AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030840.t1 MTR_8g089980 96.699 818 26 1 1 817 1 818 0.0 1645
MS.gene030840.t1 MTR_3g086950 66.709 784 221 9 1 767 1 761 0.0 1056
MS.gene030840.t1 MTR_3g460700 30.876 217 118 6 166 378 296 484 4.78e-18 89.4
MS.gene030840.t1 MTR_5g096020 33.728 169 86 7 185 351 340 484 1.35e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030840.t1 AT2G22400 60.396 808 276 14 8 788 11 801 0.0 972
MS.gene030840.t1 AT4G40000 57.269 791 292 11 1 773 1 763 0.0 875
MS.gene030840.t1 AT4G40000 55.382 576 214 10 216 773 1 551 0.0 608
MS.gene030840.t1 AT4G26600 29.730 296 157 12 166 445 327 587 4.11e-17 86.3
MS.gene030840.t1 AT4G26600 29.730 296 157 12 166 445 327 587 4.89e-17 86.3
MS.gene030840.t1 AT5G55920 30.244 205 111 6 161 359 339 517 2.75e-16 84.0
MS.gene030840.t1 AT4G26600 31.313 198 108 4 166 359 327 500 3.55e-16 82.8
MS.gene030840.t1 AT4G26600 29.954 217 120 5 166 378 327 515 3.73e-16 83.2
MS.gene030840.t1 AT3G13180 31.361 169 90 4 185 351 334 478 5.33e-13 72.8

Find 183 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAGGATGCCGTTTAAA+AGG 0.190650 4.2:-11556248 MS.gene030840:CDS
TAAAAGAAAGCTACAATATC+AGG 0.193012 4.2:-11553246 MS.gene030840:CDS
TTTACTTTCTGCAGGAATTC+AGG 0.226926 4.2:-11556039 MS.gene030840:intron
TTCCGTTCTTGCAGCTATTC+TGG 0.233522 4.2:-11553489 MS.gene030840:intron
GCTCTTCACCATGTGCTTTC+CGG 0.245863 4.2:-11552261 MS.gene030840:CDS
CTTCATGATTAGTAACAATT+AGG 0.246866 4.2:+11556279 None:intergenic
TGGTTGTTGCGTGGTTATTA+TGG 0.247821 4.2:-11552080 MS.gene030840:CDS
TTAAAGCTAGAAAATGAAAT+TGG 0.254499 4.2:-11557163 MS.gene030840:CDS
GGCACAGAAAATGGCTCTTC+TGG 0.261873 4.2:-11551825 MS.gene030840:CDS
CTTTCCAGTATGTTTCCTTC+TGG 0.278031 4.2:-11553892 MS.gene030840:CDS
TCCTTCTGGCAAATGCTATC+AGG 0.284071 4.2:-11553878 MS.gene030840:CDS
CATCATTTAGAATCAATTCT+AGG 0.285604 4.2:-11558648 MS.gene030840:intron
GATGAGCGCTTTCCATTTGA+TGG 0.299140 4.2:-11553143 MS.gene030840:CDS
GGTTTATCTTTACTCAAAAT+CGG 0.300019 4.2:-11555080 MS.gene030840:CDS
AAAGTCTTGCAAGCAATTCT+TGG 0.304314 4.2:+11551859 None:intergenic
ACGGAACTTGGGAACATCTT+TGG 0.305209 4.2:+11553927 None:intergenic
TTCCGTTCTTCACGTGTTAG+AGG 0.306424 4.2:+11553326 None:intergenic
ATAGGTTCCTCCCCTATTCT+TGG 0.312286 4.2:-11556749 MS.gene030840:intron
TGGTTATGTATGGAAGAATA+AGG 0.325256 4.2:+11552218 None:intergenic
TGTATCCCATACAGATGATT+TGG 0.333655 4.2:-11553357 MS.gene030840:CDS
ATACGTCTAGGCACAGAAAA+TGG 0.356138 4.2:-11551834 MS.gene030840:CDS
TACCATTTCCGCCACATATC+AGG 0.360042 4.2:+11556122 None:intergenic
GGTTGTTGCGTGGTTATTAT+GGG 0.360528 4.2:-11552079 MS.gene030840:CDS
GTCAAAACAGAGAAAACGTT+TGG 0.362743 4.2:-11558849 MS.gene030840:CDS
CGGCCTTTGCCCTGGTATCC+CGG 0.363804 4.2:-11558349 MS.gene030840:CDS
GTTTATCTTTACTCAAAATC+GGG 0.381887 4.2:-11555079 MS.gene030840:CDS
CTGAATGCACATCCAAGAAT+AGG 0.383509 4.2:+11556737 None:intergenic
AATCACACTTCTACGGAACT+TGG 0.388539 4.2:+11553915 None:intergenic
TATCTTCCAAATCATCTGTA+TGG 0.390960 4.2:+11553351 None:intergenic
TGAATGCACATCCAAGAATA+GGG 0.393782 4.2:+11556738 None:intergenic
GCTTACTGTCAAGTACAAAA+TGG 0.398024 4.2:+11556713 None:intergenic
AACACAGCAGAGAAGGTTCC+AGG 0.405306 4.2:-11553269 MS.gene030840:CDS
AGCAAAGTTCCCGGGATACC+AGG 0.408224 4.2:+11558339 None:intergenic
AGCTACAATATCAGGGCAAA+TGG 0.412664 4.2:-11553238 MS.gene030840:CDS
TTACTTTCTGCAGGAATTCA+GGG 0.413804 4.2:-11556038 MS.gene030840:intron
GTCGGCCAGGTCTCAAGAAA+TGG 0.414879 4.2:-11554629 MS.gene030840:CDS
CACCTGATATGTGGCGGAAA+TGG 0.415761 4.2:-11556124 MS.gene030840:intron
AAGACAGGAAGCTGTTAGTA+TGG 0.418992 4.2:-11557131 MS.gene030840:intron
TATTGTTGCGTTGAACTTCT+CGG 0.421626 4.2:-11553048 MS.gene030840:CDS
CAATCGGATGCTGGAGGGGT+AGG 0.425361 4.2:-11551917 MS.gene030840:CDS
TTCACCTCCAACATAGTTAG+AGG 0.427601 4.2:+11551788 None:intergenic
ATAATTTGCTTGGTTATGTA+TGG 0.434010 4.2:+11552208 None:intergenic
GCATAGCAATTAAAACTTGT+AGG 0.441578 4.2:+11555995 None:intergenic
GGTTATGTATGGAAGAATAA+GGG 0.441749 4.2:+11552219 None:intergenic
TGAATGCCAAGCAAAGTTCC+CGG 0.442297 4.2:+11558330 None:intergenic
ATTCTCAAACTACTACTCAT+TGG 0.443034 4.2:-11558783 MS.gene030840:CDS
GGTGTATAGTCTCGAGCAAT+TGG 0.445281 4.2:+11556553 None:intergenic
TTGTTGACTCGTCAACTTTG+AGG 0.446066 4.2:+11551943 None:intergenic
TCGGAGGATAAGGAAGGGTC+TGG 0.446587 4.2:+11558808 None:intergenic
AATTGTTGATCCACAAGAAT+GGG 0.449501 4.2:-11558707 MS.gene030840:CDS
GGCAAATGCTATCAGGATCT+TGG 0.450132 4.2:-11553871 MS.gene030840:CDS
GGTATCCCGGGAACTTTGCT+TGG 0.450478 4.2:-11558336 MS.gene030840:CDS
AGCACTAGAGAATCCTTTGA+TGG 0.450855 4.2:-11553773 MS.gene030840:CDS
TGTTGACTCGTCAACTTTGA+GGG 0.452988 4.2:+11551944 None:intergenic
AAAAGGGAATTATGAAAGAA+TGG 0.453153 4.2:-11556231 MS.gene030840:CDS
TGATGATATTCGTTCCCAAT+TGG 0.458564 4.2:-11558524 MS.gene030840:CDS
GATAAGGAAGGGTCTGGATC+TGG 0.459026 4.2:+11558814 None:intergenic
GCACAGAAAATGGCTCTTCT+GGG 0.461885 4.2:-11551824 MS.gene030840:CDS
TCCTCAAGACTCTGTTTGCT+AGG 0.463373 4.2:+11553461 None:intergenic
GGACTTCAAGCGTCTTCTGC+AGG 0.467959 4.2:-11552170 MS.gene030840:CDS
TGCGTGGTTATTATGGGTAA+AGG 0.468510 4.2:-11552073 MS.gene030840:intron
GCAATCCTTCGGATGATATC+CGG 0.470647 4.2:+11552242 None:intergenic
GATGCTGGAGGGGTAGGGCG+AGG 0.471870 4.2:-11551911 MS.gene030840:CDS
TTCCTTTGATTCTTATTACA+AGG 0.477035 4.2:-11558737 MS.gene030840:CDS
AGGTGAAGCACAGGCTGTAC+AGG 0.479774 4.2:-11551772 MS.gene030840:CDS
GGCCTTTGCCCTGGTATCCC+GGG 0.479981 4.2:-11558348 MS.gene030840:CDS
TCCCAGGATGCCGTTTAAAA+GGG 0.480126 4.2:-11556247 MS.gene030840:CDS
ATGATTAGTAACAATTAGGT+TGG 0.480820 4.2:+11556283 None:intergenic
GAGGTGAGACAGAGGCGATT+CGG 0.481360 4.2:-11558369 MS.gene030840:CDS
CATAACCAAGCAAATTATAC+AGG 0.483742 4.2:-11552203 MS.gene030840:CDS
TAGGGCGAGGTTGTCCGTGA+TGG 0.485207 4.2:-11551898 MS.gene030840:CDS
TAATTGTTGATCCACAAGAA+TGG 0.487617 4.2:-11558708 MS.gene030840:CDS
AGATGCCTGTATAATTTGCT+TGG 0.489845 4.2:+11552198 None:intergenic
TTTGCCAGAAGGAAACATAC+TGG 0.491351 4.2:+11553888 None:intergenic
AATCGGATGCTGGAGGGGTA+GGG 0.491437 4.2:-11551916 MS.gene030840:CDS
CAGAAGACGCTTGAAGTCCT+CGG 0.494208 4.2:+11552174 None:intergenic
ACCTTCCATTTCTTGAGACC+TGG 0.495511 4.2:+11554624 None:intergenic
ATGATGCAGGCAATGGTGTT+CGG 0.497996 4.2:+11558665 None:intergenic
AAGAATAAGGGGCAATCCTT+CGG 0.498704 4.2:+11552231 None:intergenic
TTGCAGCACAGCAATGAAGA+AGG 0.499587 4.2:+11553672 None:intergenic
CAACAATAGCAATCGGATGC+TGG 0.499828 4.2:-11551926 MS.gene030840:CDS
GACAATTCCTCTAACTATGT+TGG 0.501847 4.2:-11551795 MS.gene030840:CDS
GTAACAAGGTGACCATCAAA+TGG 0.503653 4.2:+11553131 None:intergenic
AGAAAATGGCTCTTCTGGGC+AGG 0.504580 4.2:-11551820 MS.gene030840:CDS
AAGGCAGCAAACTTATTGCC+TGG 0.507560 4.2:-11552100 MS.gene030840:CDS
AGGAATTCAGGGATGGGACA+AGG 0.507941 4.2:-11556027 MS.gene030840:CDS
AACAATATCCTTGACTGACT+TGG 0.510238 4.2:+11553064 None:intergenic
AGGCGATTCGGCCTTTGCCC+TGG 0.513851 4.2:-11558357 MS.gene030840:CDS
GTCCGTGATGGTCTCTGCAA+TGG 0.514638 4.2:-11551886 MS.gene030840:CDS
AGGATCACTGCCTGATGGAA+TGG 0.519136 4.2:-11556517 MS.gene030840:intron
GACGAGTCAACAATAGCAAT+CGG 0.521462 4.2:-11551933 MS.gene030840:CDS
AGAAGACGCTTGAAGTCCTC+GGG 0.525989 4.2:+11552175 None:intergenic
ATGACACAAACCATTCCATC+AGG 0.526171 4.2:+11556507 None:intergenic
ACCAGAGCAACCATGGGTAG+AGG 0.533404 4.2:-11558901 None:intergenic
GGTTATTTGTAGGTTGCTGA+AGG 0.535471 4.2:-11558391 MS.gene030840:intron
GTTGCGTTGAACTTCTCGGT+TGG 0.536011 4.2:-11553044 MS.gene030840:CDS
TGATGCCGAGTTTGGTGAAA+AGG 0.538887 4.2:-11552119 MS.gene030840:CDS
CAACTGAAAATGACCTCGGT+TGG 0.539529 4.2:-11553017 MS.gene030840:CDS
TTCCTTGTAATAAGAATCAA+AGG 0.539742 4.2:+11558735 None:intergenic
CGTGCATTCACTTCGCGCTG+AGG 0.542110 4.2:-11558491 MS.gene030840:intron
CCACAACTTATTCGTCGGCC+AGG 0.547313 4.2:-11554642 MS.gene030840:CDS
ATCTTCCAAATCATCTGTAT+GGG 0.548339 4.2:+11553352 None:intergenic
TTGTAATAAGAATCAAAGGA+AGG 0.549320 4.2:+11558739 None:intergenic
TGGAAAGAATCACACTTCTA+CGG 0.550513 4.2:+11553908 None:intergenic
AGTAACAATTAGGTTGGCTG+TGG 0.551773 4.2:+11556289 None:intergenic
ATCACACTTCTACGGAACTT+GGG 0.552405 4.2:+11553916 None:intergenic
TCCTGATAGCATTTGCCAGA+AGG 0.552899 4.2:+11553877 None:intergenic
TCGTGACCTTCCTCTACCCA+TGG 0.553571 4.2:+11558891 None:intergenic
TTTATCTTTACTCAAAATCG+GGG 0.553832 4.2:-11555078 MS.gene030840:CDS
TGTAATAAGAATCAAAGGAA+GGG 0.556130 4.2:+11558740 None:intergenic
AAATGGCTCTTCTGGGCAGG+TGG 0.556454 4.2:-11551817 MS.gene030840:CDS
ATACACCAATCCACAAAAGC+AGG 0.557146 4.2:-11556537 MS.gene030840:CDS
TCAGCAGACTCCTCCATCAA+AGG 0.560066 4.2:+11553760 None:intergenic
TGCACAAAACACAGCAGAGA+AGG 0.560171 4.2:-11553276 MS.gene030840:CDS
AGCTTCCACAACTTATTCGT+CGG 0.560441 4.2:-11554647 MS.gene030840:CDS
CTGTGCGATGTCCCGTGTAG+TGG 0.563031 4.2:-11556167 MS.gene030840:CDS
AATTGGAAATATCACAAGAC+AGG 0.565338 4.2:-11557146 MS.gene030840:CDS
CTATGTTGGAGGTGAAGCAC+AGG 0.566402 4.2:-11551781 MS.gene030840:CDS
ATCCTCATGCAATGCTCTAG+AGG 0.566410 4.2:+11553721 None:intergenic
GAATGCCAAGCAAAGTTCCC+GGG 0.567018 4.2:+11558331 None:intergenic
TTCTGCAGGAATTCAGGGAT+GGG 0.568230 4.2:-11556033 MS.gene030840:intron
TTCCCGGGATACCAGGGCAA+AGG 0.568734 4.2:+11558346 None:intergenic
CATGAAGCACAACATTTCCC+AGG 0.569181 4.2:-11556263 MS.gene030840:CDS
TTTCTGCAGGAATTCAGGGA+TGG 0.570795 4.2:-11556034 MS.gene030840:intron
ATGAATTGATCCCATTCTTG+TGG 0.571295 4.2:+11558697 None:intergenic
GTTATGTATGGAAGAATAAG+GGG 0.573543 4.2:+11552220 None:intergenic
GAATTGATTCTAAATGATGC+AGG 0.577108 4.2:+11558652 None:intergenic
AAGGTCACGAACTCAAAGAA+AGG 0.577671 4.2:-11558878 MS.gene030840:CDS
TTCGTAAGGCACCTGATATG+TGG 0.580986 4.2:-11556133 MS.gene030840:CDS
AAAAGAAAGCTACAATATCA+GGG 0.582226 4.2:-11553245 MS.gene030840:CDS
ATAGCAATCGGATGCTGGAG+GGG 0.584256 4.2:-11551921 MS.gene030840:CDS
TGCTGAAGGAGGTGAGACAG+AGG 0.584654 4.2:-11558377 MS.gene030840:CDS
TATCAATGTTTCGTGTAACA+AGG 0.585607 4.2:+11553117 None:intergenic
AATAGCAATCGGATGCTGGA+GGG 0.585812 4.2:-11551922 MS.gene030840:CDS
GGAATTCAGGGATGGGACAA+GGG 0.587424 4.2:-11556026 MS.gene030840:CDS
AATTCCTCTAACTATGTTGG+AGG 0.587774 4.2:-11551792 MS.gene030840:CDS
GTCCTCTAACACGTGAAGAA+CGG 0.593200 4.2:-11553328 MS.gene030840:CDS
TGGAGATGGTACACTTCGTA+AGG 0.594241 4.2:-11556147 MS.gene030840:CDS
TATTTGTAGGTTGCTGAAGG+AGG 0.594800 4.2:-11558388 MS.gene030840:intron
GAACACGATCAAATAACAGT+TGG 0.595675 4.2:+11556189 None:intergenic
GCAAAGTTCCCGGGATACCA+GGG 0.600427 4.2:+11558340 None:intergenic
CTATGTCTCCAAGTCAGTCA+AGG 0.602696 4.2:-11553072 MS.gene030840:CDS
GAAAGACAAACAGCACGAGA+AGG 0.602807 4.2:-11552286 MS.gene030840:CDS
CTTATTGCCTGGTTGTTGCG+TGG 0.607662 4.2:-11552089 MS.gene030840:CDS
AAAGCAGGATCACTGCCTGA+TGG 0.612819 4.2:-11556522 MS.gene030840:CDS
CAATAGCAATCGGATGCTGG+AGG 0.613159 4.2:-11551923 MS.gene030840:CDS
CCTGGCCGACGAATAAGTTG+TGG 0.613657 4.2:+11554642 None:intergenic
AGACAAACAGCACGAGAAGG+TGG 0.614134 4.2:-11552283 MS.gene030840:CDS
GCTCCAGTGTTCTGATCATG+AGG 0.618002 4.2:+11553694 None:intergenic
GCTTAGGAAGAATCAAACAT+TGG 0.618665 4.2:-11558290 MS.gene030840:CDS
TCCTATTGAAAATGAAGCTG+TGG 0.620217 4.2:-11555024 MS.gene030840:CDS
ATGCCTCATGATCAGAACAC+TGG 0.621782 4.2:-11553697 MS.gene030840:CDS
GATGTCCCGTGTAGTGGAGA+TGG 0.622673 4.2:-11556161 MS.gene030840:CDS
GGAAGATGACATTACTAGTG+TGG 0.624217 4.2:-11553824 MS.gene030840:CDS
AGGTATATGACAAGAGCAGT+TGG 0.624400 4.2:-11553960 MS.gene030840:CDS
GATGATATCCGGAAAGCACA+TGG 0.628461 4.2:+11552253 None:intergenic
GAGCAACCATGGGTAGAGGA+AGG 0.629891 4.2:-11558897 None:intergenic
CAATATCAGGGCAAATGGAG+AGG 0.631567 4.2:-11553233 MS.gene030840:CDS
ATAATAACCACGCAACAACC+AGG 0.639292 4.2:+11552082 None:intergenic
ATTCTAAATGATGCAGGCAA+TGG 0.639368 4.2:+11558658 None:intergenic
CATATGAGACTACCTGGCAG+AGG 0.641063 4.2:+11553640 None:intergenic
TTCCTCTAGAGCATTGCATG+AGG 0.643867 4.2:-11553723 MS.gene030840:CDS
TTTGATGGAGGAGTCTGCTG+AGG 0.644695 4.2:-11553758 MS.gene030840:CDS
GAATGCACATCCAAGAATAG+GGG 0.644846 4.2:+11556739 None:intergenic
ACGTGAAGAACGGAATTCTG+AGG 0.648938 4.2:-11553318 MS.gene030840:CDS
GCCAGGTCTCAAGAAATGGA+AGG 0.649652 4.2:-11554625 MS.gene030840:intron
TAGTAATTGTAATGTTGACA+TGG 0.651091 4.2:-11553845 MS.gene030840:CDS
TGCACATCCAAGAATAGGGG+AGG 0.651957 4.2:+11556742 None:intergenic
AGTGTACCATCTCCACTACA+CGG 0.655332 4.2:+11556155 None:intergenic
ACTAGAGAATCCTTTGATGG+AGG 0.658377 4.2:-11553770 MS.gene030840:CDS
GTGTACCATCTCCACTACAC+GGG 0.658766 4.2:+11556156 None:intergenic
AATTATACAGGCATCTCCCG+AGG 0.660476 4.2:-11552191 MS.gene030840:CDS
GGAAGAATCAAACATTGGAG+AGG 0.660823 4.2:-11558285 MS.gene030840:intron
GTAAGGCACCTGATATGTGG+CGG 0.665415 4.2:-11556130 MS.gene030840:CDS
GCTTTCCGGATATCATCCGA+AGG 0.673685 4.2:-11552247 MS.gene030840:CDS
ACCTAGCAAACAGAGTCTTG+AGG 0.674715 4.2:-11553462 MS.gene030840:CDS
AAATGAAGCTGTGGTTGCAG+AGG 0.679409 4.2:-11555015 MS.gene030840:intron
GTCCATTGCAGAGACCATCA+CGG 0.681705 4.2:+11551884 None:intergenic
TTATCTTTACTCAAAATCGG+GGG 0.696495 4.2:-11555077 MS.gene030840:CDS
TCAGCAACTGAAAATGACCT+CGG 0.702374 4.2:-11553021 MS.gene030840:CDS
AGTCGTCAAAGCAGTTCCAG+AGG 0.703422 4.2:-11553396 MS.gene030840:CDS
AAACATCTTCATGCCAACCG+AGG 0.713060 4.2:+11553004 None:intergenic
GTTTCAGATGAATTCATGTG+CGG 0.725014 4.2:+11553428 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 11551725 11558911 11551725 ID=MS.gene030840
chr4.2 mRNA 11551725 11558911 11551725 ID=MS.gene030840.t1;Parent=MS.gene030840
chr4.2 exon 11558649 11558911 11558649 ID=MS.gene030840.t1.exon1;Parent=MS.gene030840.t1
chr4.2 CDS 11558649 11558911 11558649 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11558492 11558558 11558492 ID=MS.gene030840.t1.exon2;Parent=MS.gene030840.t1
chr4.2 CDS 11558492 11558558 11558492 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11558286 11558401 11558286 ID=MS.gene030840.t1.exon3;Parent=MS.gene030840.t1
chr4.2 CDS 11558286 11558401 11558286 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11557132 11557198 11557132 ID=MS.gene030840.t1.exon4;Parent=MS.gene030840.t1
chr4.2 CDS 11557132 11557198 11557132 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11556719 11556767 11556719 ID=MS.gene030840.t1.exon5;Parent=MS.gene030840.t1
chr4.2 CDS 11556719 11556767 11556719 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11556518 11556603 11556518 ID=MS.gene030840.t1.exon6;Parent=MS.gene030840.t1
chr4.2 CDS 11556518 11556603 11556518 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11556125 11556375 11556125 ID=MS.gene030840.t1.exon7;Parent=MS.gene030840.t1
chr4.2 CDS 11556125 11556375 11556125 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11555992 11556047 11555992 ID=MS.gene030840.t1.exon8;Parent=MS.gene030840.t1
chr4.2 CDS 11555992 11556047 11555992 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11555016 11555101 11555016 ID=MS.gene030840.t1.exon9;Parent=MS.gene030840.t1
chr4.2 CDS 11555016 11555101 11555016 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11554626 11554718 11554626 ID=MS.gene030840.t1.exon10;Parent=MS.gene030840.t1
chr4.2 CDS 11554626 11554718 11554626 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11553653 11553980 11553653 ID=MS.gene030840.t1.exon11;Parent=MS.gene030840.t1
chr4.2 CDS 11553653 11553980 11553653 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11553004 11553497 11553004 ID=MS.gene030840.t1.exon12;Parent=MS.gene030840.t1
chr4.2 CDS 11553004 11553497 11553004 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11552074 11552308 11552074 ID=MS.gene030840.t1.exon13;Parent=MS.gene030840.t1
chr4.2 CDS 11552074 11552308 11552074 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
chr4.2 exon 11551725 11551987 11551725 ID=MS.gene030840.t1.exon14;Parent=MS.gene030840.t1
chr4.2 CDS 11551725 11551987 11551725 ID=cds.MS.gene030840.t1;Parent=MS.gene030840.t1
Gene Sequence

>MS.gene030840

ATGGGTAGAGGAAGGTCACGAACTCAAAGAAAGGACTTTCGTCAAAACAGAGAAAACGTTTGGAAGCGTTCGAAACCAGATCCAGACCCTTCCTTATCCTCCGAAAATTCTCAAACTACTACTCATTGGACTCCTTTCTTGACTCAAAACCCTTCCTTTGATTCTTATTACAAGGAACAGTTAATTGTTGATCCACAAGAATGGGATCAATTCATCGCAGTTCTCCGAACACCATTGCCTGCATCATTTAGAATCAATTCTAGGTATATAATTAATTTGCACTATCAATATTCACATTCATTTCTAGTTTCTTATTTATTTAAATGAATTTTGTGTTTGTTTGGTTATTGCAGTAGTCAATTTGCTGATGATATTCGTTCCCAATTGGAAAATGATTTCGTGCATTCACTTCGCGCTGAGGTATTAAAAATGATTATGGTGTAACTGTTTTTTTTTTTTTTTTTTAGTTTGTGTATGTGATTATAATTTATGTGAATTGGTTATTTGTAGGTTGCTGAAGGAGGTGAGACAGAGGCGATTCGGCCTTTGCCCTGGTATCCCGGGAACTTTGCTTGGCATTCAAATTTTTCGCGGATGCAGCTTAGGAAGAATCAAACATTGGAGAGGTGAATGTTTTCTGTTGATATATGAGTTGCATTCGATTGTGTGACATTTATAGAACCAACAAAAGTATTAGGGATATTCCTGCTTTTTTCGCTTCTCGGAGTGTATTAAGAATATCGATCTTGTCACAATTAAGATTTGAATGCATATATTTTGTATGAATGTATTGATGTGTTGTTTTATGACTTAAAATTTTTACCAGTTTGTCACTACTCAGTACTCACCAAATGTTCTTCCCTTCCTTAATATAGGCCTTCCCGCTAAAACAGAATTTTGGATGTTTTTCAGAATACAATTAGACTAGTTACTAGCTACTTGAGTAGTTTTTGTTGTTTATCTCATGAAAATGTTGTTATCTCTAAGTATAATAAGTAATATTTTCTGGGCCTAATTAACTTGTTTATTTGACAATGATAATCTTAGTGTTTTGCTATCCATTGGTTTGAAATGGGAACGGAGTTGACAAGTTGGTTAAAAAGATATCAATATCAGGGGATCTCAGTCAGGATACAGAAATTTTAATACAAATATGCTCTCTCTTCCCAATATTACATGCTTTATTTTTTTTTTCTTTCTGAAAATAGAATAGTAGCAGACTATTTGGTTATGCATTAAATTGTATGACGATGCAAAACTAGAAACACCATCCTCATGCACGTGCATTGTTTAATTTTCTTTTGTGATCTTATCTACATATACTGCGATTGATCTGTCCTTATTTCTACATGGTATGACTTAGCTCTGGCTTGTTTTCCCCTTTAGAAAATGATTTAGGGATAAGTCATTAATCATTTCTGAAATTGAAGAATATTAAACTAATTTAGCTCTGGCTTATCTACATATACTGTCGATCTTTAGTTTACATATAGCCCTTGAAGTTGGAGGAGTCATTGGGCACAATTGTTCATGCATTTATCTTTATTTCACACTCAGCAGACAAGCTAGACAAACACAGACATCAACACGAATGAACATGATAGTGTCAAACCATTAACTGAAATTAAAATTATCGAACAATGAGTAACTAGTATTACTTTATTATTATGATTGATATTTCAATTGCTGCCTCTGATTCTGCTAAATTCTCAGGTTCCACGAATTTTTAAAGCTAGAAAATGAAATTGGAAATATCACAAGACAGGAAGCTGTTAGTATGGTGAGTCCACTTTATATTCTCTTTCAATCTTCATGATCATACAAAAGGATTTTTTTTTTGTTCTAGTACTCTGAATGGTTCAGTACCCGTAGGTTACTGCTACTTTTTACGTTTTAAGAATGAGTGTTGCTATATATTACAGAGTTTACACAGGAATTGAAAGAAAAGTGAAGAGGCGGGTTTTAAGAAGAAAAATACACACACACACACGCAATGATACTTTAACAGAAATCACGGCTGTTGCGTAGTGATAATCTACGGATCTTAACATGTTCGTGCATTTCGTCGTTGTTTTGTGTTTCGTAAGAATAAGCTTTATCCTTTAAGAATTTATTTATGTCTCTAATGTTTGTTTTTGACATAGGTTCCTCCCCTATTCTTGGATGTGCATTCAGACCATTTTGTACTTGACAGTAAGCTACTTATGGTGCTCAAAGTATCCTCTGTTTTTTACCAGTCCTGATTCGATTTGCTTAATTTGAAATGCAAGCTTTGTTTTTTCTGACCTTTCATTTTTCTTTGTTTTAGTGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTCGAGACTATACACCAATCCACAAAAGCAGGATCACTGCCTGATGGAATGGTTTGTGTCATTTTACTTTTGTGCCATTTTTAATTGCTTTGATTGTCAATTGTTTTTGGACTCAATAGTTTGCTAAAATTATTGGGTAAAACAGCATGCTGCATTTGCAACATTTGCTAACTAGTTTCTTATTTGTAATTAGGTTGTAGCAAATGATCTTGATGTTAAAAGATGTAATCTTCTCATCCATCAAACAAAAAGAATGTCCACAGCCAACCTAATTGTTACTAATCATGAAGCACAACATTTCCCAGGATGCCGTTTAAAAGGGAATTATGAAAGAATGGAGTTAGATCACAATATTCACCAACTGTTATTTGATCGTGTTCTGTGCGATGTCCCGTGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATATGTGGCGGAAATGGTAGTTTCAATTTCTTCTCCAATTCTACTTTCTTTACAACCTAAAATATTTTTTAAGACTTATTTTACTTTCTGCAGGAATTCAGGGATGGGACAAGGGCTTCACAGCCTACAAGTTTTAATTGCTATGCGAGGTACTTTCTGAATATTTTACATATATTTTAGGGCTTGTCGTTGTTAGGCTTTTGTTTTCGTTTCCTTATCTAGTGTTTTCACTGTGCTCAAATTTGTTGGCTTTTTCCAATTAGAAAATTGGTAATAGGCAATGAAGGTTGGCTCACCAATTTGACCTCTTGCTCAAGAAATTTCGATGACTTTGATTTTAATCCTGGCGTCCTCTGCTCGCAGGGGATACAAAATTTTATTGCAAATCTTCCTCGAGGTTGGGGGATTCTGAGTTGTCTTTCCCTTGGAATGATAGCCTCCCCTCATCCTAAAAACTTTGTAATCATTTGAAAGAAAAAGATTGATAATAAGATGACGCAAGTCTAACCTGATAATGGGTTAATTTTGTGCTTTTGTGCATGCTCATAAATTGAACCAAACTAGATTTGTCATAGTTATCTGGCATGGCGAATTGGACATTTAGATTTAGTCACAAAAAGTTAATGGAGACTTTAACTGAGTTATCCTTCTGTTTGAAATTTGTAACCTACCATTGAGTGAAAACTGAAAACCTTTTGTTCTTCCAGATTAATATTGCTCCTTATATGTTTTAAAGGGCACACACTCGTATAATGTTGAATTGAGTGAATACCTTTTGTTCTTCCAGATTAATACCGCTCCTTATATGTTTTAAAGAGCACACACTTGTATAATGTTGAGCCTCAAGGAGTAGAGTGGCAGCTTCTATATGTCATGTTTGTTATGTATCTTCTGAAGCTGAAAAACATTATTTTGCAGCAAGGATTAACTTTGTATTATGTTGCTTACATATCTAGGTCTTTTATTGTCTTAAATGAATAGAAATGAATTTGTGAGAGTTATATTGCAGCAACCTCAACAACTATATTGATTATCTCAGGTTTATCTTTACTCAAAATCGGGGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAAAATGAAGCTGTGGTTGCAGAGGTAATCTACTTTGAGTGCTCTATACTTTTGTGAAGCCCTGCTAGTTGCAGGCTTGACTCAGAAAAGTGCTTTGGTATATTAAATAAGCTAACCGCTAATTACCTTCGAAGCACGGTATACTAATTTCTTAGGCATAACTGTACCGTGTTCATAAAATTTATGGATGAGCCTTACATACACACTTAGAAAAAATTCAACACGGAGAAATAGGTAGATCTCCGACCCAGTACATGAAAATCTAATAAGGAGCTGTGCTCAATTCCATTTTTCTTTATCCCCTCTTTTACTGTTTTGCAGGTTTTGCGGAGGTGTGGTGAGTCTGTCAAACTTGTTGACGTGTCTAGTGAGCTTCCACAACTTATTCGTCGGCCAGGTCTCAAGAAATGGAAGGTTTGTGTTTTCTGTGTTCGATTGAACATACTCTCTTTTTTTCATTCACCAAACCGAGTTTTGATTTTAATACATTCAATATTAAAAAAACAAATATGCTATTTACCTATACATTCTAAAGTTTTAGTGGATTCCTGGGTTTTCTGGATATCATGTCCTTTAATATTATGCAATGATACAATCTGAAGGATTTTGAAGGAAAATAATGGGTGGTTTCTTTCTTAGTTTCCAATGATTTTTTAATGTAATTGGTGTTTCATATAGGGCAGTAGTTGTGGGTAAAATACCCTGGAGCCTGGTAGTTATGCCTCTTCTGATTCGAGCTTTTGAATATTTTGCTGATTTGCATTTGTTTGGAATGTGTCTTGTTGTAAATAATTCTAATCAAATTCTGACATTCAATCAGTTGGATGCCCATCAATATGCTTACATTAACACATTGATGGTTTAATAAGAAAATAGTTTAAAAAATTTATGAGCATAAAATACTTATATTGATCCAACTTTAGCATGTAACCTCGCACCTGTTGGTTTTGCACTTGATTCAGCTTATGGCTTCAAATATAGAAGGGTCAAGCTTTTCTCATAGCAGTATGCTTTTGATTTTTTATTTTTTTTTAAAGTTGTTTGATTTTTGAGGTGCAGGTATATGACAAGAGCAGTTGGTTTGTCTCTTCCAAAGATGTTCCCAAGTTCCGTAGAAGTGTGATTCTTTCCAGTATGTTTCCTTCTGGCAAATGCTATCAGGATCTTGGCGATAGTAATTGTAATGTTGACATGGAAGATGACATTACTAGTGTGGAAAATGAAAAAACTGAAGATGGTATTGAAGCACTAGAGAATCCTTTGATGGAGGAGTCTGCTGAGGAAGTTTCAGATTTTCCTCTAGAGCATTGCATGAGGATAATGCCTCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTGCTGCAAAAAGTTTCTCCTCTGCCAGGTAGTCTCATATGTAATAACATCCTCTCTCTCTCTCTCTCACACACTAAATAGTCAGGAAATTTTGGTTAATAAGGGAAATAATTCCAAGTTCGTATATATTCATTTTAACTGGACTTTTGCTCATAATAGGTTTTTTTGTTTCCGTTCTTGCAGCTATTCTGGAAAAACCTAGCAAACAGAGTCTTGAGGATGCACAAGCACCGCACATGAATTCATCTGAAACTACACTTGAAGTCGTCAAAGCAGTTCCAGAGGAAAATGTGAATGATAATGTATCCCATACAGATGATTTGGAAGATAGTCCTCTAACACGTGAAGAACGGAATTCTGAGGAAACTGAAGAACCGCATAATGCACAAAACACAGCAGAGAAGGTTCCAGGTAAAAGAAAGCTACAATATCAGGGCAAATGGAGAGGTGTTGACCCTGTTGTCTTTTTTAAAGATGAAGCAATTGTTAACAGTATAAAGAATTTTTATGGAATCGATGAGCGCTTTCCATTTGATGGTCACCTTGTTACACGAAACATTGATAACAGTAATGCAAAAAGAATTTACTATGTCTCCAAGTCAGTCAAGGATATTGTTGCGTTGAACTTCTCGGTTGGTCAGCAACTGAAAATGACCTCGGTTGGCATGAAGATGTTTGTAAGTATACTTTATTCTCATTTTAGAGATATATTGTTGTTTTTGTTAAGACTTTTTTTATTACATGATGGATTTATTTGTCACCCATTTTCCTGATTTGAATAAATAATAATTTGTGTAGACGATAATAATTTCATGAGAGACATTCAGTCAGACTTTGAAGAATTTAATTAAATAGATATTAAAGAAGTCAAAGATAATTATATCTCTTGGCCTCTATTAGAGTTAGATACTAGTACTCCATAGATCATTTAATGAACTTGAGTACTTGTTTTGTTGGCTCAAATTTTAACTGCATGTTGAGTTTTATTGGAAATAAATTATAGTCAAGCATTCATATCTTTTTTTTTTGAGGGAAGCATTCATATCTTATTTTTGACATAATTTGTAAGGATTATGTGTAATATAATAACAAATTAATTTATTTAGAACTGCATCACAAACCTAATTCTTCTATGTGTCATTCTAGCACAGCAACACAATTACACAAATAGCATGCACGTTACAAGGTATTGACACGATCTATTGACACGATCTACAGTACTAAATTAGTTTCGTCAAGGAGTTTGTTAGATAAATCTATTATTATTTGAATGGTATGACAGTCCATGAATGAGTGAGATATAAGTTTTTGTTTGTTTTTTATTACTGCTTGTGAATAACTGGGTGAAATGTACTTTGCCCTTATCTTACAGGAAAGACAAACAGCACGAGAAGGTGGCTCTTCACCATGTGCTTTCCGGATATCATCCGAAGGATTGCCCCTTATTCTTCCATACATAACCAAGCAAATTATACAGGCATCTCCCGAGGACTTCAAGCGTCTTCTGCAGGACAAAGATGTAAAATATTCAGATTTTGCTGATGCCGAGTTTGGTGAAAAGGCAGCAAACTTATTGCCTGGTTGTTGCGTGGTTATTATGGGTAAAGGTATGTATCGGTGATGAAGAAGAAAAGGTTAATCTGTACCCATTGACATTGACATATCTGTTGAGCGGCATTTTCCTTTTCTGCAGGGAATACAGTTGCAACAGAATCCCTCAAAGTTGACGAGTCAACAATAGCAATCGGATGCTGGAGGGGTAGGGCGAGGTTGTCCGTGATGGTCTCTGCAATGGACTGCCAAGAATTGCTTGCAAGACTTTTAATACGTCTAGGCACAGAAAATGGCTCTTCTGGGCAGGTGGACAATTCCTCTAACTATGTTGGAGGTGAAGCACAGGCTGTACAGGAGTTGAACGATAAAAGTGATAATGATTTGAAAGCTGCTGTGAGTTAG
Protein sequence

>MS.gene030840.t1

MGRGRSRTQRKDFRQNRENVWKRSKPDPDPSLSSENSQTTTHWTPFLTQNPSFDSYYKEQLIVDPQEWDQFIAVLRTPLPASFRINSSSQFADDIRSQLENDFVHSLRAEVAEGGETEAIRPLPWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLETIHQSTKAGSLPDGMVVANDLDVKRCNLLIHQTKRMSTANLIVTNHEAQHFPGCRLKGNYERMELDHNIHQLLFDRVLCDVPCSGDGTLRKAPDMWRKWNSGMGQGLHSLQVLIAMRGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGESVKLVDVSSELPQLIRRPGLKKWKVYDKSSWFVSSKDVPKFRRSVILSSMFPSGKCYQDLGDSNCNVDMEDDITSVENEKTEDGIEALENPLMEESAEEVSDFPLEHCMRIMPHDQNTGAFFIAVLQKVSPLPAILEKPSKQSLEDAQAPHMNSSETTLEVVKAVPEENVNDNVSHTDDLEDSPLTREERNSEETEEPHNAQNTAEKVPGKRKLQYQGKWRGVDPVVFFKDEAIVNSIKNFYGIDERFPFDGHLVTRNIDNSNAKRIYYVSKSVKDIVALNFSVGQQLKMTSVGMKMFERQTAREGGSSPCAFRISSEGLPLILPYITKQIIQASPEDFKRLLQDKDVKYSDFADAEFGEKAANLLPGCCVVIMGKGNTVATESLKVDESTIAIGCWRGRARLSVMVSAMDCQELLARLLIRLGTENGSSGQVDNSSNYVGGEAQAVQELNDKSDNDLKAAVS