AlfalfaGEDB | MS.gene41033

M. sativa cultivar XinJiangDaYe / MS.gene41033

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070647 GO:0071704 GO:0140096 GO:1901564
PFAM: PF04564.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41033.t1	RHN79432.1	96.1	440	13	2	1	440	1	436	7.50E-230	806.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41033.t1	Q9SVC6	54.3	446	184	7	1	438	1	434	4.4e-122	439.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41033.t1	A0A396JPS1	96.1	440	13	2	1	440	1	436	5.4e-230	806.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049281	MS.gene41033	0.823029	1.73E-53	-1.69E-46
MS.gene050381	MS.gene41033	0.834415	3.04E-56	-1.69E-46
MS.gene050883	MS.gene41033	0.81777	2.78E-52	-1.69E-46
MS.gene051044	MS.gene41033	0.85235	4.89E-61	-1.69E-46
MS.gene051127	MS.gene41033	0.832672	8.27E-56	-1.69E-46
MS.gene051138	MS.gene41033	0.82293	1.82E-53	-1.69E-46
MS.gene051946	MS.gene41033	0.812919	3.33E-51	-1.69E-46
MS.gene053420	MS.gene41033	0.810968	8.85E-51	-1.69E-46
MS.gene053561	MS.gene41033	0.805804	1.12E-49	-1.69E-46
MS.gene053887	MS.gene41033	0.804701	1.90E-49	-1.69E-46
MS.gene054056	MS.gene41033	0.800972	1.12E-48	-1.69E-46
MS.gene054959	MS.gene41033	0.804292	2.32E-49	-1.69E-46
MS.gene055139	MS.gene41033	0.805222	1.48E-49	-1.69E-46
MS.gene055154	MS.gene41033	0.804046	2.61E-49	-1.69E-46
MS.gene055942	MS.gene41033	0.805416	1.35E-49	-1.69E-46
MS.gene056311	MS.gene41033	0.802691	4.97E-49	-1.69E-46
MS.gene056313	MS.gene41033	0.800593	1.34E-48	-1.69E-46
MS.gene057014	MS.gene41033	0.815315	9.85E-52	-1.69E-46
MS.gene057291	MS.gene41033	0.807869	4.09E-50	-1.69E-46
MS.gene057293	MS.gene41033	0.815305	9.90E-52	-1.69E-46
MS.gene058099	MS.gene41033	0.83863	2.57E-57	-1.69E-46
MS.gene058171	MS.gene41033	0.825805	3.84E-54	-1.69E-46
MS.gene058173	MS.gene41033	0.814747	1.32E-51	-1.69E-46
MS.gene058175	MS.gene41033	0.823376	1.43E-53	-1.69E-46
MS.gene058628	MS.gene41033	0.803763	2.98E-49	-1.69E-46
MS.gene058629	MS.gene41033	0.804379	2.22E-49	-1.69E-46
MS.gene058630	MS.gene41033	0.81502	1.15E-51	-1.69E-46
MS.gene059045	MS.gene41033	0.801373	9.28E-49	-1.69E-46
MS.gene059690	MS.gene41033	0.836833	7.42E-57	-1.69E-46
MS.gene059691	MS.gene41033	0.823086	1.67E-53	-1.69E-46
MS.gene059694	MS.gene41033	0.84591	3.02E-59	-1.69E-46
MS.gene059697	MS.gene41033	0.848493	5.92E-60	-1.69E-46
MS.gene059916	MS.gene41033	0.801037	1.09E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene04998	MS.gene41033	PPI
MS.gene26139	MS.gene41033	PPI
MS.gene061543	MS.gene41033	PPI
MS.gene41033	MS.gene41211	PPI
MS.gene41036	MS.gene41033	PPI
MS.gene41033	MS.gene72611	PPI
MS.gene071765	MS.gene41033	PPI
MS.gene066125	MS.gene41033	PPI
MS.gene022190	MS.gene41033	PPI
MS.gene034756	MS.gene41033	PPI
MS.gene061546	MS.gene41033	PPI
MS.gene064492	MS.gene41033	PPI
MS.gene017373	MS.gene41033	PPI
MS.gene048677	MS.gene41033	PPI
MS.gene042912	MS.gene41033	PPI
MS.gene93972	MS.gene41033	PPI
MS.gene41035	MS.gene41033	PPI
MS.gene008306	MS.gene41033	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41033.t1	MTR_1g056880	95.465	441	16	2	1	441	1	437	0.0	852
MS.gene41033.t1	MTR_1g056870	93.651	441	24	2	1	441	1	437	0.0	819
MS.gene41033.t1	MTR_1g056840	88.662	441	20	3	1	441	1	411	0.0	768
MS.gene41033.t1	MTR_7g106340	65.455	440	128	7	1	438	1	418	0.0	553
MS.gene41033.t1	MTR_2g087350	54.483	435	164	5	4	438	3	403	3.26e-151	435
MS.gene41033.t1	MTR_1g056910	40.509	432	217	8	4	430	3	399	1.34e-102	311
MS.gene41033.t1	MTR_4g051515	37.188	441	238	8	4	437	3	411	8.65e-93	286
MS.gene41033.t1	MTR_3g065080	33.626	455	232	13	3	437	32	436	2.54e-59	200
MS.gene41033.t1	MTR_5g077510	34.169	439	234	16	4	429	32	428	5.58e-54	186
MS.gene41033.t1	MTR_5g048050	31.628	430	247	12	2	418	20	415	7.50e-52	181
MS.gene41033.t1	MTR_6g071340	30.952	420	245	11	11	418	9	395	5.90e-51	177
MS.gene41033.t1	MTR_4g085720	30.896	424	246	11	5	423	12	393	1.06e-44	160
MS.gene41033.t1	MTR_8g092870	27.828	442	273	12	5	431	8	418	1.81e-32	127
MS.gene41033.t1	MTR_3g095730	27.765	443	270	12	5	431	11	419	3.78e-29	118
MS.gene41033.t1	MTR_4g063800	25.408	429	262	13	11	430	259	638	1.04e-26	113
MS.gene41033.t1	MTR_7g059405	26.716	408	255	13	11	418	268	631	8.68e-26	110
MS.gene41033.t1	MTR_3g096370	26.573	429	268	15	4	423	7	397	4.99e-25	106
MS.gene41033.t1	MTR_4g485520	27.950	322	164	10	11	315	109	379	8.71e-25	106
MS.gene41033.t1	MTR_4g485520	27.950	322	164	10	11	315	277	547	1.12e-24	107
MS.gene41033.t1	MTR_2g018010	25.231	432	250	14	11	421	296	675	2.48e-23	103
MS.gene41033.t1	MTR_5g015210	25.653	421	265	9	6	426	66	438	6.03e-23	101
MS.gene41033.t1	MTR_7g078330	30.216	278	167	10	11	274	278	542	7.05e-23	102
MS.gene41033.t1	MTR_4g107010	28.266	421	247	18	11	418	284	662	3.06e-22	100
MS.gene41033.t1	MTR_5g083030	26.667	360	187	13	11	342	297	607	5.90e-21	96.3
MS.gene41033.t1	MTR_1g094215	28.739	341	182	13	11	339	68	359	3.60e-20	92.8
MS.gene41033.t1	MTR_1g094215	28.739	341	182	13	11	339	251	542	9.49e-20	92.4
MS.gene41033.t1	MTR_3g085610	25.658	456	271	17	13	427	286	714	6.24e-19	90.1
MS.gene41033.t1	MTR_5g034440	25.728	412	270	14	11	418	284	663	7.99e-19	89.7
MS.gene41033.t1	MTR_3g078160	26.139	417	259	15	11	418	279	655	1.04e-18	89.4
MS.gene41033.t1	MTR_3g078160	26.139	417	259	15	11	418	279	655	1.32e-18	89.0
MS.gene41033.t1	MTR_4g091880	27.007	411	243	15	11	418	9	365	2.98e-18	86.3
MS.gene41033.t1	MTR_8g080280	27.716	451	250	22	13	418	288	707	7.49e-18	86.7
MS.gene41033.t1	MTR_4g028960	34.197	193	89	8	2	169	273	452	2.30e-17	85.1
MS.gene41033.t1	MTR_7g097020	45.679	81	37	2	5	85	239	312	1.39e-16	82.8
MS.gene41033.t1	MTR_1g069845	47.945	73	31	2	9	81	126	191	5.65e-16	80.5
MS.gene41033.t1	MTR_7g053260	42.500	80	39	2	1	80	72	144	8.10e-16	79.7
MS.gene41033.t1	MTR_7g116600	45.745	94	40	4	11	104	82	164	8.89e-16	79.7
MS.gene41033.t1	MTR_1g069845	45.455	77	35	2	5	81	243	312	9.73e-16	80.1
MS.gene41033.t1	MTR_1g069845	45.455	77	35	2	5	81	239	308	1.02e-15	80.1
MS.gene41033.t1	MTR_4g091880	25.061	411	223	15	11	418	9	337	1.44e-15	78.2
MS.gene41033.t1	MTR_1g017770	50.649	77	30	3	5	80	42	111	5.85e-15	77.0
MS.gene41033.t1	MTR_3g115670	26.291	213	119	6	11	207	34	224	7.91e-15	77.4
MS.gene41033.t1	MTR_8g077205	44.086	93	39	4	5	95	159	240	1.22e-14	76.6
MS.gene41033.t1	MTR_8g077205	44.086	93	39	4	5	95	271	352	1.61e-14	76.3
MS.gene41033.t1	MTR_3g078160	46.154	91	41	3	11	100	279	362	5.42e-14	74.3
MS.gene41033.t1	MTR_2g011140	25.786	318	192	8	13	330	21	294	7.91e-14	73.2
MS.gene41033.t1	MTR_5g020570	42.857	98	41	6	1	95	265	350	1.76e-13	73.2
MS.gene41033.t1	MTR_5g020570	42.857	98	41	6	1	95	280	365	2.08e-13	72.8
MS.gene41033.t1	MTR_8g103227	39.326	89	40	3	11	99	399	473	6.00e-13	71.6
MS.gene41033.t1	MTR_3g466220	41.667	84	42	2	2	85	228	304	6.87e-13	71.2
MS.gene41033.t1	MTR_3g466220	41.667	84	42	2	2	85	207	283	7.55e-13	71.2
MS.gene41033.t1	MTR_1g090320	43.243	74	36	2	11	84	517	584	1.58e-12	70.5
MS.gene41033.t1	MTR_1g079450	39.560	91	44	4	5	95	61	140	1.60e-12	69.3
MS.gene41033.t1	MTR_1g090320	43.243	74	36	2	11	84	519	586	1.66e-12	70.5
MS.gene41033.t1	MTR_7g117890	41.667	84	42	2	2	85	250	326	5.85e-12	68.6
MS.gene41033.t1	MTR_2g096850	37.500	80	43	2	1	80	583	655	6.55e-11	64.7
MS.gene41033.t1	MTR_2g096850	37.500	80	43	2	1	80	734	806	8.32e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41033.t1	AT3G52450	54.054	444	188	6	1	438	1	434	1.15e-157	453
MS.gene41033.t1	AT2G35930	50.452	442	178	5	1	438	6	410	3.44e-154	443
MS.gene41033.t1	AT3G11840	35.181	469	238	9	3	435	6	444	8.66e-79	252
MS.gene41033.t1	AT3G19380	32.843	408	228	9	1	400	8	377	3.87e-49	173
MS.gene41033.t1	AT5G37490	30.415	434	255	14	4	429	28	422	2.87e-47	168
MS.gene41033.t1	AT1G49780	31.151	443	258	11	1	432	8	414	1.44e-43	158
MS.gene41033.t1	AT1G66160	30.679	427	243	15	2	421	26	406	2.72e-42	155
MS.gene41033.t1	AT1G66160	28.132	423	237	15	4	421	30	390	1.29e-29	119
MS.gene41033.t1	AT2G28830	28.774	424	259	19	2	421	178	562	3.22e-28	117
MS.gene41033.t1	AT1G23030	26.794	418	248	14	11	422	245	610	5.02e-28	117
MS.gene41033.t1	AT5G09800	28.929	439	252	15	10	431	14	409	5.87e-28	115
MS.gene41033.t1	AT3G18710	27.088	443	270	11	5	431	10	415	6.46e-26	109
MS.gene41033.t1	AT3G46510	26.777	422	265	16	2	421	250	629	1.88e-24	106
MS.gene41033.t1	AT3G54850	29.677	310	183	12	7	316	248	522	4.15e-24	105
MS.gene41033.t1	AT1G71020	27.273	429	241	15	11	422	99	473	6.39e-24	104
MS.gene41033.t1	AT5G42340	29.392	296	166	8	11	306	294	546	7.93e-24	104
MS.gene41033.t1	AT1G71020	27.273	429	241	15	11	422	247	621	9.05e-24	104
MS.gene41033.t1	AT5G64660	25.951	447	277	14	5	431	8	420	9.64e-23	100
MS.gene41033.t1	AT3G49810	24.466	421	270	9	6	426	63	435	2.26e-21	96.7
MS.gene41033.t1	AT1G29340	26.267	434	254	15	5	421	303	687	3.23e-21	97.1
MS.gene41033.t1	AT5G65920	23.990	421	272	11	6	426	59	431	8.41e-21	94.7
MS.gene41033.t1	AT5G65920	23.990	421	272	11	6	426	59	431	8.41e-21	94.7
MS.gene41033.t1	AT1G67530	26.770	452	260	14	13	418	278	704	3.27e-20	94.0
MS.gene41033.t1	AT1G67530	26.770	452	260	14	13	418	278	704	3.27e-20	94.0
MS.gene41033.t1	AT1G67530	26.770	452	260	14	13	418	278	704	3.27e-20	94.0
MS.gene41033.t1	AT5G01830	26.837	313	177	10	4	308	271	539	5.85e-19	90.1
MS.gene41033.t1	AT1G24330	25.225	444	273	17	13	418	281	703	9.41e-18	86.3
MS.gene41033.t1	AT1G24330	25.225	444	273	17	13	418	281	703	9.41e-18	86.3
MS.gene41033.t1	AT1G67530	48.352	91	35	4	13	103	278	356	1.66e-17	85.1
MS.gene41033.t1	AT1G10560	26.582	316	177	11	11	313	292	565	1.88e-17	85.5
MS.gene41033.t1	AT1G27910	42.857	105	49	4	13	117	285	378	4.29e-17	84.3
MS.gene41033.t1	AT4G21350	25.816	337	193	11	11	342	9	293	2.35e-16	80.9
MS.gene41033.t1	AT3G54790	43.750	80	38	2	5	84	200	272	1.64e-14	76.3
MS.gene41033.t1	AT3G54790	43.750	80	38	2	5	84	236	308	2.08e-14	75.9
MS.gene41033.t1	AT3G54790	43.750	80	38	2	5	84	236	308	2.08e-14	75.9
MS.gene41033.t1	AT3G07360	48.000	75	32	2	11	85	78	145	2.09e-14	75.5
MS.gene41033.t1	AT2G23140	38.776	98	49	3	11	108	237	323	2.45e-13	72.8
MS.gene41033.t1	AT2G23140	38.776	98	49	3	11	108	45	131	2.49e-13	72.4
MS.gene41033.t1	AT2G23140	38.776	98	49	3	11	108	45	131	2.49e-13	72.4
MS.gene41033.t1	AT2G23140	38.776	98	49	3	11	108	234	320	2.51e-13	72.8
MS.gene41033.t1	AT2G23140	38.776	98	49	3	11	108	234	320	2.51e-13	72.8
MS.gene41033.t1	AT3G02840	23.782	349	221	10	83	417	34	351	5.94e-13	70.5
MS.gene41033.t1	AT1G60190	24.167	360	208	12	13	354	284	596	7.04e-13	71.2
MS.gene41033.t1	AT1G01660	39.474	76	39	2	10	85	500	568	1.67e-12	69.7
MS.gene41033.t1	AT1G01660	39.474	76	39	2	10	85	501	569	1.69e-12	69.7
MS.gene41033.t1	AT2G45920	40.244	82	42	2	6	87	324	398	8.65e-12	67.0
MS.gene41033.t1	AT1G01680	40.260	77	39	2	11	87	237	306	1.67e-11	65.5
MS.gene41033.t1	AT5G67340	32.283	127	74	4	5	128	238	355	3.85e-11	65.9
MS.gene41033.t1	AT5G67340	32.283	127	74	4	5	128	238	355	3.85e-11	65.9
MS.gene41033.t1	AT5G18340	35.833	120	58	5	5	117	72	179	6.15e-11	64.7
MS.gene41033.t1	AT1G68940	28.188	149	81	3	11	156	303	428	7.35e-11	65.1
MS.gene41033.t1	AT1G68940	28.188	149	81	3	11	156	303	428	8.16e-11	65.1
MS.gene41033.t1	AT1G68940	28.188	149	81	3	11	156	250	375	8.77e-11	64.7

Find 47 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAATCCAACTTGTCGAATT+TGG	0.159621	1.3:+41714911	MS.gene41033:CDS
TCTAGTTGATAGTGGAAATA+AGG	0.254542	1.3:+41715252	MS.gene41033:CDS
TTCATGAGTTGTAGTGAAAT+AGG	0.280796	1.3:-41714092	None:intergenic
TGCACCATGAATTCTTCTTA+TGG	0.299615	1.3:+41714293	MS.gene41033:CDS
AAAGCCATGTGAAATGATTT+TGG	0.300149	1.3:+41715009	MS.gene41033:CDS
TATGAAGCAAGTAAATTAAA+AGG	0.308972	1.3:-41715340	None:intergenic
TTAATGAGATTATTGCAAAA+AGG	0.315692	1.3:+41714725	MS.gene41033:CDS
TTTAGATTGGCTAGCTTTGA+TGG	0.320082	1.3:-41714809	None:intergenic
TTAAATTGCATTCAAAGTCT+TGG	0.383883	1.3:+41715299	MS.gene41033:CDS
ATGCCTGTTGAGACAGTAAC+TGG	0.387709	1.3:-41714119	None:intergenic
GATTCCATAAGAAGAATTCA+TGG	0.398042	1.3:-41714297	None:intergenic
TTCTTCCAAATTCGACAAGT+TGG	0.411196	1.3:-41714916	None:intergenic
AGAGTAAAAGCAATTGAATC+AGG	0.420580	1.3:+41714941	MS.gene41033:CDS
TGTTGTTGCAAAGCTTTGTT+TGG	0.427050	1.3:+41715225	MS.gene41033:CDS
TCATGAGTTGTAGTGAAATA+GGG	0.428583	1.3:-41714091	None:intergenic
AAGAATCAGAAGCTTCTTTG+AGG	0.432362	1.3:-41714373	None:intergenic
TTTGATGATGATGATGTTGA+AGG	0.466030	1.3:+41714578	MS.gene41033:CDS
GATCCAGTTACTGTCTCAAC+AGG	0.466859	1.3:+41714116	MS.gene41033:CDS
GTTCAAGAAATGTTACGAAT+TGG	0.471240	1.3:+41715202	MS.gene41033:CDS
AATTCATGGTGCACCATGCT+TGG	0.475436	1.3:-41714283	None:intergenic
TTGGTTCTTCTAGTTGATAG+TGG	0.500755	1.3:+41715244	MS.gene41033:CDS
AGTCTACGAAGAGTGTGGTT+TGG	0.516469	1.3:-41714257	None:intergenic
AAATCGACGGTGTATTGAAT+CGG	0.519925	1.3:+41714463	MS.gene41033:CDS
ATGTTATGTCAATGTGCTGA+TGG	0.528834	1.3:+41715043	MS.gene41033:CDS
AGGGTTTGGATAAGTAAATG+AGG	0.542957	1.3:-41714404	None:intergenic
GCTTCATACCCAACAACTAG+TGG	0.543682	1.3:+41715355	MS.gene41033:CDS
GAACTCTTAAGCCATGGATG+TGG	0.556866	1.3:+41715073	MS.gene41033:CDS
ATAAGGCAAAGGAGAAAGCA+AGG	0.557452	1.3:+41715269	MS.gene41033:CDS
CTGATAATTGAAGATTGTAA+AGG	0.558747	1.3:-41714649	None:intergenic
ATTCTTCTTATGGAATCGAA+AGG	0.560631	1.3:+41714303	MS.gene41033:CDS
AGATTTGAACTCTTAAGCCA+TGG	0.566041	1.3:+41715067	MS.gene41033:CDS
TTCGATGCTTTCTCTGTCGT+AGG	0.572900	1.3:-41714144	None:intergenic
TTCATCTTCATGTTCAACAA+CGG	0.581699	1.3:+41714538	MS.gene41033:CDS
TATTTCACTACAACTCATGA+AGG	0.582520	1.3:+41714094	MS.gene41033:CDS
TGATAGTGGAAATAAGGCAA+AGG	0.584798	1.3:+41715258	MS.gene41033:CDS
AGCACCAAAATCATTTCACA+TGG	0.599883	1.3:-41715013	None:intergenic
AATCTTCAATTATCAGAACA+AGG	0.603602	1.3:+41714656	MS.gene41033:CDS
CGACGGTGTATTGAATCGGC+CGG	0.609765	1.3:+41714467	MS.gene41033:CDS
CAATAGCTAAACCACATCCA+TGG	0.618916	1.3:-41715084	None:intergenic
TTCGTAGACTCATCCAAGCA+TGG	0.622209	1.3:+41714270	MS.gene41033:CDS
CCGTCGATTTGACTCACTCT+CGG	0.622821	1.3:-41714450	None:intergenic
CTTCATACCCAACAACTAGT+GGG	0.626704	1.3:+41715356	MS.gene41033:CDS
TAAGGCAAAGGAGAAAGCAA+GGG	0.629025	1.3:+41715270	MS.gene41033:CDS
TGCTAAGAACTCGACTGCAC+CGG	0.636230	1.3:-41714486	None:intergenic
GGATGAGTCTACGAAGAGTG+TGG	0.646535	1.3:-41714262	None:intergenic
CCGAGAGTGAGTCAAATCGA+CGG	0.693824	1.3:+41714450	MS.gene41033:CDS
TGGCTAATGATAGAGCTGTG+AGG	0.767301	1.3:+41715137	MS.gene41033:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATGAAGCAAGTAAATTAAA+AGG	-	chr1.3:41715343-41715362	None:intergenic	20.0%
!!	TTAATGAGATTATTGCAAAA+AGG	+	chr1.3:41714725-41714744	MS.gene41033:CDS	20.0%
!!!	AATTGTTTTGAGCTTTTTTA+GGG	-	chr1.3:41714426-41714445	None:intergenic	20.0%
!	AATCTTCAATTATCAGAACA+AGG	+	chr1.3:41714656-41714675	MS.gene41033:CDS	25.0%
!	ACTCTCTTAAACTTCAAAAA+TGG	+	chr1.3:41714686-41714705	MS.gene41033:CDS	25.0%
!	CTGATAATTGAAGATTGTAA+AGG	-	chr1.3:41714652-41714671	None:intergenic	25.0%
!	TTAAATTGCATTCAAAGTCT+TGG	+	chr1.3:41715299-41715318	MS.gene41033:CDS	25.0%
!!	TGTTTCAAAGAAGATTTTGA+GGG	+	chr1.3:41715105-41715124	MS.gene41033:CDS	25.0%
!!	TTGTTTCAAAGAAGATTTTG+AGG	+	chr1.3:41715104-41715123	MS.gene41033:CDS	25.0%
!!!	CAATTGTTTTGAGCTTTTTT+AGG	-	chr1.3:41714427-41714446	None:intergenic	25.0%
!!!	TTTGCTTTTGACTTCAAAAT+AGG	+	chr1.3:41714602-41714621	MS.gene41033:CDS	25.0%
	AGAGTAAAAGCAATTGAATC+AGG	+	chr1.3:41714941-41714960	MS.gene41033:CDS	30.0%
	ATTCTTCTTATGGAATCGAA+AGG	+	chr1.3:41714303-41714322	MS.gene41033:CDS	30.0%
	GAAAAACTCGATCTTTAGAT+TGG	-	chr1.3:41714825-41714844	None:intergenic	30.0%
	GAAATAGGGCAAAGAAAAAA+TGG	-	chr1.3:41714080-41714099	None:intergenic	30.0%
	GATTCCATAAGAAGAATTCA+TGG	-	chr1.3:41714300-41714319	None:intergenic	30.0%
	GTTCAAGAAATGTTACGAAT+TGG	+	chr1.3:41715202-41715221	MS.gene41033:CDS	30.0%
	TATTTCACTACAACTCATGA+AGG	+	chr1.3:41714094-41714113	MS.gene41033:CDS	30.0%
	TCATGAGTTGTAGTGAAATA+GGG	-	chr1.3:41714094-41714113	None:intergenic	30.0%
	TTAATCCAACTTGTCGAATT+TGG	+	chr1.3:41714911-41714930	MS.gene41033:CDS	30.0%
	TTCATCTTCATGTTCAACAA+CGG	+	chr1.3:41714538-41714557	MS.gene41033:CDS	30.0%
	TTCATGAGTTGTAGTGAAAT+AGG	-	chr1.3:41714095-41714114	None:intergenic	30.0%
!	AAAGCCATGTGAAATGATTT+TGG	+	chr1.3:41715009-41715028	MS.gene41033:CDS	30.0%
!!	TCTAGTTGATAGTGGAAATA+AGG	+	chr1.3:41715252-41715271	MS.gene41033:CDS	30.0%
!!	TTTGAGGAGTTTTTCAATGA+GGG	-	chr1.3:41714360-41714379	None:intergenic	30.0%
!!	TTTGATGATGATGATGTTGA+AGG	+	chr1.3:41714578-41714597	MS.gene41033:CDS	30.0%
!!!	TGAAATGATTTTGGTGCTTT+TGG	+	chr1.3:41715018-41715037	MS.gene41033:CDS	30.0%
!!!	TTTTGAGCTTTTTTAGGGTT+TGG	-	chr1.3:41714421-41714440	None:intergenic	30.0%
	AAATCGACGGTGTATTGAAT+CGG	+	chr1.3:41714463-41714482	MS.gene41033:CDS	35.0%
	AAGAATCAGAAGCTTCTTTG+AGG	-	chr1.3:41714376-41714395	None:intergenic	35.0%
	AGATTTGAACTCTTAAGCCA+TGG	+	chr1.3:41715067-41715086	MS.gene41033:CDS	35.0%
	AGCACCAAAATCATTTCACA+TGG	-	chr1.3:41715016-41715035	None:intergenic	35.0%
	AGGGTTTGGATAAGTAAATG+AGG	-	chr1.3:41714407-41714426	None:intergenic	35.0%
	ATGTTATGTCAATGTGCTGA+TGG	+	chr1.3:41715043-41715062	MS.gene41033:CDS	35.0%
	TGCACCATGAATTCTTCTTA+TGG	+	chr1.3:41714293-41714312	MS.gene41033:CDS	35.0%
	TTCTTCCAAATTCGACAAGT+TGG	-	chr1.3:41714919-41714938	None:intergenic	35.0%
!	CGAAAAATGGCTCTTTTCAT+CGG	+	chr1.3:41714163-41714182	MS.gene41033:CDS	35.0%
!!	ACAGAGAAAGCATCGAAAAA+TGG	+	chr1.3:41714150-41714169	MS.gene41033:CDS	35.0%
!!	CTTTGAGGAGTTTTTCAATG+AGG	-	chr1.3:41714361-41714380	None:intergenic	35.0%
!!	GATTTTGAGGGTTTCAACAA+TGG	+	chr1.3:41715117-41715136	MS.gene41033:CDS	35.0%
!!	TCAATGAGGGTTTTTGTTGT+TGG	-	chr1.3:41714347-41714366	None:intergenic	35.0%
!!	TGATAGTGGAAATAAGGCAA+AGG	+	chr1.3:41715258-41715277	MS.gene41033:CDS	35.0%
!!	TGTTGTTGCAAAGCTTTGTT+TGG	+	chr1.3:41715225-41715244	MS.gene41033:CDS	35.0%
!!	TTGGTTCTTCTAGTTGATAG+TGG	+	chr1.3:41715244-41715263	MS.gene41033:CDS	35.0%
!!	TTTAGATTGGCTAGCTTTGA+TGG	-	chr1.3:41714812-41714831	None:intergenic	35.0%
!!!	GTTTTTGTTGTTGGAGGTTT+TGG	-	chr1.3:41714338-41714357	None:intergenic	35.0%
	ATAAGGCAAAGGAGAAAGCA+AGG	+	chr1.3:41715269-41715288	MS.gene41033:CDS	40.0%
	CAATAGCTAAACCACATCCA+TGG	-	chr1.3:41715087-41715106	None:intergenic	40.0%
	CTTCATACCCAACAACTAGT+GGG	+	chr1.3:41715356-41715375	MS.gene41033:CDS	40.0%
	TAAGGCAAAGGAGAAAGCAA+GGG	+	chr1.3:41715270-41715289	MS.gene41033:CDS	40.0%
!!!	ATGAGGGTTTTTGTTGTTGG+AGG	-	chr1.3:41714344-41714363	None:intergenic	40.0%
!!!	GTGAGTTGTTGTTTTGTGAC+AGG	-	chr1.3:41714203-41714222	None:intergenic	40.0%
	AATTCATGGTGCACCATGCT+TGG	-	chr1.3:41714286-41714305	None:intergenic	45.0%
	ATGCCTGTTGAGACAGTAAC+TGG	-	chr1.3:41714122-41714141	None:intergenic	45.0%
	GAACTCTTAAGCCATGGATG+TGG	+	chr1.3:41715073-41715092	MS.gene41033:CDS	45.0%
	GATCCAGTTACTGTCTCAAC+AGG	+	chr1.3:41714116-41714135	MS.gene41033:CDS	45.0%
	GCTTCATACCCAACAACTAG+TGG	+	chr1.3:41715355-41715374	MS.gene41033:CDS	45.0%
	TGGCTAATGATAGAGCTGTG+AGG	+	chr1.3:41715137-41715156	MS.gene41033:CDS	45.0%
	TTCGATGCTTTCTCTGTCGT+AGG	-	chr1.3:41714147-41714166	None:intergenic	45.0%
	TTCGTAGACTCATCCAAGCA+TGG	+	chr1.3:41714270-41714289	MS.gene41033:CDS	45.0%
!	AGTCTACGAAGAGTGTGGTT+TGG	-	chr1.3:41714260-41714279	None:intergenic	45.0%
!!!	GTTGTTGGAGGTTTTGGAGT+TGG	-	chr1.3:41714332-41714351	None:intergenic	45.0%
	CCGAGAGTGAGTCAAATCGA+CGG	+	chr1.3:41714450-41714469	MS.gene41033:CDS	50.0%
	GGATGAGTCTACGAAGAGTG+TGG	-	chr1.3:41714265-41714284	None:intergenic	50.0%
	TGCTAAGAACTCGACTGCAC+CGG	-	chr1.3:41714489-41714508	None:intergenic	50.0%
!!	CCGTCGATTTGACTCACTCT+CGG	-	chr1.3:41714453-41714472	None:intergenic	50.0%
	CGACGGTGTATTGAATCGGC+CGG	+	chr1.3:41714467-41714486	MS.gene41033:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	41714053	41715381	41714053	ID=MS.gene41033
chr1.3	mRNA	41714053	41715381	41714053	ID=MS.gene41033.t1;Parent=MS.gene41033
chr1.3	exon	41714053	41715381	41714053	ID=MS.gene41033.t1.exon1;Parent=MS.gene41033.t1
chr1.3	CDS	41714053	41715381	41714053	ID=cds.MS.gene41033.t1;Parent=MS.gene41033.t1

Gene Sequence

>MS.gene41033

ATGAATCAAGATATCGAAGTTACACCATTTTTTCTTTGCCCTATTTCACTACAACTCATGAAGGATCCAGTTACTGTCTCAACAGGCATAACCTACGACAGAGAAAGCATCGAAAAATGGCTCTTTTCATCGGAAAACAAAACATGTCCTGTCACAAAACAACAACTCACACATGATGATGCAAATGATCTCATTATTCTCACTCCAAACCACACTCTTCGTAGACTCATCCAAGCATGGTGCACCATGAATTCTTCTTATGGAATCGAAAGGATTCCAACTCCAAAACCTCCAACAACAAAAACCCTCATTGAAAAACTCCTCAAAGAAGCTTCTGATTCTTCAGATTCACCTCATTTACTTATCCAAACCCTAAAAAAGCTCAAAACAATTGCATCCGAGAGTGAGTCAAATCGACGGTGTATTGAATCGGCCGGTGCAGTCGAGTTCTTAGCATCAATAGTTACAAAAAACAACACAAGTTGTTCATCTTCATGTTCAACAACGGAATTAATTGAAGCTAGCTTTGATGATGATGATGTTGAAGGTTTTGCTTTTGACTTCAAAATAGGTGCAGAAGATGAAGCTATAAACATCCTTTACAATCTTCAATTATCAGAACAAGGTTTGAAAACTCTCTTAAACTTCAAAAATGGAGAATTTTTAGACTCTTTAATGAGATTATTGCAAAAAGGTAACTATGATTCAAGAACATACGCAATCTTTCTGTTGAAATCTATGTCAAAAGTAGCTGATCCATCAAAGCTAGCCAATCTAAAGATCGAGTTTTTCGTCGAGTTAGTTCAACTTCTCAAAGATCAGATATCAAAGAAAGCATCAAAAGCAACGCTACAAACGTTAATCCAACTTGTCGAATTTGGAAGAAATAGAGTAAAAGCAATTGAATCAGGTTGTGTTTCTGCTTTGATAGAACTTCTTCTTGATTGCAAAGAAAGAAAGCCATGTGAAATGATTTTGGTGCTTTTGGAGATGTTATGTCAATGTGCTGATGGAAGATTTGAACTCTTAAGCCATGGATGTGGTTTAGCTATTGTTTCAAAGAAGATTTTGAGGGTTTCAACAATGGCTAATGATAGAGCTGTGAGGATTCTTCTTTCTGTTTCAAGATTTTCTGCTACACATTTTGTTGTTCAAGAAATGTTACGAATTGGTGTTGTTGCAAAGCTTTGTTTGGTTCTTCTAGTTGATAGTGGAAATAAGGCAAAGGAGAAAGCAAGGGAGATTCTTAAATTGCATTCAAAGTCTTGGATGAATTCTCATTGCATACCTTTTAATTTACTTGCTTCATACCCAACAACTAGTGGGTGA

Protein sequence

>MS.gene41033.t1

MNQDIEVTPFFLCPISLQLMKDPVTVSTGITYDRESIEKWLFSSENKTCPVTKQQLTHDDANDLIILTPNHTLRRLIQAWCTMNSSYGIERIPTPKPPTTKTLIEKLLKEASDSSDSPHLLIQTLKKLKTIASESESNRRCIESAGAVEFLASIVTKNNTSCSSSCSTTELIEASFDDDDVEGFAFDFKIGAEDEAINILYNLQLSEQGLKTLLNFKNGEFLDSLMRLLQKGNYDSRTYAIFLLKSMSKVADPSKLANLKIEFFVELVQLLKDQISKKASKATLQTLIQLVEFGRNRVKAIESGCVSALIELLLDCKERKPCEMILVLLEMLCQCADGRFELLSHGCGLAIVSKKILRVSTMANDRAVRILLSVSRFSATHFVVQEMLRIGVVAKLCLVLLVDSGNKAKEKAREILKLHSKSWMNSHCIPFNLLASYPTTSG