Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036655.t1 | XP_003609505.1 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 4.80E-86 | 327 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036655.t1 | P17093 | 95.0 | 160 | 7 | 1 | 1 | 160 | 1 | 159 | 2.5e-83 | 309.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036655.t1 | B7FMB4 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 3.5e-86 | 327.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036655.t1 | MTR_4g116410 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 5.22e-116 | 325 |
MS.gene036655.t1 | MTR_8g076830 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 1.48e-115 | 323 |
MS.gene036655.t1 | MTR_1g017780 | 93.789 | 161 | 9 | 1 | 1 | 160 | 1 | 161 | 8.06e-100 | 284 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036655.t1 | AT3G48930 | 91.250 | 160 | 14 | 0 | 1 | 160 | 1 | 160 | 3.40e-97 | 277 |
MS.gene036655.t1 | AT5G23740 | 90.000 | 160 | 15 | 1 | 1 | 160 | 1 | 159 | 2.56e-95 | 273 |
MS.gene036655.t1 | AT4G30800 | 90.625 | 160 | 14 | 1 | 1 | 160 | 1 | 159 | 1.36e-93 | 268 |
Find 53 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGGAGATCATGTTATTAT+TGG | 0.232109 | 8.1:+10433961 | MS.gene036655:CDS |
ATGGAAACATTGCCAGTAAA+AGG | 0.250015 | 8.1:-10433693 | None:intergenic |
GGAACCTTCAATGGCTTCTC+TGG | 0.256456 | 8.1:-10432635 | None:intergenic |
TTCTTTAAATCCGTTGGTCT+TGG | 0.342978 | 8.1:+10432601 | MS.gene036655:CDS |
AAGGAGATCATGTTATTATT+GGG | 0.351302 | 8.1:+10433962 | MS.gene036655:CDS |
GCTGGTTCATCCAGTGGTGC+TGG | 0.354296 | 8.1:+10434172 | MS.gene036655:CDS |
TGAATAGGACTATTATTGTT+AGG | 0.366373 | 8.1:+10433757 | MS.gene036655:CDS |
GCTGGGAAGAAGGCATTTAC+TGG | 0.369417 | 8.1:+10434190 | MS.gene036655:CDS |
AGCAACCTAAAGTGTTTCTA+TGG | 0.384927 | 8.1:+10432429 | MS.gene036655:CDS |
ATCACCCTGCTTCCGTGTTA+AGG | 0.389482 | 8.1:+10433939 | MS.gene036655:CDS |
ACATACCATAGAAACACTTT+AGG | 0.392416 | 8.1:-10432434 | None:intergenic |
TCCTTCCTTAACACGGAAGC+AGG | 0.400654 | 8.1:-10433944 | None:intergenic |
TTACTGGCAATGTTTCCATC+CGG | 0.434194 | 8.1:+10433697 | MS.gene036655:CDS |
TACTGGCAATGTTTCCATCC+GGG | 0.437436 | 8.1:+10433698 | MS.gene036655:CDS |
GTCACAGTGCTAAGATGAAT+AGG | 0.443080 | 8.1:+10433742 | MS.gene036655:CDS |
AACCGCTTCTTTAAATCCGT+TGG | 0.460564 | 8.1:+10432595 | MS.gene036655:CDS |
AGGGCACTTCTTGTCAATGT+AGG | 0.469506 | 8.1:-10433673 | None:intergenic |
GACGTTGAACCTCACAGTCT+TGG | 0.472416 | 8.1:-10434134 | None:intergenic |
TGCCTTCTTCCCAGCACCAC+TGG | 0.477160 | 8.1:-10434182 | None:intergenic |
ATCCAGTGGTGCTGGGAAGA+AGG | 0.479938 | 8.1:+10434180 | MS.gene036655:CDS |
ATGTTATTATTGGGCAATGC+AGG | 0.485129 | 8.1:+10433971 | MS.gene036655:CDS |
CTGGTTCATCCAGTGGTGCT+GGG | 0.492604 | 8.1:+10434173 | MS.gene036655:CDS |
GTTAATTACTTGTTCAGCCA+TGG | 0.496408 | 8.1:-10432295 | None:intergenic |
AAAGGAAAGAGGCCTGGAAA+AGG | 0.502986 | 8.1:+10432568 | MS.gene036655:CDS |
AGCTAAAATACGGCCCCGGA+TGG | 0.510722 | 8.1:-10433712 | None:intergenic |
GACAAGTTCCAGCTAAAATA+CGG | 0.511848 | 8.1:-10433722 | None:intergenic |
TGGAAACATTGCCAGTAAAA+GGG | 0.518269 | 8.1:-10433692 | None:intergenic |
ACTCCCAGAGAAGCCATTGA+AGG | 0.523893 | 8.1:+10432631 | MS.gene036655:CDS |
TTGGTAGCTCAAAGAAGAGT+GGG | 0.529884 | 8.1:+10432545 | MS.gene036655:intron |
GCACCACTGGATGAACCAGC+TGG | 0.536114 | 8.1:-10434169 | None:intergenic |
AGTGGGAAAGGAAAGAGGCC+TGG | 0.536739 | 8.1:+10432562 | MS.gene036655:CDS |
CCCTGCTTCCGTGTTAAGGA+AGG | 0.558291 | 8.1:+10433943 | MS.gene036655:CDS |
GAACCTTCAATGGCTTCTCT+GGG | 0.562688 | 8.1:-10432634 | None:intergenic |
GTCTTGAAAGTGATCCCAGC+TGG | 0.565686 | 8.1:+10434154 | MS.gene036655:CDS |
ATCCCAGCTGGTTCATCCAG+TGG | 0.566568 | 8.1:+10434166 | MS.gene036655:CDS |
AGAAGAGTGGGAAAGGAAAG+AGG | 0.567345 | 8.1:+10432557 | MS.gene036655:CDS |
ACTGGCAATGTTTCCATCCG+GGG | 0.570865 | 8.1:+10433699 | MS.gene036655:CDS |
AAGCAGGGTGATACATGAGC+AGG | 0.574164 | 8.1:-10433928 | None:intergenic |
GGAAAGAGGCCTGGAAAAGG+TGG | 0.575072 | 8.1:+10432571 | MS.gene036655:CDS |
TTGTGTGTTACAGACTGAGA+AGG | 0.577565 | 8.1:+10432397 | MS.gene036655:intron |
TTCCAGCTAAAATACGGCCC+CGG | 0.583185 | 8.1:-10433716 | None:intergenic |
ATAGGACTATTATTGTTAGG+AGG | 0.587464 | 8.1:+10433760 | MS.gene036655:CDS |
AGCTCAAAGAAGAGTGGGAA+AGG | 0.587623 | 8.1:+10432550 | MS.gene036655:intron |
GACCAACGGATTTAAAGAAG+CGG | 0.587920 | 8.1:-10432597 | None:intergenic |
TTTGGTAGCTCAAAGAAGAG+TGG | 0.594148 | 8.1:+10432544 | MS.gene036655:intron |
CTCTATTTAGATATGAGAAG+AGG | 0.599289 | 8.1:+10433893 | MS.gene036655:intron |
AACCTCACAGTCTTGGAGAG+AGG | 0.610094 | 8.1:-10434127 | None:intergenic |
CATGATCTCCTTCCTTAACA+CGG | 0.626861 | 8.1:-10433951 | None:intergenic |
CACCACTGGATGAACCAGCT+GGG | 0.630037 | 8.1:-10434168 | None:intergenic |
CCTTCCTTAACACGGAAGCA+GGG | 0.633141 | 8.1:-10433943 | None:intergenic |
ACTTTATCAAGAAGTATCAG+AGG | 0.634593 | 8.1:+10433793 | MS.gene036655:CDS |
GGCCTCTCTCCAAGACTGTG+AGG | 0.650917 | 8.1:+10434125 | MS.gene036655:intron |
AGTCTTAAATCCAAGACCAA+CGG | 0.666807 | 8.1:-10432611 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTATTTTAAAAAT+AGG | + | chr8.1:10433648-10433667 | MS.gene036655:intron | 0.0% |
!!! | AATTTATTGTGATATTTTAT+TGG | + | chr8.1:10432678-10432697 | MS.gene036655:intron | 10.0% |
!!! | AAAAAAAGGATAAATCATTT+TGG | - | chr8.1:10432474-10432493 | None:intergenic | 15.0% |
!!! | AAAAAAGGATAAATCATTTT+GGG | - | chr8.1:10432473-10432492 | None:intergenic | 15.0% |
!! | ACATCATATATTAAAGACTA+TGG | - | chr8.1:10433051-10433070 | None:intergenic | 20.0% |
!!! | AATACAAAATGGATTTCAAA+AGG | - | chr8.1:10433348-10433367 | None:intergenic | 20.0% |
!!! | ATAATTTAAGACACAGAAAA+AGG | - | chr8.1:10434016-10434035 | None:intergenic | 20.0% |
!!! | GTTTGTTATTTGATTGAATT+TGG | + | chr8.1:10432526-10432545 | MS.gene036655:intron | 20.0% |
!!! | TGTGCAATAAATGTTTTAAT+TGG | + | chr8.1:10432870-10432889 | MS.gene036655:intron | 20.0% |
! | AAAGAAACAACAAAGTCATT+TGG | - | chr8.1:10433582-10433601 | None:intergenic | 25.0% |
! | AAAGAAACAACAATGTCATT+TGG | - | chr8.1:10433522-10433541 | None:intergenic | 25.0% |
! | AAGGAGATCATGTTATTATT+GGG | + | chr8.1:10433962-10433981 | MS.gene036655:CDS | 25.0% |
! | ACATCAATGCATTTACATTT+CGG | - | chr8.1:10433239-10433258 | None:intergenic | 25.0% |
! | TGAATAGGACTATTATTGTT+AGG | + | chr8.1:10433757-10433776 | MS.gene036655:CDS | 25.0% |
!! | TCACAAATAGTCAATTTTGT+AGG | + | chr8.1:10432737-10432756 | MS.gene036655:intron | 25.0% |
!! | TTGTGATATTTTATTGGATC+TGG | + | chr8.1:10432684-10432703 | MS.gene036655:intron | 25.0% |
!!! | TGATGTTTTAATGTATGATG+TGG | + | chr8.1:10433065-10433084 | MS.gene036655:intron | 25.0% |
ACAATAAATTCACAATGCAG+AGG | - | chr8.1:10432668-10432687 | None:intergenic | 30.0% | |
ACATACCATAGAAACACTTT+AGG | - | chr8.1:10432437-10432456 | None:intergenic | 30.0% | |
ATAGGACTATTATTGTTAGG+AGG | + | chr8.1:10433760-10433779 | MS.gene036655:CDS | 30.0% | |
CAAATAAAAACAGGACATCA+AGG | - | chr8.1:10433825-10433844 | None:intergenic | 30.0% | |
CAACAAATCGAAGGAAAAAA+AGG | - | chr8.1:10432488-10432507 | None:intergenic | 30.0% | |
CAGAAATAAACATGCACATT+CGG | - | chr8.1:10433545-10433564 | None:intergenic | 30.0% | |
CAGGAAGATTAATCTTTGAT+AGG | - | chr8.1:10433004-10433023 | None:intergenic | 30.0% | |
CATGTGGCTGAATTTATTAT+TGG | + | chr8.1:10433090-10433109 | MS.gene036655:intron | 30.0% | |
CATTGGACTCTAATACAAAA+TGG | - | chr8.1:10433359-10433378 | None:intergenic | 30.0% | |
CTCTATTTAGATATGAGAAG+AGG | + | chr8.1:10433893-10433912 | MS.gene036655:intron | 30.0% | |
GAAGATTAATCTTTGATAGG+TGG | - | chr8.1:10433001-10433020 | None:intergenic | 30.0% | |
GAAGGAGATCATGTTATTAT+TGG | + | chr8.1:10433961-10433980 | MS.gene036655:CDS | 30.0% | |
GAATTTCAACAAAATCACAG+TGG | - | chr8.1:10432923-10432942 | None:intergenic | 30.0% | |
GATATAGATGTATGTCTGAT+TGG | + | chr8.1:10434080-10434099 | MS.gene036655:intron | 30.0% | |
TAAGAACAACCGAAACAAAA+GGG | - | chr8.1:10432336-10432355 | None:intergenic | 30.0% | |
TCAAAATCACAACAAATCGA+AGG | - | chr8.1:10432497-10432516 | None:intergenic | 30.0% | |
TTCTGTCATGCAATCATTAT+TGG | + | chr8.1:10433258-10433277 | MS.gene036655:intron | 30.0% | |
! | ACAACAATGTCATTTGGATT+TGG | - | chr8.1:10433516-10433535 | None:intergenic | 30.0% |
! | CATTTTGTATTAGAGTCCAA+TGG | + | chr8.1:10433357-10433376 | MS.gene036655:intron | 30.0% |
!! | AAAGTATAGCCTTTGAGTTT+TGG | + | chr8.1:10432943-10432962 | MS.gene036655:intron | 30.0% |
!! | ACTTTATCAAGAAGTATCAG+AGG | + | chr8.1:10433793-10433812 | MS.gene036655:CDS | 30.0% |
!! | AGCATATTATTTTGCTAGCT+AGG | - | chr8.1:10433312-10433331 | None:intergenic | 30.0% |
!! | TTCCTTTTTCCCTTTTGTTT+CGG | + | chr8.1:10432324-10432343 | MS.gene036655:intron | 30.0% |
!! | TTTATTTGTGCCATTTCATC+AGG | + | chr8.1:10434104-10434123 | MS.gene036655:intron | 30.0% |
AAACACATGATACAAATCCC+TGG | - | chr8.1:10433154-10433173 | None:intergenic | 35.0% | |
AACCGAAACAAAAGGGAAAA+AGG | - | chr8.1:10432329-10432348 | None:intergenic | 35.0% | |
AATGTATGATGTGGATCATG+TGG | + | chr8.1:10433074-10433093 | MS.gene036655:intron | 35.0% | |
AGTCTTAAATCCAAGACCAA+CGG | - | chr8.1:10432614-10432633 | None:intergenic | 35.0% | |
ATGGAAACATTGCCAGTAAA+AGG | - | chr8.1:10433696-10433715 | None:intergenic | 35.0% | |
ATGTTATTATTGGGCAATGC+AGG | + | chr8.1:10433971-10433990 | MS.gene036655:CDS | 35.0% | |
CTAAGAACAACCGAAACAAA+AGG | - | chr8.1:10432337-10432356 | None:intergenic | 35.0% | |
CTCCAAGTGCAAATAAAAAC+AGG | - | chr8.1:10433834-10433853 | None:intergenic | 35.0% | |
GACAACAAGTGTTATGACTA+GGG | - | chr8.1:10433393-10433412 | None:intergenic | 35.0% | |
GACAAGTTCCAGCTAAAATA+CGG | - | chr8.1:10433725-10433744 | None:intergenic | 35.0% | |
GGTAAAAAAGGAACCTTCAA+TGG | - | chr8.1:10432647-10432666 | None:intergenic | 35.0% | |
TCACAATGCAGAGGTAAAAA+AGG | - | chr8.1:10432659-10432678 | None:intergenic | 35.0% | |
TGACAACAAGTGTTATGACT+AGG | - | chr8.1:10433394-10433413 | None:intergenic | 35.0% | |
TGGAAACATTGCCAGTAAAA+GGG | - | chr8.1:10433695-10433714 | None:intergenic | 35.0% | |
! | AGCAACCTAAAGTGTTTCTA+TGG | + | chr8.1:10432429-10432448 | MS.gene036655:CDS | 35.0% |
! | CCAATCCAACTTGAAAGTAT+AGG | + | chr8.1:10433202-10433221 | MS.gene036655:intron | 35.0% |
! | GTAGACCTATACTTTCAAGT+TGG | - | chr8.1:10433210-10433229 | None:intergenic | 35.0% |
! | TTCTTTAAATCCGTTGGTCT+TGG | + | chr8.1:10432601-10432620 | MS.gene036655:CDS | 35.0% |
!! | CCTATACTTTCAAGTTGGAT+TGG | - | chr8.1:10433205-10433224 | None:intergenic | 35.0% |
!!! | AAGCTTTTGATTTCGAAACC+AGG | + | chr8.1:10433133-10433152 | MS.gene036655:intron | 35.0% |
!!! | AGCTTTTGATTTCGAAACCA+GGG | + | chr8.1:10433134-10433153 | MS.gene036655:intron | 35.0% |
!!! | GTCCTGTTTTTATTTGCACT+TGG | + | chr8.1:10433829-10433848 | MS.gene036655:intron | 35.0% |
AACCGCTTCTTTAAATCCGT+TGG | + | chr8.1:10432595-10432614 | MS.gene036655:CDS | 40.0% | |
CATGATCTCCTTCCTTAACA+CGG | - | chr8.1:10433954-10433973 | None:intergenic | 40.0% | |
CTAGGGATATCGAAAACCAT+TGG | - | chr8.1:10433376-10433395 | None:intergenic | 40.0% | |
GCCATTATGCCAAAACTCAA+AGG | - | chr8.1:10432955-10432974 | None:intergenic | 40.0% | |
GTCACAGTGCTAAGATGAAT+AGG | + | chr8.1:10433742-10433761 | MS.gene036655:CDS | 40.0% | |
TGTGTGTGTGTGTGTGTAAA+CGG | + | chr8.1:10434051-10434070 | MS.gene036655:intron | 40.0% | |
TGTTGTCATTGATCGTGTCA+TGG | + | chr8.1:10433406-10433425 | MS.gene036655:intron | 40.0% | |
TTACTGGCAATGTTTCCATC+CGG | + | chr8.1:10433697-10433716 | MS.gene036655:CDS | 40.0% | |
TTGTGTGTTACAGACTGAGA+AGG | + | chr8.1:10432397-10432416 | MS.gene036655:intron | 40.0% | |
! | GACCAACGGATTTAAAGAAG+CGG | - | chr8.1:10432600-10432619 | None:intergenic | 40.0% |
! | TTGGTAGCTCAAAGAAGAGT+GGG | + | chr8.1:10432545-10432564 | MS.gene036655:intron | 40.0% |
! | TTTGGTAGCTCAAAGAAGAG+TGG | + | chr8.1:10432544-10432563 | MS.gene036655:intron | 40.0% |
!! | GCCTTTGAGTTTTGGCATAA+TGG | + | chr8.1:10432951-10432970 | MS.gene036655:intron | 40.0% |
AAAGGAAAGAGGCCTGGAAA+AGG | + | chr8.1:10432568-10432587 | MS.gene036655:CDS | 45.0% | |
ACACGATCAACGACAACAAG+TGG | - | chr8.1:10433459-10433478 | None:intergenic | 45.0% | |
AGAAGAGTGGGAAAGGAAAG+AGG | + | chr8.1:10432557-10432576 | MS.gene036655:CDS | 45.0% | |
AGCTCAAAGAAGAGTGGGAA+AGG | + | chr8.1:10432550-10432569 | MS.gene036655:intron | 45.0% | |
CAATCGCAGGTTCATCATTC+AGG | - | chr8.1:10433023-10433042 | None:intergenic | 45.0% | |
CAATGCAGGTGAGACTCAAT+AGG | + | chr8.1:10433985-10434004 | MS.gene036655:intron | 45.0% | |
GAACCTTCAATGGCTTCTCT+GGG | - | chr8.1:10432637-10432656 | None:intergenic | 45.0% | |
GACTATGGATCTTCAATCGC+AGG | - | chr8.1:10433036-10433055 | None:intergenic | 45.0% | |
GTGTCATGGCATCATCTACT+TGG | + | chr8.1:10433420-10433439 | MS.gene036655:intron | 45.0% | |
TACTGGCAATGTTTCCATCC+GGG | + | chr8.1:10433698-10433717 | MS.gene036655:CDS | 45.0% | |
TGTTGTCGTTGATCGTGTCA+TGG | + | chr8.1:10433461-10433480 | MS.gene036655:intron | 45.0% | |
! | AGGGCACTTCTTGTCAATGT+AGG | - | chr8.1:10433676-10433695 | None:intergenic | 45.0% |
!!! | GACAAGAAGTGCCCTTTTAC+TGG | + | chr8.1:10433681-10433700 | MS.gene036655:CDS | 45.0% |
!! | AAAATAAAAAAAATCATAAA+AGG | - | chr8.1:10433642-10433661 | None:intergenic | 5.0% |
AACCTCACAGTCTTGGAGAG+AGG | - | chr8.1:10434130-10434149 | None:intergenic | 50.0% | |
AAGCAGGGTGATACATGAGC+AGG | - | chr8.1:10433931-10433950 | None:intergenic | 50.0% | |
ACTCCCAGAGAAGCCATTGA+AGG | + | chr8.1:10432631-10432650 | MS.gene036655:CDS | 50.0% | |
ACTGGCAATGTTTCCATCCG+GGG | + | chr8.1:10433699-10433718 | MS.gene036655:CDS | 50.0% | |
ATCACCCTGCTTCCGTGTTA+AGG | + | chr8.1:10433939-10433958 | MS.gene036655:CDS | 50.0% | |
CCTTCCTTAACACGGAAGCA+GGG | - | chr8.1:10433946-10433965 | None:intergenic | 50.0% | |
GACGTTGAACCTCACAGTCT+TGG | - | chr8.1:10434137-10434156 | None:intergenic | 50.0% | |
GGAACCTTCAATGGCTTCTC+TGG | - | chr8.1:10432638-10432657 | None:intergenic | 50.0% | |
GTCTTGAAAGTGATCCCAGC+TGG | + | chr8.1:10434154-10434173 | MS.gene036655:CDS | 50.0% | |
TCCTTCCTTAACACGGAAGC+AGG | - | chr8.1:10433947-10433966 | None:intergenic | 50.0% | |
TGCAGGTGAGACTCAATAGG+AGG | + | chr8.1:10433988-10434007 | MS.gene036655:intron | 50.0% | |
TGGAGAGAGGCCTGATGAAA+TGG | - | chr8.1:10434117-10434136 | None:intergenic | 50.0% | |
TTCCAGCTAAAATACGGCCC+CGG | - | chr8.1:10433719-10433738 | None:intergenic | 50.0% | |
! | AAGCGGTTTCCACCTTTTCC+AGG | - | chr8.1:10432583-10432602 | None:intergenic | 50.0% |
!! | GCTGGGAAGAAGGCATTTAC+TGG | + | chr8.1:10434190-10434209 | MS.gene036655:CDS | 50.0% |
AGCTAAAATACGGCCCCGGA+TGG | - | chr8.1:10433715-10433734 | None:intergenic | 55.0% | |
AGTGGGAAAGGAAAGAGGCC+TGG | + | chr8.1:10432562-10432581 | MS.gene036655:CDS | 55.0% | |
CACCACTGGATGAACCAGCT+GGG | - | chr8.1:10434171-10434190 | None:intergenic | 55.0% | |
CCCTGCTTCCGTGTTAAGGA+AGG | + | chr8.1:10433943-10433962 | MS.gene036655:CDS | 55.0% | |
CTGGTTCATCCAGTGGTGCT+GGG | + | chr8.1:10434173-10434192 | MS.gene036655:CDS | 55.0% | |
GGAAAGAGGCCTGGAAAAGG+TGG | + | chr8.1:10432571-10432590 | MS.gene036655:CDS | 55.0% | |
! | ATCCAGTGGTGCTGGGAAGA+AGG | + | chr8.1:10434180-10434199 | MS.gene036655:CDS | 55.0% |
! | ATCCCAGCTGGTTCATCCAG+TGG | + | chr8.1:10434166-10434185 | MS.gene036655:CDS | 55.0% |
!!! | ATCCGGGGCCGTATTTTAGC+TGG | + | chr8.1:10433714-10433733 | MS.gene036655:CDS | 55.0% |
GCACCACTGGATGAACCAGC+TGG | - | chr8.1:10434172-10434191 | None:intergenic | 60.0% | |
GGCCTCTCTCCAAGACTGTG+AGG | + | chr8.1:10434125-10434144 | MS.gene036655:intron | 60.0% | |
TGCCTTCTTCCCAGCACCAC+TGG | - | chr8.1:10434185-10434204 | None:intergenic | 60.0% | |
! | GCTGGTTCATCCAGTGGTGC+TGG | + | chr8.1:10434172-10434191 | MS.gene036655:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 10432297 | 10434219 | 10432297 | ID=MS.gene036655 |
chr8.1 | mRNA | 10432297 | 10434219 | 10432297 | ID=MS.gene036655.t1;Parent=MS.gene036655 |
chr8.1 | exon | 10432297 | 10432308 | 10432297 | ID=MS.gene036655.t1.exon1;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10432297 | 10432308 | 10432297 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
chr8.1 | exon | 10432410 | 10432450 | 10432410 | ID=MS.gene036655.t1.exon2;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10432410 | 10432450 | 10432410 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
chr8.1 | exon | 10432552 | 10432652 | 10432552 | ID=MS.gene036655.t1.exon3;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10432552 | 10432652 | 10432552 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
chr8.1 | exon | 10433670 | 10433814 | 10433670 | ID=MS.gene036655.t1.exon4;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10433670 | 10433814 | 10433670 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
chr8.1 | exon | 10433903 | 10433992 | 10433903 | ID=MS.gene036655.t1.exon5;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10433903 | 10433992 | 10433903 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
chr8.1 | exon | 10434126 | 10434219 | 10434126 | ID=MS.gene036655.t1.exon6;Parent=MS.gene036655.t1 |
chr8.1 | CDS | 10434126 | 10434219 | 10434126 | ID=cds.MS.gene036655.t1;Parent=MS.gene036655.t1 |
Gene Sequence |
Protein sequence |