Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57325.t1 | KEH20796.1 | 94.6 | 818 | 43 | 1 | 1 | 817 | 1 | 818 | 0.00E+00 | 1539.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57325.t1 | Q5ZLV4 | 37.1 | 720 | 369 | 18 | 49 | 761 | 44 | 686 | 3.4e-120 | 434.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57325.t1 | A0A072TUE4 | 94.6 | 818 | 43 | 1 | 1 | 817 | 1 | 818 | 0.0e+00 | 1539.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene57325 | 0.812922 | 3.32E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene57325 | 0.814883 | 1.23E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene57325 | 0.806592 | 7.63E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene57325 | 0.821681 | 3.55E-53 | -1.69E-46 |
| MS.gene053895 | MS.gene57325 | -0.807871 | 4.09E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene57325 | 0.801817 | 7.53E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene57325 | 0.817705 | 2.87E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene57325 | 0.805878 | 1.08E-49 | -1.69E-46 |
| MS.gene056403 | MS.gene57325 | 0.818469 | 1.93E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene57325 | 0.814066 | 1.86E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene57325 | 0.846182 | 2.55E-59 | -1.69E-46 |
| MS.gene061006 | MS.gene57325 | 0.810465 | 1.14E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene57325 | 0.803848 | 2.87E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57325.t1 | MTR_8g089980 | 96.577 | 818 | 27 | 1 | 1 | 817 | 1 | 818 | 0.0 | 1640 |
| MS.gene57325.t1 | MTR_3g086950 | 66.794 | 783 | 222 | 9 | 1 | 767 | 1 | 761 | 0.0 | 1055 |
| MS.gene57325.t1 | MTR_3g460700 | 30.876 | 217 | 118 | 6 | 166 | 378 | 296 | 484 | 4.62e-18 | 89.4 |
| MS.gene57325.t1 | MTR_5g096020 | 33.728 | 169 | 86 | 7 | 185 | 351 | 340 | 484 | 1.26e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57325.t1 | AT2G22400 | 60.569 | 809 | 273 | 15 | 8 | 788 | 11 | 801 | 0.0 | 970 |
| MS.gene57325.t1 | AT4G40000 | 57.016 | 791 | 294 | 10 | 1 | 773 | 1 | 763 | 0.0 | 873 |
| MS.gene57325.t1 | AT4G40000 | 55.035 | 576 | 216 | 9 | 216 | 773 | 1 | 551 | 0.0 | 607 |
| MS.gene57325.t1 | AT4G26600 | 29.730 | 296 | 157 | 12 | 166 | 445 | 327 | 587 | 4.48e-17 | 86.3 |
| MS.gene57325.t1 | AT4G26600 | 29.730 | 296 | 157 | 12 | 166 | 445 | 327 | 587 | 4.76e-17 | 86.3 |
| MS.gene57325.t1 | AT5G55920 | 30.244 | 205 | 111 | 6 | 161 | 359 | 339 | 517 | 2.38e-16 | 84.0 |
| MS.gene57325.t1 | AT4G26600 | 31.313 | 198 | 108 | 4 | 166 | 359 | 327 | 500 | 3.46e-16 | 82.8 |
| MS.gene57325.t1 | AT4G26600 | 29.954 | 217 | 120 | 5 | 166 | 378 | 327 | 515 | 3.80e-16 | 82.8 |
| MS.gene57325.t1 | AT3G13180 | 31.361 | 169 | 90 | 4 | 185 | 351 | 334 | 478 | 5.19e-13 | 72.8 |
Find 183 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCAGGATGCCGTTTAAA+AGG | 0.190650 | 4.1:-10581592 | MS.gene57325:CDS |
| TAAAAGAAAGCTACAATATC+AGG | 0.193012 | 4.1:-10578588 | MS.gene57325:CDS |
| TTTACTTTCTGCAGGAATTC+AGG | 0.226926 | 4.1:-10581383 | MS.gene57325:intron |
| TTCCGTTCTTGCAGCTATTC+TGG | 0.233522 | 4.1:-10578831 | MS.gene57325:intron |
| GCTCTTCACCATGTGCTTTC+CGG | 0.245863 | 4.1:-10577602 | MS.gene57325:CDS |
| CTTCATGATTAGTAACAATT+AGG | 0.246866 | 4.1:+10581623 | None:intergenic |
| TGGTTGTTGCGTGGTTATTA+TGG | 0.247821 | 4.1:-10577421 | MS.gene57325:CDS |
| TTAAAGCTAGAAAATGAAAT+TGG | 0.254499 | 4.1:-10582509 | MS.gene57325:CDS |
| GGCACAGAAAATGGCTCTTC+TGG | 0.261873 | 4.1:-10577166 | MS.gene57325:CDS |
| CTTTCCAGTATGTTTCCTTC+TGG | 0.278031 | 4.1:-10579236 | MS.gene57325:CDS |
| TCCTTCTGGCAAATGCTATC+AGG | 0.284071 | 4.1:-10579222 | MS.gene57325:CDS |
| CATCATTTAGAATCAATTCT+AGG | 0.285604 | 4.1:-10583991 | MS.gene57325:intron |
| GGTTTATCTTTACTCAAAAT+CGG | 0.300019 | 4.1:-10580424 | MS.gene57325:CDS |
| AAAGTCTTGCAAGCAATTCT+TGG | 0.304314 | 4.1:+10577200 | None:intergenic |
| ACGGAACTTGGGAACATCTT+TGG | 0.305209 | 4.1:+10579271 | None:intergenic |
| TTCCGTTCTTCACGTGTTAG+AGG | 0.306424 | 4.1:+10578668 | None:intergenic |
| ATAGGTTCCTCCCCTATTCT+TGG | 0.312286 | 4.1:-10582093 | MS.gene57325:intron |
| TGCATCCCATACAGATGATT+TGG | 0.318756 | 4.1:-10578699 | MS.gene57325:CDS |
| TGGTTATGTATGGAAGAATA+AGG | 0.325256 | 4.1:+10577559 | None:intergenic |
| ATACGTCTAGGCACAGAAAA+TGG | 0.356138 | 4.1:-10577175 | MS.gene57325:CDS |
| TACCATTTCCGCCACATATC+AGG | 0.360042 | 4.1:+10581466 | None:intergenic |
| GGTTGTTGCGTGGTTATTAT+GGG | 0.360528 | 4.1:-10577420 | MS.gene57325:CDS |
| GTCAAAACAGAGAAAACGTT+TGG | 0.362743 | 4.1:-10584192 | MS.gene57325:CDS |
| CGGCCTTTGCCCTGGTATCC+CGG | 0.363804 | 4.1:-10583695 | MS.gene57325:CDS |
| TTGAGGGATTCTGTTGCAAC+TGG | 0.379975 | 4.1:+10577301 | None:intergenic |
| GTTTATCTTTACTCAAAATC+GGG | 0.381887 | 4.1:-10580423 | MS.gene57325:CDS |
| CTGAATGCACATCCAAGAAT+AGG | 0.383509 | 4.1:+10582081 | None:intergenic |
| AATCACACTTCTACGGAACT+TGG | 0.388539 | 4.1:+10579259 | None:intergenic |
| TATCTTCCAAATCATCTGTA+TGG | 0.390960 | 4.1:+10578693 | None:intergenic |
| TGAATGCACATCCAAGAATA+GGG | 0.393782 | 4.1:+10582082 | None:intergenic |
| GCTTACTGTCAAGTACAAAA+TGG | 0.398024 | 4.1:+10582057 | None:intergenic |
| AACACAGCAGAGAAGGTTCC+AGG | 0.405306 | 4.1:-10578611 | MS.gene57325:CDS |
| AGCAAAGTTCCCGGGATACC+AGG | 0.408224 | 4.1:+10583685 | None:intergenic |
| AGCTACAATATCAGGGCAAA+TGG | 0.412664 | 4.1:-10578580 | MS.gene57325:CDS |
| TTACTTTCTGCAGGAATTCA+GGG | 0.413804 | 4.1:-10581382 | MS.gene57325:intron |
| GTCGGCCAGGTCTCAAGAAA+TGG | 0.414879 | 4.1:-10579973 | MS.gene57325:CDS |
| CACCTGATATGTGGCGGAAA+TGG | 0.415761 | 4.1:-10581468 | MS.gene57325:intron |
| AAGACAGGAAGCTGTTAGTA+TGG | 0.418992 | 4.1:-10582477 | MS.gene57325:intron |
| TATTGTTGCGTTGAACTTCT+CGG | 0.421626 | 4.1:-10578390 | MS.gene57325:CDS |
| CAATCGGATGCTGGAGGGGT+AGG | 0.425361 | 4.1:-10577258 | MS.gene57325:CDS |
| TTCACCTCCAACATAGTTAG+AGG | 0.427601 | 4.1:+10577129 | None:intergenic |
| ATAATTTGCTTGGTTATGTA+TGG | 0.434010 | 4.1:+10577549 | None:intergenic |
| GCATAGCAATTAAAACTTGT+AGG | 0.441578 | 4.1:+10581339 | None:intergenic |
| GGTTATGTATGGAAGAATAA+GGG | 0.441749 | 4.1:+10577560 | None:intergenic |
| TGAATGCCAAGCAAAGTTCC+CGG | 0.442297 | 4.1:+10583676 | None:intergenic |
| ATTCTCAAACTACTACTCAT+TGG | 0.443034 | 4.1:-10584126 | MS.gene57325:CDS |
| GGTGTATAGTCTCGAGCAAT+TGG | 0.445281 | 4.1:+10581897 | None:intergenic |
| TTGTTGACTCGTCAACTTTG+AGG | 0.446066 | 4.1:+10577284 | None:intergenic |
| TCGGAGGATAAGGAAGGGTC+TGG | 0.446587 | 4.1:+10584151 | None:intergenic |
| AATTGTTGATCCACAAGAAT+GGG | 0.449501 | 4.1:-10584050 | MS.gene57325:CDS |
| GGCAAATGCTATCAGGATCT+TGG | 0.450132 | 4.1:-10579215 | MS.gene57325:CDS |
| GGTATCCCGGGAACTTTGCT+TGG | 0.450478 | 4.1:-10583682 | MS.gene57325:CDS |
| TGTTGACTCGTCAACTTTGA+GGG | 0.452988 | 4.1:+10577285 | None:intergenic |
| AAAAGGGAATTATGAAAGAA+TGG | 0.453153 | 4.1:-10581575 | MS.gene57325:CDS |
| TGATGATATTCGTTCCCAAT+TGG | 0.458564 | 4.1:-10583867 | MS.gene57325:CDS |
| GATAAGGAAGGGTCTGGATC+TGG | 0.459026 | 4.1:+10584157 | None:intergenic |
| GCACAGAAAATGGCTCTTCT+GGG | 0.461885 | 4.1:-10577165 | MS.gene57325:CDS |
| TCCTCAAGACTCTGTTTGCT+AGG | 0.463373 | 4.1:+10578803 | None:intergenic |
| GGACTTCAAGCGTCTTCTGC+AGG | 0.467959 | 4.1:-10577511 | MS.gene57325:CDS |
| TGCGTGGTTATTATGGGTAA+AGG | 0.468510 | 4.1:-10577414 | MS.gene57325:intron |
| GCAATCCTTCGGATGATATC+CGG | 0.470647 | 4.1:+10577583 | None:intergenic |
| GATGCTGGAGGGGTAGGGCG+AGG | 0.471870 | 4.1:-10577252 | MS.gene57325:CDS |
| TTCCTTTGATTCTTATTACA+AGG | 0.477035 | 4.1:-10584080 | MS.gene57325:CDS |
| AGGTGAAGCACAGGCTGTAC+AGG | 0.479774 | 4.1:-10577113 | MS.gene57325:CDS |
| GGCCTTTGCCCTGGTATCCC+GGG | 0.479981 | 4.1:-10583694 | MS.gene57325:CDS |
| TCCCAGGATGCCGTTTAAAA+GGG | 0.480126 | 4.1:-10581591 | MS.gene57325:CDS |
| ATGATTAGTAACAATTAGGT+TGG | 0.480820 | 4.1:+10581627 | None:intergenic |
| GAGGTGAGACAGAGGCGATT+CGG | 0.481360 | 4.1:-10583715 | MS.gene57325:CDS |
| CATAACCAAGCAAATTATAC+AGG | 0.483742 | 4.1:-10577544 | MS.gene57325:CDS |
| TAGGGCGAGGTTGTCCGTGA+TGG | 0.485207 | 4.1:-10577239 | MS.gene57325:CDS |
| TAATTGTTGATCCACAAGAA+TGG | 0.487617 | 4.1:-10584051 | MS.gene57325:CDS |
| AGATGCCTGTATAATTTGCT+TGG | 0.489845 | 4.1:+10577539 | None:intergenic |
| TTTGCCAGAAGGAAACATAC+TGG | 0.491351 | 4.1:+10579232 | None:intergenic |
| AATCGGATGCTGGAGGGGTA+GGG | 0.491437 | 4.1:-10577257 | MS.gene57325:CDS |
| CAGAAGACGCTTGAAGTCCT+CGG | 0.494208 | 4.1:+10577515 | None:intergenic |
| ACCTTCCATTTCTTGAGACC+TGG | 0.495511 | 4.1:+10579968 | None:intergenic |
| ATGATGCAGGCAATGGTGTT+CGG | 0.497996 | 4.1:+10584008 | None:intergenic |
| AAGAATAAGGGGCAATCCTT+CGG | 0.498704 | 4.1:+10577572 | None:intergenic |
| TTGCAGCACAGCAATGAAGA+AGG | 0.499587 | 4.1:+10579016 | None:intergenic |
| CAACAATAGCAATCGGATGC+TGG | 0.499828 | 4.1:-10577267 | MS.gene57325:CDS |
| GACAATTCCTCTAACTATGT+TGG | 0.501847 | 4.1:-10577136 | MS.gene57325:CDS |
| GTAACAAGGTGACCATCAAA+TGG | 0.503653 | 4.1:+10578473 | None:intergenic |
| AGAAAATGGCTCTTCTGGGC+AGG | 0.504580 | 4.1:-10577161 | MS.gene57325:CDS |
| AAGGCAGCAAACTTATTGCC+TGG | 0.507560 | 4.1:-10577441 | MS.gene57325:CDS |
| AGGAATTCAGGGATGGGACA+AGG | 0.507941 | 4.1:-10581371 | MS.gene57325:CDS |
| AACAATATCCTTGACTGACT+TGG | 0.510238 | 4.1:+10578406 | None:intergenic |
| AGGCGATTCGGCCTTTGCCC+TGG | 0.513851 | 4.1:-10583703 | MS.gene57325:CDS |
| GTCCGTGATGGTCTCTGCAA+TGG | 0.514638 | 4.1:-10577227 | MS.gene57325:CDS |
| AGGATCACTGCCTGATGGAA+TGG | 0.519136 | 4.1:-10581861 | MS.gene57325:intron |
| GACGAGTCAACAATAGCAAT+CGG | 0.521462 | 4.1:-10577274 | MS.gene57325:CDS |
| AGAAGACGCTTGAAGTCCTC+GGG | 0.525989 | 4.1:+10577516 | None:intergenic |
| ATGACACAAACCATTCCATC+AGG | 0.526171 | 4.1:+10581851 | None:intergenic |
| TCAGCAGACTCCTCCATCAC+AGG | 0.530698 | 4.1:+10579104 | None:intergenic |
| ACCAGAGCAACCATGGGTAG+AGG | 0.533404 | 4.1:-10584244 | None:intergenic |
| GGTTATTTGTAGGTTGCTGA+AGG | 0.535471 | 4.1:-10583737 | MS.gene57325:intron |
| GTTGCGTTGAACTTCTCGGT+TGG | 0.536011 | 4.1:-10578386 | MS.gene57325:CDS |
| TGATGCCGAGTTTGGTGAAA+AGG | 0.538887 | 4.1:-10577460 | MS.gene57325:CDS |
| CAACTGAAAATGACCTCGGT+TGG | 0.539529 | 4.1:-10578359 | MS.gene57325:CDS |
| TTCCTTGTAATAAGAATCAA+AGG | 0.539742 | 4.1:+10584078 | None:intergenic |
| CGTGCATTCACTTCGCGCTG+AGG | 0.542110 | 4.1:-10583834 | MS.gene57325:intron |
| ATCTTCCAAATCATCTGTAT+GGG | 0.545899 | 4.1:+10578694 | None:intergenic |
| CCACAACTTATTCGTCGGCC+AGG | 0.547313 | 4.1:-10579986 | MS.gene57325:CDS |
| TTGTAATAAGAATCAAAGGA+AGG | 0.549320 | 4.1:+10584082 | None:intergenic |
| TGGAAAGAATCACACTTCTA+CGG | 0.550513 | 4.1:+10579252 | None:intergenic |
| AGTAACAATTAGGTTGGCTG+TGG | 0.551773 | 4.1:+10581633 | None:intergenic |
| ATCACACTTCTACGGAACTT+GGG | 0.552405 | 4.1:+10579260 | None:intergenic |
| TCCTGATAGCATTTGCCAGA+AGG | 0.552899 | 4.1:+10579221 | None:intergenic |
| TCGTGACCTTCCTCTACCCA+TGG | 0.553571 | 4.1:+10584234 | None:intergenic |
| TTTATCTTTACTCAAAATCG+GGG | 0.553832 | 4.1:-10580422 | MS.gene57325:CDS |
| TGTAATAAGAATCAAAGGAA+GGG | 0.556130 | 4.1:+10584083 | None:intergenic |
| AAATGGCTCTTCTGGGCAGG+TGG | 0.556454 | 4.1:-10577158 | MS.gene57325:CDS |
| ATACACCAATCCACAAAAGC+AGG | 0.557146 | 4.1:-10581881 | MS.gene57325:CDS |
| TGCACAAAACACAGCAGAGA+AGG | 0.560171 | 4.1:-10578618 | MS.gene57325:CDS |
| AGCTTCCACAACTTATTCGT+CGG | 0.560441 | 4.1:-10579991 | MS.gene57325:CDS |
| CTGTGCGATGTCCCGTGTAG+TGG | 0.563031 | 4.1:-10581511 | MS.gene57325:CDS |
| AATTGGAAATATCACAAGAC+AGG | 0.565338 | 4.1:-10582492 | MS.gene57325:CDS |
| CTATGTTGGAGGTGAAGCAC+AGG | 0.566402 | 4.1:-10577122 | MS.gene57325:CDS |
| ATCCTCATGCAATGCTCTAG+AGG | 0.566410 | 4.1:+10579065 | None:intergenic |
| GAATGCCAAGCAAAGTTCCC+GGG | 0.567018 | 4.1:+10583677 | None:intergenic |
| TTCTGCAGGAATTCAGGGAT+GGG | 0.568230 | 4.1:-10581377 | MS.gene57325:intron |
| TTCCCGGGATACCAGGGCAA+AGG | 0.568734 | 4.1:+10583692 | None:intergenic |
| CATGAAGCACAACATTTCCC+AGG | 0.569181 | 4.1:-10581607 | MS.gene57325:CDS |
| TTTCTGCAGGAATTCAGGGA+TGG | 0.570795 | 4.1:-10581378 | MS.gene57325:intron |
| ATGAATTGATCCCATTCTTG+TGG | 0.571295 | 4.1:+10584040 | None:intergenic |
| GTTATGTATGGAAGAATAAG+GGG | 0.573543 | 4.1:+10577561 | None:intergenic |
| GAATTGATTCTAAATGATGC+AGG | 0.577108 | 4.1:+10583995 | None:intergenic |
| AAGGTCACGAACTCAAAGAA+AGG | 0.577671 | 4.1:-10584221 | MS.gene57325:CDS |
| TTCGTAAGGCACCTGATATG+TGG | 0.580986 | 4.1:-10581477 | MS.gene57325:CDS |
| AAAAGAAAGCTACAATATCA+GGG | 0.582226 | 4.1:-10578587 | MS.gene57325:CDS |
| ATAGCAATCGGATGCTGGAG+GGG | 0.584256 | 4.1:-10577262 | MS.gene57325:CDS |
| TGCTGAAGGAGGTGAGACAG+AGG | 0.584654 | 4.1:-10583723 | MS.gene57325:CDS |
| TATCAATGTTTCGTGTAACA+AGG | 0.585607 | 4.1:+10578459 | None:intergenic |
| AATAGCAATCGGATGCTGGA+GGG | 0.585812 | 4.1:-10577263 | MS.gene57325:CDS |
| GGAATTCAGGGATGGGACAA+GGG | 0.587424 | 4.1:-10581370 | MS.gene57325:CDS |
| AATTCCTCTAACTATGTTGG+AGG | 0.587774 | 4.1:-10577133 | MS.gene57325:CDS |
| GTCCTCTAACACGTGAAGAA+CGG | 0.593200 | 4.1:-10578670 | MS.gene57325:CDS |
| TGGAGATGGTACACTTCGTA+AGG | 0.594241 | 4.1:-10581491 | MS.gene57325:CDS |
| TATTTGTAGGTTGCTGAAGG+AGG | 0.594800 | 4.1:-10583734 | MS.gene57325:intron |
| GAACACGATCAAATAACAGT+TGG | 0.595675 | 4.1:+10581533 | None:intergenic |
| GCAAAGTTCCCGGGATACCA+GGG | 0.600427 | 4.1:+10583686 | None:intergenic |
| CTATGTCTCCAAGTCAGTCA+AGG | 0.602696 | 4.1:-10578414 | MS.gene57325:CDS |
| GAAAGACAAACAGCACGAGA+AGG | 0.602807 | 4.1:-10577627 | MS.gene57325:CDS |
| CTTATTGCCTGGTTGTTGCG+TGG | 0.607662 | 4.1:-10577430 | MS.gene57325:CDS |
| AAAGCAGGATCACTGCCTGA+TGG | 0.612819 | 4.1:-10581866 | MS.gene57325:CDS |
| CAATAGCAATCGGATGCTGG+AGG | 0.613159 | 4.1:-10577264 | MS.gene57325:CDS |
| CCTGGCCGACGAATAAGTTG+TGG | 0.613657 | 4.1:+10579986 | None:intergenic |
| AGACAAACAGCACGAGAAGG+TGG | 0.614134 | 4.1:-10577624 | MS.gene57325:CDS |
| GCTCCAGTGTTCTGATCATG+AGG | 0.618002 | 4.1:+10579038 | None:intergenic |
| GCTTAGGAAGAATCAAACAT+TGG | 0.618665 | 4.1:-10583636 | MS.gene57325:CDS |
| TCCTATTGAAAATGAAGCTG+TGG | 0.620217 | 4.1:-10580368 | MS.gene57325:CDS |
| ATGCCTCATGATCAGAACAC+TGG | 0.621782 | 4.1:-10579041 | MS.gene57325:CDS |
| GATGTCCCGTGTAGTGGAGA+TGG | 0.622673 | 4.1:-10581505 | MS.gene57325:CDS |
| GGAAGATGACATTACTAGTG+TGG | 0.624217 | 4.1:-10579168 | MS.gene57325:CDS |
| AGGTATATGACAAGAGCAGT+TGG | 0.624400 | 4.1:-10579304 | MS.gene57325:CDS |
| ACTAGAGAATCCTGTGATGG+AGG | 0.624811 | 4.1:-10579114 | MS.gene57325:CDS |
| GATGATATCCGGAAAGCACA+TGG | 0.628461 | 4.1:+10577594 | None:intergenic |
| GAGCAACCATGGGTAGAGGA+AGG | 0.629891 | 4.1:-10584240 | None:intergenic |
| CAATATCAGGGCAAATGGAG+AGG | 0.631567 | 4.1:-10578575 | MS.gene57325:CDS |
| ATAATAACCACGCAACAACC+AGG | 0.639292 | 4.1:+10577423 | None:intergenic |
| ATTCTAAATGATGCAGGCAA+TGG | 0.639368 | 4.1:+10584001 | None:intergenic |
| CATATGAGACTACCTGGCAG+AGG | 0.641063 | 4.1:+10578984 | None:intergenic |
| TTCCTCTAGAGCATTGCATG+AGG | 0.643867 | 4.1:-10579067 | MS.gene57325:CDS |
| GAATGCACATCCAAGAATAG+GGG | 0.644846 | 4.1:+10582083 | None:intergenic |
| ACGTGAAGAACGGAATTCTG+AGG | 0.648938 | 4.1:-10578660 | MS.gene57325:CDS |
| GCCAGGTCTCAAGAAATGGA+AGG | 0.649652 | 4.1:-10579969 | MS.gene57325:intron |
| TAGTAATTGTAATGTTGACA+TGG | 0.651091 | 4.1:-10579189 | MS.gene57325:CDS |
| TGCACATCCAAGAATAGGGG+AGG | 0.651957 | 4.1:+10582086 | None:intergenic |
| AGCACTAGAGAATCCTGTGA+TGG | 0.653225 | 4.1:-10579117 | MS.gene57325:CDS |
| AGTGTACCATCTCCACTACA+CGG | 0.655332 | 4.1:+10581499 | None:intergenic |
| GTGTACCATCTCCACTACAC+GGG | 0.658766 | 4.1:+10581500 | None:intergenic |
| AATTATACAGGCATCTCCCG+AGG | 0.660476 | 4.1:-10577532 | MS.gene57325:CDS |
| GGAAGAATCAAACATTGGAG+AGG | 0.660823 | 4.1:-10583631 | MS.gene57325:intron |
| GTAAGGCACCTGATATGTGG+CGG | 0.665415 | 4.1:-10581474 | MS.gene57325:CDS |
| GCTTTCCGGATATCATCCGA+AGG | 0.673685 | 4.1:-10577588 | MS.gene57325:CDS |
| ACCTAGCAAACAGAGTCTTG+AGG | 0.674715 | 4.1:-10578804 | MS.gene57325:CDS |
| TGTGATGGAGGAGTCTGCTG+AGG | 0.678814 | 4.1:-10579102 | MS.gene57325:CDS |
| AAATGAAGCTGTGGTTGCAG+AGG | 0.679409 | 4.1:-10580359 | MS.gene57325:intron |
| GTCCATTGCAGAGACCATCA+CGG | 0.681705 | 4.1:+10577225 | None:intergenic |
| TTATCTTTACTCAAAATCGG+GGG | 0.696495 | 4.1:-10580421 | MS.gene57325:CDS |
| TCAGCAACTGAAAATGACCT+CGG | 0.702374 | 4.1:-10578363 | MS.gene57325:CDS |
| AGTCGTCAAAGCAGTTCCAG+AGG | 0.703422 | 4.1:-10578738 | MS.gene57325:CDS |
| AAACATCTTCATGCCAACCG+AGG | 0.713060 | 4.1:+10578346 | None:intergenic |
| GTTTCAGATGAATTCATGTG+CGG | 0.725014 | 4.1:+10578770 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 10577066 | 10584254 | 10577066 | ID=MS.gene57325 |
| chr4.1 | mRNA | 10577066 | 10584254 | 10577066 | ID=MS.gene57325.t1;Parent=MS.gene57325 |
| chr4.1 | exon | 10583992 | 10584254 | 10583992 | ID=MS.gene57325.t1.exon1;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10583992 | 10584254 | 10583992 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10583835 | 10583901 | 10583835 | ID=MS.gene57325.t1.exon2;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10583835 | 10583901 | 10583835 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10583632 | 10583747 | 10583632 | ID=MS.gene57325.t1.exon3;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10583632 | 10583747 | 10583632 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10582478 | 10582544 | 10582478 | ID=MS.gene57325.t1.exon4;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10582478 | 10582544 | 10582478 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10582063 | 10582111 | 10582063 | ID=MS.gene57325.t1.exon5;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10582063 | 10582111 | 10582063 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10581862 | 10581947 | 10581862 | ID=MS.gene57325.t1.exon6;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10581862 | 10581947 | 10581862 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10581469 | 10581719 | 10581469 | ID=MS.gene57325.t1.exon7;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10581469 | 10581719 | 10581469 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10581336 | 10581391 | 10581336 | ID=MS.gene57325.t1.exon8;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10581336 | 10581391 | 10581336 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10580360 | 10580445 | 10580360 | ID=MS.gene57325.t1.exon9;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10580360 | 10580445 | 10580360 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10579970 | 10580062 | 10579970 | ID=MS.gene57325.t1.exon10;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10579970 | 10580062 | 10579970 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10578997 | 10579324 | 10578997 | ID=MS.gene57325.t1.exon11;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10578997 | 10579324 | 10578997 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10578346 | 10578839 | 10578346 | ID=MS.gene57325.t1.exon12;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10578346 | 10578839 | 10578346 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10577415 | 10577649 | 10577415 | ID=MS.gene57325.t1.exon13;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10577415 | 10577649 | 10577415 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| chr4.1 | exon | 10577066 | 10577328 | 10577066 | ID=MS.gene57325.t1.exon14;Parent=MS.gene57325.t1 |
| chr4.1 | CDS | 10577066 | 10577328 | 10577066 | ID=cds.MS.gene57325.t1;Parent=MS.gene57325.t1 |
| Gene Sequence |
| Protein sequence |
