Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07004.t1 | XP_013450373.1 | 96.8 | 532 | 17 | 0 | 1 | 532 | 1 | 532 | 2.30E-297 | 1030.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07004.t1 | Q8RXK7 | 64.1 | 510 | 169 | 5 | 37 | 532 | 30 | 539 | 2.2e-184 | 646.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07004.t1 | A0A072U4Y4 | 96.8 | 532 | 17 | 0 | 1 | 532 | 1 | 532 | 1.7e-297 | 1030.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene07004 | -0.836441 | 9.34E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene07004 | 0.867151 | 1.69E-65 | -1.69E-46 |
| MS.gene049312 | MS.gene07004 | 0.818452 | 1.95E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene07004 | -0.816923 | 4.31E-52 | -1.69E-46 |
| MS.gene049710 | MS.gene07004 | 0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene07004 | -0.811957 | 5.40E-51 | -1.69E-46 |
| MS.gene050363 | MS.gene07004 | 0.823583 | 1.28E-53 | -1.69E-46 |
| MS.gene050380 | MS.gene07004 | 0.805407 | 1.35E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene07004 | 0.890174 | 1.25E-73 | -1.69E-46 |
| MS.gene050479 | MS.gene07004 | 0.843748 | 1.16E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene07004 | -0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene07004 | -0.842589 | 2.36E-58 | -1.69E-46 |
| MS.gene050547 | MS.gene07004 | 0.83684 | 7.39E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene07004 | -0.824935 | 6.16E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene07004 | -0.829242 | 5.74E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene07004 | -0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene050833 | MS.gene07004 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene07004 | -0.822504 | 2.29E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene07004 | -0.820755 | 5.80E-53 | -1.69E-46 |
| MS.gene050883 | MS.gene07004 | 0.892558 | 1.42E-74 | -1.69E-46 |
| MS.gene050986 | MS.gene07004 | -0.801746 | 7.79E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene07004 | 0.854062 | 1.58E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene07004 | 0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene07004 | 0.863177 | 3.00E-64 | -1.69E-46 |
| MS.gene051138 | MS.gene07004 | 0.832317 | 1.01E-55 | -1.69E-46 |
| MS.gene051364 | MS.gene07004 | 0.84379 | 1.13E-58 | -1.69E-46 |
| MS.gene051366 | MS.gene07004 | 0.82724 | 1.74E-54 | -1.69E-46 |
| MS.gene051367 | MS.gene07004 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene07004 | 0.846646 | 1.91E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene07004 | -0.819665 | 1.03E-52 | -1.69E-46 |
| MS.gene052211 | MS.gene07004 | 0.815736 | 7.94E-52 | -1.69E-46 |
| MS.gene052329 | MS.gene07004 | 0.82569 | 4.09E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene07004 | -0.824486 | 7.86E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene07004 | -0.821243 | 4.48E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene07004 | -0.819009 | 1.45E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene07004 | 0.851782 | 7.09E-61 | -1.69E-46 |
| MS.gene053488 | MS.gene07004 | 0.807538 | 4.81E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene07004 | 0.827636 | 1.40E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene07004 | 0.831952 | 1.25E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene07004 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene07004 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene07004 | -0.802209 | 6.25E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene07004 | 0.804567 | 2.03E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene07004 | 0.830366 | 3.06E-55 | -1.69E-46 |
| MS.gene054707 | MS.gene07004 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene07004 | 0.827323 | 1.67E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene07004 | -0.842822 | 2.05E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene07004 | -0.812101 | 5.02E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene07004 | 0.850586 | 1.54E-60 | -1.69E-46 |
| MS.gene055124 | MS.gene07004 | 0.843191 | 1.63E-58 | -1.69E-46 |
| MS.gene055139 | MS.gene07004 | 0.813231 | 2.84E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene07004 | 0.869869 | 2.24E-66 | -1.69E-46 |
| MS.gene055202 | MS.gene07004 | 0.820006 | 8.62E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene07004 | -0.818249 | 2.16E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene07004 | -0.846616 | 1.94E-59 | -1.69E-46 |
| MS.gene055549 | MS.gene07004 | 0.812315 | 4.51E-51 | -1.69E-46 |
| MS.gene055550 | MS.gene07004 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene07004 | -0.822698 | 2.06E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene07004 | -0.800504 | 1.40E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene07004 | -0.834066 | 3.71E-56 | -1.69E-46 |
| MS.gene055961 | MS.gene07004 | 0.814795 | 1.28E-51 | -1.69E-46 |
| MS.gene055977 | MS.gene07004 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene056218 | MS.gene07004 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene07004 | 0.864012 | 1.65E-64 | -1.69E-46 |
| MS.gene056311 | MS.gene07004 | 0.87358 | 1.32E-67 | -1.69E-46 |
| MS.gene056313 | MS.gene07004 | 0.844996 | 5.35E-59 | -1.69E-46 |
| MS.gene056408 | MS.gene07004 | 0.819189 | 1.32E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene07004 | -0.832105 | 1.14E-55 | -1.69E-46 |
| MS.gene056550 | MS.gene07004 | 0.829697 | 4.45E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene07004 | -0.817454 | 3.27E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene07004 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene07004 | 0.835524 | 1.60E-56 | -1.69E-46 |
| MS.gene056988 | MS.gene07004 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene07004 | 0.828405 | 9.15E-55 | -1.69E-46 |
| MS.gene057261 | MS.gene07004 | 0.812659 | 3.79E-51 | -1.69E-46 |
| MS.gene057291 | MS.gene07004 | 0.830923 | 2.23E-55 | -1.69E-46 |
| MS.gene057293 | MS.gene07004 | 0.847672 | 9.97E-60 | -1.69E-46 |
| MS.gene058068 | MS.gene07004 | 0.828377 | 9.30E-55 | -1.69E-46 |
| MS.gene058099 | MS.gene07004 | 0.858841 | 6.25E-63 | -1.69E-46 |
| MS.gene058109 | MS.gene07004 | 0.833754 | 4.45E-56 | -1.69E-46 |
| MS.gene058111 | MS.gene07004 | 0.855574 | 5.76E-62 | -1.69E-46 |
| MS.gene058157 | MS.gene07004 | -0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene07004 | 0.847315 | 1.25E-59 | -1.69E-46 |
| MS.gene058173 | MS.gene07004 | 0.835331 | 1.79E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene07004 | 0.845875 | 3.09E-59 | -1.69E-46 |
| MS.gene058268 | MS.gene07004 | 0.831016 | 2.12E-55 | -1.69E-46 |
| MS.gene058269 | MS.gene07004 | 0.819957 | 8.84E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene07004 | 0.827595 | 1.43E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene07004 | -0.839718 | 1.34E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene07004 | -0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene07004 | 0.842198 | 2.99E-58 | -1.69E-46 |
| MS.gene058494 | MS.gene07004 | 0.827695 | 1.36E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene07004 | -0.83672 | 7.93E-57 | -1.69E-46 |
| MS.gene058603 | MS.gene07004 | 0.813924 | 2.00E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene07004 | 0.826217 | 3.06E-54 | -1.69E-46 |
| MS.gene058629 | MS.gene07004 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene058630 | MS.gene07004 | 0.834314 | 3.22E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene07004 | -0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene07004 | -0.837401 | 5.31E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene07004 | -0.821421 | 4.07E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene07004 | 0.839401 | 1.62E-57 | -1.69E-46 |
| MS.gene059223 | MS.gene07004 | 0.827324 | 1.67E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene07004 | -0.815101 | 1.10E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene07004 | 0.818421 | 1.98E-52 | -1.69E-46 |
| MS.gene059691 | MS.gene07004 | 0.815274 | 1.01E-51 | -1.69E-46 |
| MS.gene059694 | MS.gene07004 | 0.83757 | 4.81E-57 | -1.69E-46 |
| MS.gene059697 | MS.gene07004 | 0.849697 | 2.74E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene07004 | -0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene07004 | -0.827645 | 1.40E-54 | -1.69E-46 |
| MS.gene059916 | MS.gene07004 | 0.807882 | 4.07E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene07004 | 0.818604 | 1.80E-52 | -1.69E-46 |
| MS.gene059955 | MS.gene07004 | 0.809317 | 2.01E-50 | -1.69E-46 |
| MS.gene060358 | MS.gene07004 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene07004 | 0.810175 | 1.31E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene07004 | 0.822657 | 2.11E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene07004 | -0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene07004 | -0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene07004 | -0.861077 | 1.32E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene07004 | -0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene07004 | 0.817937 | 2.54E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07004.t1 | MTR_7g108875 | 96.805 | 532 | 17 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| MS.gene07004.t1 | MTR_7g108890 | 66.467 | 501 | 160 | 4 | 36 | 532 | 34 | 530 | 0.0 | 684 |
| MS.gene07004.t1 | MTR_1g054880 | 63.793 | 522 | 172 | 5 | 14 | 532 | 19 | 526 | 0.0 | 682 |
| MS.gene07004.t1 | MTR_1g088020 | 66.200 | 500 | 164 | 3 | 36 | 532 | 26 | 523 | 0.0 | 675 |
| MS.gene07004.t1 | MTR_1g088225 | 62.991 | 535 | 181 | 5 | 1 | 532 | 1 | 521 | 0.0 | 666 |
| MS.gene07004.t1 | MTR_7g108900 | 61.952 | 502 | 185 | 5 | 34 | 532 | 30 | 528 | 0.0 | 635 |
| MS.gene07004.t1 | MTR_1g083520 | 52.811 | 498 | 203 | 6 | 37 | 531 | 27 | 495 | 1.06e-176 | 509 |
| MS.gene07004.t1 | MTR_0458s0010 | 51.028 | 535 | 210 | 8 | 1 | 532 | 1 | 486 | 1.73e-169 | 490 |
| MS.gene07004.t1 | MTR_3g010770 | 50.389 | 514 | 223 | 11 | 40 | 530 | 37 | 541 | 7.04e-166 | 483 |
| MS.gene07004.t1 | MTR_8g042910 | 50.295 | 509 | 231 | 8 | 41 | 532 | 77 | 580 | 8.47e-166 | 484 |
| MS.gene07004.t1 | MTR_7g108905 | 48.498 | 466 | 213 | 7 | 72 | 535 | 86 | 526 | 1.24e-137 | 410 |
| MS.gene07004.t1 | MTR_0458s0030 | 77.350 | 234 | 53 | 0 | 299 | 532 | 49 | 282 | 1.62e-134 | 393 |
| MS.gene07004.t1 | MTR_1g088040 | 77.350 | 234 | 53 | 0 | 299 | 532 | 49 | 282 | 1.62e-134 | 393 |
| MS.gene07004.t1 | MTR_2g044810 | 41.777 | 529 | 263 | 10 | 11 | 532 | 12 | 502 | 4.70e-126 | 380 |
| MS.gene07004.t1 | MTR_8g104655 | 44.112 | 501 | 250 | 10 | 41 | 535 | 35 | 511 | 4.99e-123 | 372 |
| MS.gene07004.t1 | MTR_4g025730 | 45.565 | 496 | 213 | 13 | 42 | 532 | 33 | 476 | 7.20e-122 | 368 |
| MS.gene07004.t1 | MTR_4g025690 | 45.238 | 504 | 208 | 17 | 42 | 532 | 32 | 480 | 1.91e-121 | 367 |
| MS.gene07004.t1 | MTR_1g008140 | 45.055 | 455 | 217 | 8 | 93 | 532 | 138 | 574 | 1.21e-119 | 365 |
| MS.gene07004.t1 | MTR_8g023310 | 43.200 | 500 | 264 | 7 | 40 | 532 | 70 | 556 | 3.45e-119 | 363 |
| MS.gene07004.t1 | MTR_8g104645 | 55.844 | 308 | 133 | 2 | 228 | 535 | 38 | 342 | 4.11e-119 | 356 |
| MS.gene07004.t1 | MTR_2g044880 | 46.101 | 436 | 196 | 9 | 101 | 532 | 92 | 492 | 7.34e-118 | 358 |
| MS.gene07004.t1 | MTR_4g124520 | 46.617 | 399 | 174 | 7 | 139 | 532 | 125 | 489 | 3.23e-116 | 354 |
| MS.gene07004.t1 | MTR_3g091380 | 40.399 | 552 | 275 | 14 | 9 | 532 | 39 | 564 | 1.09e-113 | 350 |
| MS.gene07004.t1 | MTR_3g010780 | 44.884 | 430 | 208 | 8 | 100 | 529 | 139 | 539 | 4.43e-113 | 347 |
| MS.gene07004.t1 | MTR_8g042900 | 45.349 | 430 | 206 | 8 | 100 | 529 | 146 | 546 | 1.02e-112 | 347 |
| MS.gene07004.t1 | MTR_7g112580 | 43.478 | 437 | 209 | 9 | 101 | 532 | 106 | 509 | 1.04e-112 | 345 |
| MS.gene07004.t1 | MTR_4g025670 | 43.182 | 440 | 210 | 7 | 93 | 532 | 57 | 456 | 1.08e-112 | 343 |
| MS.gene07004.t1 | MTR_7g050980 | 44.700 | 434 | 205 | 9 | 101 | 532 | 122 | 522 | 3.13e-112 | 345 |
| MS.gene07004.t1 | MTR_4g087980 | 44.240 | 434 | 204 | 7 | 101 | 532 | 86 | 483 | 1.59e-111 | 342 |
| MS.gene07004.t1 | MTR_7g050870 | 44.749 | 438 | 207 | 9 | 101 | 536 | 121 | 525 | 3.44e-111 | 342 |
| MS.gene07004.t1 | MTR_4g087970 | 42.760 | 442 | 203 | 7 | 101 | 532 | 83 | 484 | 2.85e-109 | 336 |
| MS.gene07004.t1 | MTR_7g050950 | 42.472 | 445 | 221 | 9 | 90 | 532 | 110 | 521 | 2.98e-105 | 327 |
| MS.gene07004.t1 | MTR_4g035980 | 38.933 | 506 | 255 | 11 | 42 | 532 | 40 | 506 | 1.76e-104 | 324 |
| MS.gene07004.t1 | MTR_4g124550 | 40.972 | 432 | 240 | 4 | 101 | 532 | 146 | 562 | 4.02e-103 | 322 |
| MS.gene07004.t1 | MTR_3g033690 | 38.845 | 502 | 258 | 12 | 42 | 535 | 36 | 496 | 9.76e-103 | 319 |
| MS.gene07004.t1 | MTR_3g008720 | 42.299 | 435 | 209 | 9 | 104 | 535 | 102 | 497 | 1.79e-102 | 318 |
| MS.gene07004.t1 | MTR_3g008640 | 42.299 | 435 | 209 | 9 | 104 | 535 | 102 | 497 | 5.64e-102 | 317 |
| MS.gene07004.t1 | MTR_3g008700 | 40.783 | 434 | 217 | 8 | 104 | 535 | 102 | 497 | 2.87e-101 | 315 |
| MS.gene07004.t1 | MTR_7g053360 | 40.553 | 434 | 218 | 8 | 104 | 535 | 102 | 497 | 1.16e-100 | 314 |
| MS.gene07004.t1 | MTR_8g104580 | 38.922 | 501 | 243 | 12 | 41 | 535 | 27 | 470 | 7.44e-97 | 303 |
| MS.gene07004.t1 | MTR_2g044660 | 53.237 | 278 | 124 | 2 | 252 | 529 | 327 | 598 | 6.86e-96 | 305 |
| MS.gene07004.t1 | MTR_8g023150 | 39.000 | 500 | 265 | 14 | 40 | 530 | 79 | 547 | 1.35e-94 | 300 |
| MS.gene07004.t1 | MTR_2g044810 | 58.182 | 220 | 92 | 0 | 313 | 532 | 214 | 433 | 1.84e-93 | 293 |
| MS.gene07004.t1 | MTR_1g086210 | 38.063 | 444 | 240 | 5 | 101 | 531 | 108 | 529 | 7.05e-92 | 292 |
| MS.gene07004.t1 | MTR_7g110560 | 35.283 | 547 | 300 | 16 | 1 | 527 | 1 | 513 | 1.02e-91 | 291 |
| MS.gene07004.t1 | MTR_1g083510 | 38.530 | 449 | 242 | 11 | 98 | 529 | 117 | 548 | 1.70e-89 | 286 |
| MS.gene07004.t1 | MTR_1g086190 | 35.529 | 501 | 287 | 8 | 40 | 527 | 50 | 527 | 7.70e-89 | 284 |
| MS.gene07004.t1 | MTR_8g093460 | 35.420 | 559 | 274 | 17 | 8 | 527 | 6 | 516 | 1.29e-88 | 283 |
| MS.gene07004.t1 | MTR_3g095920 | 35.766 | 548 | 276 | 18 | 11 | 527 | 27 | 529 | 1.15e-87 | 281 |
| MS.gene07004.t1 | MTR_0618s0020 | 61.111 | 198 | 77 | 0 | 338 | 535 | 1 | 198 | 1.00e-86 | 268 |
| MS.gene07004.t1 | MTR_1g083470 | 37.844 | 436 | 244 | 8 | 101 | 531 | 124 | 537 | 6.42e-86 | 277 |
| MS.gene07004.t1 | MTR_1g083500 | 37.844 | 436 | 244 | 8 | 101 | 531 | 124 | 537 | 6.42e-86 | 277 |
| MS.gene07004.t1 | MTR_7g112590 | 32.827 | 527 | 274 | 9 | 42 | 529 | 63 | 548 | 5.12e-84 | 273 |
| MS.gene07004.t1 | MTR_4g005170 | 37.413 | 433 | 246 | 9 | 101 | 529 | 129 | 540 | 4.33e-82 | 268 |
| MS.gene07004.t1 | MTR_7g110440 | 35.347 | 447 | 260 | 4 | 98 | 531 | 105 | 535 | 6.95e-82 | 266 |
| MS.gene07004.t1 | MTR_1g083490 | 37.269 | 432 | 248 | 7 | 101 | 529 | 129 | 540 | 9.98e-82 | 266 |
| MS.gene07004.t1 | MTR_7g110490 | 36.142 | 451 | 245 | 5 | 101 | 531 | 108 | 535 | 3.17e-81 | 265 |
| MS.gene07004.t1 | MTR_7g110510 | 36.142 | 451 | 245 | 5 | 101 | 531 | 108 | 535 | 3.17e-81 | 265 |
| MS.gene07004.t1 | MTR_4g120290 | 36.175 | 434 | 251 | 7 | 100 | 529 | 120 | 531 | 2.80e-80 | 262 |
| MS.gene07004.t1 | MTR_4g005180 | 36.574 | 432 | 251 | 7 | 101 | 529 | 111 | 522 | 1.38e-79 | 260 |
| MS.gene07004.t1 | MTR_4g120280 | 35.632 | 435 | 252 | 6 | 100 | 529 | 120 | 531 | 9.22e-79 | 258 |
| MS.gene07004.t1 | MTR_2g436040 | 33.710 | 531 | 303 | 14 | 5 | 529 | 18 | 505 | 5.45e-78 | 257 |
| MS.gene07004.t1 | MTR_8g088610 | 40.667 | 300 | 167 | 4 | 230 | 527 | 50 | 340 | 3.43e-70 | 230 |
| MS.gene07004.t1 | MTR_2g436050 | 32.863 | 496 | 299 | 10 | 42 | 532 | 60 | 526 | 4.48e-70 | 235 |
| MS.gene07004.t1 | MTR_5g083620 | 42.754 | 276 | 153 | 3 | 254 | 527 | 48 | 320 | 1.77e-69 | 228 |
| MS.gene07004.t1 | MTR_7g110420 | 32.599 | 454 | 269 | 6 | 98 | 530 | 105 | 542 | 1.62e-68 | 231 |
| MS.gene07004.t1 | MTR_7g111560 | 31.002 | 529 | 314 | 14 | 12 | 531 | 34 | 520 | 3.82e-66 | 224 |
| MS.gene07004.t1 | MTR_7g107180 | 41.135 | 282 | 151 | 5 | 252 | 532 | 7 | 274 | 1.61e-64 | 213 |
| MS.gene07004.t1 | MTR_2g105560 | 40.351 | 285 | 153 | 6 | 252 | 535 | 41 | 309 | 4.33e-63 | 210 |
| MS.gene07004.t1 | MTR_7g110430 | 30.989 | 455 | 235 | 8 | 98 | 531 | 105 | 501 | 8.60e-61 | 209 |
| MS.gene07004.t1 | MTR_6g088810 | 40.502 | 279 | 140 | 6 | 260 | 527 | 90 | 353 | 1.41e-54 | 189 |
| MS.gene07004.t1 | MTR_8g102380 | 39.502 | 281 | 142 | 6 | 260 | 527 | 88 | 353 | 1.62e-52 | 183 |
| MS.gene07004.t1 | MTR_6g012800 | 35.540 | 287 | 161 | 5 | 251 | 527 | 5 | 277 | 8.66e-51 | 177 |
| MS.gene07004.t1 | MTR_7g011530 | 35.548 | 301 | 160 | 9 | 251 | 539 | 5 | 283 | 3.61e-47 | 167 |
| MS.gene07004.t1 | MTR_6g024165 | 36.111 | 288 | 156 | 7 | 251 | 527 | 40 | 310 | 6.25e-47 | 167 |
| MS.gene07004.t1 | MTR_1g086540 | 35.664 | 286 | 159 | 7 | 252 | 527 | 50 | 320 | 9.58e-47 | 167 |
| MS.gene07004.t1 | MTR_8g102380 | 39.683 | 252 | 124 | 6 | 260 | 498 | 88 | 324 | 3.41e-45 | 162 |
| MS.gene07004.t1 | MTR_6g042660 | 32.423 | 293 | 170 | 8 | 241 | 527 | 26 | 296 | 1.22e-42 | 155 |
| MS.gene07004.t1 | MTR_7g092780 | 33.217 | 286 | 169 | 6 | 252 | 527 | 90 | 363 | 1.40e-42 | 157 |
| MS.gene07004.t1 | MTR_4g124740 | 34.014 | 294 | 162 | 9 | 236 | 519 | 39 | 310 | 1.81e-42 | 155 |
| MS.gene07004.t1 | MTR_6g042690 | 34.667 | 300 | 159 | 10 | 241 | 527 | 28 | 303 | 1.82e-42 | 155 |
| MS.gene07004.t1 | MTR_7g102600 | 33.688 | 282 | 168 | 4 | 253 | 527 | 100 | 369 | 3.19e-42 | 156 |
| MS.gene07004.t1 | MTR_2g039530 | 34.967 | 306 | 166 | 9 | 234 | 532 | 40 | 319 | 8.70e-41 | 150 |
| MS.gene07004.t1 | MTR_1g033050 | 34.035 | 285 | 162 | 7 | 252 | 527 | 17 | 284 | 6.87e-39 | 144 |
| MS.gene07004.t1 | MTR_5g095490 | 33.688 | 282 | 160 | 6 | 258 | 527 | 67 | 333 | 1.37e-38 | 145 |
| MS.gene07004.t1 | MTR_5g093970 | 34.397 | 282 | 170 | 6 | 248 | 528 | 39 | 306 | 2.77e-37 | 141 |
| MS.gene07004.t1 | MTR_5g012600 | 29.758 | 289 | 176 | 6 | 251 | 527 | 62 | 335 | 1.26e-36 | 140 |
| MS.gene07004.t1 | MTR_5g088300 | 33.452 | 281 | 167 | 6 | 248 | 528 | 33 | 293 | 1.30e-35 | 136 |
| MS.gene07004.t1 | MTR_5g083590 | 29.496 | 278 | 144 | 4 | 252 | 528 | 7 | 233 | 1.58e-34 | 131 |
| MS.gene07004.t1 | MTR_5g088290 | 31.915 | 282 | 171 | 5 | 248 | 528 | 44 | 305 | 1.84e-34 | 133 |
| MS.gene07004.t1 | MTR_4g074290 | 32.270 | 282 | 170 | 7 | 251 | 526 | 70 | 336 | 6.08e-34 | 132 |
| MS.gene07004.t1 | MTR_2g073390 | 31.366 | 322 | 189 | 11 | 233 | 542 | 53 | 354 | 3.45e-33 | 130 |
| MS.gene07004.t1 | MTR_0009s0350 | 32.333 | 300 | 180 | 9 | 251 | 542 | 70 | 354 | 4.29e-33 | 130 |
| MS.gene07004.t1 | MTR_0009s0340 | 32.333 | 300 | 180 | 9 | 251 | 542 | 70 | 354 | 4.29e-33 | 130 |
| MS.gene07004.t1 | MTR_5g088280 | 32.979 | 282 | 167 | 6 | 248 | 528 | 35 | 295 | 7.83e-33 | 128 |
| MS.gene07004.t1 | MTR_2g033970 | 27.723 | 303 | 192 | 6 | 234 | 527 | 38 | 322 | 8.50e-33 | 129 |
| MS.gene07004.t1 | MTR_4g051810 | 30.605 | 281 | 175 | 4 | 247 | 527 | 32 | 292 | 5.53e-31 | 123 |
| MS.gene07004.t1 | MTR_8g036225 | 30.928 | 291 | 169 | 8 | 251 | 530 | 32 | 301 | 8.77e-30 | 120 |
| MS.gene07004.t1 | MTR_2g436600 | 27.000 | 300 | 189 | 8 | 234 | 527 | 37 | 312 | 1.58e-29 | 119 |
| MS.gene07004.t1 | MTR_6g025590 | 35.429 | 175 | 96 | 5 | 251 | 414 | 48 | 216 | 2.51e-21 | 93.6 |
| MS.gene07004.t1 | MTR_0408s0030 | 42.424 | 99 | 44 | 3 | 431 | 527 | 36 | 123 | 2.85e-17 | 79.3 |
| MS.gene07004.t1 | MTR_2g436070 | 25.460 | 326 | 205 | 10 | 11 | 326 | 24 | 321 | 6.31e-15 | 77.0 |
| MS.gene07004.t1 | MTR_4g130790 | 27.094 | 203 | 135 | 5 | 252 | 446 | 22 | 219 | 1.27e-13 | 71.6 |
| MS.gene07004.t1 | MTR_6g024200 | 32.877 | 146 | 79 | 4 | 383 | 527 | 125 | 252 | 7.79e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07004.t1 | AT4G02330 | 62.292 | 541 | 184 | 9 | 8 | 532 | 3 | 539 | 0.0 | 672 |
| MS.gene07004.t1 | AT1G02810 | 63.619 | 514 | 164 | 6 | 42 | 532 | 32 | 545 | 0.0 | 663 |
| MS.gene07004.t1 | AT2G47550 | 62.675 | 501 | 174 | 7 | 37 | 532 | 34 | 526 | 0.0 | 612 |
| MS.gene07004.t1 | AT5G04970 | 48.627 | 510 | 236 | 8 | 41 | 532 | 87 | 588 | 9.32e-166 | 484 |
| MS.gene07004.t1 | AT3G10720 | 49.016 | 508 | 237 | 7 | 41 | 532 | 82 | 583 | 1.18e-163 | 479 |
| MS.gene07004.t1 | AT2G26440 | 42.471 | 518 | 267 | 10 | 22 | 532 | 22 | 515 | 6.65e-122 | 369 |
| MS.gene07004.t1 | AT2G45220 | 43.504 | 508 | 212 | 11 | 40 | 532 | 32 | 479 | 6.30e-121 | 365 |
| MS.gene07004.t1 | AT1G11580 | 40.299 | 536 | 281 | 9 | 5 | 532 | 20 | 524 | 1.22e-120 | 367 |
| MS.gene07004.t1 | AT1G11580 | 40.299 | 536 | 281 | 9 | 5 | 532 | 41 | 545 | 3.51e-120 | 366 |
| MS.gene07004.t1 | AT1G23200 | 41.617 | 507 | 259 | 10 | 41 | 532 | 37 | 521 | 9.31e-117 | 356 |
| MS.gene07004.t1 | AT3G43270 | 45.747 | 435 | 211 | 8 | 101 | 532 | 80 | 492 | 5.72e-115 | 351 |
| MS.gene07004.t1 | AT1G53830 | 42.063 | 504 | 268 | 7 | 40 | 532 | 64 | 554 | 3.97e-113 | 348 |
| MS.gene07004.t1 | AT3G60730 | 43.439 | 442 | 217 | 8 | 101 | 532 | 68 | 486 | 2.69e-112 | 343 |
| MS.gene07004.t1 | AT3G14310 | 41.165 | 515 | 265 | 8 | 40 | 532 | 61 | 559 | 4.27e-111 | 343 |
| MS.gene07004.t1 | AT3G49220 | 43.578 | 436 | 223 | 6 | 98 | 532 | 150 | 563 | 8.81e-111 | 342 |
| MS.gene07004.t1 | AT3G49220 | 43.578 | 436 | 223 | 6 | 98 | 532 | 195 | 608 | 1.98e-110 | 343 |
| MS.gene07004.t1 | AT4G02320 | 43.601 | 461 | 220 | 11 | 77 | 530 | 56 | 483 | 3.64e-110 | 338 |
| MS.gene07004.t1 | AT3G10720 | 65.198 | 227 | 79 | 0 | 306 | 532 | 1 | 227 | 4.25e-110 | 329 |
| MS.gene07004.t1 | AT4G33220 | 44.843 | 446 | 215 | 10 | 101 | 535 | 68 | 493 | 1.75e-109 | 337 |
| MS.gene07004.t1 | AT1G53840 | 39.771 | 523 | 271 | 13 | 24 | 530 | 58 | 552 | 1.49e-108 | 336 |
| MS.gene07004.t1 | AT4G02300 | 42.857 | 434 | 217 | 7 | 101 | 531 | 93 | 498 | 2.95e-108 | 334 |
| MS.gene07004.t1 | AT3G05620 | 41.164 | 464 | 214 | 9 | 88 | 532 | 86 | 509 | 3.28e-108 | 334 |
| MS.gene07004.t1 | AT5G51490 | 40.278 | 504 | 250 | 12 | 42 | 532 | 38 | 503 | 3.86e-108 | 333 |
| MS.gene07004.t1 | AT5G53370 | 43.964 | 439 | 218 | 9 | 99 | 532 | 137 | 552 | 9.17e-108 | 334 |
| MS.gene07004.t1 | AT5G04960 | 44.670 | 394 | 195 | 7 | 136 | 529 | 158 | 528 | 2.23e-107 | 332 |
| MS.gene07004.t1 | AT5G53370 | 43.964 | 439 | 218 | 9 | 99 | 532 | 173 | 588 | 5.23e-107 | 333 |
| MS.gene07004.t1 | AT4G33220 | 53.642 | 302 | 131 | 2 | 234 | 535 | 80 | 372 | 1.54e-105 | 322 |
| MS.gene07004.t1 | AT4G00190 | 40.606 | 495 | 229 | 12 | 42 | 532 | 8 | 441 | 1.76e-105 | 325 |
| MS.gene07004.t1 | AT2G43050 | 40.685 | 467 | 224 | 9 | 69 | 531 | 65 | 482 | 7.28e-104 | 322 |
| MS.gene07004.t1 | AT3G05610 | 40.647 | 433 | 229 | 6 | 101 | 529 | 122 | 530 | 1.24e-103 | 326 |
| MS.gene07004.t1 | AT5G51500 | 39.766 | 513 | 240 | 13 | 42 | 532 | 42 | 507 | 2.05e-103 | 322 |
| MS.gene07004.t1 | AT2G26450 | 40.315 | 444 | 216 | 9 | 101 | 532 | 174 | 580 | 2.16e-103 | 324 |
| MS.gene07004.t1 | AT3G59010 | 45.980 | 398 | 180 | 9 | 136 | 531 | 130 | 494 | 3.58e-102 | 318 |
| MS.gene07004.t1 | AT5G27870 | 40.647 | 433 | 233 | 6 | 98 | 529 | 118 | 527 | 9.10e-102 | 323 |
| MS.gene07004.t1 | AT3G10710 | 39.279 | 499 | 258 | 13 | 36 | 529 | 68 | 526 | 2.31e-100 | 314 |
| MS.gene07004.t1 | AT4G33230 | 39.819 | 442 | 230 | 9 | 101 | 532 | 160 | 575 | 7.38e-100 | 314 |
| MS.gene07004.t1 | AT3G14300 | 41.002 | 439 | 220 | 8 | 101 | 530 | 525 | 933 | 2.46e-93 | 306 |
| MS.gene07004.t1 | AT4G03930 | 35.645 | 519 | 275 | 10 | 33 | 532 | 13 | 491 | 6.85e-92 | 291 |
| MS.gene07004.t1 | AT5G20860 | 36.420 | 486 | 247 | 13 | 64 | 531 | 64 | 505 | 2.08e-90 | 288 |
| MS.gene07004.t1 | AT1G11590 | 35.067 | 519 | 278 | 11 | 33 | 532 | 13 | 491 | 2.67e-89 | 284 |
| MS.gene07004.t1 | AT5G49180 | 39.220 | 436 | 237 | 8 | 101 | 529 | 121 | 535 | 4.36e-89 | 285 |
| MS.gene07004.t1 | AT3G47400 | 39.729 | 443 | 219 | 9 | 101 | 531 | 154 | 560 | 7.39e-89 | 285 |
| MS.gene07004.t1 | AT3G27980 | 49.822 | 281 | 136 | 2 | 252 | 532 | 189 | 464 | 5.52e-88 | 280 |
| MS.gene07004.t1 | AT3G06830 | 41.206 | 398 | 216 | 8 | 136 | 529 | 150 | 533 | 8.86e-88 | 281 |
| MS.gene07004.t1 | AT1G11370 | 50.000 | 244 | 119 | 1 | 252 | 495 | 46 | 286 | 8.08e-81 | 254 |
| MS.gene07004.t1 | AT5G09760 | 46.713 | 289 | 143 | 6 | 248 | 527 | 237 | 523 | 5.02e-79 | 258 |
| MS.gene07004.t1 | AT5G09760 | 46.713 | 289 | 143 | 6 | 248 | 527 | 263 | 549 | 6.69e-79 | 259 |
| MS.gene07004.t1 | AT5G64640 | 34.942 | 518 | 267 | 16 | 41 | 527 | 96 | 574 | 7.36e-78 | 256 |
| MS.gene07004.t1 | AT5G20860 | 33.745 | 486 | 232 | 12 | 64 | 531 | 64 | 477 | 1.46e-77 | 253 |
| MS.gene07004.t1 | AT4G15980 | 45.878 | 279 | 147 | 2 | 252 | 529 | 392 | 667 | 2.65e-74 | 249 |
| MS.gene07004.t1 | AT4G15980 | 45.878 | 279 | 147 | 2 | 252 | 529 | 402 | 677 | 5.65e-74 | 249 |
| MS.gene07004.t1 | AT2G47030 | 30.357 | 560 | 337 | 11 | 8 | 527 | 6 | 552 | 6.53e-69 | 233 |
| MS.gene07004.t1 | AT2G47040 | 30.783 | 562 | 339 | 14 | 8 | 527 | 6 | 559 | 1.52e-67 | 229 |
| MS.gene07004.t1 | AT3G62170 | 42.960 | 277 | 152 | 3 | 254 | 527 | 279 | 552 | 3.45e-64 | 220 |
| MS.gene07004.t1 | AT5G19730 | 38.351 | 279 | 146 | 5 | 260 | 527 | 94 | 357 | 8.43e-51 | 179 |
| MS.gene07004.t1 | AT3G29090 | 36.332 | 289 | 156 | 8 | 251 | 527 | 6 | 278 | 6.51e-48 | 169 |
| MS.gene07004.t1 | AT2G21610 | 34.657 | 277 | 163 | 5 | 251 | 527 | 50 | 308 | 2.01e-46 | 166 |
| MS.gene07004.t1 | AT1G05310 | 33.544 | 316 | 177 | 6 | 230 | 527 | 64 | 364 | 2.79e-46 | 167 |
| MS.gene07004.t1 | AT2G21610 | 34.657 | 277 | 163 | 5 | 251 | 527 | 55 | 313 | 3.03e-46 | 166 |
| MS.gene07004.t1 | AT2G36700 | 34.043 | 282 | 168 | 4 | 251 | 527 | 41 | 309 | 1.85e-45 | 163 |
| MS.gene07004.t1 | AT2G36710 | 35.461 | 282 | 163 | 4 | 251 | 525 | 90 | 359 | 6.84e-45 | 164 |
| MS.gene07004.t1 | AT5G07430 | 33.667 | 300 | 180 | 5 | 232 | 527 | 47 | 331 | 1.05e-44 | 162 |
| MS.gene07004.t1 | AT5G18990 | 34.483 | 290 | 157 | 7 | 252 | 527 | 29 | 299 | 4.25e-41 | 151 |
| MS.gene07004.t1 | AT3G17060 | 31.058 | 293 | 175 | 6 | 244 | 527 | 38 | 312 | 5.20e-41 | 151 |
| MS.gene07004.t1 | AT3G24130 | 33.220 | 295 | 164 | 7 | 247 | 527 | 29 | 304 | 1.03e-39 | 147 |
| MS.gene07004.t1 | AT2G19150 | 33.096 | 281 | 170 | 6 | 252 | 527 | 41 | 308 | 1.83e-38 | 144 |
| MS.gene07004.t1 | AT5G47500 | 31.164 | 292 | 168 | 7 | 251 | 527 | 60 | 333 | 7.20e-38 | 143 |
| MS.gene07004.t1 | AT1G44980 | 43.085 | 188 | 101 | 3 | 231 | 418 | 60 | 241 | 1.69e-36 | 136 |
| MS.gene07004.t1 | AT5G55590 | 31.507 | 292 | 173 | 6 | 248 | 527 | 78 | 354 | 5.74e-35 | 135 |
| MS.gene07004.t1 | AT5G07420 | 30.605 | 281 | 176 | 5 | 249 | 525 | 64 | 329 | 1.08e-34 | 134 |
| MS.gene07004.t1 | AT5G55590 | 31.939 | 263 | 152 | 6 | 248 | 498 | 78 | 325 | 1.49e-34 | 133 |
| MS.gene07004.t1 | AT5G07410 | 28.931 | 318 | 202 | 9 | 231 | 541 | 47 | 347 | 3.94e-34 | 133 |
| MS.gene07004.t1 | AT1G69940 | 28.808 | 302 | 193 | 8 | 231 | 527 | 47 | 331 | 9.32e-34 | 132 |
| MS.gene07004.t1 | AT5G61680 | 31.095 | 283 | 173 | 7 | 251 | 527 | 68 | 334 | 1.21e-33 | 131 |
| MS.gene07004.t1 | AT2G19150 | 32.941 | 255 | 153 | 6 | 252 | 501 | 41 | 282 | 1.46e-33 | 129 |
| MS.gene07004.t1 | AT2G47280 | 31.597 | 288 | 166 | 7 | 252 | 527 | 35 | 303 | 1.50e-33 | 130 |
| MS.gene07004.t1 | AT5G26810 | 33.007 | 306 | 167 | 10 | 240 | 527 | 23 | 308 | 1.80e-31 | 125 |
| MS.gene07004.t1 | AT3G49220 | 31.381 | 239 | 141 | 6 | 98 | 335 | 195 | 411 | 2.55e-20 | 94.0 |
Find 110 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTACATGCAAACATTTA+TGG | 0.129976 | 7.2:-5248570 | MS.gene07004:CDS |
| TGGTGCAGTTTCAACATATT+TGG | 0.167427 | 7.2:-5248621 | MS.gene07004:CDS |
| TCGCTAGAAACAGATTTATT+TGG | 0.177140 | 7.2:+5249908 | None:intergenic |
| TACAGAGAATGTGACATTTA+TGG | 0.181984 | 7.2:-5248830 | MS.gene07004:CDS |
| GTGGATAGAGGTTACAATTT+TGG | 0.190584 | 7.2:+5248768 | None:intergenic |
| AAAGCTAACGTTTATGATTA+TGG | 0.233483 | 7.2:-5250550 | MS.gene07004:CDS |
| TATGCTGAGTTTAATAATAC+TGG | 0.243616 | 7.2:-5248482 | MS.gene07004:CDS |
| GTTGGAGATATTTGTTGATT+AGG | 0.292074 | 7.2:+5250479 | None:intergenic |
| AAATCCTTTGTTAGAGTGTT+TGG | 0.294966 | 7.2:+5250114 | None:intergenic |
| GGAACAGTAGATTTCATATT+CGG | 0.296112 | 7.2:-5248809 | MS.gene07004:CDS |
| CCTGGTGAGATAGGTGTAAT+TGG | 0.334751 | 7.2:+5250631 | None:intergenic |
| TGCTTTCTTTACTAAAGGTT+GGG | 0.335009 | 7.2:-5250173 | MS.gene07004:CDS |
| GACAAACCAACAAACATGTT+TGG | 0.337556 | 7.2:-5250287 | MS.gene07004:CDS |
| GTGTAATTGTCTCGTTGATT+TGG | 0.342878 | 7.2:-5247205 | MS.gene07004:CDS |
| GAGATAGGTGTAATTGGATT+TGG | 0.345211 | 7.2:+5250637 | None:intergenic |
| TTGCTTTCTTTACTAAAGGT+TGG | 0.347374 | 7.2:-5250174 | MS.gene07004:CDS |
| ATGTATAATTACCGAATGTT+GGG | 0.354549 | 7.2:+5249729 | None:intergenic |
| TCTCTTGCTTTCTTTACTAA+AGG | 0.356675 | 7.2:-5250178 | MS.gene07004:CDS |
| GGTGCAGTTTCAACATATTT+GGG | 0.361223 | 7.2:-5248620 | MS.gene07004:CDS |
| CATGCTGCTCCTGGTGAGAT+AGG | 0.380293 | 7.2:+5250622 | None:intergenic |
| TGTAATTGTCTCGTTGATTT+GGG | 0.397876 | 7.2:-5247204 | MS.gene07004:CDS |
| AAGCAGTGGCACTTAGAAAC+GGG | 0.398121 | 7.2:-5248931 | MS.gene07004:CDS |
| ATGTTGCTGGGTGGCGTGCT+TGG | 0.401190 | 7.2:-5248535 | MS.gene07004:CDS |
| AAGAGAGACACTATAGAGTT+TGG | 0.403782 | 7.2:+5250195 | None:intergenic |
| GACCATCCAAACATGTTTGT+TGG | 0.404138 | 7.2:+5250281 | None:intergenic |
| GATGTACCTGTGTCTTGGTT+AGG | 0.407899 | 7.2:+5248692 | None:intergenic |
| GAATCGCGCTGAGCAATGTT+TGG | 0.411363 | 7.2:+5250311 | None:intergenic |
| TGGGAGAATGGATTTGCAAT+AGG | 0.413977 | 7.2:+5250579 | None:intergenic |
| AATGTATAATTACCGAATGT+TGG | 0.421859 | 7.2:+5249728 | None:intergenic |
| GTGGATTTGCATGCTGCTCC+TGG | 0.426506 | 7.2:+5250613 | None:intergenic |
| GATTTGCAATAGGTTGGGTC+AGG | 0.427569 | 7.2:+5250589 | None:intergenic |
| GCATTGAATTGTCCACTCAT+TGG | 0.449744 | 7.2:+5248740 | None:intergenic |
| TGTTGCTGGGTGGCGTGCTT+GGG | 0.450946 | 7.2:-5248534 | MS.gene07004:CDS |
| AATAAATCTGTTTCTAGCGA+TGG | 0.450968 | 7.2:-5249905 | MS.gene07004:CDS |
| TTGCTTTAATTGTACAGTTG+TGG | 0.453845 | 7.2:+5248666 | None:intergenic |
| CGTTTCTAAGTGCCACTGCT+TGG | 0.461010 | 7.2:+5248933 | None:intergenic |
| ATGAATGTTGCAGCTGTGGT+TGG | 0.462240 | 7.2:-5249013 | MS.gene07004:intron |
| TAGTGCTCGCACAGCGGTGG+TGG | 0.463374 | 7.2:+5250441 | None:intergenic |
| TGAGAGGGTATTACATAGCT+TGG | 0.463691 | 7.2:+5250717 | None:intergenic |
| AGAATGGATTTGCAATAGGT+TGG | 0.473235 | 7.2:+5250583 | None:intergenic |
| GAATGGATTTGCAATAGGTT+GGG | 0.475452 | 7.2:+5250584 | None:intergenic |
| GATAATGTGATTAATGTTGC+TGG | 0.479559 | 7.2:-5248548 | MS.gene07004:CDS |
| GCTGGGTGGCGTGCTTGGGA+TGG | 0.482960 | 7.2:-5248530 | MS.gene07004:CDS |
| CAAGCAGTGGCACTTAGAAA+CGG | 0.489043 | 7.2:-5248932 | MS.gene07004:CDS |
| CAGTTTGAAAAGAGTTTGAA+AGG | 0.492675 | 7.2:+5250380 | None:intergenic |
| TGTGGTTGGGCAAGGATTCG+TGG | 0.498726 | 7.2:-5248999 | MS.gene07004:CDS |
| ATCACAGTGTTGTTGATGGC+TGG | 0.499298 | 7.2:-5249766 | MS.gene07004:CDS |
| GTTGATGGCTGGACCACATT+CGG | 0.499631 | 7.2:-5249755 | MS.gene07004:CDS |
| AGTTGAGGTCGCTGAGCGAT+TGG | 0.500496 | 7.2:+5250410 | None:intergenic |
| TCACAGCACCTGCTGTGTTA+CGG | 0.501976 | 7.2:+5248960 | None:intergenic |
| GGCAATCACAGTGTTGTTGA+TGG | 0.508915 | 7.2:-5249770 | MS.gene07004:CDS |
| GGATTGATGTACCTGTGTCT+TGG | 0.509046 | 7.2:+5248687 | None:intergenic |
| TTTGCAATAGGTTGGGTCAG+GGG | 0.511394 | 7.2:+5250591 | None:intergenic |
| TTTCATATTCGGAAATGCTA+AGG | 0.512250 | 7.2:-5248798 | MS.gene07004:CDS |
| TGAATGTTGCAGCTGTGGTT+GGG | 0.516948 | 7.2:-5249012 | MS.gene07004:intron |
| AAGTTTCTTCCAAGTTTACA+AGG | 0.517405 | 7.2:-5250343 | MS.gene07004:CDS |
| GAGTTTAATAATACTGGGCC+AGG | 0.520794 | 7.2:-5248476 | MS.gene07004:CDS |
| ATTGTGACGGTTAGTCAAGA+TGG | 0.521081 | 7.2:-5249974 | MS.gene07004:CDS |
| CACAGCGGTGGTGGAAAGAG+TGG | 0.524616 | 7.2:+5250450 | None:intergenic |
| AGTTTGGTGTCATTAGAAAG+TGG | 0.527999 | 7.2:+5250211 | None:intergenic |
| ATAAATCTGTTTCTAGCGAT+GGG | 0.535312 | 7.2:-5249904 | MS.gene07004:CDS |
| AACCAACAAACATGTTTGGA+TGG | 0.537810 | 7.2:-5250283 | MS.gene07004:CDS |
| ACATTCGGCTCCCCAACATT+CGG | 0.540697 | 7.2:-5249740 | MS.gene07004:intron |
| CTACCATCAGTGCTAGAGCC+TGG | 0.540713 | 7.2:+5248458 | None:intergenic |
| TCATTGGAAGACGTGGATAG+AGG | 0.541407 | 7.2:+5248756 | None:intergenic |
| GTTCTAGAATACTCTTTCCA+TGG | 0.544216 | 7.2:+5248593 | None:intergenic |
| AATTGGATTTGGACTAGTAC+CGG | 0.546025 | 7.2:+5250648 | None:intergenic |
| TTAAAGACACATCTTCAGCT+TGG | 0.547064 | 7.2:-5250258 | MS.gene07004:CDS |
| GCAATAGGTTGGGTCAGGGG+TGG | 0.547288 | 7.2:+5250594 | None:intergenic |
| AATTCCAAACACTCTAACAA+AGG | 0.556033 | 7.2:-5250118 | MS.gene07004:CDS |
| ATTTGCAATAGGTTGGGTCA+GGG | 0.557363 | 7.2:+5250590 | None:intergenic |
| GTTGCAGCTGTGGTTGGGCA+AGG | 0.558786 | 7.2:-5249007 | MS.gene07004:intron |
| TGGAAAGAGTGGAGCGACGT+TGG | 0.560848 | 7.2:+5250461 | None:intergenic |
| ACGGTTAGTCAAGATGGAAG+TGG | 0.570515 | 7.2:-5249968 | MS.gene07004:CDS |
| CCAATTACACCTATCTCACC+AGG | 0.573664 | 7.2:-5250631 | MS.gene07004:CDS |
| GTGGTTGGGCAAGGATTCGT+GGG | 0.574159 | 7.2:-5248998 | MS.gene07004:CDS |
| CAACATATTTGGGAAGACCA+TGG | 0.574540 | 7.2:-5248610 | MS.gene07004:CDS |
| ATGACCATCCGTAACACAGC+AGG | 0.577711 | 7.2:-5248968 | MS.gene07004:CDS |
| GATGATTTAGCTTCTAGCAA+TGG | 0.582638 | 7.2:-5248641 | MS.gene07004:CDS |
| ATGCTGAGTTTAATAATACT+GGG | 0.583978 | 7.2:-5248481 | MS.gene07004:CDS |
| AAAGAATGAGAAATATTGAG+AGG | 0.586083 | 7.2:+5250701 | None:intergenic |
| ATTAACAAGACTATTATCAC+TGG | 0.586139 | 7.2:-5249791 | MS.gene07004:CDS |
| GGGCCAGGCTCTAGCACTGA+TGG | 0.587768 | 7.2:-5248461 | MS.gene07004:CDS |
| TTGTAGTGCTCGCACAGCGG+TGG | 0.588898 | 7.2:+5250438 | None:intergenic |
| TTTACAGTTGCAGTTTCGAA+GGG | 0.589810 | 7.2:-5248892 | MS.gene07004:CDS |
| TCAAGTTGGTGAGGATGTTG+TGG | 0.590169 | 7.2:-5250005 | MS.gene07004:CDS |
| TGCTGTGAAGCACCAAGCAG+TGG | 0.592757 | 7.2:-5248945 | MS.gene07004:CDS |
| GATGGTAGAGTGACGTGGCA+AGG | 0.596651 | 7.2:-5248443 | MS.gene07004:CDS |
| GAATGTTGGGGAGCCGAATG+TGG | 0.602659 | 7.2:+5249742 | None:intergenic |
| TCAGAGTGATCAAGTTGGTG+AGG | 0.605937 | 7.2:-5250014 | MS.gene07004:CDS |
| AAGAATGAGAAATATTGAGA+GGG | 0.609418 | 7.2:+5250702 | None:intergenic |
| AATGTGTGTATAACGTGTCT+TGG | 0.609557 | 7.2:+5248867 | None:intergenic |
| CTTCTTCAGAGTGATCAAGT+TGG | 0.613368 | 7.2:-5250019 | MS.gene07004:CDS |
| ATGGAAAGAGTATTCTAGAA+CGG | 0.614937 | 7.2:-5248591 | MS.gene07004:CDS |
| TATCCACGTCTTCCAATGAG+TGG | 0.622034 | 7.2:-5248752 | MS.gene07004:CDS |
| TTCAATGCAATCACTGCACA+AGG | 0.625555 | 7.2:-5248725 | MS.gene07004:CDS |
| TTGAAAGGAAATCAGAGTTG+AGG | 0.625641 | 7.2:+5250395 | None:intergenic |
| TGTATAATTACCGAATGTTG+GGG | 0.625668 | 7.2:+5249730 | None:intergenic |
| ATTGCTAGAAGCTAAATCAT+CGG | 0.626819 | 7.2:+5248643 | None:intergenic |
| AGCACCTGCTGTGTTACGGA+TGG | 0.634966 | 7.2:+5248964 | None:intergenic |
| ATAATGTGATTAATGTTGCT+GGG | 0.635060 | 7.2:-5248547 | MS.gene07004:CDS |
| TGTCCACTCATTGGAAGACG+TGG | 0.636776 | 7.2:+5248749 | None:intergenic |
| CGATTTATGAGTCAGTTAGT+CGG | 0.649371 | 7.2:-5250048 | MS.gene07004:CDS |
| TTTATGAGTCAGTTAGTCGG+AGG | 0.663720 | 7.2:-5250045 | MS.gene07004:CDS |
| ACAGATCCTAACCAAGACAC+AGG | 0.667761 | 7.2:-5248698 | MS.gene07004:CDS |
| ATCTTGTAGTGCTCGCACAG+CGG | 0.715861 | 7.2:+5250435 | None:intergenic |
| TGTGGTGAGAGATATTGTGA+CGG | 0.718292 | 7.2:-5249987 | MS.gene07004:CDS |
| AGCAGTGGCACTTAGAAACG+GGG | 0.723770 | 7.2:-5248930 | MS.gene07004:CDS |
| GCACTGATGGTAGAGTGACG+TGG | 0.734964 | 7.2:-5248448 | MS.gene07004:CDS |
| ATGTGATTAATGTTGCTGGG+TGG | 0.776487 | 7.2:-5248544 | MS.gene07004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGACATTAATTAATTAATTA+AGG | + | chr7.2:5249605-5249624 | None:intergenic | 10.0% |
| !!! | AAAAAACTTTTATTTAGTAA+TGG | + | chr7.2:5250119-5250138 | None:intergenic | 10.0% |
| !!! | TTTAAGTTTTAGTTTTTTTT+AGG | + | chr7.2:5248295-5248314 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATCGATATATTT+TGG | - | chr7.2:5250133-5250152 | MS.gene07004:CDS | 10.0% |
| !! | AATTATTAAATTGAAAACAG+AGG | + | chr7.2:5248456-5248475 | None:intergenic | 15.0% |
| !! | AGAAAGTAAAATCAAATAAA+GGG | + | chr7.2:5250043-5250062 | None:intergenic | 15.0% |
| !! | AGAAATAATTTAACTATTGT+GGG | - | chr7.2:5248353-5248372 | MS.gene07004:intron | 15.0% |
| !!! | ATCAAGTAAAGATTTTATAT+AGG | - | chr7.2:5248822-5248841 | MS.gene07004:CDS | 15.0% |
| !! | AACTACTTTGTAAAATAAGT+TGG | - | chr7.2:5249713-5249732 | MS.gene07004:intron | 20.0% |
| !! | ACACAAAATATATACATTAG+CGG | - | chr7.2:5248698-5248717 | MS.gene07004:CDS | 20.0% |
| !! | ATATTAATTAATATGAACGG+TGG | - | chr7.2:5250423-5250442 | MS.gene07004:CDS | 20.0% |
| !! | ATGAAACATACATATAAGAA+TGG | + | chr7.2:5250643-5250662 | None:intergenic | 20.0% |
| !! | GAAATAATTTAACTATTGTG+GGG | - | chr7.2:5248354-5248373 | MS.gene07004:intron | 20.0% |
| !! | GAGAAAGTAAAATCAAATAA+AGG | + | chr7.2:5250044-5250063 | None:intergenic | 20.0% |
| !! | GAGAAATAATTTAACTATTG+TGG | - | chr7.2:5248352-5248371 | MS.gene07004:intron | 20.0% |
| !! | GGTATGTTAAAAAAAATGTT+TGG | + | chr7.2:5248729-5248748 | None:intergenic | 20.0% |
| !! | TCTAACAAAGGATTTAAAAA+CGG | - | chr7.2:5247815-5247834 | MS.gene07004:intron | 20.0% |
| !! | TTGATGAAAAAATATAGAAC+TGG | + | chr7.2:5248220-5248239 | None:intergenic | 20.0% |
| !!! | AAACTTAAAGACATTTTTAC+TGG | - | chr7.2:5248306-5248325 | MS.gene07004:intron | 20.0% |
| !!! | AAACTTTTATTTAGTAATGG+TGG | + | chr7.2:5250116-5250135 | None:intergenic | 20.0% |
| !!! | AGTTTTATAAATAAAGACTG+AGG | - | chr7.2:5248771-5248790 | MS.gene07004:CDS | 20.0% |
| !!! | ATCGTTTTTGACATATTTTA+GGG | + | chr7.2:5248421-5248440 | None:intergenic | 20.0% |
| !!! | ATTTTACAAAGTAGTTATAG+TGG | + | chr7.2:5249709-5249728 | None:intergenic | 20.0% |
| !!! | CATTTTAGAAAGCAATTTTT+CGG | + | chr7.2:5250671-5250690 | None:intergenic | 20.0% |
| !!! | TATCGTTTTTGACATATTTT+AGG | + | chr7.2:5248422-5248441 | None:intergenic | 20.0% |
| ! | AAAGAATGAGAAATATTGAG+AGG | + | chr7.2:5247223-5247242 | None:intergenic | 25.0% |
| ! | AAAGCTAACGTTTATGATTA+TGG | - | chr7.2:5247371-5247390 | MS.gene07004:intron | 25.0% |
| ! | AAGAATGAGAAATATTGAGA+GGG | + | chr7.2:5247222-5247241 | None:intergenic | 25.0% |
| ! | AATGTATAATTACCGAATGT+TGG | + | chr7.2:5248196-5248215 | None:intergenic | 25.0% |
| ! | ATAATGTGATTAATGTTGCT+GGG | - | chr7.2:5249374-5249393 | MS.gene07004:intron | 25.0% |
| ! | ATCAAAGGTTAAAATTCAAC+TGG | + | chr7.2:5250400-5250419 | None:intergenic | 25.0% |
| ! | ATGCTGAGTTTAATAATACT+GGG | - | chr7.2:5249440-5249459 | MS.gene07004:intron | 25.0% |
| ! | ATGTATAATTACCGAATGTT+GGG | + | chr7.2:5248195-5248214 | None:intergenic | 25.0% |
| ! | ATTAACAAGACTATTATCAC+TGG | - | chr7.2:5248130-5248149 | MS.gene07004:intron | 25.0% |
| ! | CGATAGAGGAAAAATAAATT+TGG | + | chr7.2:5250571-5250590 | None:intergenic | 25.0% |
| ! | CTAACAAAGGATTTAAAAAC+GGG | - | chr7.2:5247816-5247835 | MS.gene07004:intron | 25.0% |
| ! | CTACTCAATAATTGTGAAAA+GGG | + | chr7.2:5249860-5249879 | None:intergenic | 25.0% |
| ! | TATGCTGAGTTTAATAATAC+TGG | - | chr7.2:5249439-5249458 | MS.gene07004:intron | 25.0% |
| ! | TTTATACGTTTATGCACAAA+AGG | - | chr7.2:5248638-5248657 | MS.gene07004:CDS | 25.0% |
| !! | ATATTTTCTCCTTGTAAACT+TGG | + | chr7.2:5247590-5247609 | None:intergenic | 25.0% |
| !! | CACTTTGTTCTTTTTCTTTT+GGG | - | chr7.2:5249673-5249692 | MS.gene07004:intron | 25.0% |
| !! | TCACTTTGTTCTTTTTCTTT+TGG | - | chr7.2:5249672-5249691 | MS.gene07004:intron | 25.0% |
| !!! | AAGACTTTTTTGATGATGAT+TGG | - | chr7.2:5248100-5248119 | MS.gene07004:intron | 25.0% |
| !!! | AAGGACAACTTTTTTATATG+AGG | - | chr7.2:5250077-5250096 | MS.gene07004:CDS | 25.0% |
| !!! | ACTAACGGTTAATTTTAGTT+TGG | - | chr7.2:5250346-5250365 | MS.gene07004:CDS | 25.0% |
| AAGTTTCTTCCAAGTTTACA+AGG | - | chr7.2:5247578-5247597 | MS.gene07004:intron | 30.0% | |
| AATTCCAAACACTCTAACAA+AGG | - | chr7.2:5247803-5247822 | MS.gene07004:intron | 30.0% | |
| ATGTGAAGTTTAATCGATAG+AGG | + | chr7.2:5250585-5250604 | None:intergenic | 30.0% | |
| ATTGCTAGAAGCTAAATCAT+CGG | + | chr7.2:5249281-5249300 | None:intergenic | 30.0% | |
| CAGTTTGAAAAGAGTTTGAA+AGG | + | chr7.2:5247544-5247563 | None:intergenic | 30.0% | |
| GATAATGTGATTAATGTTGC+TGG | - | chr7.2:5249373-5249392 | MS.gene07004:intron | 30.0% | |
| GCTACTCAATAATTGTGAAA+AGG | + | chr7.2:5249861-5249880 | None:intergenic | 30.0% | |
| GGAACAGTAGATTTCATATT+CGG | - | chr7.2:5249112-5249131 | MS.gene07004:intron | 30.0% | |
| GGTTTACATGCAAACATTTA+TGG | - | chr7.2:5249351-5249370 | MS.gene07004:intron | 30.0% | |
| TACAGAGAATGTGACATTTA+TGG | - | chr7.2:5249091-5249110 | MS.gene07004:intron | 30.0% | |
| TAGTATCTAACTTAGACATC+AGG | + | chr7.2:5250466-5250485 | None:intergenic | 30.0% | |
| TCGCTAGAAACAGATTTATT+TGG | + | chr7.2:5248016-5248035 | None:intergenic | 30.0% | |
| TCTCTTGCTTTCTTTACTAA+AGG | - | chr7.2:5247743-5247762 | MS.gene07004:intron | 30.0% | |
| TGATTGAACAAGTCAATATC+CGG | + | chr7.2:5249932-5249951 | None:intergenic | 30.0% | |
| TGCTTTCTTTACTAAAGGTT+GGG | - | chr7.2:5247748-5247767 | MS.gene07004:intron | 30.0% | |
| TGTATAATTACCGAATGTTG+GGG | + | chr7.2:5248194-5248213 | None:intergenic | 30.0% | |
| TTATAGCACCTTCAATTCAA+TGG | - | chr7.2:5250234-5250253 | MS.gene07004:CDS | 30.0% | |
| TTGCTTAATTCAACATCTGT+CGG | + | chr7.2:5249770-5249789 | None:intergenic | 30.0% | |
| TTGCTTTAATTGTACAGTTG+TGG | + | chr7.2:5249258-5249277 | None:intergenic | 30.0% | |
| TTGCTTTCTTTACTAAAGGT+TGG | - | chr7.2:5247747-5247766 | MS.gene07004:intron | 30.0% | |
| TTTCATATTCGGAAATGCTA+AGG | - | chr7.2:5249123-5249142 | MS.gene07004:intron | 30.0% | |
| ! | AAATCCTTTGTTAGAGTGTT+TGG | + | chr7.2:5247810-5247829 | None:intergenic | 30.0% |
| ! | ATAGCATTTTCACAAAACAC+CGG | - | chr7.2:5247254-5247273 | MS.gene07004:intron | 30.0% |
| ! | GACTCTTTCTTTTTCTTCAA+TGG | - | chr7.2:5250284-5250303 | MS.gene07004:CDS | 30.0% |
| ! | GTTGGAGATATTTGTTGATT+AGG | + | chr7.2:5247445-5247464 | None:intergenic | 30.0% |
| ! | TACAAAGTAGTTATAGTGGA+AGG | + | chr7.2:5249705-5249724 | None:intergenic | 30.0% |
| ! | TTTTTGATCTATGTTACTGC+TGG | - | chr7.2:5248043-5248062 | MS.gene07004:intron | 30.0% |
| !! | AATAAATCTGTTTCTAGCGA+TGG | - | chr7.2:5248016-5248035 | MS.gene07004:intron | 30.0% |
| !! | AGAGTGTTTGGAATTTTGAA+AGG | + | chr7.2:5247798-5247817 | None:intergenic | 30.0% |
| !! | ATAAATCTGTTTCTAGCGAT+GGG | - | chr7.2:5248017-5248036 | MS.gene07004:intron | 30.0% |
| !! | ATGGAAAGAGTATTCTAGAA+CGG | - | chr7.2:5249330-5249349 | MS.gene07004:intron | 30.0% |
| !! | ATTCTAAAACAATGCAGGTT+AGG | - | chr7.2:5250694-5250713 | MS.gene07004:CDS | 30.0% |
| !! | ATTTTGAAAGGCGGTTTTAT+TGG | + | chr7.2:5247786-5247805 | None:intergenic | 30.0% |
| !! | TGACTATTCTAAAACAATGC+AGG | - | chr7.2:5250689-5250708 | MS.gene07004:CDS | 30.0% |
| !! | TGTAATTGTCTCGTTGATTT+GGG | - | chr7.2:5250717-5250736 | MS.gene07004:CDS | 30.0% |
| !!! | TCATAAACGTTAGCTTTTTG+AGG | + | chr7.2:5247368-5247387 | None:intergenic | 30.0% |
| !!! | TTTTTGATGATGATTGGAGA+TGG | - | chr7.2:5248106-5248125 | MS.gene07004:intron | 30.0% |
| AACCAACAAACATGTTTGGA+TGG | - | chr7.2:5247638-5247657 | MS.gene07004:intron | 35.0% | |
| AAGAGAGACACTATAGAGTT+TGG | + | chr7.2:5247729-5247748 | None:intergenic | 35.0% | |
| AATGTGTGTATAACGTGTCT+TGG | + | chr7.2:5249057-5249076 | None:intergenic | 35.0% | |
| AGATACACGTTCTTTGCAAA+TGG | + | chr7.2:5248876-5248895 | None:intergenic | 35.0% | |
| AGTGAACAAGTCAATACTAC+GGG | + | chr7.2:5250015-5250034 | None:intergenic | 35.0% | |
| ATTGAACAAGTCAATATCCG+GGG | + | chr7.2:5249930-5249949 | None:intergenic | 35.0% | |
| CGATTTATGAGTCAGTTAGT+CGG | - | chr7.2:5247873-5247892 | MS.gene07004:intron | 35.0% | |
| CTATCATGTGATTAATGCCA+CGG | - | chr7.2:5249501-5249520 | MS.gene07004:intron | 35.0% | |
| GACAAACCAACAAACATGTT+TGG | - | chr7.2:5247634-5247653 | MS.gene07004:intron | 35.0% | |
| GAGATAGGTGTAATTGGATT+TGG | + | chr7.2:5247287-5247306 | None:intergenic | 35.0% | |
| GAGTGAACAAGTCAATACTA+CGG | + | chr7.2:5250016-5250035 | None:intergenic | 35.0% | |
| GATTGAACAAGTCAATATCC+GGG | + | chr7.2:5249931-5249950 | None:intergenic | 35.0% | |
| GGTGCAGTTTCAACATATTT+GGG | - | chr7.2:5249301-5249320 | MS.gene07004:intron | 35.0% | |
| TAACCGTTAGTAAAAGCTGT+GGG | + | chr7.2:5250337-5250356 | None:intergenic | 35.0% | |
| TCAATACTACGGGGAATTAA+TGG | + | chr7.2:5250005-5250024 | None:intergenic | 35.0% | |
| TGGTGCAGTTTCAACATATT+TGG | - | chr7.2:5249300-5249319 | MS.gene07004:intron | 35.0% | |
| TTAAAGACACATCTTCAGCT+TGG | - | chr7.2:5247663-5247682 | MS.gene07004:intron | 35.0% | |
| TTAACCGTTAGTAAAAGCTG+TGG | + | chr7.2:5250338-5250357 | None:intergenic | 35.0% | |
| TTGAAAGGAAATCAGAGTTG+AGG | + | chr7.2:5247529-5247548 | None:intergenic | 35.0% | |
| TTTACAGTTGCAGTTTCGAA+GGG | - | chr7.2:5249029-5249048 | MS.gene07004:intron | 35.0% | |
| ! | AGAATGGATTTGCAATAGGT+TGG | + | chr7.2:5247341-5247360 | None:intergenic | 35.0% |
| ! | CTGTTGTCCTTTTGTGAAAA+TGG | - | chr7.2:5250521-5250540 | MS.gene07004:CDS | 35.0% |
| ! | GAATGGATTTGCAATAGGTT+GGG | + | chr7.2:5247340-5247359 | None:intergenic | 35.0% |
| ! | GATGATTTAGCTTCTAGCAA+TGG | - | chr7.2:5249280-5249299 | MS.gene07004:intron | 35.0% |
| ! | GATGCAACCATTTTCACAAA+AGG | + | chr7.2:5250531-5250550 | None:intergenic | 35.0% |
| ! | GTGGATAGAGGTTACAATTT+TGG | + | chr7.2:5249156-5249175 | None:intergenic | 35.0% |
| ! | GTGTAATTGTCTCGTTGATT+TGG | - | chr7.2:5250716-5250735 | MS.gene07004:CDS | 35.0% |
| ! | TTTTACAGTTGCAGTTTCGA+AGG | - | chr7.2:5249028-5249047 | MS.gene07004:intron | 35.0% |
| ! | TTTTATGAATGTTGCAGCTG+TGG | - | chr7.2:5248904-5248923 | MS.gene07004:CDS | 35.0% |
| !! | AATTGGATTTGGACTAGTAC+CGG | + | chr7.2:5247276-5247295 | None:intergenic | 35.0% |
| !! | AGTTTGGTGTCATTAGAAAG+TGG | + | chr7.2:5247713-5247732 | None:intergenic | 35.0% |
| !! | ATTTCTTGCTTGGTGATGAT+TGG | - | chr7.2:5249548-5249567 | MS.gene07004:intron | 35.0% |
| !! | CTCAACTTGAGTATTTTGAG+TGG | - | chr7.2:5250262-5250281 | MS.gene07004:CDS | 35.0% |
| !! | GTGTTTGGAATTTTGAAAGG+CGG | + | chr7.2:5247795-5247814 | None:intergenic | 35.0% |
| !! | GTTCTAGAATACTCTTTCCA+TGG | + | chr7.2:5249331-5249350 | None:intergenic | 35.0% |
| !!! | AAACGTTAGCTTTTTGAGGT+GGG | + | chr7.2:5247364-5247383 | None:intergenic | 35.0% |
| !!! | AAAGGCGGTTTTATTGGTTT+TGG | + | chr7.2:5247780-5247799 | None:intergenic | 35.0% |
| !!! | AAGGCGGTTTTATTGGTTTT+GGG | + | chr7.2:5247779-5247798 | None:intergenic | 35.0% |
| !!! | TAAACGTTAGCTTTTTGAGG+TGG | + | chr7.2:5247365-5247384 | None:intergenic | 35.0% |
| AGTTGTCCTTGCATGATGAA+AGG | + | chr7.2:5250067-5250086 | None:intergenic | 40.0% | |
| AGTTTGGACCAGTGAATGTT+GGG | - | chr7.2:5250362-5250381 | MS.gene07004:CDS | 40.0% | |
| ATGTGATTAATGTTGCTGGG+TGG | - | chr7.2:5249377-5249396 | MS.gene07004:intron | 40.0% | |
| CAACATATTTGGGAAGACCA+TGG | - | chr7.2:5249311-5249330 | MS.gene07004:intron | 40.0% | |
| CTAACTTAGACATCAGGTAG+TGG | + | chr7.2:5250460-5250479 | None:intergenic | 40.0% | |
| CTTCTTCAGAGTGATCAAGT+TGG | - | chr7.2:5247902-5247921 | MS.gene07004:intron | 40.0% | |
| GACCATCCAAACATGTTTGT+TGG | + | chr7.2:5247643-5247662 | None:intergenic | 40.0% | |
| GAGTTGCACCATTGAATTGA+AGG | + | chr7.2:5250245-5250264 | None:intergenic | 40.0% | |
| GAGTTTAATAATACTGGGCC+AGG | - | chr7.2:5249445-5249464 | MS.gene07004:intron | 40.0% | |
| GCATTGAATTGTCCACTCAT+TGG | + | chr7.2:5249184-5249203 | None:intergenic | 40.0% | |
| GTGAACAAGTCAATACTACG+GGG | + | chr7.2:5250014-5250033 | None:intergenic | 40.0% | |
| GTTGTCCTTGCATGATGAAA+GGG | + | chr7.2:5250066-5250085 | None:intergenic | 40.0% | |
| TAGTTTGGACCAGTGAATGT+TGG | - | chr7.2:5250361-5250380 | MS.gene07004:CDS | 40.0% | |
| TGTGAAAAGGGACAATCACA+CGG | + | chr7.2:5249848-5249867 | None:intergenic | 40.0% | |
| TGTGGTGAGAGATATTGTGA+CGG | - | chr7.2:5247934-5247953 | MS.gene07004:intron | 40.0% | |
| TTCAATGCAATCACTGCACA+AGG | - | chr7.2:5249196-5249215 | MS.gene07004:intron | 40.0% | |
| TTGAGTAGCAGTTTGTCTCT+TGG | - | chr7.2:5249872-5249891 | MS.gene07004:CDS | 40.0% | |
| TTTATGAGTCAGTTAGTCGG+AGG | - | chr7.2:5247876-5247895 | MS.gene07004:intron | 40.0% | |
| TTTCTCCCTTTCATCATGCA+AGG | - | chr7.2:5250058-5250077 | MS.gene07004:CDS | 40.0% | |
| ! | ATGATTGGTTGCCTCAAACA+GGG | - | chr7.2:5249563-5249582 | MS.gene07004:intron | 40.0% |
| ! | ATTGTGACGGTTAGTCAAGA+TGG | - | chr7.2:5247947-5247966 | MS.gene07004:intron | 40.0% |
| ! | ATTTGCAATAGGTTGGGTCA+GGG | + | chr7.2:5247334-5247353 | None:intergenic | 40.0% |
| ! | CACGGATGCAGCTAATTTTA+CGG | - | chr7.2:5249519-5249538 | MS.gene07004:intron | 40.0% |
| ! | GTTCCCACAGCTTTTACTAA+CGG | - | chr7.2:5250331-5250350 | MS.gene07004:CDS | 40.0% |
| ! | GTTTTGCTCGTCATCTTAAG+CGG | + | chr7.2:5247848-5247867 | None:intergenic | 40.0% |
| ! | TCAGCTTGGAGTTTTCGAAA+TGG | - | chr7.2:5247677-5247696 | MS.gene07004:intron | 40.0% |
| ! | TGGGAGAATGGATTTGCAAT+AGG | + | chr7.2:5247345-5247364 | None:intergenic | 40.0% |
| !! | TGAGAGGGTATTACATAGCT+TGG | + | chr7.2:5247207-5247226 | None:intergenic | 40.0% |
| AAGCAGTGGCACTTAGAAAC+GGG | - | chr7.2:5248990-5249009 | MS.gene07004:CDS | 45.0% | |
| ACAGATCCTAACCAAGACAC+AGG | - | chr7.2:5249223-5249242 | MS.gene07004:intron | 45.0% | |
| ACGGTGGCAAATTTCTTGCT+TGG | - | chr7.2:5249538-5249557 | MS.gene07004:intron | 45.0% | |
| AGGACAACAGTACTACTGTG+CGG | + | chr7.2:5250511-5250530 | None:intergenic | 45.0% | |
| AGTTGAACCCCAACATTCAC+TGG | + | chr7.2:5250373-5250392 | None:intergenic | 45.0% | |
| ATGAATGTTGCAGCTGTGGT+TGG | - | chr7.2:5248908-5248927 | MS.gene07004:CDS | 45.0% | |
| ATTGTGGGGCTCACACATAA+TGG | - | chr7.2:5248368-5248387 | MS.gene07004:intron | 45.0% | |
| CAAGCAGTGGCACTTAGAAA+CGG | - | chr7.2:5248989-5249008 | MS.gene07004:CDS | 45.0% | |
| CCAATTACACCTATCTCACC+AGG | - | chr7.2:5247290-5247309 | MS.gene07004:intron | 45.0% | |
| CCTGGTGAGATAGGTGTAAT+TGG | + | chr7.2:5247293-5247312 | None:intergenic | 45.0% | |
| CGTAAAATTAGCTGCATCCG+TGG | + | chr7.2:5249521-5249540 | None:intergenic | 45.0% | |
| GATGTACCTGTGTCTTGGTT+AGG | + | chr7.2:5249232-5249251 | None:intergenic | 45.0% | |
| GGATTGATGTACCTGTGTCT+TGG | + | chr7.2:5249237-5249256 | None:intergenic | 45.0% | |
| GTGAATGTTGGGGTTCAACT+TGG | - | chr7.2:5250373-5250392 | MS.gene07004:CDS | 45.0% | |
| GTTTGGACCAGTGAATGTTG+GGG | - | chr7.2:5250363-5250382 | MS.gene07004:CDS | 45.0% | |
| TATCCACGTCTTCCAATGAG+TGG | - | chr7.2:5249169-5249188 | MS.gene07004:intron | 45.0% | |
| TCATTGGAAGACGTGGATAG+AGG | + | chr7.2:5249168-5249187 | None:intergenic | 45.0% | |
| TGAATGTTGCAGCTGTGGTT+GGG | - | chr7.2:5248909-5248928 | MS.gene07004:CDS | 45.0% | |
| ! | ACGGTTAGTCAAGATGGAAG+TGG | - | chr7.2:5247953-5247972 | MS.gene07004:intron | 45.0% |
| ! | GATGATTGGTTGCCTCAAAC+AGG | - | chr7.2:5249562-5249581 | MS.gene07004:intron | 45.0% |
| ! | GATTTGCAATAGGTTGGGTC+AGG | + | chr7.2:5247335-5247354 | None:intergenic | 45.0% |
| ! | GGATGCAGCTAATTTTACGG+TGG | - | chr7.2:5249522-5249541 | MS.gene07004:intron | 45.0% |
| ! | GGCAATCACAGTGTTGTTGA+TGG | - | chr7.2:5248151-5248170 | MS.gene07004:intron | 45.0% |
| ! | TGATTGGTTGCCTCAAACAG+GGG | - | chr7.2:5249564-5249583 | MS.gene07004:intron | 45.0% |
| ! | TTTGCAATAGGTTGGGTCAG+GGG | + | chr7.2:5247333-5247352 | None:intergenic | 45.0% |
| !! | ATCACAGTGTTGTTGATGGC+TGG | - | chr7.2:5248155-5248174 | MS.gene07004:intron | 45.0% |
| !! | TCAAGTTGGTGAGGATGTTG+TGG | - | chr7.2:5247916-5247935 | MS.gene07004:intron | 45.0% |
| !! | TCAGAGTGATCAAGTTGGTG+AGG | - | chr7.2:5247907-5247926 | MS.gene07004:intron | 45.0% |
| !!! | AGCTTTTTGAGGTGGGAGAA+TGG | + | chr7.2:5247357-5247376 | None:intergenic | 45.0% |
| !! | ATAATATTAATTAATATGAA+CGG | - | chr7.2:5250420-5250439 | MS.gene07004:CDS | 5.0% |
| !! | ATTAATTAATATTATATCAA+AGG | + | chr7.2:5250415-5250434 | None:intergenic | 5.0% |
| !!! | TTTTTTTTATAATATTTTAC+AGG | + | chr7.2:5248750-5248769 | None:intergenic | 5.0% |
| ACATTCGGCTCCCCAACATT+CGG | - | chr7.2:5248181-5248200 | MS.gene07004:intron | 50.0% | |
| AGCAGTGGCACTTAGAAACG+GGG | - | chr7.2:5248991-5249010 | MS.gene07004:CDS | 50.0% | |
| ATCTTGTAGTGCTCGCACAG+CGG | + | chr7.2:5247489-5247508 | None:intergenic | 50.0% | |
| ATGACCATCCGTAACACAGC+AGG | - | chr7.2:5248953-5248972 | MS.gene07004:CDS | 50.0% | |
| GAATCGCGCTGAGCAATGTT+TGG | + | chr7.2:5247613-5247632 | None:intergenic | 50.0% | |
| GGACAACAGTACTACTGTGC+GGG | + | chr7.2:5250510-5250529 | None:intergenic | 50.0% | |
| GTGTAAGACACCCCTGTTTG+AGG | + | chr7.2:5249577-5249596 | None:intergenic | 50.0% | |
| TCACAGCACCTGCTGTGTTA+CGG | + | chr7.2:5248964-5248983 | None:intergenic | 50.0% | |
| TGTCCACTCATTGGAAGACG+TGG | + | chr7.2:5249175-5249194 | None:intergenic | 50.0% | |
| ! | CAGCTTTTGTGCATCAACCC+CGG | - | chr7.2:5249910-5249929 | MS.gene07004:CDS | 50.0% |
| ! | CGTTTCTAAGTGCCACTGCT+TGG | + | chr7.2:5248991-5249010 | None:intergenic | 50.0% |
| ! | TGGGGCTCACACATAATGGA+GGG | - | chr7.2:5248372-5248391 | MS.gene07004:intron | 50.0% |
| !! | GTTGATGGCTGGACCACATT+CGG | - | chr7.2:5248166-5248185 | MS.gene07004:intron | 50.0% |
| AGCACCTGCTGTGTTACGGA+TGG | + | chr7.2:5248960-5248979 | None:intergenic | 55.0% | |
| AGTTGAGGTCGCTGAGCGAT+TGG | + | chr7.2:5247514-5247533 | None:intergenic | 55.0% | |
| CATGCTGCTCCTGGTGAGAT+AGG | + | chr7.2:5247302-5247321 | None:intergenic | 55.0% | |
| CTACCATCAGTGCTAGAGCC+TGG | + | chr7.2:5249466-5249485 | None:intergenic | 55.0% | |
| GAATGTTGGGGAGCCGAATG+TGG | + | chr7.2:5248182-5248201 | None:intergenic | 55.0% | |
| GATGGTAGAGTGACGTGGCA+AGG | - | chr7.2:5249478-5249497 | MS.gene07004:intron | 55.0% | |
| GTGGATTTGCATGCTGCTCC+TGG | + | chr7.2:5247311-5247330 | None:intergenic | 55.0% | |
| GTGGGGCTCACACATAATGG+AGG | - | chr7.2:5248371-5248390 | MS.gene07004:intron | 55.0% | |
| GTGGTTGGGCAAGGATTCGT+GGG | - | chr7.2:5248923-5248942 | MS.gene07004:CDS | 55.0% | |
| TGGAAAGAGTGGAGCGACGT+TGG | + | chr7.2:5247463-5247482 | None:intergenic | 55.0% | |
| TGTGCGGGCAGTCTTAGAGT+AGG | + | chr7.2:5250495-5250514 | None:intergenic | 55.0% | |
| TGTGGTTGGGCAAGGATTCG+TGG | - | chr7.2:5248922-5248941 | MS.gene07004:CDS | 55.0% | |
| ! | GCACTGATGGTAGAGTGACG+TGG | - | chr7.2:5249473-5249492 | MS.gene07004:intron | 55.0% |
| ! | TGCTGTGAAGCACCAAGCAG+TGG | - | chr7.2:5248976-5248995 | MS.gene07004:CDS | 55.0% |
| ATGTTGCTGGGTGGCGTGCT+TGG | - | chr7.2:5249386-5249405 | MS.gene07004:intron | 60.0% | |
| GTTGCAGCTGTGGTTGGGCA+AGG | - | chr7.2:5248914-5248933 | MS.gene07004:CDS | 60.0% | |
| TGTTGCTGGGTGGCGTGCTT+GGG | - | chr7.2:5249387-5249406 | MS.gene07004:intron | 60.0% | |
| TTGTAGTGCTCGCACAGCGG+TGG | + | chr7.2:5247486-5247505 | None:intergenic | 60.0% | |
| ! | GCAATAGGTTGGGTCAGGGG+TGG | + | chr7.2:5247330-5247349 | None:intergenic | 60.0% |
| !! | CACAGCGGTGGTGGAAAGAG+TGG | + | chr7.2:5247474-5247493 | None:intergenic | 60.0% |
| TAGTGCTCGCACAGCGGTGG+TGG | + | chr7.2:5247483-5247502 | None:intergenic | 65.0% | |
| ! | GGGCCAGGCTCTAGCACTGA+TGG | - | chr7.2:5249460-5249479 | MS.gene07004:intron | 65.0% |
| GCTGGGTGGCGTGCTTGGGA+TGG | - | chr7.2:5249391-5249410 | MS.gene07004:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 5247197 | 5250746 | 5247197 | ID=MS.gene07004 |
| chr7.2 | mRNA | 5247197 | 5250746 | 5247197 | ID=MS.gene07004.t1;Parent=MS.gene07004 |
| chr7.2 | exon | 5249741 | 5250746 | 5249741 | ID=MS.gene07004.t1.exon1;Parent=MS.gene07004.t1 |
| chr7.2 | CDS | 5249741 | 5250746 | 5249741 | ID=cds.MS.gene07004.t1;Parent=MS.gene07004.t1 |
| chr7.2 | exon | 5248436 | 5249022 | 5248436 | ID=MS.gene07004.t1.exon2;Parent=MS.gene07004.t1 |
| chr7.2 | CDS | 5248436 | 5249022 | 5248436 | ID=cds.MS.gene07004.t1;Parent=MS.gene07004.t1 |
| chr7.2 | exon | 5247197 | 5247232 | 5247197 | ID=MS.gene07004.t1.exon3;Parent=MS.gene07004.t1 |
| chr7.2 | CDS | 5247197 | 5247232 | 5247197 | ID=cds.MS.gene07004.t1;Parent=MS.gene07004.t1 |
| Gene Sequence |
| Protein sequence |
