Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91977.t1 | AAB41556.1 | 98.7 | 312 | 4 | 0 | 1 | 312 | 1 | 312 | 3.20E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91977.t1 | P26690 | 84.8 | 310 | 47 | 0 | 3 | 312 | 4 | 313 | 2.4e-154 | 546.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91977.t1 | Q40310 | 98.7 | 312 | 4 | 0 | 1 | 312 | 1 | 312 | 2.3e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene91977 | -0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene91977 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene91977 | -0.806109 | 9.65E-50 | -1.69E-46 |
| MS.gene049483 | MS.gene91977 | 0.825602 | 4.29E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene91977 | 0.811208 | 7.85E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene91977 | -0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene91977 | -0.827545 | 1.47E-54 | -1.69E-46 |
| MS.gene050354 | MS.gene91977 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene91977 | 0.827389 | 1.61E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene91977 | 0.874483 | 6.52E-68 | -1.69E-46 |
| MS.gene050381 | MS.gene91977 | 0.914501 | 1.78E-84 | -1.69E-46 |
| MS.gene050504 | MS.gene91977 | -0.841642 | 4.20E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene91977 | -0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene91977 | -0.828124 | 1.07E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene91977 | -0.833335 | 5.66E-56 | -1.69E-46 |
| MS.gene050883 | MS.gene91977 | 0.887857 | 9.87E-73 | -1.69E-46 |
| MS.gene050926 | MS.gene91977 | 0.802822 | 4.68E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene91977 | -0.806257 | 8.98E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene91977 | 0.83902 | 2.03E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene91977 | 0.879208 | 1.50E-69 | -1.69E-46 |
| MS.gene05141 | MS.gene91977 | 0.840901 | 6.58E-58 | -1.69E-46 |
| MS.gene051509 | MS.gene91977 | -0.800252 | 1.57E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene91977 | -0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene91977 | 0.878643 | 2.38E-69 | -1.69E-46 |
| MS.gene052164 | MS.gene91977 | -0.843602 | 1.27E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene91977 | -0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene91977 | -0.823591 | 1.28E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene91977 | -0.810289 | 1.24E-50 | -1.69E-46 |
| MS.gene053069 | MS.gene91977 | 0.802574 | 5.26E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene91977 | -0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene91977 | 0.848088 | 7.66E-60 | -1.69E-46 |
| MS.gene053436 | MS.gene91977 | -0.810994 | 8.74E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene91977 | 0.817812 | 2.72E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene91977 | 0.843644 | 1.23E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene91977 | 0.832519 | 9.03E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene91977 | -0.811799 | 5.84E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene91977 | -0.813088 | 3.05E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene91977 | 0.829304 | 5.55E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene91977 | -0.827608 | 1.42E-54 | -1.69E-46 |
| MS.gene054054 | MS.gene91977 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene91977 | 0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene91977 | -0.831125 | 1.99E-55 | -1.69E-46 |
| MS.gene054616 | MS.gene91977 | 0.820405 | 6.98E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene91977 | 0.810747 | 9.89E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene91977 | 0.808444 | 3.09E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene91977 | 0.863351 | 2.65E-64 | -1.69E-46 |
| MS.gene055124 | MS.gene91977 | 0.876709 | 1.13E-68 | -1.69E-46 |
| MS.gene055139 | MS.gene91977 | 0.855627 | 5.56E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene91977 | 0.864642 | 1.05E-64 | -1.69E-46 |
| MS.gene055202 | MS.gene91977 | 0.841355 | 5.00E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene91977 | -0.813875 | 2.05E-51 | -1.69E-46 |
| MS.gene055401 | MS.gene91977 | 0.829784 | 4.24E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene91977 | -0.823384 | 1.43E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene91977 | -0.812499 | 4.11E-51 | -1.69E-46 |
| MS.gene055629 | MS.gene91977 | -0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene91977 | -0.806551 | 7.79E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene91977 | -0.807929 | 3.98E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene91977 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene91977 | -0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene91977 | 0.829858 | 4.07E-55 | -1.69E-46 |
| MS.gene056310 | MS.gene91977 | 0.893713 | 4.86E-75 | -1.69E-46 |
| MS.gene056311 | MS.gene91977 | 0.876483 | 1.35E-68 | -1.69E-46 |
| MS.gene056313 | MS.gene91977 | 0.920951 | 6.67E-88 | -1.69E-46 |
| MS.gene056408 | MS.gene91977 | 0.840102 | 1.06E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene91977 | -0.830531 | 2.79E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene91977 | -0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene056647 | MS.gene91977 | 0.813073 | 3.08E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene91977 | 0.855733 | 5.17E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene91977 | -0.801422 | 9.07E-49 | -1.69E-46 |
| MS.gene057291 | MS.gene91977 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene057293 | MS.gene91977 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene057473 | MS.gene91977 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene057506 | MS.gene91977 | 0.824934 | 6.17E-54 | -1.69E-46 |
| MS.gene057770 | MS.gene91977 | 0.821725 | 3.47E-53 | -1.69E-46 |
| MS.gene058041 | MS.gene91977 | -0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene91977 | 0.818032 | 2.42E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene91977 | 0.843815 | 1.11E-58 | -1.69E-46 |
| MS.gene058108 | MS.gene91977 | 0.867244 | 1.58E-65 | -1.69E-46 |
| MS.gene058109 | MS.gene91977 | 0.866057 | 3.77E-65 | -1.69E-46 |
| MS.gene058111 | MS.gene91977 | 0.837102 | 6.33E-57 | -1.69E-46 |
| MS.gene058117 | MS.gene91977 | 0.816509 | 5.33E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene91977 | -0.833683 | 4.63E-56 | -1.69E-46 |
| MS.gene058170 | MS.gene91977 | 0.870108 | 1.87E-66 | -1.69E-46 |
| MS.gene058171 | MS.gene91977 | 0.896566 | 3.26E-76 | -1.69E-46 |
| MS.gene058172 | MS.gene91977 | 0.842972 | 1.87E-58 | -1.69E-46 |
| MS.gene058173 | MS.gene91977 | 0.888489 | 5.64E-73 | -1.69E-46 |
| MS.gene058174 | MS.gene91977 | 0.873007 | 2.05E-67 | -1.69E-46 |
| MS.gene058175 | MS.gene91977 | 0.894945 | 1.53E-75 | -1.69E-46 |
| MS.gene058176 | MS.gene91977 | 0.818037 | 2.42E-52 | -1.69E-46 |
| MS.gene058179 | MS.gene91977 | 0.848384 | 6.34E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene91977 | 0.851221 | 1.02E-60 | -1.69E-46 |
| MS.gene058269 | MS.gene91977 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene91977 | -0.840488 | 8.44E-58 | -1.69E-46 |
| MS.gene058420 | MS.gene91977 | -0.824034 | 1.00E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene91977 | 0.821446 | 4.02E-53 | -1.69E-46 |
| MS.gene058630 | MS.gene91977 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene91977 | 0.826856 | 2.16E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene91977 | -0.831949 | 1.25E-55 | -1.69E-46 |
| MS.gene059037 | MS.gene91977 | 0.851972 | 6.27E-61 | -1.69E-46 |
| MS.gene059044 | MS.gene91977 | 0.818909 | 1.53E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene91977 | 0.850434 | 1.70E-60 | -1.69E-46 |
| MS.gene059052 | MS.gene91977 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene91977 | 0.8535 | 2.29E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene91977 | -0.846901 | 1.62E-59 | -1.69E-46 |
| MS.gene059368 | MS.gene91977 | -0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene91977 | -0.80015 | 1.65E-48 | -1.69E-46 |
| MS.gene059690 | MS.gene91977 | 0.810121 | 1.35E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene91977 | 0.817317 | 3.51E-52 | -1.69E-46 |
| MS.gene059697 | MS.gene91977 | 0.828718 | 7.69E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene91977 | -0.810611 | 1.06E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene91977 | -0.830499 | 2.84E-55 | -1.69E-46 |
| MS.gene059916 | MS.gene91977 | 0.819915 | 9.04E-53 | -1.69E-46 |
| MS.gene059943 | MS.gene91977 | 0.814486 | 1.50E-51 | -1.69E-46 |
| MS.gene059944 | MS.gene91977 | 0.830151 | 3.45E-55 | -1.69E-46 |
| MS.gene060187 | MS.gene91977 | 0.839789 | 1.28E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene91977 | -0.857766 | 1.31E-62 | -1.69E-46 |
| MS.gene060593 | MS.gene91977 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene91977 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene91977 | -0.834922 | 2.26E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene91977 | -0.849796 | 2.57E-60 | -1.69E-46 |
| MS.gene060808 | MS.gene91977 | 0.806547 | 7.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91977 | MS.gene97980 | PPI |
| MS.gene91977 | MS.gene97981 | PPI |
| MS.gene91977 | MS.gene056487 | PPI |
| MS.gene91977 | MS.gene062932 | PPI |
| MS.gene91977 | MS.gene50700 | PPI |
| MS.gene91977 | MS.gene008793 | PPI |
| MS.gene91977 | MS.gene42873 | PPI |
| MS.gene91977 | MS.gene87111 | PPI |
| MS.gene91977 | MS.gene23359 | PPI |
| MS.gene040151 | MS.gene91977 | PPI |
| MS.gene91977 | MS.gene040151 | PPI |
| MS.gene91977 | MS.gene53169 | PPI |
| MS.gene91977 | MS.gene72560 | PPI |
| MS.gene91977 | MS.gene024362 | PPI |
| MS.gene91977 | MS.gene91446 | PPI |
| MS.gene91977 | MS.gene008794 | PPI |
| MS.gene91977 | MS.gene95889 | PPI |
| MS.gene91977 | MS.gene54933 | PPI |
| MS.gene91977 | MS.gene98697 | PPI |
| MS.gene91977 | MS.gene93059 | PPI |
| MS.gene91977 | MS.gene93783 | PPI |
| MS.gene91977 | MS.gene93058 | PPI |
| MS.gene91977 | MS.gene55382 | PPI |
| MS.gene91977 | MS.gene99693 | PPI |
| MS.gene91977 | MS.gene003638 | PPI |
| MS.gene91977 | MS.gene42146 | PPI |
| MS.gene91977 | MS.gene056488 | PPI |
| MS.gene91977 | MS.gene62620 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91977.t1 | MTR_5g097900 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 632 |
| MS.gene91977.t1 | MTR_5g097910 | 97.436 | 312 | 8 | 0 | 1 | 312 | 1 | 312 | 0.0 | 631 |
| MS.gene91977.t1 | MTR_5g097940 | 97.436 | 312 | 8 | 0 | 1 | 312 | 1 | 312 | 0.0 | 631 |
| MS.gene91977.t1 | MTR_3g083130 | 67.857 | 308 | 98 | 1 | 6 | 312 | 7 | 314 | 4.49e-162 | 454 |
| MS.gene91977.t1 | MTR_0374s0050 | 62.951 | 305 | 110 | 3 | 1 | 302 | 1 | 305 | 1.82e-138 | 394 |
| MS.gene91977.t1 | MTR_4g072320 | 51.839 | 299 | 134 | 4 | 1 | 297 | 1 | 291 | 5.68e-101 | 299 |
| MS.gene91977.t1 | MTR_4g072350 | 49.371 | 318 | 146 | 6 | 5 | 311 | 5 | 318 | 8.10e-100 | 296 |
| MS.gene91977.t1 | MTR_4g072360 | 49.333 | 300 | 146 | 4 | 1 | 297 | 1 | 297 | 1.08e-98 | 293 |
| MS.gene91977.t1 | MTR_6g073110 | 50.000 | 302 | 147 | 4 | 1 | 300 | 1 | 300 | 1.53e-98 | 293 |
| MS.gene91977.t1 | MTR_8g070095 | 42.606 | 284 | 160 | 2 | 19 | 300 | 15 | 297 | 4.02e-75 | 233 |
| MS.gene91977.t1 | MTR_4g036845 | 41.053 | 285 | 163 | 4 | 18 | 300 | 12 | 293 | 1.17e-71 | 224 |
| MS.gene91977.t1 | MTR_7g063580 | 43.015 | 272 | 143 | 3 | 49 | 311 | 83 | 351 | 1.26e-70 | 223 |
| MS.gene91977.t1 | MTR_8g070115 | 43.056 | 288 | 153 | 4 | 19 | 302 | 15 | 295 | 3.60e-70 | 220 |
| MS.gene91977.t1 | MTR_4g021350 | 43.206 | 287 | 148 | 5 | 19 | 300 | 15 | 291 | 6.43e-66 | 209 |
| MS.gene91977.t1 | MTR_4g021410 | 41.967 | 305 | 149 | 6 | 19 | 312 | 16 | 303 | 4.82e-65 | 207 |
| MS.gene91977.t1 | MTR_4g021350 | 43.060 | 281 | 145 | 5 | 19 | 294 | 15 | 285 | 1.10e-63 | 203 |
| MS.gene91977.t1 | MTR_4g021410 | 42.857 | 273 | 136 | 4 | 48 | 312 | 6 | 266 | 1.49e-61 | 197 |
| MS.gene91977.t1 | MTR_4g021450 | 42.553 | 282 | 148 | 3 | 19 | 300 | 16 | 283 | 3.23e-61 | 197 |
| MS.gene91977.t1 | MTR_7g070500 | 38.214 | 280 | 165 | 5 | 20 | 298 | 23 | 295 | 1.09e-58 | 191 |
| MS.gene91977.t1 | MTR_4g072060 | 39.145 | 304 | 170 | 6 | 18 | 310 | 9 | 308 | 1.62e-58 | 190 |
| MS.gene91977.t1 | MTR_7g070500 | 38.686 | 274 | 160 | 5 | 20 | 292 | 23 | 289 | 3.82e-58 | 189 |
| MS.gene91977.t1 | MTR_4g021410 | 41.841 | 239 | 119 | 4 | 82 | 312 | 1 | 227 | 1.24e-47 | 159 |
| MS.gene91977.t1 | MTR_4g021450 | 42.922 | 219 | 113 | 2 | 82 | 300 | 1 | 207 | 9.15e-45 | 152 |
| MS.gene91977.t1 | MTR_4g021450 | 43.038 | 158 | 87 | 1 | 143 | 300 | 10 | 164 | 7.88e-39 | 135 |
| MS.gene91977.t1 | MTR_6g072650 | 43.537 | 147 | 47 | 5 | 176 | 311 | 13 | 134 | 5.11e-27 | 103 |
| MS.gene91977.t1 | MTR_6g072710 | 45.133 | 113 | 57 | 2 | 191 | 300 | 1 | 111 | 3.44e-25 | 97.8 |
| MS.gene91977.t1 | MTR_3g449790 | 26.712 | 292 | 148 | 10 | 34 | 285 | 73 | 338 | 8.67e-18 | 83.2 |
| MS.gene91977.t1 | MTR_3g449790 | 26.174 | 298 | 148 | 11 | 34 | 285 | 73 | 344 | 1.64e-16 | 79.7 |
| MS.gene91977.t1 | MTR_7g114990 | 25.347 | 288 | 151 | 11 | 41 | 289 | 52 | 314 | 9.93e-13 | 68.2 |
| MS.gene91977.t1 | MTR_7g021850 | 25.087 | 287 | 161 | 9 | 41 | 292 | 43 | 310 | 4.00e-12 | 66.2 |
| MS.gene91977.t1 | MTR_1g102750 | 23.301 | 309 | 166 | 10 | 24 | 289 | 29 | 309 | 9.82e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91977.t1 | AT1G59960 | 53.571 | 308 | 132 | 6 | 1 | 300 | 1 | 305 | 3.93e-113 | 330 |
| MS.gene91977.t1 | AT1G59950 | 55.556 | 288 | 118 | 5 | 20 | 300 | 15 | 299 | 1.94e-105 | 311 |
| MS.gene91977.t1 | AT2G37770 | 44.406 | 286 | 148 | 4 | 19 | 300 | 15 | 293 | 1.34e-77 | 239 |
| MS.gene91977.t1 | AT2G37790 | 43.357 | 286 | 151 | 4 | 19 | 300 | 15 | 293 | 9.31e-77 | 237 |
| MS.gene91977.t1 | AT5G62420 | 44.014 | 284 | 153 | 4 | 20 | 300 | 14 | 294 | 2.17e-75 | 234 |
| MS.gene91977.t1 | AT5G01670 | 42.606 | 284 | 154 | 6 | 19 | 300 | 23 | 299 | 8.48e-74 | 230 |
| MS.gene91977.t1 | AT2G37760 | 43.662 | 284 | 147 | 4 | 19 | 299 | 15 | 288 | 7.42e-73 | 226 |
| MS.gene91977.t1 | AT2G37760 | 43.662 | 284 | 147 | 4 | 19 | 299 | 15 | 288 | 7.42e-73 | 226 |
| MS.gene91977.t1 | AT2G37760 | 44.128 | 281 | 144 | 4 | 19 | 296 | 15 | 285 | 5.26e-72 | 224 |
| MS.gene91977.t1 | AT2G37760 | 43.463 | 283 | 147 | 4 | 19 | 298 | 15 | 287 | 3.45e-71 | 223 |
| MS.gene91977.t1 | AT2G37760 | 43.463 | 283 | 147 | 4 | 19 | 298 | 15 | 287 | 3.45e-71 | 223 |
| MS.gene91977.t1 | AT3G53880 | 41.696 | 283 | 160 | 3 | 19 | 300 | 15 | 293 | 2.01e-69 | 219 |
| MS.gene91977.t1 | AT5G01670 | 38.907 | 311 | 154 | 7 | 19 | 300 | 23 | 326 | 7.48e-68 | 216 |
| MS.gene91977.t1 | AT3G53880 | 41.786 | 280 | 152 | 4 | 19 | 294 | 15 | 287 | 4.82e-67 | 213 |
| MS.gene91977.t1 | AT2G21260 | 39.100 | 289 | 161 | 6 | 18 | 295 | 9 | 293 | 1.29e-66 | 211 |
| MS.gene91977.t1 | AT2G21250 | 37.829 | 304 | 174 | 6 | 18 | 310 | 9 | 308 | 3.09e-65 | 207 |
| MS.gene91977.t1 | AT2G37760 | 43.333 | 240 | 129 | 3 | 62 | 298 | 6 | 241 | 1.46e-58 | 189 |
| MS.gene91977.t1 | AT2G37760 | 43.333 | 240 | 129 | 3 | 62 | 298 | 6 | 241 | 1.46e-58 | 189 |
| MS.gene91977.t1 | AT2G37770 | 47.716 | 197 | 93 | 3 | 19 | 212 | 15 | 204 | 1.60e-54 | 179 |
| MS.gene91977.t1 | AT2G21250 | 41.429 | 210 | 112 | 5 | 15 | 217 | 6 | 211 | 2.26e-47 | 159 |
| MS.gene91977.t1 | AT2G21260 | 34.545 | 220 | 131 | 5 | 87 | 295 | 8 | 225 | 1.41e-40 | 142 |
| MS.gene91977.t1 | AT1G06690 | 27.397 | 292 | 144 | 10 | 35 | 282 | 85 | 352 | 9.30e-20 | 89.0 |
| MS.gene91977.t1 | AT1G60680 | 26.888 | 331 | 175 | 16 | 15 | 300 | 14 | 322 | 1.26e-15 | 77.0 |
| MS.gene91977.t1 | AT5G53580 | 24.211 | 285 | 161 | 9 | 44 | 290 | 80 | 347 | 5.09e-15 | 75.1 |
| MS.gene91977.t1 | AT1G60690 | 24.768 | 323 | 168 | 14 | 25 | 300 | 27 | 321 | 1.63e-11 | 64.7 |
| MS.gene91977.t1 | AT1G60750 | 25.532 | 282 | 160 | 12 | 44 | 300 | 50 | 306 | 1.82e-11 | 64.3 |
Find 64 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAAGATACGCAAATTT+TGG | 0.165725 | 5.2:+82433286 | None:intergenic |
| TTGCATTGCAAAACTCTCTA+AGG | 0.274401 | 5.2:+82433502 | None:intergenic |
| ATTGGAAATGAAAACTTTCC+AGG | 0.287256 | 5.2:+82433813 | None:intergenic |
| TGGACTTGTACTTGATTCAT+TGG | 0.300645 | 5.2:-82433851 | MS.gene91977:CDS |
| GTGTCTATAACCTTGTTTGA+TGG | 0.333209 | 5.2:+82434295 | None:intergenic |
| AAAATTTGCGTATCTTTGAT+TGG | 0.369647 | 5.2:-82433284 | MS.gene91977:CDS |
| TCTTTCTTACATGTGAAGTC+AGG | 0.371382 | 5.2:+82434341 | None:intergenic |
| CATTTGATGTGAAAGGTGTT+TGG | 0.375654 | 5.2:-82433770 | MS.gene91977:CDS |
| CTTGGACTCACTAAAGCTAT+TGG | 0.375778 | 5.2:-82433723 | MS.gene91977:CDS |
| CAAACACCTTTCACATCAAA+TGG | 0.378027 | 5.2:+82433771 | None:intergenic |
| AAGAGATCTGCCACATCAAT+TGG | 0.378807 | 5.2:+82433795 | None:intergenic |
| AGTCCAGGCTTGGTTGGTCC+AGG | 0.384417 | 5.2:+82433204 | None:intergenic |
| TCATTCTCCATAACCTCATT+TGG | 0.392662 | 5.2:+82433426 | None:intergenic |
| TTTGATACTGCTGCTGCATA+TGG | 0.396016 | 5.2:-82434272 | MS.gene91977:CDS |
| CTGCTTGCACCTTTCCTCAA+TGG | 0.400054 | 5.2:+82433453 | None:intergenic |
| AGGCATCTTCAGTTGATTAG+AGG | 0.404627 | 5.2:+82434385 | None:intergenic |
| CAGAGGACCAAATGAGGTTA+TGG | 0.408273 | 5.2:-82433433 | MS.gene91977:CDS |
| ATCCCTGGACCAACCAAGCC+TGG | 0.412790 | 5.2:-82433207 | MS.gene91977:CDS |
| ATTTGATGTGAAAGGTGTTT+GGG | 0.418218 | 5.2:-82433769 | MS.gene91977:CDS |
| TCTTTCCTTATCATAGCTCT+TGG | 0.419142 | 5.2:+82433314 | None:intergenic |
| TTGAAAGAGGCCATTGAACT+TGG | 0.422526 | 5.2:-82434224 | MS.gene91977:CDS |
| TGTTCCCAAGAGCTATGATA+AGG | 0.425757 | 5.2:-82433319 | MS.gene91977:CDS |
| CTTTCCTTATCATAGCTCTT+GGG | 0.433848 | 5.2:+82433315 | None:intergenic |
| AAGCAAAATCGTTTGATCCC+TGG | 0.455139 | 5.2:-82433222 | MS.gene91977:CDS |
| AAAGTTTAGAAGTAACAAAA+AGG | 0.467615 | 5.2:+82434183 | None:intergenic |
| GACTCTTCAACTAGACTACT+TGG | 0.469433 | 5.2:-82433871 | MS.gene91977:CDS |
| CTTCAGTTGATTAGAGGTGT+TGG | 0.475812 | 5.2:+82434391 | None:intergenic |
| TGTTGGTAAGAACCTTTGTT+GGG | 0.483158 | 5.2:+82434408 | None:intergenic |
| AAGTTTCAAGCTTTCCTCCA+TGG | 0.483539 | 5.2:+82433743 | None:intergenic |
| TATGGCTCAGAACAAGCTCT+TGG | 0.491850 | 5.2:-82434254 | MS.gene91977:CDS |
| ATGGAGGAAAGCTTGAAACT+TGG | 0.498400 | 5.2:-82433741 | MS.gene91977:CDS |
| TTGCACAAATATCTCTAAGA+TGG | 0.499975 | 5.2:-82433365 | MS.gene91977:CDS |
| TCTTGGAGAGGCTTTGAAAG+AGG | 0.506147 | 5.2:-82434237 | MS.gene91977:CDS |
| CTTTCTTACATGTGAAGTCA+GGG | 0.506502 | 5.2:+82434342 | None:intergenic |
| CTCTTACCATTTGATGTGAA+AGG | 0.516557 | 5.2:-82433777 | MS.gene91977:CDS |
| GTGTTGGTAAGAACCTTTGT+TGG | 0.519059 | 5.2:+82434407 | None:intergenic |
| GTCCAGGCTTGGTTGGTCCA+GGG | 0.519273 | 5.2:+82433205 | None:intergenic |
| GAGGTCATTGAGTCCAGGCT+TGG | 0.520820 | 5.2:+82433194 | None:intergenic |
| GAAGATGCCTGTGGTTGGAA+TGG | 0.533175 | 5.2:-82434372 | MS.gene91977:CDS |
| AGTGACAAGACCAAGTTCAA+TGG | 0.536834 | 5.2:+82434214 | None:intergenic |
| TCATTGAGTCCAGGCTTGGT+TGG | 0.552459 | 5.2:+82433198 | None:intergenic |
| AAGATGCCTGTGGTTGGAAT+GGG | 0.552845 | 5.2:-82434371 | MS.gene91977:CDS |
| TTGACATTTAGTCATCATAG+AGG | 0.571928 | 5.2:+82433175 | None:intergenic |
| TCATAGAGGTCATTGAGTCC+AGG | 0.572409 | 5.2:+82433189 | None:intergenic |
| GCTGATCCCATTCCAACCAC+AGG | 0.587516 | 5.2:+82434365 | None:intergenic |
| ATCATTGAAGCCATCAAACA+AGG | 0.587661 | 5.2:-82434305 | MS.gene91977:CDS |
| GAAAGGTGTTTGGGAATCCA+TGG | 0.587744 | 5.2:-82433760 | MS.gene91977:CDS |
| CTAAGATGGCTATATGAACA+AGG | 0.588672 | 5.2:-82433351 | MS.gene91977:CDS |
| AGGTGGAGATGAACCTTGCA+TGG | 0.591438 | 5.2:-82433536 | MS.gene91977:CDS |
| TGCAAGCAGAGGACCAAATG+AGG | 0.592065 | 5.2:-82433439 | MS.gene91977:CDS |
| TGAATTACTTGATTGACTGC+AGG | 0.596137 | 5.2:+82433642 | None:intergenic |
| CAACTGAAGATGCCTGTGGT+TGG | 0.607949 | 5.2:-82434377 | MS.gene91977:CDS |
| TTTCTTACATGTGAAGTCAG+GGG | 0.620409 | 5.2:+82434343 | None:intergenic |
| TGGCCACTTAGTTCTCAACC+TGG | 0.621982 | 5.2:-82433831 | MS.gene91977:CDS |
| AGAGCAGGAATAACAAGATG+AGG | 0.624425 | 5.2:+82434143 | None:intergenic |
| TTTCCAGGTTGAGAACTAAG+TGG | 0.629025 | 5.2:+82433828 | None:intergenic |
| CAGGAATAACAAGATGAGGA+TGG | 0.629084 | 5.2:+82434147 | None:intergenic |
| AAAGAGATTGCAGATGCACA+TGG | 0.633321 | 5.2:-82433396 | MS.gene91977:CDS |
| CTCAGAACAAGCTCTTGGAG+AGG | 0.635937 | 5.2:-82434249 | MS.gene91977:CDS |
| TTGAGGAAAGGTGCAAGCAG+AGG | 0.639249 | 5.2:-82433450 | MS.gene91977:CDS |
| CAGTGTTGAAATCCCAACAA+AGG | 0.660268 | 5.2:-82434420 | MS.gene91977:CDS |
| TAATCAACTGAAGATGCCTG+TGG | 0.710596 | 5.2:-82434381 | MS.gene91977:CDS |
| ATTGACTGCAGGAAGAACAG+TGG | 0.718468 | 5.2:+82433653 | None:intergenic |
| AGGTGTTTGGGAATCCATGG+AGG | 0.719619 | 5.2:-82433757 | MS.gene91977:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTTAGAAGTAACAAAA+AGG | + | chr5.2:82433427-82433446 | None:intergenic | 20.0% |
| !!! | TTTTGTTACTTCTAAACTTT+GGG | - | chr5.2:82433427-82433446 | MS.gene91977:CDS | 20.0% |
| !!! | TTTTTGTTACTTCTAAACTT+TGG | - | chr5.2:82433426-82433445 | MS.gene91977:CDS | 20.0% |
| ! | AAAATTTGCGTATCTTTGAT+TGG | - | chr5.2:82434323-82434342 | MS.gene91977:CDS | 25.0% |
| ! | CAAGAAGTTAATCAAAACTT+AGG | + | chr5.2:82434000-82434019 | None:intergenic | 25.0% |
| ! | CAATGAACTCATATATTTAC+AGG | - | chr5.2:82434051-82434070 | MS.gene91977:intron | 25.0% |
| ! | GAGTATATTTAGATGACATT+TGG | - | chr5.2:82433532-82433551 | MS.gene91977:CDS | 25.0% |
| !! | AATCAAAGATACGCAAATTT+TGG | + | chr5.2:82434324-82434343 | None:intergenic | 25.0% |
| ATTGGAAATGAAAACTTTCC+AGG | + | chr5.2:82433797-82433816 | None:intergenic | 30.0% | |
| TGAACTCATATATTTACAGG+TGG | - | chr5.2:82434054-82434073 | MS.gene91977:intron | 30.0% | |
| ! | GTTTTCATTTCCAATTGATG+TGG | - | chr5.2:82433802-82433821 | MS.gene91977:CDS | 30.0% |
| ! | TTGCACAAATATCTCTAAGA+TGG | - | chr5.2:82434242-82434261 | MS.gene91977:CDS | 30.0% |
| !! | ATTTGATGTGAAAGGTGTTT+GGG | - | chr5.2:82433838-82433857 | MS.gene91977:CDS | 30.0% |
| ATCATTGAAGCCATCAAACA+AGG | - | chr5.2:82433302-82433321 | MS.gene91977:CDS | 35.0% | |
| CAAACACCTTTCACATCAAA+TGG | + | chr5.2:82433839-82433858 | None:intergenic | 35.0% | |
| CTAAGATGGCTATATGAACA+AGG | - | chr5.2:82434256-82434275 | MS.gene91977:CDS | 35.0% | |
| CTCTTACCATTTGATGTGAA+AGG | - | chr5.2:82433830-82433849 | MS.gene91977:CDS | 35.0% | |
| CTTTCCTTATCATAGCTCTT+GGG | + | chr5.2:82434295-82434314 | None:intergenic | 35.0% | |
| CTTTCTTACATGTGAAGTCA+GGG | + | chr5.2:82433268-82433287 | None:intergenic | 35.0% | |
| TCATTCTCCATAACCTCATT+TGG | + | chr5.2:82434184-82434203 | None:intergenic | 35.0% | |
| TCTTTCCTTATCATAGCTCT+TGG | + | chr5.2:82434296-82434315 | None:intergenic | 35.0% | |
| TCTTTCTTACATGTGAAGTC+AGG | + | chr5.2:82433269-82433288 | None:intergenic | 35.0% | |
| TGAATTACTTGATTGACTGC+AGG | + | chr5.2:82433968-82433987 | None:intergenic | 35.0% | |
| TGGACTTGTACTTGATTCAT+TGG | - | chr5.2:82433756-82433775 | MS.gene91977:CDS | 35.0% | |
| TTGCATTGCAAAACTCTCTA+AGG | + | chr5.2:82434108-82434127 | None:intergenic | 35.0% | |
| TTTCTTACATGTGAAGTCAG+GGG | + | chr5.2:82433267-82433286 | None:intergenic | 35.0% | |
| ! | AGAGAGTTTTGCAATGCAAA+TGG | - | chr5.2:82434109-82434128 | MS.gene91977:intron | 35.0% |
| ! | GTGTCTATAACCTTGTTTGA+TGG | + | chr5.2:82433315-82433334 | None:intergenic | 35.0% |
| ! | TGTTGGTAAGAACCTTTGTT+GGG | + | chr5.2:82433202-82433221 | None:intergenic | 35.0% |
| !! | CATTTGATGTGAAAGGTGTT+TGG | - | chr5.2:82433837-82433856 | MS.gene91977:CDS | 35.0% |
| !! | TTGAGAGATTTTTGAAGAGC+AGG | + | chr5.2:82433482-82433501 | None:intergenic | 35.0% |
| AAAGAGATTGCAGATGCACA+TGG | - | chr5.2:82434211-82434230 | MS.gene91977:CDS | 40.0% | |
| AAGAGATCTGCCACATCAAT+TGG | + | chr5.2:82433815-82433834 | None:intergenic | 40.0% | |
| AAGCAAAATCGTTTGATCCC+TGG | - | chr5.2:82434385-82434404 | MS.gene91977:CDS | 40.0% | |
| AAGTTTCAAGCTTTCCTCCA+TGG | + | chr5.2:82433867-82433886 | None:intergenic | 40.0% | |
| AGAGCAGGAATAACAAGATG+AGG | + | chr5.2:82433467-82433486 | None:intergenic | 40.0% | |
| AGGCATCTTCAGTTGATTAG+AGG | + | chr5.2:82433225-82433244 | None:intergenic | 40.0% | |
| AGTGACAAGACCAAGTTCAA+TGG | + | chr5.2:82433396-82433415 | None:intergenic | 40.0% | |
| ATGGAGGAAAGCTTGAAACT+TGG | - | chr5.2:82433866-82433885 | MS.gene91977:CDS | 40.0% | |
| CAGGAATAACAAGATGAGGA+TGG | + | chr5.2:82433463-82433482 | None:intergenic | 40.0% | |
| CTTGGACTCACTAAAGCTAT+TGG | - | chr5.2:82433884-82433903 | MS.gene91977:intron | 40.0% | |
| GACTCTTCAACTAGACTACT+TGG | - | chr5.2:82433736-82433755 | MS.gene91977:CDS | 40.0% | |
| TAATCAACTGAAGATGCCTG+TGG | - | chr5.2:82433226-82433245 | MS.gene91977:CDS | 40.0% | |
| TGTTCCCAAGAGCTATGATA+AGG | - | chr5.2:82434288-82434307 | MS.gene91977:CDS | 40.0% | |
| TTGAAAGAGGCCATTGAACT+TGG | - | chr5.2:82433383-82433402 | MS.gene91977:CDS | 40.0% | |
| TTTGATACTGCTGCTGCATA+TGG | - | chr5.2:82433335-82433354 | MS.gene91977:CDS | 40.0% | |
| ! | CAGTGTTGAAATCCCAACAA+AGG | - | chr5.2:82433187-82433206 | MS.gene91977:CDS | 40.0% |
| ! | CTTCAGTTGATTAGAGGTGT+TGG | + | chr5.2:82433219-82433238 | None:intergenic | 40.0% |
| ! | GTGTTGGTAAGAACCTTTGT+TGG | + | chr5.2:82433203-82433222 | None:intergenic | 40.0% |
| ! | TTTCCAGGTTGAGAACTAAG+TGG | + | chr5.2:82433782-82433801 | None:intergenic | 40.0% |
| !! | GTGATTTGTTGATTTCGTGC+AGG | - | chr5.2:82433714-82433733 | MS.gene91977:CDS | 40.0% |
| AAGATGCCTGTGGTTGGAAT+GGG | - | chr5.2:82433236-82433255 | MS.gene91977:CDS | 45.0% | |
| ATTGACTGCAGGAAGAACAG+TGG | + | chr5.2:82433957-82433976 | None:intergenic | 45.0% | |
| CAGAGGACCAAATGAGGTTA+TGG | - | chr5.2:82434174-82434193 | MS.gene91977:CDS | 45.0% | |
| TATGGCTCAGAACAAGCTCT+TGG | - | chr5.2:82433353-82433372 | MS.gene91977:CDS | 45.0% | |
| TCATAGAGGTCATTGAGTCC+AGG | + | chr5.2:82434421-82434440 | None:intergenic | 45.0% | |
| ! | GGTTCTTTTGTTGCCATGCA+AGG | + | chr5.2:82434087-82434106 | None:intergenic | 45.0% |
| ! | TAACTGCGTTTTCGCCATTG+AGG | - | chr5.2:82434140-82434159 | MS.gene91977:CDS | 45.0% |
| !! | GAAAGGTGTTTGGGAATCCA+TGG | - | chr5.2:82433847-82433866 | MS.gene91977:CDS | 45.0% |
| !! | TCTTGGAGAGGCTTTGAAAG+AGG | - | chr5.2:82433370-82433389 | MS.gene91977:CDS | 45.0% |
| AGGTGGAGATGAACCTTGCA+TGG | - | chr5.2:82434071-82434090 | MS.gene91977:intron | 50.0% | |
| AGGTGTTTGGGAATCCATGG+AGG | - | chr5.2:82433850-82433869 | MS.gene91977:CDS | 50.0% | |
| CAACTGAAGATGCCTGTGGT+TGG | - | chr5.2:82433230-82433249 | MS.gene91977:CDS | 50.0% | |
| CTCAGAACAAGCTCTTGGAG+AGG | - | chr5.2:82433358-82433377 | MS.gene91977:CDS | 50.0% | |
| CTGCTTGCACCTTTCCTCAA+TGG | + | chr5.2:82434157-82434176 | None:intergenic | 50.0% | |
| GAAGATGCCTGTGGTTGGAA+TGG | - | chr5.2:82433235-82433254 | MS.gene91977:CDS | 50.0% | |
| TGCAAGCAGAGGACCAAATG+AGG | - | chr5.2:82434168-82434187 | MS.gene91977:CDS | 50.0% | |
| ! | GCGTTTTCGCCATTGAGGAA+AGG | - | chr5.2:82434145-82434164 | MS.gene91977:CDS | 50.0% |
| ! | TCATTGAGTCCAGGCTTGGT+TGG | + | chr5.2:82434412-82434431 | None:intergenic | 50.0% |
| ! | TGGCCACTTAGTTCTCAACC+TGG | - | chr5.2:82433776-82433795 | MS.gene91977:CDS | 50.0% |
| ! | TTGAGGAAAGGTGCAAGCAG+AGG | - | chr5.2:82434157-82434176 | MS.gene91977:CDS | 50.0% |
| GAGGTCATTGAGTCCAGGCT+TGG | + | chr5.2:82434416-82434435 | None:intergenic | 55.0% | |
| GCTGATCCCATTCCAACCAC+AGG | + | chr5.2:82433245-82433264 | None:intergenic | 55.0% | |
| ATCCCTGGACCAACCAAGCC+TGG | - | chr5.2:82434400-82434419 | MS.gene91977:CDS | 60.0% | |
| ! | AGTCCAGGCTTGGTTGGTCC+AGG | + | chr5.2:82434406-82434425 | None:intergenic | 60.0% |
| ! | GTCCAGGCTTGGTTGGTCCA+GGG | + | chr5.2:82434405-82434424 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 82433182 | 82434447 | 82433182 | ID=MS.gene91977 |
| chr5.2 | mRNA | 82433182 | 82434447 | 82433182 | ID=MS.gene91977.t1;Parent=MS.gene91977 |
| chr5.2 | exon | 82434128 | 82434447 | 82434128 | ID=MS.gene91977.t1.exon1;Parent=MS.gene91977.t1 |
| chr5.2 | CDS | 82434128 | 82434447 | 82434128 | ID=cds.MS.gene91977.t1;Parent=MS.gene91977.t1 |
| chr5.2 | exon | 82433650 | 82433893 | 82433650 | ID=MS.gene91977.t1.exon2;Parent=MS.gene91977.t1 |
| chr5.2 | CDS | 82433650 | 82433893 | 82433650 | ID=cds.MS.gene91977.t1;Parent=MS.gene91977.t1 |
| chr5.2 | exon | 82433182 | 82433556 | 82433182 | ID=MS.gene91977.t1.exon3;Parent=MS.gene91977.t1 |
| chr5.2 | CDS | 82433182 | 82433556 | 82433182 | ID=cds.MS.gene91977.t1;Parent=MS.gene91977.t1 |
| Gene Sequence |
| Protein sequence |
