Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072806.t1 | XP_003611130.2 | 98.7 | 236 | 3 | 0 | 1 | 236 | 1 | 236 | 1.40E-134 | 488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072806.t1 | P50700 | 57.5 | 228 | 87 | 2 | 9 | 236 | 6 | 223 | 2.0e-76 | 287.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072806.t1 | G7KDF3 | 98.7 | 236 | 3 | 0 | 1 | 236 | 1 | 236 | 1.0e-134 | 488.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene072806 | -0.837151 | 6.16E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene072806 | -0.851995 | 6.17E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene072806 | -0.834654 | 2.64E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene072806 | -0.82847 | 8.83E-55 | -1.69E-46 |
| MS.gene049259 | MS.gene072806 | 0.853067 | 3.05E-61 | -1.69E-46 |
| MS.gene049281 | MS.gene072806 | 0.842985 | 1.85E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene072806 | -0.832408 | 9.61E-56 | -1.69E-46 |
| MS.gene049312 | MS.gene072806 | 0.826994 | 2.00E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene072806 | -0.845562 | 3.76E-59 | -1.69E-46 |
| MS.gene049483 | MS.gene072806 | 0.842408 | 2.63E-58 | -1.69E-46 |
| MS.gene049611 | MS.gene072806 | 0.858102 | 1.04E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene072806 | -0.818061 | 2.39E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene072806 | 0.836563 | 8.70E-57 | -1.69E-46 |
| MS.gene050082 | MS.gene072806 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene072806 | 0.806256 | 8.99E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene072806 | -0.827972 | 1.16E-54 | -1.69E-46 |
| MS.gene050129 | MS.gene072806 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene072806 | -0.824467 | 7.95E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene072806 | -0.823432 | 1.39E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene072806 | -0.80404 | 2.61E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene072806 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene072806 | -0.857842 | 1.24E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene072806 | -0.822786 | 1.97E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene072806 | -0.818979 | 1.48E-52 | -1.69E-46 |
| MS.gene050363 | MS.gene072806 | 0.852099 | 5.76E-61 | -1.69E-46 |
| MS.gene050380 | MS.gene072806 | 0.887523 | 1.32E-72 | -1.69E-46 |
| MS.gene050381 | MS.gene072806 | 0.990496 | 6.53E-183 | -1.69E-46 |
| MS.gene050496 | MS.gene072806 | -0.823491 | 1.35E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene072806 | -0.869358 | 3.29E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene072806 | -0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene072806 | -0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene072806 | -0.857605 | 1.46E-62 | -1.69E-46 |
| MS.gene050662 | MS.gene072806 | -0.824828 | 6.53E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene072806 | -0.821844 | 3.25E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene072806 | -0.813374 | 2.64E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene072806 | -0.812157 | 4.88E-51 | -1.69E-46 |
| MS.gene05079 | MS.gene072806 | 0.805528 | 1.28E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene072806 | 0.819769 | 9.76E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene072806 | -0.842176 | 3.03E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene072806 | -0.870433 | 1.47E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene072806 | -0.872436 | 3.18E-67 | -1.69E-46 |
| MS.gene050883 | MS.gene072806 | 0.87923 | 1.48E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene072806 | -0.825016 | 5.90E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene072806 | 0.860798 | 1.61E-63 | -1.69E-46 |
| MS.gene05104 | MS.gene072806 | 0.849874 | 2.44E-60 | -1.69E-46 |
| MS.gene051127 | MS.gene072806 | 0.873511 | 1.39E-67 | -1.69E-46 |
| MS.gene051138 | MS.gene072806 | 0.859662 | 3.54E-63 | -1.69E-46 |
| MS.gene051268 | MS.gene072806 | -0.818414 | 1.98E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene072806 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene072806 | 0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene072806 | 0.863245 | 2.86E-64 | -1.69E-46 |
| MS.gene051632 | MS.gene072806 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene072806 | -0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene072806 | -0.831494 | 1.62E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene072806 | -0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene072806 | 0.897585 | 1.22E-76 | -1.69E-46 |
| MS.gene052164 | MS.gene072806 | -0.862133 | 6.29E-64 | -1.69E-46 |
| MS.gene052329 | MS.gene072806 | 0.805054 | 1.61E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene072806 | 0.826089 | 3.28E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene072806 | 0.804799 | 1.82E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene072806 | -0.836037 | 1.18E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene072806 | -0.835824 | 1.34E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene072806 | -0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene052566 | MS.gene072806 | 0.823182 | 1.59E-53 | -1.69E-46 |
| MS.gene052802 | MS.gene072806 | 0.822358 | 2.47E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene072806 | -0.814278 | 1.67E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene072806 | -0.823444 | 1.38E-53 | -1.69E-46 |
| MS.gene053069 | MS.gene072806 | 0.828825 | 7.25E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene072806 | -0.838142 | 3.43E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene072806 | -0.806899 | 6.57E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene072806 | -0.804894 | 1.73E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene072806 | 0.895913 | 6.10E-76 | -1.69E-46 |
| MS.gene053436 | MS.gene072806 | -0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene072806 | 0.862202 | 5.99E-64 | -1.69E-46 |
| MS.gene053549 | MS.gene072806 | 0.841891 | 3.61E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene072806 | 0.897606 | 1.20E-76 | -1.69E-46 |
| MS.gene053574 | MS.gene072806 | -0.820913 | 5.33E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene072806 | -0.814188 | 1.75E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene072806 | -0.813461 | 2.53E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene072806 | -0.810649 | 1.04E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene072806 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene054003 | MS.gene072806 | -0.841476 | 4.64E-58 | -1.69E-46 |
| MS.gene054054 | MS.gene072806 | 0.837829 | 4.13E-57 | -1.69E-46 |
| MS.gene054056 | MS.gene072806 | 0.859319 | 4.49E-63 | -1.69E-46 |
| MS.gene054290 | MS.gene072806 | 0.803584 | 3.25E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene072806 | -0.846335 | 2.32E-59 | -1.69E-46 |
| MS.gene054616 | MS.gene072806 | 0.860921 | 1.47E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene072806 | -0.829928 | 3.91E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene072806 | 0.864806 | 9.33E-65 | -1.69E-46 |
| MS.gene054707 | MS.gene072806 | 0.833226 | 6.02E-56 | -1.69E-46 |
| MS.gene054708 | MS.gene072806 | 0.882846 | 7.40E-71 | -1.69E-46 |
| MS.gene05470 | MS.gene072806 | -0.817791 | 2.75E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene072806 | -0.836657 | 8.23E-57 | -1.69E-46 |
| MS.gene054959 | MS.gene072806 | 0.844431 | 7.59E-59 | -1.69E-46 |
| MS.gene055124 | MS.gene072806 | 0.89308 | 8.76E-75 | -1.69E-46 |
| MS.gene055139 | MS.gene072806 | 0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene072806 | 0.894132 | 3.29E-75 | -1.69E-46 |
| MS.gene055202 | MS.gene072806 | 0.866547 | 2.63E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene072806 | -0.841932 | 3.52E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene072806 | -0.861561 | 9.41E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene072806 | -0.856468 | 3.15E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene072806 | -0.814387 | 1.58E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene072806 | -0.805986 | 1.02E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene072806 | -0.816404 | 5.63E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene072806 | -0.814446 | 1.53E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene072806 | -0.846706 | 1.84E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene072806 | -0.806226 | 9.12E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene072806 | 0.817438 | 3.30E-52 | -1.69E-46 |
| MS.gene055959 | MS.gene072806 | 0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene072806 | 0.825955 | 3.53E-54 | -1.69E-46 |
| MS.gene056310 | MS.gene072806 | 0.898509 | 4.95E-77 | -1.69E-46 |
| MS.gene056311 | MS.gene072806 | 0.898286 | 6.16E-77 | -1.69E-46 |
| MS.gene056313 | MS.gene072806 | 0.900653 | 5.91E-78 | -1.69E-46 |
| MS.gene056359 | MS.gene072806 | 0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene056408 | MS.gene072806 | 0.830979 | 2.16E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene072806 | -0.861934 | 7.24E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene072806 | -0.831558 | 1.56E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene072806 | -0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene072806 | 0.828982 | 6.64E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene072806 | -0.830058 | 3.64E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene072806 | 0.827767 | 1.30E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene072806 | 0.89978 | 1.41E-77 | -1.69E-46 |
| MS.gene057086 | MS.gene072806 | -0.811686 | 6.18E-51 | -1.69E-46 |
| MS.gene057291 | MS.gene072806 | 0.812944 | 3.28E-51 | -1.69E-46 |
| MS.gene057293 | MS.gene072806 | 0.807926 | 3.98E-50 | -1.69E-46 |
| MS.gene057473 | MS.gene072806 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene072806 | 0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene057770 | MS.gene072806 | 0.805349 | 1.39E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene072806 | 0.824088 | 9.75E-54 | -1.69E-46 |
| MS.gene058068 | MS.gene072806 | 0.86076 | 1.65E-63 | -1.69E-46 |
| MS.gene058093 | MS.gene072806 | 0.858 | 1.11E-62 | -1.69E-46 |
| MS.gene058099 | MS.gene072806 | 0.878604 | 2.46E-69 | -1.69E-46 |
| MS.gene058108 | MS.gene072806 | 0.82119 | 4.60E-53 | -1.69E-46 |
| MS.gene058109 | MS.gene072806 | 0.859585 | 3.74E-63 | -1.69E-46 |
| MS.gene058111 | MS.gene072806 | 0.827158 | 1.83E-54 | -1.69E-46 |
| MS.gene058117 | MS.gene072806 | 0.815844 | 7.50E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene072806 | -0.828434 | 9.01E-55 | -1.69E-46 |
| MS.gene058170 | MS.gene072806 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene072806 | 0.888533 | 5.42E-73 | -1.69E-46 |
| MS.gene058173 | MS.gene072806 | 0.871219 | 8.07E-67 | -1.69E-46 |
| MS.gene058174 | MS.gene072806 | 0.807089 | 5.99E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene072806 | 0.88616 | 4.35E-72 | -1.69E-46 |
| MS.gene058176 | MS.gene072806 | 0.805716 | 1.17E-49 | -1.69E-46 |
| MS.gene058179 | MS.gene072806 | 0.828153 | 1.05E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene072806 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene072806 | 0.852558 | 4.27E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene072806 | 0.851474 | 8.67E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene072806 | -0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene072806 | -0.849512 | 3.08E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene072806 | -0.840319 | 9.34E-58 | -1.69E-46 |
| MS.gene058493 | MS.gene072806 | 0.847468 | 1.13E-59 | -1.69E-46 |
| MS.gene058494 | MS.gene072806 | 0.827514 | 1.50E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene072806 | -0.831688 | 1.45E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene072806 | 0.821707 | 3.50E-53 | -1.69E-46 |
| MS.gene058628 | MS.gene072806 | 0.824959 | 6.08E-54 | -1.69E-46 |
| MS.gene058629 | MS.gene072806 | 0.825038 | 5.83E-54 | -1.69E-46 |
| MS.gene058630 | MS.gene072806 | 0.823265 | 1.52E-53 | -1.69E-46 |
| MS.gene058691 | MS.gene072806 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene072806 | -0.829026 | 6.48E-55 | -1.69E-46 |
| MS.gene058840 | MS.gene072806 | 0.872685 | 2.63E-67 | -1.69E-46 |
| MS.gene05884 | MS.gene072806 | 0.813703 | 2.24E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene072806 | 0.816475 | 5.43E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene072806 | -0.865269 | 6.67E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene072806 | -0.828875 | 7.05E-55 | -1.69E-46 |
| MS.gene059037 | MS.gene072806 | 0.856776 | 2.56E-62 | -1.69E-46 |
| MS.gene059038 | MS.gene072806 | 0.816063 | 6.71E-52 | -1.69E-46 |
| MS.gene059044 | MS.gene072806 | 0.816727 | 4.76E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene072806 | 0.881048 | 3.32E-70 | -1.69E-46 |
| MS.gene05913 | MS.gene072806 | -0.823151 | 1.62E-53 | -1.69E-46 |
| MS.gene059223 | MS.gene072806 | 0.871127 | 8.66E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene072806 | -0.843044 | 1.78E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene072806 | -0.826306 | 2.92E-54 | -1.69E-46 |
| MS.gene059682 | MS.gene072806 | 0.819345 | 1.22E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene072806 | 0.859481 | 4.01E-63 | -1.69E-46 |
| MS.gene059691 | MS.gene072806 | 0.844416 | 7.66E-59 | -1.69E-46 |
| MS.gene059694 | MS.gene072806 | 0.864404 | 1.25E-64 | -1.69E-46 |
| MS.gene059697 | MS.gene072806 | 0.875888 | 2.16E-68 | -1.69E-46 |
| MS.gene059703 | MS.gene072806 | 0.808573 | 2.90E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene072806 | -0.842748 | 2.14E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene072806 | -0.808824 | 2.56E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene072806 | -0.867163 | 1.68E-65 | -1.69E-46 |
| MS.gene059902 | MS.gene072806 | -0.832538 | 8.93E-56 | -1.69E-46 |
| MS.gene059916 | MS.gene072806 | 0.84296 | 1.88E-58 | -1.69E-46 |
| MS.gene059943 | MS.gene072806 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene059944 | MS.gene072806 | 0.813987 | 1.94E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene072806 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene060205 | MS.gene072806 | 0.806498 | 7.99E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene072806 | -0.853577 | 2.18E-61 | -1.69E-46 |
| MS.gene060595 | MS.gene072806 | 0.865404 | 6.05E-65 | -1.69E-46 |
| MS.gene060703 | MS.gene072806 | -0.832556 | 8.84E-56 | -1.69E-46 |
| MS.gene06074 | MS.gene072806 | 0.821069 | 4.91E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene072806 | -0.837035 | 6.59E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene072806 | -0.845452 | 4.03E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene072806 | -0.858662 | 7.06E-63 | -1.69E-46 |
| MS.gene060808 | MS.gene072806 | 0.81931 | 1.24E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene072806 | -0.831693 | 1.44E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene072806 | -0.800014 | 1.76E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072806.t1 | MTR_5g010640 | 98.729 | 236 | 3 | 0 | 1 | 236 | 1 | 236 | 1.16e-172 | 474 |
| MS.gene072806.t1 | MTR_8g096900 | 55.508 | 236 | 92 | 3 | 3 | 236 | 24 | 248 | 5.02e-91 | 268 |
| MS.gene072806.t1 | MTR_5g010635 | 57.477 | 214 | 82 | 1 | 23 | 236 | 21 | 225 | 5.61e-89 | 263 |
| MS.gene072806.t1 | MTR_8g075510 | 41.772 | 237 | 119 | 8 | 11 | 236 | 16 | 244 | 2.69e-51 | 167 |
| MS.gene072806.t1 | MTR_1g025420 | 41.200 | 250 | 118 | 8 | 8 | 235 | 3 | 245 | 3.53e-51 | 167 |
| MS.gene072806.t1 | MTR_1g025420 | 41.200 | 250 | 118 | 8 | 8 | 235 | 3 | 245 | 5.15e-51 | 169 |
| MS.gene072806.t1 | MTR_5g059200 | 42.460 | 252 | 115 | 9 | 1 | 235 | 1 | 239 | 1.20e-50 | 166 |
| MS.gene072806.t1 | MTR_8g037890 | 40.392 | 255 | 125 | 9 | 1 | 236 | 1 | 247 | 2.63e-50 | 167 |
| MS.gene072806.t1 | MTR_8g075510 | 41.525 | 236 | 119 | 8 | 11 | 235 | 16 | 243 | 6.79e-50 | 165 |
| MS.gene072806.t1 | MTR_3g114030 | 42.017 | 238 | 109 | 8 | 20 | 236 | 1 | 230 | 1.44e-49 | 162 |
| MS.gene072806.t1 | MTR_8g036215 | 39.600 | 250 | 121 | 9 | 3 | 235 | 1 | 237 | 4.48e-49 | 161 |
| MS.gene072806.t1 | MTR_8g056820 | 38.911 | 257 | 126 | 9 | 1 | 236 | 1 | 247 | 9.57e-49 | 161 |
| MS.gene072806.t1 | MTR_5g022350 | 40.586 | 239 | 121 | 10 | 9 | 236 | 15 | 243 | 1.33e-48 | 162 |
| MS.gene072806.t1 | MTR_8g075550 | 42.324 | 241 | 107 | 8 | 19 | 235 | 21 | 253 | 4.89e-48 | 160 |
| MS.gene072806.t1 | MTR_8g107140 | 39.921 | 253 | 124 | 8 | 2 | 236 | 3 | 245 | 7.38e-48 | 158 |
| MS.gene072806.t1 | MTR_3g111620 | 37.795 | 254 | 132 | 9 | 1 | 236 | 1 | 246 | 2.60e-47 | 157 |
| MS.gene072806.t1 | MTR_5g022310 | 38.610 | 259 | 128 | 9 | 1 | 236 | 1 | 251 | 2.61e-47 | 157 |
| MS.gene072806.t1 | MTR_5g022310 | 38.610 | 259 | 128 | 9 | 1 | 236 | 1 | 251 | 6.83e-47 | 157 |
| MS.gene072806.t1 | MTR_6g079580 | 38.340 | 253 | 123 | 10 | 4 | 236 | 1 | 240 | 9.29e-47 | 155 |
| MS.gene072806.t1 | MTR_1g021945 | 41.126 | 231 | 111 | 7 | 23 | 236 | 23 | 245 | 1.02e-46 | 155 |
| MS.gene072806.t1 | MTR_7g062610 | 36.694 | 248 | 132 | 8 | 6 | 236 | 3 | 242 | 4.34e-46 | 154 |
| MS.gene072806.t1 | MTR_8g096910 | 46.914 | 162 | 79 | 3 | 1 | 161 | 1 | 156 | 4.38e-46 | 151 |
| MS.gene072806.t1 | MTR_4g073730 | 38.710 | 248 | 122 | 9 | 11 | 236 | 9 | 248 | 7.57e-46 | 154 |
| MS.gene072806.t1 | MTR_4g073720 | 38.956 | 249 | 128 | 10 | 1 | 235 | 1 | 239 | 1.33e-45 | 155 |
| MS.gene072806.t1 | MTR_4g073730 | 38.710 | 248 | 122 | 9 | 11 | 236 | 9 | 248 | 1.56e-45 | 154 |
| MS.gene072806.t1 | MTR_3g068015 | 36.719 | 256 | 130 | 11 | 5 | 236 | 1 | 248 | 7.81e-45 | 150 |
| MS.gene072806.t1 | MTR_2g069660 | 37.200 | 250 | 132 | 7 | 5 | 236 | 1 | 243 | 2.81e-44 | 149 |
| MS.gene072806.t1 | MTR_1g062630 | 37.719 | 228 | 116 | 8 | 27 | 236 | 23 | 242 | 6.51e-43 | 146 |
| MS.gene072806.t1 | MTR_8g096920 | 46.914 | 162 | 76 | 3 | 1 | 161 | 1 | 153 | 3.53e-42 | 141 |
| MS.gene072806.t1 | MTR_2g067980 | 40.984 | 244 | 111 | 11 | 15 | 236 | 15 | 247 | 3.24e-41 | 150 |
| MS.gene072806.t1 | MTR_2g068655 | 38.197 | 233 | 117 | 9 | 23 | 236 | 28 | 252 | 4.06e-41 | 142 |
| MS.gene072806.t1 | MTR_1g062590 | 37.008 | 254 | 130 | 10 | 1 | 236 | 1 | 242 | 5.98e-41 | 140 |
| MS.gene072806.t1 | MTR_7g102380 | 34.000 | 250 | 138 | 9 | 5 | 236 | 1 | 241 | 3.42e-40 | 138 |
| MS.gene072806.t1 | MTR_1g062350 | 35.857 | 251 | 134 | 9 | 4 | 236 | 1 | 242 | 3.42e-39 | 136 |
| MS.gene072806.t1 | MTR_1g062340 | 37.719 | 228 | 116 | 8 | 27 | 236 | 23 | 242 | 5.30e-39 | 135 |
| MS.gene072806.t1 | MTR_1g062370 | 35.458 | 251 | 135 | 9 | 4 | 236 | 1 | 242 | 1.01e-38 | 134 |
| MS.gene072806.t1 | MTR_2g068030 | 40.254 | 236 | 112 | 10 | 20 | 235 | 17 | 243 | 1.08e-38 | 135 |
| MS.gene072806.t1 | MTR_1g062660 | 35.060 | 251 | 136 | 9 | 4 | 236 | 1 | 242 | 3.93e-38 | 133 |
| MS.gene072806.t1 | MTR_4g063630 | 33.471 | 242 | 134 | 8 | 14 | 235 | 17 | 251 | 2.91e-37 | 131 |
| MS.gene072806.t1 | MTR_6g009480 | 34.231 | 260 | 139 | 11 | 1 | 236 | 1 | 252 | 4.85e-36 | 128 |
| MS.gene072806.t1 | MTR_2g067990 | 40.465 | 215 | 107 | 9 | 25 | 236 | 26 | 222 | 1.31e-32 | 125 |
| MS.gene072806.t1 | MTR_1g062690 | 32.800 | 250 | 119 | 9 | 4 | 236 | 1 | 218 | 6.10e-30 | 111 |
| MS.gene072806.t1 | MTR_1g062390 | 29.084 | 251 | 144 | 9 | 3 | 236 | 5 | 238 | 3.59e-26 | 102 |
| MS.gene072806.t1 | MTR_2g067970 | 39.247 | 186 | 92 | 9 | 64 | 236 | 5 | 182 | 7.42e-26 | 105 |
| MS.gene072806.t1 | MTR_8g089020 | 43.382 | 136 | 61 | 5 | 100 | 228 | 31 | 157 | 1.57e-24 | 95.5 |
| MS.gene072806.t1 | MTR_5g023850 | 37.209 | 172 | 91 | 6 | 7 | 163 | 9 | 178 | 5.02e-24 | 96.3 |
| MS.gene072806.t1 | MTR_5g022350 | 38.971 | 136 | 73 | 6 | 9 | 137 | 80 | 212 | 1.44e-20 | 87.0 |
| MS.gene072806.t1 | MTR_7g076360 | 29.524 | 210 | 88 | 7 | 21 | 226 | 3 | 156 | 1.91e-15 | 72.0 |
| MS.gene072806.t1 | MTR_2g063150 | 26.540 | 211 | 130 | 8 | 30 | 224 | 38 | 239 | 5.08e-14 | 69.7 |
| MS.gene072806.t1 | MTR_5g068670 | 46.970 | 66 | 33 | 2 | 70 | 134 | 25 | 89 | 2.39e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072806.t1 | AT4G11650 | 57.456 | 228 | 87 | 2 | 9 | 236 | 6 | 223 | 1.38e-95 | 280 |
| MS.gene072806.t1 | AT1G75050 | 42.105 | 247 | 118 | 7 | 7 | 236 | 5 | 243 | 9.71e-54 | 173 |
| MS.gene072806.t1 | AT1G75040 | 42.623 | 244 | 117 | 7 | 7 | 236 | 5 | 239 | 2.84e-53 | 172 |
| MS.gene072806.t1 | AT1G75800 | 42.169 | 249 | 113 | 8 | 11 | 236 | 8 | 248 | 4.18e-53 | 174 |
| MS.gene072806.t1 | AT1G75030 | 40.486 | 247 | 122 | 7 | 7 | 236 | 5 | 243 | 6.82e-53 | 171 |
| MS.gene072806.t1 | AT4G38670 | 39.370 | 254 | 125 | 9 | 5 | 236 | 1 | 247 | 1.14e-50 | 166 |
| MS.gene072806.t1 | AT4G38670 | 39.370 | 254 | 125 | 9 | 5 | 236 | 1 | 247 | 1.14e-50 | 166 |
| MS.gene072806.t1 | AT1G19320 | 39.764 | 254 | 126 | 8 | 1 | 235 | 1 | 246 | 8.01e-50 | 163 |
| MS.gene072806.t1 | AT2G17860 | 41.897 | 253 | 115 | 9 | 8 | 236 | 5 | 249 | 9.15e-50 | 163 |
| MS.gene072806.t1 | AT1G77700 | 41.841 | 239 | 116 | 8 | 9 | 235 | 44 | 271 | 1.14e-49 | 165 |
| MS.gene072806.t1 | AT1G77700 | 41.841 | 239 | 116 | 8 | 9 | 235 | 44 | 271 | 1.60e-49 | 165 |
| MS.gene072806.t1 | AT4G36010 | 44.444 | 234 | 97 | 9 | 28 | 236 | 25 | 250 | 1.10e-48 | 162 |
| MS.gene072806.t1 | AT4G36010 | 44.444 | 234 | 97 | 9 | 28 | 236 | 25 | 250 | 1.10e-48 | 162 |
| MS.gene072806.t1 | AT4G38660 | 39.184 | 245 | 126 | 9 | 6 | 236 | 10 | 245 | 2.37e-48 | 162 |
| MS.gene072806.t1 | AT4G38670 | 40.756 | 238 | 113 | 8 | 20 | 236 | 1 | 231 | 7.17e-48 | 159 |
| MS.gene072806.t1 | AT1G77700 | 42.478 | 226 | 107 | 8 | 22 | 235 | 85 | 299 | 8.30e-48 | 161 |
| MS.gene072806.t1 | AT1G20030 | 40.260 | 231 | 109 | 7 | 28 | 236 | 5 | 228 | 1.15e-47 | 159 |
| MS.gene072806.t1 | AT4G38660 | 42.601 | 223 | 105 | 9 | 28 | 236 | 10 | 223 | 1.17e-47 | 160 |
| MS.gene072806.t1 | AT1G20030 | 40.260 | 231 | 109 | 7 | 28 | 236 | 22 | 245 | 1.44e-47 | 159 |
| MS.gene072806.t1 | AT5G24620 | 37.698 | 252 | 124 | 9 | 9 | 236 | 9 | 251 | 6.30e-46 | 158 |
| MS.gene072806.t1 | AT5G38280 | 37.097 | 248 | 127 | 7 | 11 | 236 | 10 | 250 | 8.93e-46 | 161 |
| MS.gene072806.t1 | AT5G24620 | 37.698 | 252 | 124 | 9 | 9 | 236 | 64 | 306 | 9.21e-46 | 159 |
| MS.gene072806.t1 | AT5G24620 | 37.698 | 252 | 124 | 9 | 9 | 236 | 85 | 327 | 9.73e-46 | 159 |
| MS.gene072806.t1 | AT5G38280 | 37.097 | 248 | 127 | 7 | 11 | 236 | 10 | 250 | 1.11e-45 | 161 |
| MS.gene072806.t1 | AT1G73620 | 38.362 | 232 | 115 | 8 | 23 | 236 | 39 | 260 | 1.00e-42 | 145 |
| MS.gene072806.t1 | AT1G18250 | 37.931 | 232 | 118 | 7 | 22 | 236 | 18 | 240 | 1.82e-42 | 144 |
| MS.gene072806.t1 | AT1G18250 | 38.095 | 231 | 117 | 7 | 23 | 236 | 18 | 239 | 1.83e-42 | 144 |
| MS.gene072806.t1 | AT4G24180 | 34.601 | 263 | 126 | 11 | 4 | 236 | 5 | 251 | 4.41e-42 | 144 |
| MS.gene072806.t1 | AT4G24180 | 35.827 | 254 | 118 | 10 | 12 | 236 | 19 | 256 | 9.08e-42 | 143 |
| MS.gene072806.t1 | AT4G24180 | 34.601 | 263 | 126 | 11 | 4 | 236 | 5 | 251 | 1.16e-41 | 144 |
| MS.gene072806.t1 | AT4G24180 | 35.827 | 254 | 118 | 10 | 12 | 236 | 19 | 256 | 2.44e-41 | 143 |
| MS.gene072806.t1 | AT5G02140 | 36.000 | 250 | 133 | 10 | 5 | 236 | 1 | 241 | 1.14e-40 | 140 |
| MS.gene072806.t1 | AT5G02140 | 36.000 | 250 | 133 | 10 | 5 | 236 | 1 | 241 | 1.28e-40 | 141 |
| MS.gene072806.t1 | AT4G24180 | 33.198 | 247 | 120 | 10 | 4 | 220 | 5 | 236 | 5.02e-36 | 130 |
| MS.gene072806.t1 | AT4G24180 | 34.454 | 238 | 112 | 9 | 12 | 220 | 19 | 241 | 7.56e-36 | 129 |
| MS.gene072806.t1 | AT5G40020 | 33.921 | 227 | 124 | 8 | 28 | 236 | 30 | 248 | 1.13e-34 | 124 |
| MS.gene072806.t1 | AT2G28790 | 31.373 | 255 | 145 | 8 | 4 | 235 | 1 | 248 | 5.63e-33 | 120 |
| MS.gene072806.t1 | AT1G70250 | 33.778 | 225 | 129 | 6 | 28 | 236 | 147 | 367 | 6.74e-33 | 126 |
| MS.gene072806.t1 | AT2G28790 | 31.373 | 255 | 145 | 8 | 4 | 235 | 26 | 273 | 8.55e-33 | 120 |
| MS.gene072806.t1 | AT4G36000 | 44.521 | 146 | 70 | 5 | 94 | 236 | 1 | 138 | 3.40e-32 | 117 |
| MS.gene072806.t1 | AT4G36000 | 44.521 | 146 | 70 | 5 | 94 | 236 | 1 | 138 | 3.40e-32 | 117 |
| MS.gene072806.t1 | AT4G18253 | 31.967 | 244 | 135 | 9 | 11 | 236 | 8 | 238 | 3.20e-29 | 110 |
| MS.gene072806.t1 | AT4G18250 | 34.545 | 220 | 123 | 7 | 30 | 236 | 61 | 272 | 3.40e-24 | 100 |
| MS.gene072806.t1 | AT5G24620 | 38.583 | 127 | 57 | 4 | 124 | 236 | 15 | 134 | 6.47e-18 | 81.3 |
| MS.gene072806.t1 | AT2G24810 | 25.926 | 243 | 121 | 8 | 1 | 235 | 1 | 192 | 2.63e-14 | 69.3 |
Find 63 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTATTCTAAGTTCTTTA+AGG | 0.109038 | 5.3:-4190449 | MS.gene072806:CDS |
| GTGCTGGTTGCATCATCTTT+AGG | 0.231896 | 5.3:+4190400 | None:intergenic |
| TGCTGGTTGCATCATCTTTA+GGG | 0.281050 | 5.3:+4190401 | None:intergenic |
| GTACAAGTAACGCAAGAATC+TGG | 0.345424 | 5.3:-4190852 | MS.gene072806:CDS |
| AATTGTACTGCCGATATTAA+CGG | 0.362766 | 5.3:-4190607 | MS.gene072806:CDS |
| TCCTGCTTGTGCTGCAGCTA+TGG | 0.386772 | 5.3:+4190984 | None:intergenic |
| AATTGCACTTTCGACAATTC+AGG | 0.390196 | 5.3:-4190820 | MS.gene072806:CDS |
| TGCTGCAGCTATGGATGTTA+TGG | 0.396488 | 5.3:+4190993 | None:intergenic |
| CATCCACCTGGTACCTTAAG+TGG | 0.408658 | 5.3:+4190571 | None:intergenic |
| AAGAACTTAGAATAAGTTGT+TGG | 0.409578 | 5.3:+4190454 | None:intergenic |
| GCAAATTCCATGATTGTGTT+TGG | 0.415246 | 5.3:+4190733 | None:intergenic |
| TTAGGGTAACTATAAGCATA+AGG | 0.421618 | 5.3:+4190418 | None:intergenic |
| ACACTAGAGTGTCAAACAAT+AGG | 0.437709 | 5.3:-4190763 | MS.gene072806:CDS |
| TGAATTGTCGAAAGTGCAAT+TGG | 0.451662 | 5.3:+4190822 | None:intergenic |
| TTGAGTTTCATGCCACCGCC+GGG | 0.462414 | 5.3:+4190910 | None:intergenic |
| GCCACCGCCGGGGAAGGCTG+CGG | 0.464024 | 5.3:+4190921 | None:intergenic |
| GTTGAGTTTCATGCCACCGC+CGG | 0.464550 | 5.3:+4190909 | None:intergenic |
| GCCGCAGCCTTCCCCGGCGG+TGG | 0.465884 | 5.3:-4190922 | MS.gene072806:CDS |
| ACTTTCGACAATTCAGGTCT+CGG | 0.467109 | 5.3:-4190814 | MS.gene072806:CDS |
| ATTCTAAGTTCTTTAAGGAT+AGG | 0.468720 | 5.3:-4190444 | MS.gene072806:CDS |
| TTTCATGCCACCGCCGGGGA+AGG | 0.472855 | 5.3:+4190915 | None:intergenic |
| AGGACACTCTCCGTTAATAT+CGG | 0.474742 | 5.3:+4190597 | None:intergenic |
| ACAAATGCAACTACACCGTA+TGG | 0.475606 | 5.3:-4190945 | MS.gene072806:CDS |
| TCTTGCGTTACTTGTACCAT+TGG | 0.482280 | 5.3:+4190858 | None:intergenic |
| TACAAGTAACGCAAGAATCT+GGG | 0.482336 | 5.3:-4190851 | MS.gene072806:CDS |
| AACTCAACACAGGTGAATCA+TGG | 0.485867 | 5.3:-4190894 | MS.gene072806:CDS |
| GGGGAAGGCTGCGGCCCATA+CGG | 0.488521 | 5.3:+4190930 | None:intergenic |
| GCGAAACATCATAGAAATCA+AGG | 0.493251 | 5.3:+4190692 | None:intergenic |
| TACACCACCAAACACAATCA+TGG | 0.514809 | 5.3:-4190740 | MS.gene072806:CDS |
| TATGATGTTTCGCTTGTACA+AGG | 0.516071 | 5.3:-4190682 | MS.gene072806:CDS |
| AACCAGCACATTCTCTTGTA+CGG | 0.516261 | 5.3:-4190386 | MS.gene072806:CDS |
| GTATGGGCCGCAGCCTTCCC+CGG | 0.524947 | 5.3:-4190928 | MS.gene072806:CDS |
| ACCACACGTGGCAGAGGCAT+TGG | 0.525682 | 5.3:+4190477 | None:intergenic |
| GGTCTCGGAAAGTGTCAAAC+CGG | 0.530011 | 5.3:-4190799 | MS.gene072806:CDS |
| TAGTGTTCCGTTACAATCAC+CGG | 0.530720 | 5.3:+4190780 | None:intergenic |
| AATATCGGCAGTACAATTAA+CGG | 0.535596 | 5.3:+4190612 | None:intergenic |
| ACCAGCACATTCTCTTGTAC+GGG | 0.539521 | 5.3:-4190385 | MS.gene072806:CDS |
| AATTCCATGATTGTGTTTGG+TGG | 0.543379 | 5.3:+4190736 | None:intergenic |
| TAGGGTAACTATAAGCATAA+GGG | 0.543431 | 5.3:+4190419 | None:intergenic |
| AGAGTGTCCTACTCCACTTA+AGG | 0.543641 | 5.3:-4190584 | MS.gene072806:CDS |
| CTATGAGAAGGAAGATTGAG+AGG | 0.547342 | 5.3:+4191016 | None:intergenic |
| TCCATAGCTGCAGCACAAGC+AGG | 0.551144 | 5.3:-4190985 | MS.gene072806:CDS |
| CCTACTCCACTTAAGGTACC+AGG | 0.555994 | 5.3:-4190577 | MS.gene072806:CDS |
| TGTTGGACCACACGTGGCAG+AGG | 0.556682 | 5.3:+4190471 | None:intergenic |
| GTTGTATCAAACGTAGTACA+AGG | 0.567408 | 5.3:+4190541 | None:intergenic |
| ACCAATGCCTCTGCCACGTG+TGG | 0.578890 | 5.3:-4190478 | MS.gene072806:CDS |
| CCTGGTACCTTAAGTGGAGT+AGG | 0.586418 | 5.3:+4190577 | None:intergenic |
| AAACCGTCTTTAAATTCCTG+TGG | 0.591625 | 5.3:-4190637 | MS.gene072806:CDS |
| TCCCGTACAAGAGAATGTGC+TGG | 0.600307 | 5.3:+4190384 | None:intergenic |
| CAAGGATTGTTACATCCACC+TGG | 0.601793 | 5.3:+4190559 | None:intergenic |
| CAAATGCAACTACACCGTAT+GGG | 0.615897 | 5.3:-4190944 | MS.gene072806:CDS |
| TGTCAAACCGGTGATTGTAA+CGG | 0.616265 | 5.3:-4190787 | MS.gene072806:CDS |
| AGTACAATTAACGGTACCAC+AGG | 0.617025 | 5.3:+4190621 | None:intergenic |
| GTACCACAGGAATTTAAAGA+CGG | 0.626605 | 5.3:+4190634 | None:intergenic |
| TGGAACATGAACATAACCAA+TGG | 0.633971 | 5.3:-4190874 | MS.gene072806:CDS |
| TGGATGTTATGGCTATGAGA+AGG | 0.634571 | 5.3:+4191004 | None:intergenic |
| AGCACATTCTCTTGTACGGG+AGG | 0.640577 | 5.3:-4190382 | MS.gene072806:CDS |
| ATAAGTTGTTGGACCACACG+TGG | 0.652976 | 5.3:+4190465 | None:intergenic |
| ACAAGTAACGCAAGAATCTG+GGG | 0.665144 | 5.3:-4190850 | MS.gene072806:CDS |
| TGAGTTTCATGCCACCGCCG+GGG | 0.679603 | 5.3:+4190911 | None:intergenic |
| TGGGCCGCAGCCTTCCCCGG+CGG | 0.703292 | 5.3:-4190925 | MS.gene072806:CDS |
| GGTGGCATGAAACTCAACAC+AGG | 0.727771 | 5.3:-4190904 | MS.gene072806:CDS |
| ACTCCACTTAAGGTACCAGG+TGG | 0.750912 | 5.3:-4190574 | MS.gene072806:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTATTCTAAGTTCTTTA+AGG | - | chr5.3:4190941-4190960 | MS.gene072806:CDS | 20.0% |
| ! | AAGAACTTAGAATAAGTTGT+TGG | + | chr5.3:4190939-4190958 | None:intergenic | 25.0% |
| !! | ATTCTAAGTTCTTTAAGGAT+AGG | - | chr5.3:4190946-4190965 | MS.gene072806:CDS | 25.0% |
| AATATCGGCAGTACAATTAA+CGG | + | chr5.3:4190781-4190800 | None:intergenic | 30.0% | |
| AATTGTACTGCCGATATTAA+CGG | - | chr5.3:4190783-4190802 | MS.gene072806:CDS | 30.0% | |
| TAGGGTAACTATAAGCATAA+GGG | + | chr5.3:4190974-4190993 | None:intergenic | 30.0% | |
| TTAGGGTAACTATAAGCATA+AGG | + | chr5.3:4190975-4190994 | None:intergenic | 30.0% | |
| !! | AAAGACGGTTTTAACAGAAT+TGG | + | chr5.3:4190744-4190763 | None:intergenic | 30.0% |
| AAACCGTCTTTAAATTCCTG+TGG | - | chr5.3:4190753-4190772 | MS.gene072806:CDS | 35.0% | |
| AATTCCATGATTGTGTTTGG+TGG | + | chr5.3:4190657-4190676 | None:intergenic | 35.0% | |
| AATTGCACTTTCGACAATTC+AGG | - | chr5.3:4190570-4190589 | MS.gene072806:CDS | 35.0% | |
| GCAAATTCCATGATTGTGTT+TGG | + | chr5.3:4190660-4190679 | None:intergenic | 35.0% | |
| GCGAAACATCATAGAAATCA+AGG | + | chr5.3:4190701-4190720 | None:intergenic | 35.0% | |
| GTACCACAGGAATTTAAAGA+CGG | + | chr5.3:4190759-4190778 | None:intergenic | 35.0% | |
| GTTGTATCAAACGTAGTACA+AGG | + | chr5.3:4190852-4190871 | None:intergenic | 35.0% | |
| TACAAGTAACGCAAGAATCT+GGG | - | chr5.3:4190539-4190558 | MS.gene072806:CDS | 35.0% | |
| TATGATGTTTCGCTTGTACA+AGG | - | chr5.3:4190708-4190727 | MS.gene072806:CDS | 35.0% | |
| TGGAACATGAACATAACCAA+TGG | - | chr5.3:4190516-4190535 | MS.gene072806:CDS | 35.0% | |
| ! | ACACTAGAGTGTCAAACAAT+AGG | - | chr5.3:4190627-4190646 | MS.gene072806:CDS | 35.0% |
| ! | TGAATTGTCGAAAGTGCAAT+TGG | + | chr5.3:4190571-4190590 | None:intergenic | 35.0% |
| !! | GAGGTTTGTTTTCATGATGA+TGG | + | chr5.3:4190358-4190377 | None:intergenic | 35.0% |
| AACCAGCACATTCTCTTGTA+CGG | - | chr5.3:4191004-4191023 | MS.gene072806:CDS | 40.0% | |
| AACTCAACACAGGTGAATCA+TGG | - | chr5.3:4190496-4190515 | MS.gene072806:CDS | 40.0% | |
| ACAAATGCAACTACACCGTA+TGG | - | chr5.3:4190445-4190464 | MS.gene072806:CDS | 40.0% | |
| ACAAGTAACGCAAGAATCTG+GGG | - | chr5.3:4190540-4190559 | MS.gene072806:CDS | 40.0% | |
| ACTTTCGACAATTCAGGTCT+CGG | - | chr5.3:4190576-4190595 | MS.gene072806:CDS | 40.0% | |
| AGGACACTCTCCGTTAATAT+CGG | + | chr5.3:4190796-4190815 | None:intergenic | 40.0% | |
| AGTACAATTAACGGTACCAC+AGG | + | chr5.3:4190772-4190791 | None:intergenic | 40.0% | |
| CAAATGCAACTACACCGTAT+GGG | - | chr5.3:4190446-4190465 | MS.gene072806:CDS | 40.0% | |
| CTATGAGAAGGAAGATTGAG+AGG | + | chr5.3:4190377-4190396 | None:intergenic | 40.0% | |
| GTACAAGTAACGCAAGAATC+TGG | - | chr5.3:4190538-4190557 | MS.gene072806:CDS | 40.0% | |
| TACACCACCAAACACAATCA+TGG | - | chr5.3:4190650-4190669 | MS.gene072806:CDS | 40.0% | |
| TAGTGTTCCGTTACAATCAC+CGG | + | chr5.3:4190613-4190632 | None:intergenic | 40.0% | |
| TCTTGCGTTACTTGTACCAT+TGG | + | chr5.3:4190535-4190554 | None:intergenic | 40.0% | |
| TGGATGTTATGGCTATGAGA+AGG | + | chr5.3:4190389-4190408 | None:intergenic | 40.0% | |
| TGTCAAACCGGTGATTGTAA+CGG | - | chr5.3:4190603-4190622 | MS.gene072806:CDS | 40.0% | |
| ! | TGCTGGTTGCATCATCTTTA+GGG | + | chr5.3:4190992-4191011 | None:intergenic | 40.0% |
| ACCAGCACATTCTCTTGTAC+GGG | - | chr5.3:4191005-4191024 | MS.gene072806:CDS | 45.0% | |
| ATAAGTTGTTGGACCACACG+TGG | + | chr5.3:4190928-4190947 | None:intergenic | 45.0% | |
| CAAGGATTGTTACATCCACC+TGG | + | chr5.3:4190834-4190853 | None:intergenic | 45.0% | |
| TGCTGCAGCTATGGATGTTA+TGG | + | chr5.3:4190400-4190419 | None:intergenic | 45.0% | |
| ! | AGAGTGTCCTACTCCACTTA+AGG | - | chr5.3:4190806-4190825 | MS.gene072806:CDS | 45.0% |
| !! | GTGCTGGTTGCATCATCTTT+AGG | + | chr5.3:4190993-4191012 | None:intergenic | 45.0% |
| AGCACATTCTCTTGTACGGG+AGG | - | chr5.3:4191008-4191027 | MS.gene072806:CDS | 50.0% | |
| CATCCACCTGGTACCTTAAG+TGG | + | chr5.3:4190822-4190841 | None:intergenic | 50.0% | |
| CCTGGTACCTTAAGTGGAGT+AGG | + | chr5.3:4190816-4190835 | None:intergenic | 50.0% | |
| GGTGGCATGAAACTCAACAC+AGG | - | chr5.3:4190486-4190505 | MS.gene072806:CDS | 50.0% | |
| TCCCGTACAAGAGAATGTGC+TGG | + | chr5.3:4191009-4191028 | None:intergenic | 50.0% | |
| ! | ACTCCACTTAAGGTACCAGG+TGG | - | chr5.3:4190816-4190835 | MS.gene072806:CDS | 50.0% |
| ! | CCTACTCCACTTAAGGTACC+AGG | - | chr5.3:4190813-4190832 | MS.gene072806:CDS | 50.0% |
| !! | GGTCTCGGAAAGTGTCAAAC+CGG | - | chr5.3:4190591-4190610 | MS.gene072806:CDS | 50.0% |
| GTTGAGTTTCATGCCACCGC+CGG | + | chr5.3:4190484-4190503 | None:intergenic | 55.0% | |
| TCCATAGCTGCAGCACAAGC+AGG | - | chr5.3:4190405-4190424 | MS.gene072806:CDS | 55.0% | |
| TCCTGCTTGTGCTGCAGCTA+TGG | + | chr5.3:4190409-4190428 | None:intergenic | 55.0% | |
| TTGAGTTTCATGCCACCGCC+GGG | + | chr5.3:4190483-4190502 | None:intergenic | 55.0% | |
| ACCAATGCCTCTGCCACGTG+TGG | - | chr5.3:4190912-4190931 | MS.gene072806:CDS | 60.0% | |
| TGAGTTTCATGCCACCGCCG+GGG | + | chr5.3:4190482-4190501 | None:intergenic | 60.0% | |
| TGTTGGACCACACGTGGCAG+AGG | + | chr5.3:4190922-4190941 | None:intergenic | 60.0% | |
| ! | ACCACACGTGGCAGAGGCAT+TGG | + | chr5.3:4190916-4190935 | None:intergenic | 60.0% |
| TTTCATGCCACCGCCGGGGA+AGG | + | chr5.3:4190478-4190497 | None:intergenic | 65.0% | |
| GGGGAAGGCTGCGGCCCATA+CGG | + | chr5.3:4190463-4190482 | None:intergenic | 70.0% | |
| GTATGGGCCGCAGCCTTCCC+CGG | - | chr5.3:4190462-4190481 | MS.gene072806:CDS | 70.0% | |
| ! | GCCACCGCCGGGGAAGGCTG+CGG | + | chr5.3:4190472-4190491 | None:intergenic | 80.0% |
| ! | TGGGCCGCAGCCTTCCCCGG+CGG | - | chr5.3:4190465-4190484 | MS.gene072806:CDS | 80.0% |
| ! | GCCGCAGCCTTCCCCGGCGG+TGG | - | chr5.3:4190468-4190487 | MS.gene072806:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 4190351 | 4191061 | 4190351 | ID=MS.gene072806 |
| chr5.3 | mRNA | 4190351 | 4191061 | 4190351 | ID=MS.gene072806.t1;Parent=MS.gene072806 |
| chr5.3 | exon | 4190351 | 4191061 | 4190351 | ID=MS.gene072806.t1.exon1;Parent=MS.gene072806.t1 |
| chr5.3 | CDS | 4190351 | 4191061 | 4190351 | ID=cds.MS.gene072806.t1;Parent=MS.gene072806.t1 |
| Gene Sequence |
| Protein sequence |
