AlfalfaGEDB | MS.gene89608

M. sativa cultivar XinJiangDaYe / MS.gene89608

KEGG: K02949
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00366.23 PF16205.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89608.t1	XP_003629390.1	100	160	0	0	1	160	1	160	5.70E-87	330.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89608.t1	P17093	95.0	160	7	1	1	160	1	159	8.6e-84	310.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89608.t1	B7FGL2	100.0	160	0	0	1	160	1	160	4.1e-87	330.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050252	MS.gene89608	0.878208	3.38E-69	-1.69E-46
MS.gene050290	MS.gene89608	0.818769	1.65E-52	-1.69E-46
MS.gene051904	MS.gene89608	0.834548	2.81E-56	-1.69E-46
MS.gene057052	MS.gene89608	0.849641	2.84E-60	-1.69E-46
MS.gene057272	MS.gene89608	0.814719	1.34E-51	-1.69E-46
MS.gene058994	MS.gene89608	0.801166	1.02E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene018744	MS.gene89608	PPI
MS.gene50464	MS.gene89608	PPI
MS.gene50465	MS.gene89608	PPI
MS.gene23525	MS.gene89608	PPI
MS.gene75013	MS.gene89608	PPI
MS.gene35157	MS.gene89608	PPI
MS.gene89608	MS.gene83444	PPI
MS.gene52753	MS.gene89608	PPI
MS.gene89608	MS.gene58215	PPI
MS.gene89608	MS.gene036656	PPI
MS.gene36492	MS.gene89608	PPI
MS.gene029825	MS.gene89608	PPI
MS.gene028300	MS.gene89608	PPI
MS.gene89608	MS.gene012043	PPI
MS.gene041400	MS.gene89608	PPI
MS.gene012045	MS.gene89608	PPI
MS.gene89608	MS.gene012040	PPI
MS.gene89608	MS.gene074594	PPI
MS.gene52750	MS.gene89608	PPI
MS.gene047883	MS.gene89608	PPI
MS.gene047882	MS.gene89608	PPI
MS.gene053381	MS.gene89608	PPI
MS.gene028153	MS.gene89608	PPI
MS.gene76443	MS.gene89608	PPI
MS.gene063568	MS.gene89608	PPI
MS.gene018074	MS.gene89608	PPI
MS.gene58776	MS.gene89608	PPI
MS.gene04837	MS.gene89608	PPI
MS.gene72768	MS.gene89608	PPI
MS.gene82426	MS.gene89608	PPI
MS.gene65479	MS.gene89608	PPI
MS.gene036655	MS.gene89608	PPI
MS.gene063209	MS.gene89608	PPI
MS.gene018749	MS.gene89608	PPI
MS.gene020330	MS.gene89608	PPI
MS.gene23528	MS.gene89608	PPI
MS.gene23520	MS.gene89608	PPI
MS.gene023154	MS.gene89608	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89608.t1	MTR_8g076830	100.000	160	0	0	1	160	1	160	1.21e-117	329
MS.gene89608.t1	MTR_4g116410	97.500	160	4	0	1	160	1	160	6.73e-115	322
MS.gene89608.t1	MTR_1g017780	93.168	161	10	1	1	160	1	161	2.44e-99	283

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89608.t1	AT3G48930	91.250	160	14	0	1	160	1	160	6.64e-98	279
MS.gene89608.t1	AT5G23740	90.000	160	15	1	1	160	1	159	4.99e-96	274
MS.gene89608.t1	AT4G30800	90.625	160	14	1	1	160	1	159	4.19e-94	270

Find 55 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAAAGGTGGAAATCGTTTC+TGG	0.234016	8.3:+27297382	MS.gene89608:CDS
ATTACCTTCAGTGGCTTCTC+TGG	0.248135	8.3:-27297433	None:intergenic
GAAGGAGACCATGTTATTAT+TGG	0.252368	8.3:+27298544	MS.gene89608:CDS
AGCAACCCAAAGTGTTTCTA+TGG	0.356385	8.3:+27297231	MS.gene89608:CDS
TTCTGGAAATCAGTTGGTCT+TGG	0.364644	8.3:+27297399	MS.gene89608:CDS
CTTAGCACTGTGGCAAGTTC+CGG	0.365733	8.3:-27298309	None:intergenic
ATCACCTTGCTTCCGTGTTA+AGG	0.374753	8.3:+27298522	MS.gene89608:CDS
TTACCTTCAGTGGCTTCTCT+GGG	0.406115	8.3:-27297432	None:intergenic
TGTTGCAGTTCGAAGAAATC+TGG	0.406931	8.3:+27297342	MS.gene89608:intron
TACATACCATAGAAACACTT+TGG	0.429678	8.3:-27297237	None:intergenic
ACCCCGGATGGAAACATTGC+CGG	0.435918	8.3:-27298276	None:intergenic
ATGGAAACATTGCCGGTGAA+TGG	0.446336	8.3:-27298269	None:intergenic
TCACCGGCAATGTTTCCATC+CGG	0.450663	8.3:+27298273	MS.gene89608:CDS
GCCACAGTGCTAAGATGAAT+AGG	0.451415	8.3:+27298318	MS.gene89608:CDS
CACCGGCAATGTTTCCATCC+GGG	0.463421	8.3:+27298274	MS.gene89608:CDS
CACGTTGAACCTCACAGTCT+TGG	0.472737	8.3:-27298705	None:intergenic
TGGACACTTCTTGTCAATGT+AGG	0.485606	8.3:-27298249	None:intergenic
ACATACCATAGAAACACTTT+GGG	0.486474	8.3:-27297236	None:intergenic
CAGTTCGAAGAAATCTGGTA+AGG	0.491165	8.3:+27297347	MS.gene89608:intron
GGCTAAGATACGACCCCGGA+TGG	0.500286	8.3:-27298288	None:intergenic
GCTGGATCATCTAGTGGTGC+AGG	0.501738	8.3:+27298743	MS.gene89608:CDS
TGAATAGGACTATTATTGTC+AGG	0.502457	8.3:+27298333	MS.gene89608:CDS
ATCTAGTGGTGCAGGAAAGA+AGG	0.504250	8.3:+27298751	MS.gene89608:CDS
TCTGGTAAGGGGAAGAGGCC+AGG	0.508129	8.3:+27297360	MS.gene89608:CDS
AGAAATCTGGTAAGGGGAAG+AGG	0.511084	8.3:+27297355	MS.gene89608:CDS
AAGGGGAAGAGGCCAGGAAA+AGG	0.518491	8.3:+27297366	MS.gene89608:CDS
ACCTTCAGTGGCTTCTCTGG+GGG	0.522306	8.3:-27297430	None:intergenic
ATGTTATTATTGGACAATGC+AGG	0.531107	8.3:+27298554	MS.gene89608:CDS
ACCGGCAATGTTTCCATCCG+GGG	0.533333	8.3:+27298275	MS.gene89608:CDS
GACAAGAAGTGTCCATTCAC+CGG	0.534170	8.3:+27298257	MS.gene89608:CDS
GCACCACTAGATGATCCAGC+TGG	0.537223	8.3:-27298740	None:intergenic
GTGATTGACATTACCTTCAG+TGG	0.547077	8.3:-27297442	None:intergenic
CCTTGCTTCCGTGTTAAGGA+AGG	0.547217	8.3:+27298526	MS.gene89608:CDS
ATCCGGGGTCGTATCTTAGC+CGG	0.548552	8.3:+27298290	MS.gene89608:CDS
TACCTTCAGTGGCTTCTCTG+GGG	0.550510	8.3:-27297431	None:intergenic
CTTTGTGTTACAGACTGAGA+AGG	0.555671	8.3:+27297199	MS.gene89608:intron
GGGAAGAGGCCAGGAAAAGG+TGG	0.558384	8.3:+27297369	MS.gene89608:CDS
AATCGTTTCTGGAAATCAGT+TGG	0.558681	8.3:+27297393	MS.gene89608:CDS
GTGTTGAAAGTGATCCCAGC+TGG	0.566524	8.3:+27298725	MS.gene89608:CDS
AAGCAAGGTGATACGTGAGC+AGG	0.574164	8.3:-27298511	None:intergenic
GTAAGTTACTTGTTCAGCCA+TGG	0.581521	8.3:-27297112	None:intergenic
AGTTCGAAGAAATCTGGTAA+GGG	0.591421	8.3:+27297348	MS.gene89608:intron
AACCTCACAGTCTTGGAGAG+TGG	0.595732	8.3:-27298698	None:intergenic
CCTTCCTTAACACGGAAGCA+AGG	0.616216	8.3:-27298526	None:intergenic
CTCTGTCTAGGTATGAGAAG+AGG	0.621567	8.3:+27298476	MS.gene89608:intron
ACTTTATTAAGAAGTATCAG+AGG	0.622717	8.3:+27298369	MS.gene89608:CDS
CACCACTAGATGATCCAGCT+GGG	0.624692	8.3:-27298739	None:intergenic
CATGGTCTCCTTCCTTAACA+CGG	0.629567	8.3:-27298534	None:intergenic
GTTCGAAGAAATCTGGTAAG+GGG	0.639946	8.3:+27297349	MS.gene89608:intron
ATCCCAGCTGGATCATCTAG+TGG	0.646748	8.3:+27298737	MS.gene89608:CDS
TGCATTGTCCAATAATAACA+TGG	0.654130	8.3:-27298552	None:intergenic
GGCCACTCTCCAAGACTGTG+AGG	0.675363	8.3:+27298696	MS.gene89608:intron
ATAGGACTATTATTGTCAGG+AGG	0.705889	8.3:+27298336	MS.gene89608:CDS
TCCTATTCATCTTAGCACTG+TGG	0.711732	8.3:-27298319	None:intergenic
TTCCGGCTAAGATACGACCC+CGG	0.732863	8.3:-27298292	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAAATAAAACAGAAAT+TGG	-	chr8.3:27297275-27297294	None:intergenic	10.0%
!!	AATAAAATAAAACAGAAATT+GGG	-	chr8.3:27297274-27297293	None:intergenic	10.0%
!!!	CATTTTTTTTTTTATAAAAC+AGG	+	chr8.3:27298224-27298243	MS.gene89608:intron	10.0%
!!	GAAATTGAAAAATAAATCAA+TGG	-	chr8.3:27297180-27297199	None:intergenic	15.0%
!!	TGTTTGTAAATAAATAATAG+TGG	+	chr8.3:27297825-27297844	MS.gene89608:intron	15.0%
!!!	AAAAGACTACATTTTTTTTT+AGG	-	chr8.3:27297663-27297682	None:intergenic	15.0%
!!	TAAGTGTGCAAATAAAAAAT+GGG	-	chr8.3:27298421-27298440	None:intergenic	20.0%
!!	TATTTATTTACAAACACAAC+AGG	-	chr8.3:27297821-27297840	None:intergenic	20.0%
!!	TGTCTGTTTATATGATAAAT+TGG	+	chr8.3:27297791-27297810	MS.gene89608:intron	20.0%
!!!	AGTAACAGTGTTTAATTTTA+GGG	+	chr8.3:27297468-27297487	MS.gene89608:intron	20.0%
!!!	TAGTAACAGTGTTTAATTTT+AGG	+	chr8.3:27297467-27297486	MS.gene89608:intron	20.0%
!!!	TATGTTCTAAACTTACATAT+AGG	+	chr8.3:27297503-27297522	MS.gene89608:intron	20.0%
!	AAACTTACATATAGGAATGT+AGG	+	chr8.3:27297511-27297530	MS.gene89608:intron	25.0%
!	AACTAAAACAAATACACTCA+AGG	-	chr8.3:27297555-27297574	None:intergenic	25.0%
!	AACTTACATATAGGAATGTA+GGG	+	chr8.3:27297512-27297531	MS.gene89608:intron	25.0%
!	AAGTGTGCAAATAAAAAATG+GGG	-	chr8.3:27298420-27298439	None:intergenic	25.0%
!	AATTTCACTTTCAAAGTAAC+TGG	-	chr8.3:27298122-27298141	None:intergenic	25.0%
!	ATTGAATTCCTTTCATACTA+TGG	+	chr8.3:27298393-27298412	MS.gene89608:intron	25.0%
!	CTAAGTGTGCAAATAAAAAA+TGG	-	chr8.3:27298422-27298441	None:intergenic	25.0%
!	GTTATGGTTATGTTATGTTA+CGG	+	chr8.3:27297976-27297995	MS.gene89608:intron	25.0%
!	TTCTATAGAAAGCAAAAGAA+AGG	-	chr8.3:27298599-27298618	None:intergenic	25.0%
!!	AAAATGTAGTCTTTTGATAC+TGG	+	chr8.3:27297668-27297687	MS.gene89608:intron	25.0%
!!	GCAATACTTATTCTAGTTAT+TGG	+	chr8.3:27297869-27297888	MS.gene89608:intron	25.0%
!!	GTATTGAGACATGTAATTTT+TGG	+	chr8.3:27297954-27297973	MS.gene89608:intron	25.0%
!!!	ACTTTATTAAGAAGTATCAG+AGG	+	chr8.3:27298369-27298388	MS.gene89608:CDS	25.0%
!!!	AGACATGTAATTTTTGGTTA+TGG	+	chr8.3:27297960-27297979	MS.gene89608:intron	25.0%
!!!	ATTTTAGTCCTCAAATGTAT+TGG	+	chr8.3:27297579-27297598	MS.gene89608:intron	25.0%
!!!	TTCTGTTTCTAATACAGAAA+TGG	+	chr8.3:27298201-27298220	MS.gene89608:intron	25.0%
	AAAATACAGAGATAGAAGGA+AGG	-	chr8.3:27297149-27297168	None:intergenic	30.0%
	ACACTTGCAAGACATAATAT+AGG	-	chr8.3:27298049-27298068	None:intergenic	30.0%
	ACAGAGGAGTAACAAAAAAA+GGG	-	chr8.3:27298462-27298481	None:intergenic	30.0%
	ACATACCATAGAAACACTTT+GGG	-	chr8.3:27297239-27297258	None:intergenic	30.0%
	ATGTTATTATTGGACAATGC+AGG	+	chr8.3:27298554-27298573	MS.gene89608:CDS	30.0%
	TACATACCATAGAAACACTT+TGG	-	chr8.3:27297240-27297259	None:intergenic	30.0%
	TAGAGTAGTAGCACAAATAA+AGG	-	chr8.3:27298676-27298695	None:intergenic	30.0%
	TATAGACCAATTCTTTCAAG+CGG	-	chr8.3:27298005-27298024	None:intergenic	30.0%
	TCCAAAAATACAGAGATAGA+AGG	-	chr8.3:27297153-27297172	None:intergenic	30.0%
	TCCTCAAATGTATTGGATTT+GGG	+	chr8.3:27297586-27297605	MS.gene89608:intron	30.0%
	TGAATAGGACTATTATTGTC+AGG	+	chr8.3:27298333-27298352	MS.gene89608:CDS	30.0%
	TGCATTGTCCAATAATAACA+TGG	-	chr8.3:27298555-27298574	None:intergenic	30.0%
!	ATTGTTAATAGCTCTGTGTA+TGG	+	chr8.3:27298163-27298182	MS.gene89608:intron	30.0%
!	TCCTTCTATCTCTGTATTTT+TGG	+	chr8.3:27297149-27297168	MS.gene89608:intron	30.0%
!	TTTATTTGTGCTACTACTCT+AGG	+	chr8.3:27298675-27298694	MS.gene89608:intron	30.0%
	AGTTCGAAGAAATCTGGTAA+GGG	+	chr8.3:27297348-27297367	MS.gene89608:intron	35.0%
	ATAGGACTATTATTGTCAGG+AGG	+	chr8.3:27298336-27298355	MS.gene89608:CDS	35.0%
	CCTCAAATGTATTGGATTTG+GGG	+	chr8.3:27297587-27297606	MS.gene89608:intron	35.0%
	GAAGGAGACCATGTTATTAT+TGG	+	chr8.3:27298544-27298563	MS.gene89608:CDS	35.0%
	GACAGAGGAGTAACAAAAAA+AGG	-	chr8.3:27298463-27298482	None:intergenic	35.0%
	GTCCTCAAATGTATTGGATT+TGG	+	chr8.3:27297585-27297604	MS.gene89608:intron	35.0%
!	AATAGCTCTGTGTATGGTTA+CGG	+	chr8.3:27298169-27298188	MS.gene89608:intron	35.0%
!	AATCGTTTCTGGAAATCAGT+TGG	+	chr8.3:27297393-27297412	MS.gene89608:CDS	35.0%
!	TATGTCTTGCAAGTGTTGTT+GGG	+	chr8.3:27298053-27298072	MS.gene89608:intron	35.0%
!	TGTAGGGATAAACAGCATTT+TGG	+	chr8.3:27297528-27297547	MS.gene89608:intron	35.0%
!	TTATGTCTTGCAAGTGTTGT+TGG	+	chr8.3:27298052-27298071	MS.gene89608:intron	35.0%
!	TTTTTGTTACTCCTCTGTCT+AGG	+	chr8.3:27298464-27298483	MS.gene89608:intron	35.0%
	AATGGGGACCATAGTATGAA+AGG	-	chr8.3:27298404-27298423	None:intergenic	40.0%
	AGATTCCTCTTGGCAATATC+AGG	+	chr8.3:27297726-27297745	MS.gene89608:intron	40.0%
	CAATGCAGGTGAGACTTTAT+AGG	+	chr8.3:27298568-27298587	MS.gene89608:intron	40.0%
	CAGTTCGAAGAAATCTGGTA+AGG	+	chr8.3:27297347-27297366	MS.gene89608:intron	40.0%
	CCCCAAATCCAATACATTTG+AGG	-	chr8.3:27297590-27297609	None:intergenic	40.0%
	CTTTGTGTTACAGACTGAGA+AGG	+	chr8.3:27297199-27297218	MS.gene89608:intron	40.0%
	GAAAAGGTGGAAATCGTTTC+TGG	+	chr8.3:27297382-27297401	MS.gene89608:CDS	40.0%
	GTGATTGACATTACCTTCAG+TGG	-	chr8.3:27297445-27297464	None:intergenic	40.0%
	GTTCGAAGAAATCTGGTAAG+GGG	+	chr8.3:27297349-27297368	MS.gene89608:intron	40.0%
	TAATAGAGCCTCACATTCGA+GGG	+	chr8.3:27297621-27297640	MS.gene89608:intron	40.0%
	TCCTATTCATCTTAGCACTG+TGG	-	chr8.3:27298322-27298341	None:intergenic	40.0%
	TGGACACTTCTTGTCAATGT+AGG	-	chr8.3:27298252-27298271	None:intergenic	40.0%
	TGTTGCAGTTCGAAGAAATC+TGG	+	chr8.3:27297342-27297361	MS.gene89608:intron	40.0%
!	AAACGATTTCCACCTTTTCC+TGG	-	chr8.3:27297381-27297400	None:intergenic	40.0%
!	AGCAACCCAAAGTGTTTCTA+TGG	+	chr8.3:27297231-27297250	MS.gene89608:CDS	40.0%
!	TGTTTGTCTGAGATTCCTCT+TGG	+	chr8.3:27297716-27297735	MS.gene89608:intron	40.0%
!	TTCTGGAAATCAGTTGGTCT+TGG	+	chr8.3:27297399-27297418	MS.gene89608:CDS	40.0%
	AGAAATCTGGTAAGGGGAAG+AGG	+	chr8.3:27297355-27297374	MS.gene89608:CDS	45.0%
	ATCACCTTGCTTCCGTGTTA+AGG	+	chr8.3:27298522-27298541	MS.gene89608:CDS	45.0%
	ATCTAGTGGTGCAGGAAAGA+AGG	+	chr8.3:27298751-27298770	MS.gene89608:CDS	45.0%
	ATGGAAACATTGCCGGTGAA+TGG	-	chr8.3:27298272-27298291	None:intergenic	45.0%
	ATTACCTTCAGTGGCTTCTC+TGG	-	chr8.3:27297436-27297455	None:intergenic	45.0%
	CATGGTCTCCTTCCTTAACA+CGG	-	chr8.3:27298537-27298556	None:intergenic	45.0%
	CGGTATCCGCTTGAAAGAAT+TGG	+	chr8.3:27297996-27298015	MS.gene89608:intron	45.0%
	CTCTGTCTAGGTATGAGAAG+AGG	+	chr8.3:27298476-27298495	MS.gene89608:intron	45.0%
	CTCTTCTCATACCTAGACAG+AGG	-	chr8.3:27298478-27298497	None:intergenic	45.0%
	GCCACAGTGCTAAGATGAAT+AGG	+	chr8.3:27298318-27298337	MS.gene89608:CDS	45.0%
	GTAATAGAGCCTCACATTCG+AGG	+	chr8.3:27297620-27297639	MS.gene89608:intron	45.0%
	TTACCTTCAGTGGCTTCTCT+GGG	-	chr8.3:27297435-27297454	None:intergenic	45.0%
	TTCCTCTTGGCAATATCAGG+TGG	+	chr8.3:27297729-27297748	MS.gene89608:intron	45.0%
!	GCAGGAAAGAAGGCTTTTAC+TGG	+	chr8.3:27298761-27298780	MS.gene89608:CDS	45.0%
!	TCTTGCAAGTGTTGTTGGGA+AGG	+	chr8.3:27298057-27298076	MS.gene89608:intron	45.0%
!!	CTGAGCGTCTAGCTTTGTAT+TGG	+	chr8.3:27297691-27297710	MS.gene89608:intron	45.0%
!!	GACAAGAAGTGTCCATTCAC+CGG	+	chr8.3:27298257-27298276	MS.gene89608:CDS	45.0%
	AACCTCACAGTCTTGGAGAG+TGG	-	chr8.3:27298701-27298720	None:intergenic	50.0%
	AAGCAAGGTGATACGTGAGC+AGG	-	chr8.3:27298514-27298533	None:intergenic	50.0%
	AGCCACCTGATATTGCCAAG+AGG	-	chr8.3:27297734-27297753	None:intergenic	50.0%
	ATCCCAGCTGGATCATCTAG+TGG	+	chr8.3:27298737-27298756	MS.gene89608:CDS	50.0%
	CACCACTAGATGATCCAGCT+GGG	-	chr8.3:27298742-27298761	None:intergenic	50.0%
	CACGTTGAACCTCACAGTCT+TGG	-	chr8.3:27298708-27298727	None:intergenic	50.0%
	CCTTCCTTAACACGGAAGCA+AGG	-	chr8.3:27298529-27298548	None:intergenic	50.0%
	CCTTGCTTCCGTGTTAAGGA+AGG	+	chr8.3:27298526-27298545	MS.gene89608:CDS	50.0%
	CTTAGCACTGTGGCAAGTTC+CGG	-	chr8.3:27298312-27298331	None:intergenic	50.0%
	GTGTTGAAAGTGATCCCAGC+TGG	+	chr8.3:27298725-27298744	MS.gene89608:CDS	50.0%
	GTTATGCTCCCTCGAATGTG+AGG	-	chr8.3:27297632-27297651	None:intergenic	50.0%
	TACCTTCAGTGGCTTCTCTG+GGG	-	chr8.3:27297434-27297453	None:intergenic	50.0%
	TCACCGGCAATGTTTCCATC+CGG	+	chr8.3:27298273-27298292	MS.gene89608:CDS	50.0%
	AAGGGGAAGAGGCCAGGAAA+AGG	+	chr8.3:27297366-27297385	MS.gene89608:CDS	55.0%
	ACCCCGGATGGAAACATTGC+CGG	-	chr8.3:27298279-27298298	None:intergenic	55.0%
	ACCGGCAATGTTTCCATCCG+GGG	+	chr8.3:27298275-27298294	MS.gene89608:CDS	55.0%
	ACCTTCAGTGGCTTCTCTGG+GGG	-	chr8.3:27297433-27297452	None:intergenic	55.0%
	ATCCGGGGTCGTATCTTAGC+CGG	+	chr8.3:27298290-27298309	MS.gene89608:CDS	55.0%
	CACCGGCAATGTTTCCATCC+GGG	+	chr8.3:27298274-27298293	MS.gene89608:CDS	55.0%
	GCACCACTAGATGATCCAGC+TGG	-	chr8.3:27298743-27298762	None:intergenic	55.0%
	GCTGGATCATCTAGTGGTGC+AGG	+	chr8.3:27298743-27298762	MS.gene89608:CDS	55.0%
	TTCCGGCTAAGATACGACCC+CGG	-	chr8.3:27298295-27298314	None:intergenic	55.0%
	ACCCCCAGAGAAGCCACTGA+AGG	+	chr8.3:27297429-27297448	MS.gene89608:CDS	60.0%
	GGCCACTCTCCAAGACTGTG+AGG	+	chr8.3:27298696-27298715	MS.gene89608:intron	60.0%
	GGCTAAGATACGACCCCGGA+TGG	-	chr8.3:27298291-27298310	None:intergenic	60.0%
	GGGAAGAGGCCAGGAAAAGG+TGG	+	chr8.3:27297369-27297388	MS.gene89608:CDS	60.0%
	TCTGGTAAGGGGAAGAGGCC+AGG	+	chr8.3:27297360-27297379	MS.gene89608:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	27297114	27298790	27297114	ID=MS.gene89608
chr8.3	mRNA	27297114	27298790	27297114	ID=MS.gene89608.t1;Parent=MS.gene89608
chr8.3	exon	27297114	27297125	27297114	ID=MS.gene89608.t1.exon1;Parent=MS.gene89608.t1
chr8.3	CDS	27297114	27297125	27297114	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1
chr8.3	exon	27297212	27297252	27297212	ID=MS.gene89608.t1.exon2;Parent=MS.gene89608.t1
chr8.3	CDS	27297212	27297252	27297212	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1
chr8.3	exon	27297350	27297450	27297350	ID=MS.gene89608.t1.exon3;Parent=MS.gene89608.t1
chr8.3	CDS	27297350	27297450	27297350	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1
chr8.3	exon	27298246	27298390	27298246	ID=MS.gene89608.t1.exon4;Parent=MS.gene89608.t1
chr8.3	CDS	27298246	27298390	27298246	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1
chr8.3	exon	27298486	27298575	27298486	ID=MS.gene89608.t1.exon5;Parent=MS.gene89608.t1
chr8.3	CDS	27298486	27298575	27298486	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1
chr8.3	exon	27298697	27298790	27298697	ID=MS.gene89608.t1.exon6;Parent=MS.gene89608.t1
chr8.3	CDS	27298697	27298790	27298697	ID=cds.MS.gene89608.t1;Parent=MS.gene89608.t1

Gene Sequence

>MS.gene89608

ATGGCTGAACAAGTAACTTACTTCTTCACTCTCCTTCCTTCTATCTCTGTATTTTTGGATCTTCCATTGATTTATTTTTCAATTTCTTTGTGTTACAGACTGAGAAGGCTTTTCTCAAGCAACCCAAAGTGTTTCTATGGTATGTATATTCAATGCTCCCAATTTCTGTTTTATTTTATTTTATTGTGATTTTGATGAATGATTGTTGATGCATATTTTGTTCAATGTTGTTGCAGTTCGAAGAAATCTGGTAAGGGGAAGAGGCCAGGAAAAGGTGGAAATCGTTTCTGGAAATCAGTTGGTCTTGGATTCAAGACCCCCAGAGAAGCCACTGAAGGTAATGTCAATCACAATAGTAACAGTGTTTAATTTTAGGGTGTTTTGCAAATTATGTTCTAAACTTACATATAGGAATGTAGGGATAAACAGCATTTTGGTCCTTGAGTGTATTTGTTTTAGTTAGTCATTTTAGTCCTCAAATGTATTGGATTTGGGGATATGCGTTTGTAATAGAGCCTCACATTCGAGGGAGCATAACAGTTGTTACCTAAAAAAAAATGTAGTCTTTTGATACTGGCTGAGCGTCTAGCTTTGTATTGGTGTGTTTGTCTGAGATTCCTCTTGGCAATATCAGGTGGCTATGATGTGTTTAAATTCACAATACTTATTCTACTTAGTGTCTGTTTATATGATAAATTGGAGTGCCTGTTGTGTTTGTAAATAAATAATAGTGGTTATGATGTGTTTAGAGATTCGCAATACTTATTCTAGTTATTGGCTGTCATATGATTAATTGAAGTGTCTATTGTGTTCATAGATAAGCTTTTCTAATTCGTATCAGTATTGAGACATGTAATTTTTGGTTATGGTTATGTTATGTTACGGTATCCGCTTGAAAGAATTGGTCTATATAATGTACAAATGTAAATGCTCCTATATTATGTCTTGCAAGTGTTGTTGGGAAGGAAATACTTGTAAATTGCAAACAGTATAATGTTCTCGAGTCCAGTTACTTTGAAAGTGAAATTTTTATCAGCTAGAAGTAGAGCATTGTTAATAGCTCTGTGTATGGTTACGGTTATTTTATTTCTGTTTCTAATACAGAAATGGCATTTTTTTTTTTATAAAACAGGAACCTACATTGACAAGAAGTGTCCATTCACCGGCAATGTTTCCATCCGGGGTCGTATCTTAGCCGGAACTTGCCACAGTGCTAAGATGAATAGGACTATTATTGTCAGGAGGAATTATCTTCACTTTATTAAGAAGTATCAGAGGTATTGAATTCCTTTCATACTATGGTCCCCATTTTTTATTTGCACACTTAGAAACATAATTTTTAATTCCCTTTTTTTGTTACTCCTCTGTCTAGGTATGAGAAGAGGCATTCAAACATTCCTGCTCACGTATCACCTTGCTTCCGTGTTAAGGAAGGAGACCATGTTATTATTGGACAATGCAGGTGAGACTTTATAGGAGTATCCTTTCTTTTGCTTTCTATAGAAGATACTGTTATTTTAGTATATTATAGATATTGATATCTATGTCTGTCTAAATTGCCTTTATTTGTGCTACTACTCTAGGCCACTCTCCAAGACTGTGAGGTTCAACGTGTTGAAAGTGATCCCAGCTGGATCATCTAGTGGTGCAGGAAAGAAGGCTTTTACTGGAATGTGA

Protein sequence

>MS.gene89608.t1

MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPREATEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM