGG | - | chr4.1:6028308-6028327 | MS.gene070323:CDS | 45.0% |
| !! | CGAGGACAAGTTGATGACAA+TGG | - | chr4.1:6029684-6029703 | MS.gene070323:CDS | 45.0% |
| !! | GCTTATGAGCTGGTTTGGAT+TGG | + | chr4.1:6029023-6029042 | None:intergenic | 45.0% |
| !! | GTCAAGTTTGCTAGGGTTAC+TGG | - | chr4.1:6029219-6029238 | MS.gene070323:CDS | 45.0% |
| !! | TTGTTGATGGATTCAGGGGT+TGG | + | chr4.1:6028595-6028614 | None:intergenic | 45.0% |
| !! | TAATTAATAAATAATAGATT+TGG | - | chr4.1:6030865-6030884 | MS.gene070323:intron | 5.0% |
| !! | TTTATTTATTAATTAATGTT+TGG | - | chr4.1:6028774-6028793 | MS.gene070323:intron | 5.0% |
| AACTCAAGTCCTGCAGAGGA+AGG | + | chr4.1:6029482-6029501 | None:intergenic | 50.0% | |
| AGTGACAGCTACCTTCCTCA+AGG | + | chr4.1:6030636-6030655 | None:intergenic | 50.0% | |
| ATGAACGTGGCGGTTCAATG+AGG | - | chr4.1:6029586-6029605 | MS.gene070323:CDS | 50.0% | |
| ATGTTCGTTTCCCACGAGTG+TGG | - | chr4.1:6031257-6031276 | MS.gene070323:CDS | 50.0% | |
| ATTCCGGAGAGTGATGAACG+TGG | - | chr4.1:6029573-6029592 | MS.gene070323:CDS | 50.0% | |
| CAACTACCACCACATCCCAA+TGG | + | chr4.1:6029200-6029219 | None:intergenic | 50.0% | |
| CACAGATACACCAGTTGCAC+AGG | - | chr4.1:6030291-6030310 | MS.gene070323:CDS | 50.0% | |
| CAGTAACAGTGAAGCAGGCA+TGG | + | chr4.1:6030568-6030587 | None:intergenic | 50.0% | |
| CATCAGCAGCTTCACTTGAC+TGG | + | chr4.1:6030130-6030149 | None:intergenic | 50.0% | |
| CGACCTCGAGTTACATTACG+TGG | - | chr4.1:6030689-6030708 | MS.gene070323:intron | 50.0% | |
| CTGCTTCAGAGTTGCAGAGA+GGG | + | chr4.1:6029961-6029980 | None:intergenic | 50.0% | |
| CTGGAGTAGCGTAGTGAAGA+AGG | - | chr4.1:6028327-6028346 | MS.gene070323:CDS | 50.0% | |
| CTGTCAGTCGTAGTACTCAC+AGG | - | chr4.1:6029724-6029743 | MS.gene070323:CDS | 50.0% | |
| GAAGATGCTCGTAACCGTCA+TGG | - | chr4.1:6028403-6028422 | MS.gene070323:CDS | 50.0% | |
| GAAGGGAAGATGGTTGCTGA+TGG | - | chr4.1:6029648-6029667 | MS.gene070323:CDS | 50.0% | |
| GAGTAGCGTAGTGAAGAAGG+AGG | - | chr4.1:6028330-6028349 | MS.gene070323:CDS | 50.0% | |
| GCCTTTACCTCAAGGTGGAA+GGG | - | chr4.1:6031116-6031135 | MS.gene070323:intron | 50.0% | |
| GGACGACGACTTCTATATGG+TGG | - | chr4.1:6031356-6031375 | MS.gene070323:CDS | 50.0% | |
| GTGCCACGTAATGTAACTCG+AGG | + | chr4.1:6030695-6030714 | None:intergenic | 50.0% | |
| GTTGCTAATGCTCTCCTGAC+GGG | + | chr4.1:6031429-6031448 | None:intergenic | 50.0% | |
| TCCCTTCCACCTTGAGGTAA+AGG | + | chr4.1:6031120-6031139 | None:intergenic | 50.0% | |
| TCTGCTTCAGAGTTGCAGAG+AGG | + | chr4.1:6029962-6029981 | None:intergenic | 50.0% | |
| TGAGTACTACGACTGACAGC+AGG | + | chr4.1:6029723-6029742 | None:intergenic | 50.0% | |
| TGCCTTTACCTCAAGGTGGA+AGG | - | chr4.1:6031115-6031134 | MS.gene070323:intron | 50.0% | |
| TGGTGTATCTGTGATCCTCC+AGG | + | chr4.1:6030284-6030303 | None:intergenic | 50.0% | |
| TGTGAAGAGGTTGCCTGAGA+AGG | - | chr4.1:6029362-6029381 | MS.gene070323:intron | 50.0% | |
| TTCTGCTCCCGAAGTTATGG+AGG | - | chr4.1:6028504-6028523 | MS.gene070323:intron | 50.0% | |
| ! | AGAGGTGGTTGTTGTTGAGG+TGG | + | chr4.1:6028361-6028380 | None:intergenic | 50.0% |
| ! | AGCATTGGAACAGGAAACCG+AGG | - | chr4.1:6029431-6029450 | MS.gene070323:intron | 50.0% |
| ! | CATCACTTTGGTGCACATCC+AGG | + | chr4.1:6029869-6029888 | None:intergenic | 50.0% |
| ! | CTACTCCAGCACGATGCTTT+TGG | + | chr4.1:6028316-6028335 | None:intergenic | 50.0% |
| !! | AGAGTGGGAAGCATTGGAAC+AGG | - | chr4.1:6029422-6029441 | MS.gene070323:intron | 50.0% |
| AAATGGCGGCACCTTGAGGA+AGG | - | chr4.1:6030622-6030641 | MS.gene070323:intron | 55.0% | |
| ACTGCATCCCTTCCACCTTG+AGG | + | chr4.1:6031126-6031145 | None:intergenic | 55.0% | |
| CCAGCAAGCGCAAACCCATT+TGG | + | chr4.1:6030259-6030278 | None:intergenic | 55.0% | |
| GGCACATTCAAACCCCATCC+CGG | + | chr4.1:6029393-6029412 | None:intergenic | 55.0% | |
| GTTGCCTGAGAAGGACATGC+CGG | - | chr4.1:6029371-6029390 | MS.gene070323:intron | 55.0% | |
| TGAGAAGGACATGCCGGGAT+GGG | - | chr4.1:6029377-6029396 | MS.gene070323:intron | 55.0% | |
| TTGCCTGAGAAGGACATGCC+GGG | - | chr4.1:6029372-6029391 | MS.gene070323:intron | 55.0% | |
| ! | CCAAATGGGTTTGCGCTTGC+TGG | - | chr4.1:6030256-6030275 | MS.gene070323:CDS | 55.0% |
| ! | GGTGGTTGTTGTTGAGGTGG+CGG | + | chr4.1:6028358-6028377 | None:intergenic | 55.0% |
| ! | GTGCCGCCATTTCCGCATTT+TGG | + | chr4.1:6030614-6030633 | None:intergenic | 55.0% |
| !! | CAGGGGTTGGTTCCATGGTT+TGG | + | chr4.1:6028582-6028601 | None:intergenic | 55.0% |
| !! | GGATTCAGGGGTTGGTTCCA+TGG | + | chr4.1:6028587-6028606 | None:intergenic | 55.0% |
| CATCCCGGCATGTCCTTCTC+AGG | + | chr4.1:6029378-6029397 | None:intergenic | 60.0% | |
| CCGCCACGTTCATCACTCTC+CGG | + | chr4.1:6029579-6029598 | None:intergenic | 60.0% | |
| CCGGAGAGTGATGAACGTGG+CGG | - | chr4.1:6029576-6029595 | MS.gene070323:CDS | 60.0% | |
| CTGAGAAGGACATGCCGGGA+TGG | - | chr4.1:6029376-6029395 | MS.gene070323:intron | 60.0% | |
| GAGAAGGACATGCCGGGATG+GGG | - | chr4.1:6029378-6029397 | MS.gene070323:intron | 60.0% | |
| GCTAATGCTCTCCTGACGGG+AGG | + | chr4.1:6031426-6031445 | None:intergenic | 60.0% | |
| ATGCTCTCCTGACGGGAGGC+TGG | + | chr4.1:6031422-6031441 | None:intergenic | 65.0% | |
| CTCCTGACGGGAGGCTGGAA+AGG | + | chr4.1:6031417-6031436 | None:intergenic | 65.0% | |
| CTCCTTTCCAGCCTCCCGTC+AGG | - | chr4.1:6031412-6031431 | MS.gene070323:CDS | 65.0% | |
| GCGGAAATGGCGGCACCTTG+AGG | - | chr4.1:6030618-6030637 | MS.gene070323:intron | 65.0% | |
| ! | GGTTTGCGCTTGCTGGCACC+TGG | - | chr4.1:6030263-6030282 | MS.gene070323:CDS | 65.0% |
| ! | TTGCGCTTGCTGGCACCTGG+AGG | - | chr4.1:6030266-6030285 | MS.gene070323:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 6028304 | 6031503 | 6028304 | ID=MS.gene070323 |
| chr4.1 | mRNA | 6028304 | 6031503 | 6028304 | ID=MS.gene070323.t1;Parent=MS.gene070323 |
| chr4.1 | exon | 6031191 | 6031503 | 6031191 | ID=MS.gene070323.t1.exon1;Parent=MS.gene070323.t1 |
| chr4.1 | CDS | 6031191 | 6031503 | 6031191 | ID=cds.MS.gene070323.t1;Parent=MS.gene070323.t1 |
| chr4.1 | exon | 6029495 | 6030590 | 6029495 | ID=MS.gene070323.t1.exon2;Parent=MS.gene070323.t1 |
| chr4.1 | CDS | 6029495 | 6030590 | 6029495 | ID=cds.MS.gene070323.t1;Parent=MS.gene070323.t1 |
| chr4.1 | exon | 6029089 | 6029257 | 6029089 | ID=MS.gene070323.t1.exon3;Parent=MS.gene070323.t1 |
| chr4.1 | CDS | 6029089 | 6029257 | 6029089 | ID=cds.MS.gene070323.t1;Parent=MS.gene070323.t1 |
| chr4.1 | exon | 6028583 | 6028699 | 6028583 | ID=MS.gene070323.t1.exon4;Parent=MS.gene070323.t1 |
| chr4.1 | CDS | 6028583 | 6028699 | 6028583 | ID=cds.MS.gene070323.t1;Parent=MS.gene070323.t1 |
| chr4.1 | exon | 6028304 | 6028450 | 6028304 | ID=MS.gene070323.t1.exon5;Parent=MS.gene070323.t1 |
| chr4.1 | CDS | 6028304 | 6028450 | 6028304 | ID=cds.MS.gene070323.t1;Parent=MS.gene070323.t1 |
| Gene Sequence |
| Protein sequence |
