Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07792.t1 | XP_013444360.1 | 96.5 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1175.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07792.t1 | Q43089 | 75.9 | 551 | 122 | 5 | 5 | 549 | 4 | 549 | 1.4e-256 | 886.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07792.t1 | A0A072TLX8 | 96.5 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1175.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene07792 | 0.828233 | 1.01E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene07792 | -0.811215 | 7.83E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene07792 | -0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene07792 | -0.823527 | 1.32E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene07792 | -0.826587 | 2.50E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene07792 | 0.841827 | 3.75E-58 | -1.69E-46 |
| MS.gene051044 | MS.gene07792 | 0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene07792 | 0.834733 | 2.53E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene07792 | 0.81237 | 4.39E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene07792 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene07792 | -0.819214 | 1.31E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene07792 | 0.82596 | 3.52E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene07792 | -0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene052494 | MS.gene07792 | 0.806101 | 9.69E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene07792 | 0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene07792 | -0.827347 | 1.65E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene07792 | 0.828153 | 1.05E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene07792 | 0.817712 | 2.86E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene07792 | -0.83462 | 2.70E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene07792 | 0.824294 | 8.72E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene07792 | -0.813412 | 2.59E-51 | -1.69E-46 |
| MS.gene056076 | MS.gene07792 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene07792 | 0.826181 | 3.12E-54 | -1.69E-46 |
| MS.gene056311 | MS.gene07792 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene056313 | MS.gene07792 | 0.836278 | 1.03E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene07792 | -0.804203 | 2.42E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene07792 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene056988 | MS.gene07792 | 0.801527 | 8.64E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene07792 | 0.814844 | 1.25E-51 | -1.69E-46 |
| MS.gene057291 | MS.gene07792 | 0.84936 | 3.40E-60 | -1.69E-46 |
| MS.gene057293 | MS.gene07792 | 0.837793 | 4.21E-57 | -1.69E-46 |
| MS.gene058099 | MS.gene07792 | 0.836769 | 7.71E-57 | -1.69E-46 |
| MS.gene058109 | MS.gene07792 | 0.810029 | 1.41E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene07792 | -0.807868 | 4.10E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene07792 | 0.840361 | 9.11E-58 | -1.69E-46 |
| MS.gene058173 | MS.gene07792 | 0.831356 | 1.75E-55 | -1.69E-46 |
| MS.gene058175 | MS.gene07792 | 0.838419 | 2.91E-57 | -1.69E-46 |
| MS.gene059045 | MS.gene07792 | 0.840476 | 8.50E-58 | -1.69E-46 |
| MS.gene059223 | MS.gene07792 | 0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene07792 | -0.801224 | 9.96E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene07792 | -0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene07792 | -0.816295 | 5.95E-52 | -1.69E-46 |
| MS.gene061038 | MS.gene07792 | 0.810733 | 9.95E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07792.t1 | MTR_8g017410 | 96.540 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1160 |
| MS.gene07792.t1 | MTR_8g017410 | 96.905 | 517 | 16 | 0 | 62 | 578 | 16 | 532 | 0.0 | 1035 |
| MS.gene07792.t1 | MTR_2g099950 | 77.565 | 575 | 121 | 4 | 4 | 575 | 3 | 572 | 0.0 | 917 |
| MS.gene07792.t1 | MTR_2g099950 | 79.256 | 511 | 102 | 2 | 67 | 575 | 1 | 509 | 0.0 | 849 |
| MS.gene07792.t1 | MTR_8g017410 | 96.569 | 408 | 14 | 0 | 1 | 408 | 1 | 408 | 0.0 | 825 |
| MS.gene07792.t1 | MTR_5g066380 | 63.511 | 581 | 192 | 10 | 6 | 575 | 3 | 574 | 0.0 | 751 |
| MS.gene07792.t1 | MTR_7g105050 | 54.419 | 577 | 250 | 8 | 1 | 574 | 7 | 573 | 0.0 | 635 |
| MS.gene07792.t1 | MTR_1g059700 | 53.195 | 579 | 256 | 9 | 1 | 575 | 1 | 568 | 0.0 | 626 |
| MS.gene07792.t1 | MTR_1g015910 | 55.805 | 534 | 229 | 4 | 44 | 574 | 42 | 571 | 0.0 | 612 |
| MS.gene07792.t1 | MTR_1g015970 | 54.307 | 534 | 237 | 4 | 44 | 574 | 16 | 545 | 0.0 | 595 |
| MS.gene07792.t1 | MTR_1g015910 | 55.039 | 516 | 225 | 4 | 62 | 574 | 17 | 528 | 0.0 | 575 |
| MS.gene07792.t1 | MTR_1g015980 | 50.000 | 546 | 258 | 9 | 42 | 577 | 14 | 554 | 0.0 | 535 |
| MS.gene07792.t1 | MTR_4g101630 | 48.302 | 530 | 260 | 8 | 48 | 572 | 112 | 632 | 1.66e-164 | 483 |
| MS.gene07792.t1 | MTR_3g008530 | 46.591 | 528 | 269 | 9 | 48 | 572 | 104 | 621 | 3.07e-162 | 477 |
| MS.gene07792.t1 | MTR_4g101630 | 47.490 | 518 | 258 | 8 | 60 | 572 | 12 | 520 | 4.23e-156 | 457 |
| MS.gene07792.t1 | MTR_1g015940 | 47.523 | 444 | 203 | 5 | 77 | 517 | 54 | 470 | 3.06e-138 | 410 |
| MS.gene07792.t1 | MTR_5g075120 | 93.750 | 32 | 2 | 0 | 535 | 566 | 24 | 55 | 3.41e-12 | 62.0 |
| MS.gene07792.t1 | MTR_1g015920 | 39.474 | 76 | 43 | 2 | 279 | 354 | 34 | 106 | 4.94e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07792.t1 | AT3G13790 | 65.785 | 567 | 181 | 8 | 19 | 575 | 21 | 584 | 0.0 | 752 |
| MS.gene07792.t1 | AT3G13790 | 65.256 | 567 | 181 | 9 | 19 | 575 | 21 | 581 | 0.0 | 740 |
| MS.gene07792.t1 | AT3G13790 | 66.602 | 515 | 161 | 6 | 69 | 575 | 3 | 514 | 0.0 | 691 |
| MS.gene07792.t1 | AT3G13790 | 66.602 | 515 | 161 | 6 | 69 | 575 | 3 | 514 | 0.0 | 691 |
| MS.gene07792.t1 | AT3G13790 | 66.602 | 515 | 161 | 6 | 69 | 575 | 3 | 514 | 0.0 | 691 |
| MS.gene07792.t1 | AT1G55120 | 58.390 | 584 | 220 | 7 | 5 | 578 | 7 | 577 | 0.0 | 689 |
| MS.gene07792.t1 | AT3G13784 | 56.597 | 576 | 224 | 10 | 10 | 572 | 9 | 571 | 0.0 | 660 |
| MS.gene07792.t1 | AT3G13784 | 56.250 | 576 | 226 | 10 | 10 | 572 | 9 | 571 | 0.0 | 654 |
| MS.gene07792.t1 | AT1G55120 | 60.338 | 532 | 199 | 6 | 57 | 578 | 8 | 537 | 0.0 | 651 |
| MS.gene07792.t1 | AT3G13784 | 56.076 | 576 | 224 | 11 | 10 | 572 | 9 | 568 | 0.0 | 649 |
| MS.gene07792.t1 | AT1G55120 | 60.305 | 524 | 196 | 6 | 65 | 578 | 17 | 538 | 0.0 | 644 |
| MS.gene07792.t1 | AT1G55120 | 60.190 | 525 | 197 | 6 | 64 | 578 | 40 | 562 | 0.0 | 644 |
| MS.gene07792.t1 | AT3G13784 | 58.621 | 522 | 202 | 8 | 60 | 572 | 2 | 518 | 0.0 | 625 |
| MS.gene07792.t1 | AT3G52600 | 53.528 | 581 | 246 | 11 | 8 | 571 | 8 | 581 | 0.0 | 607 |
| MS.gene07792.t1 | AT2G36190 | 52.205 | 567 | 250 | 9 | 24 | 575 | 27 | 587 | 0.0 | 587 |
| MS.gene07792.t1 | AT3G52600 | 54.198 | 524 | 222 | 8 | 62 | 571 | 8 | 527 | 0.0 | 565 |
| MS.gene07792.t1 | AT3G52600 | 53.950 | 519 | 221 | 8 | 67 | 571 | 1 | 515 | 0.0 | 555 |
| MS.gene07792.t1 | AT5G11920 | 49.540 | 543 | 245 | 10 | 48 | 575 | 17 | 545 | 0.0 | 523 |
| MS.gene07792.t1 | AT5G11920 | 48.855 | 524 | 239 | 10 | 67 | 575 | 1 | 510 | 4.41e-168 | 488 |
| MS.gene07792.t1 | AT1G62660 | 47.269 | 531 | 270 | 7 | 48 | 572 | 106 | 632 | 2.20e-163 | 481 |
| MS.gene07792.t1 | AT1G12240 | 43.978 | 548 | 296 | 7 | 32 | 572 | 105 | 648 | 4.31e-159 | 470 |
| MS.gene07792.t1 | AT1G62660 | 46.422 | 517 | 267 | 7 | 62 | 572 | 22 | 534 | 6.79e-154 | 453 |
| MS.gene07792.t1 | AT5G11920 | 51.399 | 393 | 171 | 9 | 48 | 434 | 17 | 395 | 1.78e-132 | 394 |
| MS.gene07792.t1 | AT1G62660 | 44.255 | 470 | 252 | 7 | 109 | 572 | 1 | 466 | 9.37e-128 | 384 |
| MS.gene07792.t1 | AT1G62660 | 44.255 | 470 | 252 | 7 | 109 | 572 | 1 | 466 | 9.37e-128 | 384 |
Find 118 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCTCCTTTGAGTATTT+TGG | 0.149574 | 8.1:-80135233 | None:intergenic |
| TCACTAGTTGGTTCCATTAA+TGG | 0.178086 | 8.1:-80134295 | None:intergenic |
| CTACTTTATGCTTTCAATAA+TGG | 0.186801 | 8.1:+80136491 | MS.gene07792:CDS |
| AAATTAATGCAAGTTCATTT+AGG | 0.188719 | 8.1:+80134323 | MS.gene07792:CDS |
| GACAAATTTGTCCCTGATAA+AGG | 0.213270 | 8.1:+80134658 | MS.gene07792:CDS |
| TGCTCCTCAAACCCTTTATC+AGG | 0.221497 | 8.1:-80134670 | None:intergenic |
| GATAATGATATGACCACTTA+TGG | 0.241644 | 8.1:+80136030 | MS.gene07792:CDS |
| AGACAATTCCAAGGACTATT+TGG | 0.251891 | 8.1:+80135128 | MS.gene07792:intron |
| TTACCATTTATCCAATTCTT+TGG | 0.254575 | 8.1:-80133035 | None:intergenic |
| CCTCCAAAGAATTGGATAAA+TGG | 0.258703 | 8.1:+80133032 | MS.gene07792:CDS |
| TATTAGAGAGGCTGAAGTTT+TGG | 0.273028 | 8.1:+80135664 | MS.gene07792:CDS |
| CACTCTGTGGTGGAGAGTTT+TGG | 0.278507 | 8.1:+80136404 | MS.gene07792:CDS |
| AATTAATGCAAGTTCATTTA+GGG | 0.289026 | 8.1:+80134324 | MS.gene07792:CDS |
| CAATCCTAAAGGTGCAGTTT+GGG | 0.290163 | 8.1:+80134021 | MS.gene07792:CDS |
| TTTCAACTGATCTTGTTAAC+TGG | 0.295469 | 8.1:+80134068 | MS.gene07792:CDS |
| AAAAGTGGATTGGGACCTTT+TGG | 0.301193 | 8.1:+80135737 | MS.gene07792:CDS |
| GGTGAATTGTTGCCAATTAA+TGG | 0.309135 | 8.1:+80135250 | MS.gene07792:CDS |
| GGAAATTGGAGGATAATTAT+TGG | 0.312645 | 8.1:+80134376 | MS.gene07792:CDS |
| TTTCCCCAAACTGCACCTTT+AGG | 0.314409 | 8.1:-80134025 | None:intergenic |
| ATGAAGAAAGCACAATTAAA+TGG | 0.325446 | 8.1:+80136554 | MS.gene07792:CDS |
| GCTGGTGTGACACCATTAAT+TGG | 0.331992 | 8.1:-80135262 | None:intergenic |
| ACAATCCTAAAGGTGCAGTT+TGG | 0.332961 | 8.1:+80134020 | MS.gene07792:CDS |
| GCATGTGTTGAAGGTTAGTT+TGG | 0.341518 | 8.1:+80134585 | MS.gene07792:CDS |
| GGTTAGGCAAAGATGGAAAT+TGG | 0.343073 | 8.1:+80134362 | MS.gene07792:CDS |
| TCTCAACCGTCCGATATAAA+TGG | 0.343321 | 8.1:+80134118 | MS.gene07792:CDS |
| ATTTCCAACCTCCAAAGAAT+TGG | 0.344409 | 8.1:+80133024 | MS.gene07792:CDS |
| AAACATGATTATTATCTCAT+TGG | 0.352794 | 8.1:+80134616 | MS.gene07792:CDS |
| ACAAATTTGTCCCTGATAAA+GGG | 0.372247 | 8.1:+80134659 | MS.gene07792:CDS |
| TCATTTAGGGATCCAACAAC+TGG | 0.379967 | 8.1:+80134337 | MS.gene07792:CDS |
| CAGTTTGGGGAAATATTGTA+TGG | 0.385408 | 8.1:+80134035 | MS.gene07792:CDS |
| GAAGCTGTCATTGAGAAGTT+TGG | 0.388748 | 8.1:+80136083 | MS.gene07792:CDS |
| TTGCCTAACCACCCAGTTGT+TGG | 0.388751 | 8.1:-80134349 | None:intergenic |
| TTTACTTTAATTTATATCAA+TGG | 0.391822 | 8.1:+80132906 | MS.gene07792:CDS |
| GATATAAATGGTTGTTGGTC+AGG | 0.395891 | 8.1:+80134130 | MS.gene07792:CDS |
| AACTTCTCAACTTCCACAAC+TGG | 0.405864 | 8.1:-80135184 | None:intergenic |
| AACATGATTATTATCTCATT+GGG | 0.406129 | 8.1:+80134617 | MS.gene07792:CDS |
| AAGTAGTGCCTTATCATTGA+TGG | 0.406784 | 8.1:-80136474 | None:intergenic |
| CATTAAATAGTGACGATGTT+AGG | 0.407895 | 8.1:+80134563 | MS.gene07792:CDS |
| TGTGGATTTGCAGATCCTAA+TGG | 0.410985 | 8.1:+80133201 | MS.gene07792:intron |
| CACCCTTTGCATTCAGCTAA+AGG | 0.411767 | 8.1:+80134472 | MS.gene07792:CDS |
| TTTGAACTTGGTGATTCATT+GGG | 0.421380 | 8.1:-80134207 | None:intergenic |
| CTGCACCTTTAGGATTGTAT+TGG | 0.421473 | 8.1:-80134015 | None:intergenic |
| AATGTACCAATTCTCAAAAC+AGG | 0.431232 | 8.1:-80134526 | None:intergenic |
| TCAAATTCTGTGTAGCCAAA+AGG | 0.431281 | 8.1:+80135703 | MS.gene07792:CDS |
| GGAAAGATGGCTGGATCTAG+TGG | 0.445642 | 8.1:-80134094 | None:intergenic |
| ATAATGATATGACCACTTAT+GGG | 0.445823 | 8.1:+80136031 | MS.gene07792:CDS |
| AGATCACAAGATTGAGTGCT+TGG | 0.446805 | 8.1:+80136528 | MS.gene07792:CDS |
| ACTATTTGGTTACACAAGTC+AGG | 0.447214 | 8.1:+80135142 | MS.gene07792:CDS |
| CACATCAATGAAAAGTGGAT+TGG | 0.448305 | 8.1:+80135727 | MS.gene07792:CDS |
| AAAATATAGCTTACTTGGGC+TGG | 0.449929 | 8.1:-80135280 | None:intergenic |
| GGGCAAAGACAAACCTGCTT+TGG | 0.450733 | 8.1:-80135859 | None:intergenic |
| ACATGGTGAGTAGCTTCAAT+AGG | 0.450751 | 8.1:-80132936 | None:intergenic |
| TTAATCCATTCCCTTAGAAA+AGG | 0.453499 | 8.1:-80134259 | None:intergenic |
| GATATCAAGAAAGGATGGTC+TGG | 0.457851 | 8.1:+80134817 | MS.gene07792:CDS |
| TGTCCCTGATAAAGGGTTTG+AGG | 0.458197 | 8.1:+80134666 | MS.gene07792:CDS |
| TGACCAACAACCATTTATAT+CGG | 0.463205 | 8.1:-80134128 | None:intergenic |
| GGATCAGCCACAATACTTCA+TGG | 0.464983 | 8.1:+80134151 | MS.gene07792:CDS |
| ATTCCAGTGTATAAAATAGC+TGG | 0.469730 | 8.1:-80134181 | None:intergenic |
| CCATTTATCCAATTCTTTGG+AGG | 0.469796 | 8.1:-80133032 | None:intergenic |
| TTATCCAATTCTTTGGAGGT+TGG | 0.470239 | 8.1:-80133028 | None:intergenic |
| ACATCAATGAAAAGTGGATT+GGG | 0.472461 | 8.1:+80135728 | MS.gene07792:CDS |
| CAAATTCTGTGTAGCCAAAA+GGG | 0.475246 | 8.1:+80135704 | MS.gene07792:CDS |
| CGATGTTAGGCATGTGTTGA+AGG | 0.475787 | 8.1:+80134576 | MS.gene07792:CDS |
| TAAGAGTAAATCCTGTCAAA+TGG | 0.478316 | 8.1:+80135206 | MS.gene07792:CDS |
| TTGCATTCAGCTAAAGGCAC+TGG | 0.481511 | 8.1:+80134478 | MS.gene07792:CDS |
| TTTGGCTACACAGAATTTGA+GGG | 0.485558 | 8.1:-80135700 | None:intergenic |
| CAGCTAAAGGCACTGGAATG+TGG | 0.487107 | 8.1:+80134485 | MS.gene07792:CDS |
| TACATTGGCCATCAATGATA+AGG | 0.488874 | 8.1:+80136466 | MS.gene07792:CDS |
| AAATGATAAGCAGTTCTGTA+AGG | 0.500173 | 8.1:-80133005 | None:intergenic |
| ACTGGGTGGTTAGGCAAAGA+TGG | 0.501772 | 8.1:+80134355 | MS.gene07792:CDS |
| AGTTCTGTAAGGTTGTTTGA+AGG | 0.502878 | 8.1:-80132994 | None:intergenic |
| TAAAGTCCTTTGTAACTCAA+TGG | 0.506003 | 8.1:-80133980 | None:intergenic |
| TTGATGATGGGAAGAAGAGA+AGG | 0.514874 | 8.1:+80134752 | MS.gene07792:CDS |
| GATCCAACAACTGGGTGGTT+AGG | 0.518475 | 8.1:+80134346 | MS.gene07792:CDS |
| TGCCTTTAGCTGAATGCAAA+GGG | 0.522860 | 8.1:-80134474 | None:intergenic |
| TTCTACCAATACAATCCTAA+AGG | 0.523930 | 8.1:+80134010 | MS.gene07792:CDS |
| TTGTGTAACCAAATAGTCCT+TGG | 0.524635 | 8.1:-80135136 | None:intergenic |
| GGTTGAGATGGAAAGATGGC+TGG | 0.526843 | 8.1:-80134103 | None:intergenic |
| CGTCCGATATAAATGGTTGT+TGG | 0.529048 | 8.1:+80134125 | MS.gene07792:CDS |
| ATCCAGAGTTTATCCTACAT+TGG | 0.530791 | 8.1:+80136451 | MS.gene07792:CDS |
| GTCTATAAAAGTCCCATAAG+TGG | 0.532511 | 8.1:-80136043 | None:intergenic |
| GTTGATACAGTGGCCAGTTG+TGG | 0.539361 | 8.1:+80135171 | MS.gene07792:CDS |
| AGCTAAAGGCACTGGAATGT+GGG | 0.543615 | 8.1:+80134486 | MS.gene07792:CDS |
| TTTATATCGGACGGTTGAGA+TGG | 0.547063 | 8.1:-80134115 | None:intergenic |
| CAATCTTGTGATCTTGACAT+TGG | 0.547958 | 8.1:-80136519 | None:intergenic |
| AAGGGCACATCAATGAAAAG+TGG | 0.553430 | 8.1:+80135722 | MS.gene07792:CDS |
| TGGTAGCAAAAGAAACACTA+GGG | 0.560168 | 8.1:+80134396 | MS.gene07792:CDS |
| GCTCCTCAAACCCTTTATCA+GGG | 0.563372 | 8.1:-80134669 | None:intergenic |
| GTGCCTTTAGCTGAATGCAA+AGG | 0.565473 | 8.1:-80134475 | None:intergenic |
| CAACAACCATTTATATCGGA+CGG | 0.569338 | 8.1:-80134124 | None:intergenic |
| TTGGTAGCAAAAGAAACACT+AGG | 0.573322 | 8.1:+80134395 | MS.gene07792:CDS |
| GGACGGTTGAGATGGAAAGA+TGG | 0.576030 | 8.1:-80134107 | None:intergenic |
| GAAAGATGGCTGGATCTAGT+GGG | 0.576401 | 8.1:-80134093 | None:intergenic |
| TTCACAGATTGATCACTCTG+TGG | 0.577587 | 8.1:+80136391 | MS.gene07792:intron |
| TTATCATTGATGGCCAATGT+AGG | 0.579853 | 8.1:-80136464 | None:intergenic |
| GTTGCTGATGATATCAAGAA+AGG | 0.586411 | 8.1:+80134808 | MS.gene07792:CDS |
| CTGATGATATCAAGAAAGGA+TGG | 0.598135 | 8.1:+80134812 | MS.gene07792:CDS |
| TTTGTTACCATGAAGTATTG+TGG | 0.599608 | 8.1:-80134158 | None:intergenic |
| CATCAGAAGATAAACTCTGA+AGG | 0.599752 | 8.1:-80132968 | None:intergenic |
| TGAAGTGAATAATATTAGAG+AGG | 0.608534 | 8.1:+80135652 | MS.gene07792:CDS |
| ACAGATTGATCACTCTGTGG+TGG | 0.609065 | 8.1:+80136394 | MS.gene07792:intron |
| ATAGGACCATTGAGTTACAA+AGG | 0.609277 | 8.1:+80133974 | MS.gene07792:intron |
| GGCCAATGTAGGATAAACTC+TGG | 0.612364 | 8.1:-80136453 | None:intergenic |
| ATATAAATTAAAGTAAAGAG+AGG | 0.612938 | 8.1:-80132900 | None:intergenic |
| TAGGCAAAGATGGAAATTGG+AGG | 0.613925 | 8.1:+80134365 | MS.gene07792:CDS |
| TGACTATATTCTCTACTATG+TGG | 0.616850 | 8.1:+80132871 | MS.gene07792:CDS |
| TGTATATGCAGACAATTCCA+AGG | 0.624497 | 8.1:+80135119 | MS.gene07792:intron |
| TGGCCCACCAAAATACTCAA+AGG | 0.632566 | 8.1:+80135226 | MS.gene07792:CDS |
| TCTGAAGGTTTCTATAAACA+TGG | 0.633706 | 8.1:-80132953 | None:intergenic |
| GATATCATCAGCAACACTTG+AGG | 0.639793 | 8.1:-80134800 | None:intergenic |
| AATCCTAAAGGTGCAGTTTG+GGG | 0.643615 | 8.1:+80134022 | MS.gene07792:CDS |
| CATTTAGGGATCCAACAACT+GGG | 0.646395 | 8.1:+80134338 | MS.gene07792:CDS |
| AGTTTGGGGAAATATTGTAT+GGG | 0.646588 | 8.1:+80134036 | MS.gene07792:CDS |
| CAGGAAAACAGTTGATACAG+TGG | 0.677166 | 8.1:+80135161 | MS.gene07792:CDS |
| CCCACCAAAATACTCAAAGG+AGG | 0.687045 | 8.1:+80135229 | MS.gene07792:CDS |
| AAAGATGGCTGGATCTAGTG+GGG | 0.700863 | 8.1:-80134092 | None:intergenic |
| TTAGGGATCCAACAACTGGG+TGG | 0.706173 | 8.1:+80134341 | MS.gene07792:CDS |
| GGTAGCAAAAGAAACACTAG+GGG | 0.722203 | 8.1:+80134397 | MS.gene07792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTCAAAAAAAGAAAT+AGG | - | chr8.1:80133094-80133113 | None:intergenic | 10.0% |
| !! | ATATTTCAAAAAAAGAAATA+GGG | - | chr8.1:80133093-80133112 | None:intergenic | 10.0% |
| !! | TTCAAAAGTAATATAATAAA+CGG | + | chr8.1:80133513-80133532 | MS.gene07792:intron | 10.0% |
| !!! | TTTACTTTAATTTATATCAA+TGG | + | chr8.1:80132906-80132925 | MS.gene07792:CDS | 10.0% |
| !! | AAAAAAAAATATAGCTTACT+TGG | - | chr8.1:80135288-80135307 | None:intergenic | 15.0% |
| !! | AAAAAAAATATAGCTTACTT+GGG | - | chr8.1:80135287-80135306 | None:intergenic | 15.0% |
| !! | AACTAATAACAAAAATATCA+AGG | - | chr8.1:80134871-80134890 | None:intergenic | 15.0% |
| !! | ATATAAATTAAAGTAAAGAG+AGG | - | chr8.1:80132903-80132922 | None:intergenic | 15.0% |
| !! | ATGAATATAATGATAGTTTA+AGG | + | chr8.1:80133813-80133832 | MS.gene07792:intron | 15.0% |
| !! | ATTAAAAGAGTAAATTTACA+AGG | + | chr8.1:80135525-80135544 | MS.gene07792:intron | 15.0% |
| !! | GAAAAATTAATATAGTATAG+AGG | + | chr8.1:80133559-80133578 | MS.gene07792:intron | 15.0% |
| !!! | AGAGTAAAGATTTTATTAAT+TGG | + | chr8.1:80134437-80134456 | MS.gene07792:CDS | 15.0% |
| !!! | ATTAATCAATTATTTTATGC+AGG | + | chr8.1:80135610-80135629 | MS.gene07792:intron | 15.0% |
| !!! | CTTTTAATTTGAATCATTAT+TGG | - | chr8.1:80135513-80135532 | None:intergenic | 15.0% |
| !!! | GACTTTTTTGTTTATATTTA+AGG | + | chr8.1:80136275-80136294 | MS.gene07792:intron | 15.0% |
| !!! | TCATTATATTCATATTTTAC+TGG | - | chr8.1:80133806-80133825 | None:intergenic | 15.0% |
| !!! | TGATTGTTTTTCTTATATAT+TGG | - | chr8.1:80133604-80133623 | None:intergenic | 15.0% |
| !!! | TTAATTTTATTTTCACTAGT+TGG | - | chr8.1:80134310-80134329 | None:intergenic | 15.0% |
| !! | AAAATGCATCTTTAATTAAC+AGG | + | chr8.1:80135992-80136011 | MS.gene07792:intron | 20.0% |
| !! | AAACATGATTATTATCTCAT+TGG | + | chr8.1:80134616-80134635 | MS.gene07792:CDS | 20.0% |
| !! | AAATTAATGCAAGTTCATTT+AGG | + | chr8.1:80134323-80134342 | MS.gene07792:CDS | 20.0% |
| !! | AACATGATTATTATCTCATT+GGG | + | chr8.1:80134617-80134636 | MS.gene07792:CDS | 20.0% |
| !! | AATTAATGCAAGTTCATTTA+GGG | + | chr8.1:80134324-80134343 | MS.gene07792:CDS | 20.0% |
| !! | CAAAAAAATTAAAAAGGAAG+TGG | + | chr8.1:80133779-80133798 | MS.gene07792:intron | 20.0% |
| !! | CAAATACCAACAAAAAAATT+TGG | + | chr8.1:80135820-80135839 | MS.gene07792:CDS | 20.0% |
| !! | CTATTTAACTAATTAGTTGT+AGG | + | chr8.1:80133628-80133647 | MS.gene07792:intron | 20.0% |
| !! | TAATTTATTAGAACTCCAAA+TGG | - | chr8.1:80136359-80136378 | None:intergenic | 20.0% |
| !! | TACAATCCATAAAAAAAAGT+TGG | - | chr8.1:80136160-80136179 | None:intergenic | 20.0% |
| !! | TGTGACTAATAAGATATATT+TGG | + | chr8.1:80135429-80135448 | MS.gene07792:intron | 20.0% |
| !!! | AAAAGGATCAGATAAATTTT+TGG | - | chr8.1:80134245-80134264 | None:intergenic | 20.0% |
| !!! | AAAGGATCAGATAAATTTTT+GGG | - | chr8.1:80134244-80134263 | None:intergenic | 20.0% |
| !!! | CAAATTTTGAGATATGATTA+TGG | + | chr8.1:80134703-80134722 | MS.gene07792:CDS | 20.0% |
| !!! | CATTCATTATATTTTCCATT+TGG | + | chr8.1:80136341-80136360 | MS.gene07792:intron | 20.0% |
| !!! | TTAATTTGAATCATTATTGG+AGG | - | chr8.1:80135510-80135529 | None:intergenic | 20.0% |
| !!! | TTATATATGTGACTTTTGAT+AGG | + | chr8.1:80133956-80133975 | MS.gene07792:intron | 20.0% |
| !!! | TTTTCTATGTGATTGTTTTT+TGG | + | chr8.1:80133912-80133931 | MS.gene07792:intron | 20.0% |
| !!! | TTTTCTTGTTATGATTTCTT+TGG | - | chr8.1:80133544-80133563 | None:intergenic | 20.0% |
| ! | AAAAACTGTCATTCAAAGAA+TGG | + | chr8.1:80133730-80133749 | MS.gene07792:intron | 25.0% |
| ! | AAATCACTTACTTGATCAAT+TGG | + | chr8.1:80133664-80133683 | MS.gene07792:intron | 25.0% |
| ! | AACTAATTAGTTGTAGGTAT+AGG | + | chr8.1:80133634-80133653 | MS.gene07792:intron | 25.0% |
| ! | AATCTTATGCAAATAACTAG+AGG | - | chr8.1:80135883-80135902 | None:intergenic | 25.0% |
| ! | ATAATGATATGACCACTTAT+GGG | + | chr8.1:80136031-80136050 | MS.gene07792:CDS | 25.0% |
| ! | ATAGTCATAATAGATGATGA+TGG | - | chr8.1:80133315-80133334 | None:intergenic | 25.0% |
| ! | ATCTTATGCAAATAACTAGA+GGG | - | chr8.1:80135882-80135901 | None:intergenic | 25.0% |
| ! | ATTTATGAAGTCATGAAATG+AGG | + | chr8.1:80136201-80136220 | MS.gene07792:intron | 25.0% |
| ! | CTACTTTATGCTTTCAATAA+TGG | + | chr8.1:80136491-80136510 | MS.gene07792:CDS | 25.0% |
| ! | GAATTTAGTCAAAACTCAAA+AGG | + | chr8.1:80133482-80133501 | MS.gene07792:intron | 25.0% |
| ! | GGAAATATATCATCAATAAG+AGG | + | chr8.1:80136303-80136322 | MS.gene07792:intron | 25.0% |
| ! | TAATAGTTAGATATGACCTA+TGG | - | chr8.1:80133415-80133434 | None:intergenic | 25.0% |
| ! | TAGTTTATGCTAAATAGTCA+GGG | + | chr8.1:80135062-80135081 | MS.gene07792:intron | 25.0% |
| ! | TCAAAAACTTTCTTTGATGA+TGG | + | chr8.1:80134739-80134758 | MS.gene07792:CDS | 25.0% |
| ! | TCAAATATAATCATGTGTGT+CGG | - | chr8.1:80133352-80133371 | None:intergenic | 25.0% |
| ! | TCTAATTCATTGAGCATTTA+AGG | + | chr8.1:80136111-80136130 | MS.gene07792:intron | 25.0% |
| ! | TGAAGTGAATAATATTAGAG+AGG | + | chr8.1:80135652-80135671 | MS.gene07792:CDS | 25.0% |
| ! | TTACCATTTATCCAATTCTT+TGG | - | chr8.1:80133038-80133057 | None:intergenic | 25.0% |
| ! | TTAGTTTATGCTAAATAGTC+AGG | + | chr8.1:80135061-80135080 | MS.gene07792:intron | 25.0% |
| !! | AAGGATCAGATAAATTTTTG+GGG | - | chr8.1:80134243-80134262 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGCACAATTAAA+TGG | + | chr8.1:80136554-80136573 | MS.gene07792:CDS | 25.0% |
| !! | ATTTATCTGATCCTTTTCTA+AGG | + | chr8.1:80134248-80134267 | MS.gene07792:CDS | 25.0% |
| !! | CAAAAACTTTCTTTGATGAT+GGG | + | chr8.1:80134740-80134759 | MS.gene07792:CDS | 25.0% |
| !! | GCATTTTTATAAGATAGAGT+TGG | - | chr8.1:80135979-80135998 | None:intergenic | 25.0% |
| !! | TTCATAAATTGCAACTTTTG+TGG | - | chr8.1:80136190-80136209 | None:intergenic | 25.0% |
| !! | TTGTTTATATTTAAGGCTAG+AGG | + | chr8.1:80136282-80136301 | MS.gene07792:intron | 25.0% |
| !! | TTTATCTGATCCTTTTCTAA+GGG | + | chr8.1:80134249-80134268 | MS.gene07792:CDS | 25.0% |
| !!! | CTACCTTAGTTTATTTTCTA+GGG | + | chr8.1:80134946-80134965 | MS.gene07792:intron | 25.0% |
| !!! | CTTTTCATGTCATTGTTTTT+TGG | + | chr8.1:80133859-80133878 | MS.gene07792:intron | 25.0% |
| !!! | TCTACCTTAGTTTATTTTCT+AGG | + | chr8.1:80134945-80134964 | MS.gene07792:intron | 25.0% |
| !!! | TTTTTTCCTGTTTTGAGAAT+TGG | + | chr8.1:80134520-80134539 | MS.gene07792:CDS | 25.0% |
| !!! | TTTTTTTATGGATTGTAGTG+TGG | + | chr8.1:80136163-80136182 | MS.gene07792:intron | 25.0% |
| AAACTACTTCAAGTCAACTT+TGG | - | chr8.1:80135043-80135062 | None:intergenic | 30.0% | |
| AAATGATAAGCAGTTCTGTA+AGG | - | chr8.1:80133008-80133027 | None:intergenic | 30.0% | |
| AATGTACCAATTCTCAAAAC+AGG | - | chr8.1:80134529-80134548 | None:intergenic | 30.0% | |
| ACAAATTTGTCCCTGATAAA+GGG | + | chr8.1:80134659-80134678 | MS.gene07792:CDS | 30.0% | |
| AGAGAAATGAACTAACCATT+AGG | - | chr8.1:80133219-80133238 | None:intergenic | 30.0% | |
| AGTTTGGGGAAATATTGTAT+GGG | + | chr8.1:80134036-80134055 | MS.gene07792:CDS | 30.0% | |
| ATGCCCTAGAAAATAAACTA+AGG | - | chr8.1:80134952-80134971 | None:intergenic | 30.0% | |
| ATTCCAGTGTATAAAATAGC+TGG | - | chr8.1:80134184-80134203 | None:intergenic | 30.0% | |
| CATTAAATAGTGACGATGTT+AGG | + | chr8.1:80134563-80134582 | MS.gene07792:CDS | 30.0% | |
| CTCAAAACAGGAAAAAAATC+AGG | - | chr8.1:80134517-80134536 | None:intergenic | 30.0% | |
| GATAATGATATGACCACTTA+TGG | + | chr8.1:80136030-80136049 | MS.gene07792:CDS | 30.0% | |
| GGAAATTGGAGGATAATTAT+TGG | + | chr8.1:80134376-80134395 | MS.gene07792:CDS | 30.0% | |
| GTCATCCAAAAATCCATTAA+TGG | + | chr8.1:80134282-80134301 | MS.gene07792:CDS | 30.0% | |
| TAAAGTCCTTTGTAACTCAA+TGG | - | chr8.1:80133983-80134002 | None:intergenic | 30.0% | |
| TAAGAGTAAATCCTGTCAAA+TGG | + | chr8.1:80135206-80135225 | MS.gene07792:CDS | 30.0% | |
| TCTGAAGGTTTCTATAAACA+TGG | - | chr8.1:80132956-80132975 | None:intergenic | 30.0% | |
| TGACCAACAACCATTTATAT+CGG | - | chr8.1:80134131-80134150 | None:intergenic | 30.0% | |
| TGACTATATTCTCTACTATG+TGG | + | chr8.1:80132871-80132890 | MS.gene07792:CDS | 30.0% | |
| TTAATCCATTCCCTTAGAAA+AGG | - | chr8.1:80134262-80134281 | None:intergenic | 30.0% | |
| TTCTACCAATACAATCCTAA+AGG | + | chr8.1:80134010-80134029 | MS.gene07792:CDS | 30.0% | |
| TTTCAACTGATCTTGTTAAC+TGG | + | chr8.1:80134068-80134087 | MS.gene07792:CDS | 30.0% | |
| TTTGACATGTTATGCTCAAA+TGG | + | chr8.1:80133160-80133179 | MS.gene07792:intron | 30.0% | |
| ! | ACATCAATGAAAAGTGGATT+GGG | + | chr8.1:80135728-80135747 | MS.gene07792:CDS | 30.0% |
| ! | TTTGAACTTGGTGATTCATT+GGG | - | chr8.1:80134210-80134229 | None:intergenic | 30.0% |
| !! | AAACCAGCTATTTTATACAC+TGG | + | chr8.1:80134178-80134197 | MS.gene07792:CDS | 30.0% |
| !! | GGTATGCTATATTTTGAACT+TGG | - | chr8.1:80134222-80134241 | None:intergenic | 30.0% |
| !! | TTTGTTACCATGAAGTATTG+TGG | - | chr8.1:80134161-80134180 | None:intergenic | 30.0% |
| !! | TTTTGAACTTGGTGATTCAT+TGG | - | chr8.1:80134211-80134230 | None:intergenic | 30.0% |
| !!! | AGAGCACCAAATTTTTTTGT+TGG | - | chr8.1:80135829-80135848 | None:intergenic | 30.0% |
| !!! | GTTTTGAGAATTGGTACATT+TGG | + | chr8.1:80134529-80134548 | MS.gene07792:CDS | 30.0% |
| !!! | TGGTTCCATTAATGGATTTT+TGG | - | chr8.1:80134290-80134309 | None:intergenic | 30.0% |
| !!! | TTAGTTTATTTTCTAGGGCA+TGG | + | chr8.1:80134951-80134970 | MS.gene07792:intron | 30.0% |
| AAAATATAGCTTACTTGGGC+TGG | - | chr8.1:80135283-80135302 | None:intergenic | 35.0% | |
| AAGTAGTGCCTTATCATTGA+TGG | - | chr8.1:80136477-80136496 | None:intergenic | 35.0% | |
| ACATTTGTGTTATGCTCCAT+AGG | + | chr8.1:80133396-80133415 | MS.gene07792:intron | 35.0% | |
| ACTATTTGGTTACACAAGTC+AGG | + | chr8.1:80135142-80135161 | MS.gene07792:CDS | 35.0% | |
| AGACAATTCCAAGGACTATT+TGG | + | chr8.1:80135128-80135147 | MS.gene07792:intron | 35.0% | |
| AGTTCTGTAAGGTTGTTTGA+AGG | - | chr8.1:80132997-80133016 | None:intergenic | 35.0% | |
| ATAGGACCATTGAGTTACAA+AGG | + | chr8.1:80133974-80133993 | MS.gene07792:intron | 35.0% | |
| ATATGTGGATGCGTATTATG+TGG | + | chr8.1:80133183-80133202 | MS.gene07792:intron | 35.0% | |
| ATCCAGAGTTTATCCTACAT+TGG | + | chr8.1:80136451-80136470 | MS.gene07792:CDS | 35.0% | |
| ATTTCCAACCTCCAAAGAAT+TGG | + | chr8.1:80133024-80133043 | MS.gene07792:CDS | 35.0% | |
| CAAATTCTGTGTAGCCAAAA+GGG | + | chr8.1:80135704-80135723 | MS.gene07792:CDS | 35.0% | |
| CAACAACCATTTATATCGGA+CGG | - | chr8.1:80134127-80134146 | None:intergenic | 35.0% | |
| CAATCTTGTGATCTTGACAT+TGG | - | chr8.1:80136522-80136541 | None:intergenic | 35.0% | |
| CACATCAATGAAAAGTGGAT+TGG | + | chr8.1:80135727-80135746 | MS.gene07792:CDS | 35.0% | |
| CAGTTTGGGGAAATATTGTA+TGG | + | chr8.1:80134035-80134054 | MS.gene07792:CDS | 35.0% | |
| CATCAGAAGATAAACTCTGA+AGG | - | chr8.1:80132971-80132990 | None:intergenic | 35.0% | |
| CATTGTAAGACTTAGAGATG+TGG | - | chr8.1:80135388-80135407 | None:intergenic | 35.0% | |
| CCATTTATCCAATTCTTTGG+AGG | - | chr8.1:80133035-80133054 | None:intergenic | 35.0% | |
| CCTCCAAAGAATTGGATAAA+TGG | + | chr8.1:80133032-80133051 | MS.gene07792:CDS | 35.0% | |
| CTATGCATAATGCATGTGTT+AGG | - | chr8.1:80136256-80136275 | None:intergenic | 35.0% | |
| CTGATGATATCAAGAAAGGA+TGG | + | chr8.1:80134812-80134831 | MS.gene07792:CDS | 35.0% | |
| GACAAATTTGTCCCTGATAA+AGG | + | chr8.1:80134658-80134677 | MS.gene07792:CDS | 35.0% | |
| GAGTGATCAATCTGTGAAAA+AGG | - | chr8.1:80136389-80136408 | None:intergenic | 35.0% | |
| GATATAAATGGTTGTTGGTC+AGG | + | chr8.1:80134130-80134149 | MS.gene07792:CDS | 35.0% | |
| GGTGAATTGTTGCCAATTAA+TGG | + | chr8.1:80135250-80135269 | MS.gene07792:CDS | 35.0% | |
| GTCTATAAAAGTCCCATAAG+TGG | - | chr8.1:80136046-80136065 | None:intergenic | 35.0% | |
| GTTATGCTCAAATGGATATG+TGG | + | chr8.1:80133168-80133187 | MS.gene07792:intron | 35.0% | |
| GTTGCTGATGATATCAAGAA+AGG | + | chr8.1:80134808-80134827 | MS.gene07792:CDS | 35.0% | |
| TACATTGGCCATCAATGATA+AGG | + | chr8.1:80136466-80136485 | MS.gene07792:CDS | 35.0% | |
| TCAAAACTCAAAAGGCTGAA+AGG | + | chr8.1:80133490-80133509 | MS.gene07792:intron | 35.0% | |
| TCAAATTCTGTGTAGCCAAA+AGG | + | chr8.1:80135703-80135722 | MS.gene07792:CDS | 35.0% | |
| TGGTAGCAAAAGAAACACTA+GGG | + | chr8.1:80134396-80134415 | MS.gene07792:CDS | 35.0% | |
| TGTATATGCAGACAATTCCA+AGG | + | chr8.1:80135119-80135138 | MS.gene07792:intron | 35.0% | |
| TTGTGTAACCAAATAGTCCT+TGG | - | chr8.1:80135139-80135158 | None:intergenic | 35.0% | |
| TTTGGCTACACAGAATTTGA+GGG | - | chr8.1:80135703-80135722 | None:intergenic | 35.0% | |
| ! | AAGAAGAGAAGGATTTTGCT+TGG | + | chr8.1:80134763-80134782 | MS.gene07792:CDS | 35.0% |
| ! | TATTAGAGAGGCTGAAGTTT+TGG | + | chr8.1:80135664-80135683 | MS.gene07792:CDS | 35.0% |
| ! | TCACTAGTTGGTTCCATTAA+TGG | - | chr8.1:80134298-80134317 | None:intergenic | 35.0% |
| ! | TTATCATTGATGGCCAATGT+AGG | - | chr8.1:80136467-80136486 | None:intergenic | 35.0% |
| ! | TTATCCAATTCTTTGGAGGT+TGG | - | chr8.1:80133031-80133050 | None:intergenic | 35.0% |
| ! | TTATGGGACTTTTATAGACG+TGG | + | chr8.1:80136047-80136066 | MS.gene07792:CDS | 35.0% |
| ! | TTCACCTCCTTTGAGTATTT+TGG | - | chr8.1:80135236-80135255 | None:intergenic | 35.0% |
| ! | TTGGTAGCAAAAGAAACACT+AGG | + | chr8.1:80134395-80134414 | MS.gene07792:CDS | 35.0% |
| ! | TTTTCATTGATGTGCCCTTT+TGG | - | chr8.1:80135721-80135740 | None:intergenic | 35.0% |
| !! | AGATGATGATGGTGATACAA+TGG | - | chr8.1:80133304-80133323 | None:intergenic | 35.0% |
| !! | TTTTGGCTACACAGAATTTG+AGG | - | chr8.1:80135704-80135723 | None:intergenic | 35.0% |
| !!! | CTGCTAGTTTTTGCTTCAAA+GGG | + | chr8.1:80135761-80135780 | MS.gene07792:CDS | 35.0% |
| !!! | GATGCGCCAACTTTTTTTTA+TGG | + | chr8.1:80136151-80136170 | MS.gene07792:intron | 35.0% |
| !!! | TGCTAGTTTTTGCTTCAAAG+GGG | + | chr8.1:80135762-80135781 | MS.gene07792:CDS | 35.0% |
| AACTTCTCAACTTCCACAAC+TGG | - | chr8.1:80135187-80135206 | None:intergenic | 40.0% | |
| ACATGGTGAGTAGCTTCAAT+AGG | - | chr8.1:80132939-80132958 | None:intergenic | 40.0% | |
| AGATCACAAGATTGAGTGCT+TGG | + | chr8.1:80136528-80136547 | MS.gene07792:CDS | 40.0% | |
| CATTTAGGGATCCAACAACT+GGG | + | chr8.1:80134338-80134357 | MS.gene07792:CDS | 40.0% | |
| CGTCCGATATAAATGGTTGT+TGG | + | chr8.1:80134125-80134144 | MS.gene07792:CDS | 40.0% | |
| GAAGCTGTCATTGAGAAGTT+TGG | + | chr8.1:80136083-80136102 | MS.gene07792:CDS | 40.0% | |
| GATATCAAGAAAGGATGGTC+TGG | + | chr8.1:80134817-80134836 | MS.gene07792:CDS | 40.0% | |
| GATATCATCAGCAACACTTG+AGG | - | chr8.1:80134803-80134822 | None:intergenic | 40.0% | |
| GGTAGCAAAAGAAACACTAG+GGG | + | chr8.1:80134397-80134416 | MS.gene07792:CDS | 40.0% | |
| GGTTAGGCAAAGATGGAAAT+TGG | + | chr8.1:80134362-80134381 | MS.gene07792:CDS | 40.0% | |
| TAGGCAAAGATGGAAATTGG+AGG | + | chr8.1:80134365-80134384 | MS.gene07792:CDS | 40.0% | |
| TCATTTAGGGATCCAACAAC+TGG | + | chr8.1:80134337-80134356 | MS.gene07792:CDS | 40.0% | |
| TCTCAACCGTCCGATATAAA+TGG | + | chr8.1:80134118-80134137 | MS.gene07792:CDS | 40.0% | |
| TGCCTTTAGCTGAATGCAAA+GGG | - | chr8.1:80134477-80134496 | None:intergenic | 40.0% | |
| TGTGGATTTGCAGATCCTAA+TGG | + | chr8.1:80133201-80133220 | MS.gene07792:intron | 40.0% | |
| TTCACAGATTGATCACTCTG+TGG | + | chr8.1:80136391-80136410 | MS.gene07792:intron | 40.0% | |
| TTCTCATGCTTGATCTTAGC+TGG | - | chr8.1:80135017-80135036 | None:intergenic | 40.0% | |
| TTTATATCGGACGGTTGAGA+TGG | - | chr8.1:80134118-80134137 | None:intergenic | 40.0% | |
| ! | AAGGGCACATCAATGAAAAG+TGG | + | chr8.1:80135722-80135741 | MS.gene07792:CDS | 40.0% |
| ! | AATCCTAAAGGTGCAGTTTG+GGG | + | chr8.1:80134022-80134041 | MS.gene07792:CDS | 40.0% |
| ! | ACAATCCTAAAGGTGCAGTT+TGG | + | chr8.1:80134020-80134039 | MS.gene07792:CDS | 40.0% |
| ! | AGAGAAGGATTTTGCTTGGA+TGG | + | chr8.1:80134767-80134786 | MS.gene07792:CDS | 40.0% |
| ! | CAATCCTAAAGGTGCAGTTT+GGG | + | chr8.1:80134021-80134040 | MS.gene07792:CDS | 40.0% |
| ! | CAGGAAAACAGTTGATACAG+TGG | + | chr8.1:80135161-80135180 | MS.gene07792:CDS | 40.0% |
| ! | GAGAAGGATTTTGCTTGGAT+GGG | + | chr8.1:80134768-80134787 | MS.gene07792:CDS | 40.0% |
| ! | GCATGTGTTGAAGGTTAGTT+TGG | + | chr8.1:80134585-80134604 | MS.gene07792:CDS | 40.0% |
| ! | TCTTTTGTAGTGACCAAAGC+AGG | + | chr8.1:80135846-80135865 | MS.gene07792:CDS | 40.0% |
| !! | ACCTCCTTTGAGTATTTTGG+TGG | - | chr8.1:80135233-80135252 | None:intergenic | 40.0% |
| !! | CCTTTGAAGCAAAAACTAGC+AGG | - | chr8.1:80135763-80135782 | None:intergenic | 40.0% |
| !! | CTGATCCTTTTCTAAGGGAA+TGG | + | chr8.1:80134254-80134273 | MS.gene07792:CDS | 40.0% |
| !! | CTGCACCTTTAGGATTGTAT+TGG | - | chr8.1:80134018-80134037 | None:intergenic | 40.0% |
| !! | TTGATGATGGGAAGAAGAGA+AGG | + | chr8.1:80134752-80134771 | MS.gene07792:CDS | 40.0% |
| !!! | AAAAGTGGATTGGGACCTTT+TGG | + | chr8.1:80135737-80135756 | MS.gene07792:CDS | 40.0% |
| !!! | AGGCTGAAGTTTTGGAGAAT+TGG | + | chr8.1:80135672-80135691 | MS.gene07792:CDS | 40.0% |
| !!! | CCTCCTTTGAGTATTTTGGT+GGG | - | chr8.1:80135232-80135251 | None:intergenic | 40.0% |
| !!! | CCTGCTAGTTTTTGCTTCAA+AGG | + | chr8.1:80135760-80135779 | MS.gene07792:CDS | 40.0% |
| AAAGATGGCTGGATCTAGTG+GGG | - | chr8.1:80134095-80134114 | None:intergenic | 45.0% | |
| ACAGATTGATCACTCTGTGG+TGG | + | chr8.1:80136394-80136413 | MS.gene07792:intron | 45.0% | |
| CACCCTTTGCATTCAGCTAA+AGG | + | chr8.1:80134472-80134491 | MS.gene07792:CDS | 45.0% | |
| CCCACCAAAATACTCAAAGG+AGG | + | chr8.1:80135229-80135248 | MS.gene07792:CDS | 45.0% | |
| CGATGTTAGGCATGTGTTGA+AGG | + | chr8.1:80134576-80134595 | MS.gene07792:CDS | 45.0% | |
| GAAAGATGGCTGGATCTAGT+GGG | - | chr8.1:80134096-80134115 | None:intergenic | 45.0% | |
| GCAAAAACTAGCAGGCCAAA+AGG | - | chr8.1:80135755-80135774 | None:intergenic | 45.0% | |
| GCTCCTCAAACCCTTTATCA+GGG | - | chr8.1:80134672-80134691 | None:intergenic | 45.0% | |
| GCTGGTGTGACACCATTAAT+TGG | - | chr8.1:80135265-80135284 | None:intergenic | 45.0% | |
| GGATCAGCCACAATACTTCA+TGG | + | chr8.1:80134151-80134170 | MS.gene07792:CDS | 45.0% | |
| GGCCAATGTAGGATAAACTC+TGG | - | chr8.1:80136456-80136475 | None:intergenic | 45.0% | |
| GTGCCTTTAGCTGAATGCAA+AGG | - | chr8.1:80134478-80134497 | None:intergenic | 45.0% | |
| TGCTCCTCAAACCCTTTATC+AGG | - | chr8.1:80134673-80134692 | None:intergenic | 45.0% | |
| TGGCCCACCAAAATACTCAA+AGG | + | chr8.1:80135226-80135245 | MS.gene07792:CDS | 45.0% | |
| TGTCCCTGATAAAGGGTTTG+AGG | + | chr8.1:80134666-80134685 | MS.gene07792:CDS | 45.0% | |
| TTTCCCCAAACTGCACCTTT+AGG | - | chr8.1:80134028-80134047 | None:intergenic | 45.0% | |
| ! | GGTCTGGAATTCATGTGAGT+TGG | + | chr8.1:80134833-80134852 | MS.gene07792:intron | 45.0% |
| ! | TTGCATTCAGCTAAAGGCAC+TGG | + | chr8.1:80134478-80134497 | MS.gene07792:CDS | 45.0% |
| !! | AGCTAAAGGCACTGGAATGT+GGG | + | chr8.1:80134486-80134505 | MS.gene07792:CDS | 45.0% |
| !! | ATTTTGGTGGGCCATTTGAC+AGG | - | chr8.1:80135220-80135239 | None:intergenic | 45.0% |
| !!! | TGGAGAGTTTTGGAGGAGAA+GGG | + | chr8.1:80136414-80136433 | MS.gene07792:CDS | 45.0% |
| !! | ATTAATCAAAAAAATTAAAA+AGG | + | chr8.1:80133773-80133792 | MS.gene07792:intron | 5.0% |
| ACTGGGTGGTTAGGCAAAGA+TGG | + | chr8.1:80134355-80134374 | MS.gene07792:CDS | 50.0% | |
| GATCCAACAACTGGGTGGTT+AGG | + | chr8.1:80134346-80134365 | MS.gene07792:CDS | 50.0% | |
| GGAAAGATGGCTGGATCTAG+TGG | - | chr8.1:80134097-80134116 | None:intergenic | 50.0% | |
| GGACGGTTGAGATGGAAAGA+TGG | - | chr8.1:80134110-80134129 | None:intergenic | 50.0% | |
| GGGCAAAGACAAACCTGCTT+TGG | - | chr8.1:80135862-80135881 | None:intergenic | 50.0% | |
| GGTTGAGATGGAAAGATGGC+TGG | - | chr8.1:80134106-80134125 | None:intergenic | 50.0% | |
| GTTGATACAGTGGCCAGTTG+TGG | + | chr8.1:80135171-80135190 | MS.gene07792:CDS | 50.0% | |
| TTAGGGATCCAACAACTGGG+TGG | + | chr8.1:80134341-80134360 | MS.gene07792:CDS | 50.0% | |
| TTGCCTAACCACCCAGTTGT+TGG | - | chr8.1:80134352-80134371 | None:intergenic | 50.0% | |
| !! | CACTCTGTGGTGGAGAGTTT+TGG | + | chr8.1:80136404-80136423 | MS.gene07792:CDS | 50.0% |
| !! | CAGCTAAAGGCACTGGAATG+TGG | + | chr8.1:80134485-80134504 | MS.gene07792:CDS | 50.0% |
| !! | TCTGTGGTGGAGAGTTTTGG+AGG | + | chr8.1:80136407-80136426 | MS.gene07792:CDS | 50.0% |
| !!! | GAGTTTTGGAGGAGAAGGGA+AGG | + | chr8.1:80136418-80136437 | MS.gene07792:CDS | 50.0% |
| !!! | GTGGAGAGTTTTGGAGGAGA+AGG | + | chr8.1:80136413-80136432 | MS.gene07792:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 80132870 | 80136586 | 80132870 | ID=MS.gene07792 |
| chr8.1 | mRNA | 80132870 | 80136586 | 80132870 | ID=MS.gene07792.t1;Parent=MS.gene07792 |
| chr8.1 | exon | 80132870 | 80133053 | 80132870 | ID=MS.gene07792.t1.exon1;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80132870 | 80133053 | 80132870 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80133214 | 80133222 | 80133214 | ID=MS.gene07792.t1.exon2;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80133214 | 80133222 | 80133214 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80133978 | 80134846 | 80133978 | ID=MS.gene07792.t1.exon3;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80133978 | 80134846 | 80133978 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80135130 | 80135288 | 80135130 | ID=MS.gene07792.t1.exon4;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80135130 | 80135288 | 80135130 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80135632 | 80135867 | 80135632 | ID=MS.gene07792.t1.exon5;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80135632 | 80135867 | 80135632 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80136014 | 80136104 | 80136014 | ID=MS.gene07792.t1.exon6;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80136014 | 80136104 | 80136014 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| chr8.1 | exon | 80136398 | 80136586 | 80136398 | ID=MS.gene07792.t1.exon7;Parent=MS.gene07792.t1 |
| chr8.1 | CDS | 80136398 | 80136586 | 80136398 | ID=cds.MS.gene07792.t1;Parent=MS.gene07792.t1 |
| Gene Sequence |
| Protein sequence |
