Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036656.t1 | XP_003609505.1 | 98.7 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 1.30E-83 | 318.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036656.t1 | P17093 | 94.8 | 154 | 8 | 0 | 1 | 154 | 1 | 154 | 5.3e-81 | 301.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036656.t1 | B7FMB4 | 98.7 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 9.6e-84 | 318.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036656.t1 | MTR_4g116410 | 98.089 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 8.65e-113 | 317 |
MS.gene036656.t1 | MTR_8g076830 | 98.089 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 2.32e-112 | 316 |
MS.gene036656.t1 | MTR_1g017780 | 94.194 | 155 | 9 | 0 | 1 | 155 | 1 | 155 | 2.46e-97 | 278 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036656.t1 | AT3G48930 | 90.446 | 157 | 15 | 0 | 1 | 157 | 1 | 157 | 7.54e-94 | 269 |
MS.gene036656.t1 | AT5G23740 | 89.809 | 157 | 15 | 1 | 1 | 157 | 1 | 156 | 9.91e-93 | 266 |
MS.gene036656.t1 | AT4G30800 | 89.809 | 157 | 15 | 1 | 1 | 157 | 1 | 156 | 3.46e-90 | 259 |
Find 53 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGGAGATCATGTTATTAT+TGG | 0.232109 | 8.4:-13754379 | MS.gene036656:CDS |
ATGGAAACATTGCCAGTAAA+AGG | 0.250015 | 8.4:+13754647 | None:intergenic |
GGAACCTTCAATGGCTTCTC+TGG | 0.256456 | 8.4:+13755705 | None:intergenic |
TGCTGGGAAGAAGGCATTAC+TGG | 0.321474 | 8.4:-13754151 | MS.gene036656:CDS |
TTCTTTAAATCCGTTGGTCT+TGG | 0.342978 | 8.4:-13755739 | MS.gene036656:CDS |
AAGGAGATCATGTTATTATT+GGG | 0.351302 | 8.4:-13754378 | MS.gene036656:CDS |
GCTGGTTCATCCAGTGGTGC+TGG | 0.354296 | 8.4:-13754168 | MS.gene036656:CDS |
TGAATAGGACTATTATTGTT+AGG | 0.366373 | 8.4:-13754583 | MS.gene036656:CDS |
AGCAACCTAAAGTGTTTCTA+TGG | 0.384927 | 8.4:-13755911 | MS.gene036656:intron |
ATCACCCTGCTTCCGTGTTA+AGG | 0.389482 | 8.4:-13754401 | MS.gene036656:CDS |
ACATACCATAGAAACACTTT+AGG | 0.392416 | 8.4:+13755906 | None:intergenic |
TCCTTCCTTAACACGGAAGC+AGG | 0.400654 | 8.4:+13754396 | None:intergenic |
TTACTGGCAATGTTTCCATC+CGG | 0.434194 | 8.4:-13754643 | MS.gene036656:CDS |
TACTGGCAATGTTTCCATCC+GGG | 0.437436 | 8.4:-13754642 | MS.gene036656:CDS |
GTCACAGTGCTAAGATGAAT+AGG | 0.443080 | 8.4:-13754598 | MS.gene036656:CDS |
AACCGCTTCTTTAAATCCGT+TGG | 0.460564 | 8.4:-13755745 | MS.gene036656:CDS |
AGGGCACTTCTTGTCAATGT+AGG | 0.469506 | 8.4:+13754667 | None:intergenic |
TGCCTTCTTCCCAGCACCAC+TGG | 0.470134 | 8.4:+13754158 | None:intergenic |
GACGTTGAACCTCACAGTCT+TGG | 0.472416 | 8.4:+13754206 | None:intergenic |
ATCCAGTGGTGCTGGGAAGA+AGG | 0.479938 | 8.4:-13754160 | MS.gene036656:CDS |
ATGTTATTATTGGGCAATGC+AGG | 0.485129 | 8.4:-13754369 | MS.gene036656:intron |
CTGGTTCATCCAGTGGTGCT+GGG | 0.492604 | 8.4:-13754167 | MS.gene036656:CDS |
GTTAATTACTTGTTCAGCCA+TGG | 0.496408 | 8.4:+13756045 | None:intergenic |
AAAGGAAAGAGGCCTGGAAA+AGG | 0.502986 | 8.4:-13755772 | MS.gene036656:CDS |
AGCTAAAATACGGCCCCGGA+TGG | 0.510722 | 8.4:+13754628 | None:intergenic |
GACAAGTTCCAGCTAAAATA+CGG | 0.511848 | 8.4:+13754618 | None:intergenic |
TGGAAACATTGCCAGTAAAA+GGG | 0.518269 | 8.4:+13754648 | None:intergenic |
ACTCCCAGAGAAGCCATTGA+AGG | 0.523893 | 8.4:-13755709 | MS.gene036656:intron |
TTGGTAGCTCAAAGAAGAGT+GGG | 0.529884 | 8.4:-13755795 | MS.gene036656:intron |
GCACCACTGGATGAACCAGC+TGG | 0.536114 | 8.4:+13754171 | None:intergenic |
AGTGGGAAAGGAAAGAGGCC+TGG | 0.536739 | 8.4:-13755778 | MS.gene036656:CDS |
CCCTGCTTCCGTGTTAAGGA+AGG | 0.558291 | 8.4:-13754397 | MS.gene036656:CDS |
GAACCTTCAATGGCTTCTCT+GGG | 0.562688 | 8.4:+13755706 | None:intergenic |
GTCTTGAAAGTGATCCCAGC+TGG | 0.565686 | 8.4:-13754186 | MS.gene036656:CDS |
ATCCCAGCTGGTTCATCCAG+TGG | 0.566568 | 8.4:-13754174 | MS.gene036656:CDS |
AGAAGAGTGGGAAAGGAAAG+AGG | 0.567345 | 8.4:-13755783 | MS.gene036656:CDS |
ACTGGCAATGTTTCCATCCG+GGG | 0.570865 | 8.4:-13754641 | MS.gene036656:CDS |
AAGCAGGGTGATACATGAGC+AGG | 0.574164 | 8.4:+13754412 | None:intergenic |
GGAAAGAGGCCTGGAAAAGG+TGG | 0.575072 | 8.4:-13755769 | MS.gene036656:CDS |
TTGTGTGTTACAGACTGAGA+AGG | 0.577565 | 8.4:-13755943 | MS.gene036656:intron |
TTCCAGCTAAAATACGGCCC+CGG | 0.583185 | 8.4:+13754624 | None:intergenic |
ATAGGACTATTATTGTTAGG+AGG | 0.587464 | 8.4:-13754580 | MS.gene036656:CDS |
AGCTCAAAGAAGAGTGGGAA+AGG | 0.587623 | 8.4:-13755790 | MS.gene036656:CDS |
GACCAACGGATTTAAAGAAG+CGG | 0.587920 | 8.4:+13755743 | None:intergenic |
TTTGGTAGCTCAAAGAAGAG+TGG | 0.594148 | 8.4:-13755796 | MS.gene036656:intron |
CTCTATTTAGATATGAGAAG+AGG | 0.599289 | 8.4:-13754447 | MS.gene036656:intron |
AACCTCACAGTCTTGGAGAG+AGG | 0.610094 | 8.4:+13754213 | None:intergenic |
CATGATCTCCTTCCTTAACA+CGG | 0.626861 | 8.4:+13754389 | None:intergenic |
CACCACTGGATGAACCAGCT+GGG | 0.630037 | 8.4:+13754172 | None:intergenic |
CCTTCCTTAACACGGAAGCA+GGG | 0.633141 | 8.4:+13754397 | None:intergenic |
ACTTTATCAAGAAGTATCAG+AGG | 0.634593 | 8.4:-13754547 | MS.gene036656:intron |
GGCCTCTCTCCAAGACTGTG+AGG | 0.650917 | 8.4:-13754215 | MS.gene036656:CDS |
AGTCTTAAATCCAAGACCAA+CGG | 0.666807 | 8.4:+13755729 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTATTTTAAAAAT+AGG | - | chr8.4:13755488-13755507 | MS.gene036656:intron | 0.0% |
!!! | AATTTATTGTGATATTTTAT+TGG | - | chr8.4:13754518-13754537 | MS.gene036656:intron | 10.0% |
!!! | AAAAAAAGGATAAATCATTT+TGG | + | chr8.4:13754314-13754333 | None:intergenic | 15.0% |
!!! | AAAAAAGGATAAATCATTTT+GGG | + | chr8.4:13754313-13754332 | None:intergenic | 15.0% |
!! | ACATCATATATTAAAGACTA+TGG | + | chr8.4:13754891-13754910 | None:intergenic | 20.0% |
!!! | AATACAAAATGGATTTCAAA+AGG | + | chr8.4:13755188-13755207 | None:intergenic | 20.0% |
!!! | ATAATTTAAGACACAGAAAA+AGG | + | chr8.4:13755856-13755875 | None:intergenic | 20.0% |
!!! | GTTTGTTATTTGATTGAATT+TGG | - | chr8.4:13754366-13754385 | MS.gene036656:intron | 20.0% |
!!! | TGTGCAATAAATGTTTTAAT+TGG | - | chr8.4:13754710-13754729 | MS.gene036656:intron | 20.0% |
! | AAAGAAACAACAAAGTCATT+TGG | + | chr8.4:13755422-13755441 | None:intergenic | 25.0% |
! | AAAGAAACAACAATGTCATT+TGG | + | chr8.4:13755362-13755381 | None:intergenic | 25.0% |
! | AAGGAGATCATGTTATTATT+GGG | - | chr8.4:13755802-13755821 | MS.gene036656:intron | 25.0% |
! | ACATCAATGCATTTACATTT+CGG | + | chr8.4:13755079-13755098 | None:intergenic | 25.0% |
! | TGAATAGGACTATTATTGTT+AGG | - | chr8.4:13755597-13755616 | MS.gene036656:intron | 25.0% |
!! | TCACAAATAGTCAATTTTGT+AGG | - | chr8.4:13754577-13754596 | MS.gene036656:CDS | 25.0% |
!! | TTGTGATATTTTATTGGATC+TGG | - | chr8.4:13754524-13754543 | MS.gene036656:intron | 25.0% |
!!! | TGATGTTTTAATGTATGATG+TGG | - | chr8.4:13754905-13754924 | MS.gene036656:intron | 25.0% |
ACAATAAATTCACAATGCAG+AGG | + | chr8.4:13754508-13754527 | None:intergenic | 30.0% | |
ACATACCATAGAAACACTTT+AGG | + | chr8.4:13754277-13754296 | None:intergenic | 30.0% | |
ATAGGACTATTATTGTTAGG+AGG | - | chr8.4:13755600-13755619 | MS.gene036656:intron | 30.0% | |
CAAATAAAAACAGGACATCA+AGG | + | chr8.4:13755665-13755684 | None:intergenic | 30.0% | |
CAACAAATCGAAGGAAAAAA+AGG | + | chr8.4:13754328-13754347 | None:intergenic | 30.0% | |
CAGAAATAAACATGCACATT+CGG | + | chr8.4:13755385-13755404 | None:intergenic | 30.0% | |
CAGGAAGATTAATCTTTGAT+AGG | + | chr8.4:13754844-13754863 | None:intergenic | 30.0% | |
CATGTGGCTGAATTTATTAT+TGG | - | chr8.4:13754930-13754949 | MS.gene036656:intron | 30.0% | |
CATTGGACTCTAATACAAAA+TGG | + | chr8.4:13755199-13755218 | None:intergenic | 30.0% | |
CTCTATTTAGATATGAGAAG+AGG | - | chr8.4:13755733-13755752 | MS.gene036656:CDS | 30.0% | |
GAAGATTAATCTTTGATAGG+TGG | + | chr8.4:13754841-13754860 | None:intergenic | 30.0% | |
GAAGGAGATCATGTTATTAT+TGG | - | chr8.4:13755801-13755820 | MS.gene036656:intron | 30.0% | |
GAATTTCAACAAAATCACAG+TGG | + | chr8.4:13754763-13754782 | None:intergenic | 30.0% | |
GATATAGATGTATGTCTGAT+TGG | - | chr8.4:13755920-13755939 | MS.gene036656:CDS | 30.0% | |
TAAGAACAACCGAAACAAAA+GGG | + | chr8.4:13754176-13754195 | None:intergenic | 30.0% | |
TCAAAATCACAACAAATCGA+AGG | + | chr8.4:13754337-13754356 | None:intergenic | 30.0% | |
TTCTGTCATGCAATCATTAT+TGG | - | chr8.4:13755098-13755117 | MS.gene036656:intron | 30.0% | |
! | ACAACAATGTCATTTGGATT+TGG | + | chr8.4:13755356-13755375 | None:intergenic | 30.0% |
! | CATTTTGTATTAGAGTCCAA+TGG | - | chr8.4:13755197-13755216 | MS.gene036656:intron | 30.0% |
!! | AAAGTATAGCCTTTGAGTTT+TGG | - | chr8.4:13754783-13754802 | MS.gene036656:intron | 30.0% |
!! | ACTTTATCAAGAAGTATCAG+AGG | - | chr8.4:13755633-13755652 | MS.gene036656:intron | 30.0% |
!! | AGCATATTATTTTGCTAGCT+AGG | + | chr8.4:13755152-13755171 | None:intergenic | 30.0% |
!! | TTCCTTTTTCCCTTTTGTTT+CGG | - | chr8.4:13754164-13754183 | MS.gene036656:CDS | 30.0% |
!! | TTTATTTGTGCCATTTCATC+AGG | - | chr8.4:13755944-13755963 | MS.gene036656:intron | 30.0% |
AAACACATGATACAAATCCC+TGG | + | chr8.4:13754994-13755013 | None:intergenic | 35.0% | |
AACCGAAACAAAAGGGAAAA+AGG | + | chr8.4:13754169-13754188 | None:intergenic | 35.0% | |
AATGTATGATGTGGATCATG+TGG | - | chr8.4:13754914-13754933 | MS.gene036656:intron | 35.0% | |
AGTCTTAAATCCAAGACCAA+CGG | + | chr8.4:13754454-13754473 | None:intergenic | 35.0% | |
ATGGAAACATTGCCAGTAAA+AGG | + | chr8.4:13755536-13755555 | None:intergenic | 35.0% | |
ATGTTATTATTGGGCAATGC+AGG | - | chr8.4:13755811-13755830 | MS.gene036656:intron | 35.0% | |
CTAAGAACAACCGAAACAAA+AGG | + | chr8.4:13754177-13754196 | None:intergenic | 35.0% | |
CTCCAAGTGCAAATAAAAAC+AGG | + | chr8.4:13755674-13755693 | None:intergenic | 35.0% | |
GACAACAAGTGTTATGACTA+GGG | + | chr8.4:13755233-13755252 | None:intergenic | 35.0% | |
GACAAGTTCCAGCTAAAATA+CGG | + | chr8.4:13755565-13755584 | None:intergenic | 35.0% | |
GGTAAAAAAGGAACCTTCAA+TGG | + | chr8.4:13754487-13754506 | None:intergenic | 35.0% | |
TCACAATGCAGAGGTAAAAA+AGG | + | chr8.4:13754499-13754518 | None:intergenic | 35.0% | |
TGACAACAAGTGTTATGACT+AGG | + | chr8.4:13755234-13755253 | None:intergenic | 35.0% | |
TGGAAACATTGCCAGTAAAA+GGG | + | chr8.4:13755535-13755554 | None:intergenic | 35.0% | |
! | AGCAACCTAAAGTGTTTCTA+TGG | - | chr8.4:13754269-13754288 | MS.gene036656:intron | 35.0% |
! | CCAATCCAACTTGAAAGTAT+AGG | - | chr8.4:13755042-13755061 | MS.gene036656:intron | 35.0% |
! | GTAGACCTATACTTTCAAGT+TGG | + | chr8.4:13755050-13755069 | None:intergenic | 35.0% |
! | TTCTTTAAATCCGTTGGTCT+TGG | - | chr8.4:13754441-13754460 | MS.gene036656:intron | 35.0% |
!! | CCTATACTTTCAAGTTGGAT+TGG | + | chr8.4:13755045-13755064 | None:intergenic | 35.0% |
!!! | AAGCTTTTGATTTCGAAACC+AGG | - | chr8.4:13754973-13754992 | MS.gene036656:intron | 35.0% |
!!! | AGCTTTTGATTTCGAAACCA+GGG | - | chr8.4:13754974-13754993 | MS.gene036656:intron | 35.0% |
!!! | GTCCTGTTTTTATTTGCACT+TGG | - | chr8.4:13755669-13755688 | MS.gene036656:intron | 35.0% |
AACCGCTTCTTTAAATCCGT+TGG | - | chr8.4:13754435-13754454 | MS.gene036656:CDS | 40.0% | |
CATGATCTCCTTCCTTAACA+CGG | + | chr8.4:13755794-13755813 | None:intergenic | 40.0% | |
CTAGGGATATCGAAAACCAT+TGG | + | chr8.4:13755216-13755235 | None:intergenic | 40.0% | |
GCCATTATGCCAAAACTCAA+AGG | + | chr8.4:13754795-13754814 | None:intergenic | 40.0% | |
GTCACAGTGCTAAGATGAAT+AGG | - | chr8.4:13755582-13755601 | MS.gene036656:intron | 40.0% | |
TGTGTGTGTGTGTGTGTAAA+CGG | - | chr8.4:13755891-13755910 | MS.gene036656:intron | 40.0% | |
TGTTGTCATTGATCGTGTCA+TGG | - | chr8.4:13755246-13755265 | MS.gene036656:intron | 40.0% | |
TTACTGGCAATGTTTCCATC+CGG | - | chr8.4:13755537-13755556 | MS.gene036656:intron | 40.0% | |
TTGTGTGTTACAGACTGAGA+AGG | - | chr8.4:13754237-13754256 | MS.gene036656:intron | 40.0% | |
! | GACCAACGGATTTAAAGAAG+CGG | + | chr8.4:13754440-13754459 | None:intergenic | 40.0% |
! | TTGGTAGCTCAAAGAAGAGT+GGG | - | chr8.4:13754385-13754404 | MS.gene036656:CDS | 40.0% |
! | TTTGGTAGCTCAAAGAAGAG+TGG | - | chr8.4:13754384-13754403 | MS.gene036656:CDS | 40.0% |
!! | GCCTTTGAGTTTTGGCATAA+TGG | - | chr8.4:13754791-13754810 | MS.gene036656:intron | 40.0% |
AAAGGAAAGAGGCCTGGAAA+AGG | - | chr8.4:13754408-13754427 | MS.gene036656:CDS | 45.0% | |
ACACGATCAACGACAACAAG+TGG | + | chr8.4:13755299-13755318 | None:intergenic | 45.0% | |
AGAAGAGTGGGAAAGGAAAG+AGG | - | chr8.4:13754397-13754416 | MS.gene036656:CDS | 45.0% | |
AGCTCAAAGAAGAGTGGGAA+AGG | - | chr8.4:13754390-13754409 | MS.gene036656:CDS | 45.0% | |
CAATCGCAGGTTCATCATTC+AGG | + | chr8.4:13754863-13754882 | None:intergenic | 45.0% | |
CAATGCAGGTGAGACTCAAT+AGG | - | chr8.4:13755825-13755844 | MS.gene036656:intron | 45.0% | |
GAACCTTCAATGGCTTCTCT+GGG | + | chr8.4:13754477-13754496 | None:intergenic | 45.0% | |
GACTATGGATCTTCAATCGC+AGG | + | chr8.4:13754876-13754895 | None:intergenic | 45.0% | |
GTGTCATGGCATCATCTACT+TGG | - | chr8.4:13755260-13755279 | MS.gene036656:intron | 45.0% | |
TACTGGCAATGTTTCCATCC+GGG | - | chr8.4:13755538-13755557 | MS.gene036656:intron | 45.0% | |
TGTTGTCGTTGATCGTGTCA+TGG | - | chr8.4:13755301-13755320 | MS.gene036656:intron | 45.0% | |
! | AGGGCACTTCTTGTCAATGT+AGG | + | chr8.4:13755516-13755535 | None:intergenic | 45.0% |
!!! | GACAAGAAGTGCCCTTTTAC+TGG | - | chr8.4:13755521-13755540 | MS.gene036656:intron | 45.0% |
!! | AAAATAAAAAAAATCATAAA+AGG | + | chr8.4:13755482-13755501 | None:intergenic | 5.0% |
AACCTCACAGTCTTGGAGAG+AGG | + | chr8.4:13755970-13755989 | None:intergenic | 50.0% | |
AAGCAGGGTGATACATGAGC+AGG | + | chr8.4:13755771-13755790 | None:intergenic | 50.0% | |
ACTCCCAGAGAAGCCATTGA+AGG | - | chr8.4:13754471-13754490 | MS.gene036656:intron | 50.0% | |
ACTGGCAATGTTTCCATCCG+GGG | - | chr8.4:13755539-13755558 | MS.gene036656:intron | 50.0% | |
ATCACCCTGCTTCCGTGTTA+AGG | - | chr8.4:13755779-13755798 | MS.gene036656:CDS | 50.0% | |
CCTTCCTTAACACGGAAGCA+GGG | + | chr8.4:13755786-13755805 | None:intergenic | 50.0% | |
GACGTTGAACCTCACAGTCT+TGG | + | chr8.4:13755977-13755996 | None:intergenic | 50.0% | |
GGAACCTTCAATGGCTTCTC+TGG | + | chr8.4:13754478-13754497 | None:intergenic | 50.0% | |
GTCTTGAAAGTGATCCCAGC+TGG | - | chr8.4:13755994-13756013 | MS.gene036656:intron | 50.0% | |
TCCTTCCTTAACACGGAAGC+AGG | + | chr8.4:13755787-13755806 | None:intergenic | 50.0% | |
TGCAGGTGAGACTCAATAGG+AGG | - | chr8.4:13755828-13755847 | MS.gene036656:intron | 50.0% | |
TGGAGAGAGGCCTGATGAAA+TGG | + | chr8.4:13755957-13755976 | None:intergenic | 50.0% | |
TTCCAGCTAAAATACGGCCC+CGG | + | chr8.4:13755559-13755578 | None:intergenic | 50.0% | |
! | AAGCGGTTTCCACCTTTTCC+AGG | + | chr8.4:13754423-13754442 | None:intergenic | 50.0% |
!! | TGCTGGGAAGAAGGCATTAC+TGG | - | chr8.4:13756029-13756048 | MS.gene036656:intron | 50.0% |
AGCTAAAATACGGCCCCGGA+TGG | + | chr8.4:13755555-13755574 | None:intergenic | 55.0% | |
AGTGGGAAAGGAAAGAGGCC+TGG | - | chr8.4:13754402-13754421 | MS.gene036656:CDS | 55.0% | |
CACCACTGGATGAACCAGCT+GGG | + | chr8.4:13756011-13756030 | None:intergenic | 55.0% | |
CCCTGCTTCCGTGTTAAGGA+AGG | - | chr8.4:13755783-13755802 | MS.gene036656:CDS | 55.0% | |
CTGGTTCATCCAGTGGTGCT+GGG | - | chr8.4:13756013-13756032 | MS.gene036656:intron | 55.0% | |
GGAAAGAGGCCTGGAAAAGG+TGG | - | chr8.4:13754411-13754430 | MS.gene036656:CDS | 55.0% | |
! | ATCCAGTGGTGCTGGGAAGA+AGG | - | chr8.4:13756020-13756039 | MS.gene036656:intron | 55.0% |
! | ATCCCAGCTGGTTCATCCAG+TGG | - | chr8.4:13756006-13756025 | MS.gene036656:intron | 55.0% |
!!! | ATCCGGGGCCGTATTTTAGC+TGG | - | chr8.4:13755554-13755573 | MS.gene036656:intron | 55.0% |
GCACCACTGGATGAACCAGC+TGG | + | chr8.4:13756012-13756031 | None:intergenic | 60.0% | |
GGCCTCTCTCCAAGACTGTG+AGG | - | chr8.4:13755965-13755984 | MS.gene036656:intron | 60.0% | |
TGCCTTCTTCCCAGCACCAC+TGG | + | chr8.4:13756025-13756044 | None:intergenic | 60.0% | |
! | GCTGGTTCATCCAGTGGTGC+TGG | - | chr8.4:13756012-13756031 | MS.gene036656:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 13754137 | 13756065 | 13754137 | ID=MS.gene036656 |
chr8.4 | mRNA | 13754137 | 13756065 | 13754137 | ID=MS.gene036656.t1;Parent=MS.gene036656 |
chr8.4 | exon | 13756054 | 13756065 | 13756054 | ID=MS.gene036656.t1.exon1;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13756054 | 13756065 | 13756054 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
chr8.4 | exon | 13755912 | 13755952 | 13755912 | ID=MS.gene036656.t1.exon2;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13755912 | 13755952 | 13755912 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
chr8.4 | exon | 13755710 | 13755810 | 13755710 | ID=MS.gene036656.t1.exon3;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13755710 | 13755810 | 13755710 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
chr8.4 | exon | 13754548 | 13754692 | 13754548 | ID=MS.gene036656.t1.exon4;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13754548 | 13754692 | 13754548 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
chr8.4 | exon | 13754370 | 13754459 | 13754370 | ID=MS.gene036656.t1.exon5;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13754370 | 13754459 | 13754370 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
chr8.4 | exon | 13754137 | 13754236 | 13754137 | ID=MS.gene036656.t1.exon6;Parent=MS.gene036656.t1 |
chr8.4 | CDS | 13754137 | 13754236 | 13754137 | ID=cds.MS.gene036656.t1;Parent=MS.gene036656.t1 |
Gene Sequence |
Protein sequence |