Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84374.t1 | XP_003598253.1 | 95.3 | 491 | 23 | 0 | 1 | 491 | 1 | 491 | 9.80E-263 | 915.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84374.t1 | Q5B5X8 | 33.4 | 341 | 169 | 14 | 176 | 469 | 59 | 388 | 9.5e-41 | 169.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84374.t1 | G7IYK7 | 95.3 | 491 | 23 | 0 | 1 | 491 | 1 | 491 | 7.0e-263 | 915.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene84374 | -0.815503 | 8.94E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene84374 | -0.810032 | 1.41E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene84374 | -0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene84374 | -0.819461 | 1.15E-52 | -1.69E-46 |
| MS.gene050380 | MS.gene84374 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene84374 | 0.823568 | 1.29E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene84374 | -0.814822 | 1.27E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene84374 | -0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene84374 | -0.802056 | 6.72E-49 | -1.69E-46 |
| MS.gene050553 | MS.gene84374 | -0.813503 | 2.48E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene84374 | -0.853324 | 2.58E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene84374 | -0.854559 | 1.14E-61 | -1.69E-46 |
| MS.gene051044 | MS.gene84374 | 0.806368 | 8.51E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene84374 | 0.828992 | 6.60E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene84374 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene84374 | -0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene052066 | MS.gene84374 | -0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene84374 | -0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene84374 | -0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene84374 | 0.800832 | 1.20E-48 | -1.69E-46 |
| MS.gene054054 | MS.gene84374 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene84374 | -0.80507 | 1.59E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene84374 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene84374 | 0.839382 | 1.64E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene84374 | -0.829601 | 4.70E-55 | -1.69E-46 |
| MS.gene056313 | MS.gene84374 | 0.812424 | 4.27E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene84374 | -0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene84374 | -0.836451 | 9.28E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene84374 | -0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene84374 | -0.843389 | 1.44E-58 | -1.69E-46 |
| MS.gene057291 | MS.gene84374 | 0.803971 | 2.70E-49 | -1.69E-46 |
| MS.gene058093 | MS.gene84374 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene84374 | 0.836625 | 8.39E-57 | -1.69E-46 |
| MS.gene058108 | MS.gene84374 | 0.809685 | 1.67E-50 | -1.69E-46 |
| MS.gene058109 | MS.gene84374 | 0.806632 | 7.48E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene84374 | -0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene84374 | 0.865821 | 4.47E-65 | -1.69E-46 |
| MS.gene058173 | MS.gene84374 | 0.862357 | 5.37E-64 | -1.69E-46 |
| MS.gene058175 | MS.gene84374 | 0.867391 | 1.42E-65 | -1.69E-46 |
| MS.gene058179 | MS.gene84374 | 0.81511 | 1.09E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene84374 | 0.816518 | 5.31E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene84374 | 0.863681 | 2.09E-64 | -1.69E-46 |
| MS.gene059038 | MS.gene84374 | 0.821703 | 3.51E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene84374 | 0.880441 | 5.48E-70 | -1.69E-46 |
| MS.gene059223 | MS.gene84374 | 0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene84374 | -0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene84374 | 0.834096 | 3.65E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene84374 | -0.835179 | 1.95E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene84374 | -0.812619 | 3.87E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene84374 | -0.800613 | 1.33E-48 | -1.69E-46 |
| MS.gene060593 | MS.gene84374 | 0.816268 | 6.04E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene84374 | 0.803781 | 2.96E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene84374 | -0.830265 | 3.24E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene84374 | -0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene84374 | -0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene84374 | 0.815354 | 9.65E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84374.t1 | MTR_3g009020 | 95.316 | 491 | 23 | 0 | 1 | 491 | 1 | 491 | 0.0 | 976 |
| MS.gene84374.t1 | MTR_3g009010 | 83.974 | 468 | 73 | 2 | 6 | 473 | 97 | 562 | 0.0 | 818 |
| MS.gene84374.t1 | MTR_3g009030 | 82.415 | 472 | 81 | 2 | 3 | 473 | 27 | 497 | 0.0 | 815 |
| MS.gene84374.t1 | MTR_3g008960 | 80.556 | 468 | 87 | 2 | 6 | 473 | 26 | 489 | 0.0 | 783 |
| MS.gene84374.t1 | MTR_8g091310 | 66.597 | 476 | 154 | 3 | 3 | 473 | 31 | 506 | 0.0 | 678 |
| MS.gene84374.t1 | MTR_5g062190 | 57.708 | 480 | 190 | 7 | 3 | 473 | 32 | 507 | 0.0 | 575 |
| MS.gene84374.t1 | MTR_5g062290 | 55.907 | 474 | 198 | 6 | 7 | 473 | 36 | 505 | 0.0 | 555 |
| MS.gene84374.t1 | MTR_3g086750 | 49.792 | 480 | 228 | 9 | 2 | 473 | 31 | 505 | 1.36e-162 | 471 |
| MS.gene84374.t1 | MTR_4g035760 | 50.407 | 123 | 60 | 1 | 352 | 473 | 57 | 179 | 5.42e-39 | 140 |
| MS.gene84374.t1 | MTR_5g061980 | 56.075 | 107 | 45 | 2 | 141 | 246 | 87 | 192 | 4.63e-35 | 134 |
| MS.gene84374.t1 | MTR_5g061980 | 46.739 | 92 | 47 | 2 | 329 | 418 | 219 | 310 | 2.76e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 108 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTATCAAGGCACAAAT+TGG | 0.213760 | 3.1:-4477980 | MS.gene84374:CDS |
| TGCATTACTACAATATGTTT+TGG | 0.227561 | 3.1:-4475992 | MS.gene84374:CDS |
| TTCAGATTTATGTCACAAAA+TGG | 0.249547 | 3.1:-4477709 | MS.gene84374:CDS |
| CAACATTTGGATGGGCTTAT+TGG | 0.274922 | 3.1:-4475635 | MS.gene84374:CDS |
| AAGAAACATTTCAGATTATA+AGG | 0.276821 | 3.1:-4478789 | MS.gene84374:CDS |
| GCAATTGAAGGTTCTCAAAA+TGG | 0.284192 | 3.1:-4476696 | MS.gene84374:CDS |
| ATTGCGCTTGGGCGAAGTTT+TGG | 0.287207 | 3.1:+4475676 | None:intergenic |
| CTTAGGTGGGTTTGGATCAT+AGG | 0.304194 | 3.1:+4477648 | None:intergenic |
| AAGACTTGAGGGGCTCTATC+TGG | 0.327001 | 3.1:+4477876 | None:intergenic |
| GCCAACCGTGATTCACCTTC+TGG | 0.344327 | 3.1:-4479164 | MS.gene84374:CDS |
| GCTCTTCTCTCATTTGTTAG+TGG | 0.361357 | 3.1:-4476038 | MS.gene84374:CDS |
| AATCAATCACAGCGACTGTC+TGG | 0.363135 | 3.1:+4476616 | None:intergenic |
| ACAAAAGGCTTAGGTGGGTT+TGG | 0.374973 | 3.1:+4477640 | None:intergenic |
| AAACTTCGCCCAAGCGCAAT+TGG | 0.377941 | 3.1:-4475673 | MS.gene84374:CDS |
| ACGATTAAACTGGCATTTGT+AGG | 0.378607 | 3.1:+4475611 | None:intergenic |
| TATGGTAATAAACCAAGTTT+AGG | 0.379061 | 3.1:-4476203 | MS.gene84374:CDS |
| CGCAATTGGATGTGTATTCT+CGG | 0.384741 | 3.1:-4475659 | MS.gene84374:CDS |
| GTTGAACACCCTAAAATTGA+AGG | 0.385361 | 3.1:+4478885 | None:intergenic |
| CAAAATGGCAATGAACATAG+TGG | 0.392126 | 3.1:-4476681 | MS.gene84374:CDS |
| GTGTATTCTCGGGCAACATT+TGG | 0.393337 | 3.1:-4475648 | MS.gene84374:CDS |
| TCATTAATTTGCAGCTTTGG+AGG | 0.400954 | 3.1:-4478921 | MS.gene84374:intron |
| ATAGAGCCCCTCAAGTCTTA+AGG | 0.401028 | 3.1:-4477872 | MS.gene84374:CDS |
| CCATACAAAGCTGTGAATCT+AGG | 0.407481 | 3.1:-4479451 | MS.gene84374:CDS |
| AAGCTGTGAATCTAGGAAAC+TGG | 0.408682 | 3.1:-4479444 | MS.gene84374:CDS |
| CCGTGATTCACCTTCTGGTT+GGG | 0.412087 | 3.1:-4479159 | MS.gene84374:CDS |
| CAAGAGATGGATATATAGAA+TGG | 0.417101 | 3.1:-4476656 | MS.gene84374:CDS |
| CCTAGATTCACAGCTTTGTA+TGG | 0.417981 | 3.1:+4479451 | None:intergenic |
| ATGAAACCTTCTCTCTTTGA+AGG | 0.421541 | 3.1:-4479403 | MS.gene84374:CDS |
| AAGAGATGGATATATAGAAT+GGG | 0.434894 | 3.1:-4476655 | MS.gene84374:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.439502 | 3.1:-4477900 | MS.gene84374:CDS |
| AGCTCTATTCCTCCTAAACT+TGG | 0.449256 | 3.1:+4476191 | None:intergenic |
| TTCTCGGGCAACATTTGGAT+GGG | 0.450046 | 3.1:-4475643 | MS.gene84374:CDS |
| ATTCGAATCAAATCATCAAA+TGG | 0.450667 | 3.1:-4478745 | MS.gene84374:CDS |
| TGAGACTCCAACGATTAAAC+TGG | 0.451572 | 3.1:+4475601 | None:intergenic |
| TAGAGCCCCTCAAGTCTTAA+GGG | 0.451932 | 3.1:-4477871 | MS.gene84374:intron |
| AGGAAACTGGCTTGTGGCTG+AGG | 0.454412 | 3.1:-4479431 | MS.gene84374:CDS |
| AAATATCTTTGTGCTGAAGA+TGG | 0.456726 | 3.1:-4479206 | MS.gene84374:CDS |
| TTCTCACCCTTAAGACTTGA+GGG | 0.457721 | 3.1:+4477865 | None:intergenic |
| ACTGGCTTGTGGCTGAGGGG+TGG | 0.464834 | 3.1:-4479426 | MS.gene84374:CDS |
| TGAAATGTTTCTTTGTTGCT+AGG | 0.466396 | 3.1:+4478799 | None:intergenic |
| AATATCTTTGTGCTGAAGAT+GGG | 0.475550 | 3.1:-4479205 | MS.gene84374:CDS |
| GAAAGAGCATCAGATCTTGC+TGG | 0.479776 | 3.1:-4475918 | MS.gene84374:CDS |
| TGTTTGATTTGCAGGACCAT+TGG | 0.480288 | 3.1:-4477756 | MS.gene84374:intron |
| TAGGCTATCCACCATCCAAC+AGG | 0.491070 | 3.1:+4477667 | None:intergenic |
| CCACAATCACTTTCATCCCA+TGG | 0.493223 | 3.1:+4476727 | None:intergenic |
| AATTGTCAACAAAGATCTCT+TGG | 0.493359 | 3.1:-4479380 | MS.gene84374:intron |
| GGAAACTGGCTTGTGGCTGA+GGG | 0.494595 | 3.1:-4479430 | MS.gene84374:CDS |
| GTGGACTTGCATGCAATTGA+AGG | 0.498572 | 3.1:-4476708 | MS.gene84374:CDS |
| CATTAATTTGCAGCTTTGGA+GGG | 0.502035 | 3.1:-4478920 | MS.gene84374:intron |
| ATTCTCGGGCAACATTTGGA+TGG | 0.503691 | 3.1:-4475644 | MS.gene84374:CDS |
| AATACACATCCAATTGCGCT+TGG | 0.507025 | 3.1:+4475664 | None:intergenic |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3.1:-4477600 | MS.gene84374:CDS |
| TTTGTGGGGTTAAATACTAT+AGG | 0.509718 | 3.1:-4478856 | MS.gene84374:CDS |
| ACCGTGATTCACCTTCTGGT+TGG | 0.512311 | 3.1:-4479160 | MS.gene84374:CDS |
| GGAGAGTACCAACTTACTAA+TGG | 0.515314 | 3.1:-4477906 | MS.gene84374:CDS |
| GACCATAACCATTAGTAAGT+TGG | 0.516537 | 3.1:+4477898 | None:intergenic |
| AAATTATCAAGGCACAAATT+GGG | 0.518686 | 3.1:-4477979 | MS.gene84374:CDS |
| AAAATGGATTAGATGCTGTC+AGG | 0.519664 | 3.1:-4477693 | MS.gene84374:CDS |
| ATCAATCACAGCGACTGTCT+GGG | 0.521320 | 3.1:+4476617 | None:intergenic |
| TAGGGGAATGGACGGGTGAG+TGG | 0.529808 | 3.1:-4475728 | MS.gene84374:CDS |
| CTCAAGTGGATGATCGAGAA+TGG | 0.534717 | 3.1:-4475582 | MS.gene84374:CDS |
| GGTAATAAACCAAGTTTAGG+AGG | 0.535992 | 3.1:-4476200 | MS.gene84374:CDS |
| ATACACATCCAATTGCGCTT+GGG | 0.537002 | 3.1:+4475665 | None:intergenic |
| TGTGATCATGTCAAATCCAT+TGG | 0.540561 | 3.1:-4476075 | MS.gene84374:CDS |
| GCTTTAGAATCTCCATCCAA+TGG | 0.542610 | 3.1:+4476059 | None:intergenic |
| GAACATAGTGGGACAAGAGA+TGG | 0.543354 | 3.1:-4476669 | MS.gene84374:CDS |
| ACCAACAGATAGCTTTCGAC+AGG | 0.544967 | 3.1:-4475532 | MS.gene84374:CDS |
| TGAATCACGGTTGGCTACAA+TGG | 0.548514 | 3.1:+4479172 | None:intergenic |
| ACAAATGCCAGTTTAATCGT+TGG | 0.551584 | 3.1:-4475608 | MS.gene84374:CDS |
| ACAATTCCTTCAAAGAGAGA+AGG | 0.552174 | 3.1:+4479397 | None:intergenic |
| CCATGGGATGAAAGTGATTG+TGG | 0.555733 | 3.1:-4476727 | MS.gene84374:CDS |
| GCAATTGGATGTGTATTCTC+GGG | 0.557257 | 3.1:-4475658 | MS.gene84374:CDS |
| ATTCTCACCCTTAAGACTTG+AGG | 0.559378 | 3.1:+4477864 | None:intergenic |
| TCCTGTCGAAAGCTATCTGT+TGG | 0.560585 | 3.1:+4475531 | None:intergenic |
| CAGTTATGTATGAATTCCAA+TGG | 0.561323 | 3.1:+4477740 | None:intergenic |
| GGGTTAAATACTATAGGAGG+AGG | 0.574219 | 3.1:-4478850 | MS.gene84374:CDS |
| ATATCTTTGTGCTGAAGATG+GGG | 0.574479 | 3.1:-4479204 | MS.gene84374:CDS |
| ACAATTGTAAACACATTACA+AGG | 0.575947 | 3.1:-4477927 | MS.gene84374:CDS |
| TTAGTGACAGCAAATTATCA+AGG | 0.576262 | 3.1:-4477990 | MS.gene84374:CDS |
| CTGTCAGGATACCTGTTGGA+TGG | 0.577394 | 3.1:-4477678 | MS.gene84374:CDS |
| CCCCAACAAAAGGCTTAGGT+GGG | 0.579618 | 3.1:+4477635 | None:intergenic |
| AGATTCACAGCTTTGTATGG+CGG | 0.583970 | 3.1:+4479454 | None:intergenic |
| TTGGGATGACAATGATCCAT+CGG | 0.585148 | 3.1:-4477961 | MS.gene84374:CDS |
| TTAATCGTTGGAGTCTCAAG+TGG | 0.586204 | 3.1:-4475596 | MS.gene84374:CDS |
| GTGGGGTTAAATACTATAGG+AGG | 0.586439 | 3.1:-4478853 | MS.gene84374:CDS |
| GAAACTGGCTTGTGGCTGAG+GGG | 0.589775 | 3.1:-4479429 | MS.gene84374:CDS |
| TTGAATGTTTCCCAACCAGA+AGG | 0.591163 | 3.1:+4479149 | None:intergenic |
| ACCAGAAGGTGAATCACGGT+TGG | 0.595609 | 3.1:+4479163 | None:intergenic |
| ATCATGTCAAATCCATTGGA+TGG | 0.600387 | 3.1:-4476071 | MS.gene84374:CDS |
| CCCAACCAGAAGGTGAATCA+CGG | 0.605815 | 3.1:+4479159 | None:intergenic |
| TCAATCACAGCGACTGTCTG+GGG | 0.606862 | 3.1:+4476618 | None:intergenic |
| AAAATGGCAATGAACATAGT+GGG | 0.608116 | 3.1:-4476680 | MS.gene84374:CDS |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3.1:+4476000 | None:intergenic |
| ATAGCTTTCGACAGGATGTG+AGG | 0.613651 | 3.1:-4475524 | MS.gene84374:CDS |
| CTATCAAGATTGACACCTTG+TGG | 0.620469 | 3.1:+4476158 | None:intergenic |
| TAGCTTTCGACAGGATGTGA+GGG | 0.624203 | 3.1:-4475523 | MS.gene84374:CDS |
| TGATTGATTTCTTAGCACAA+AGG | 0.624556 | 3.1:-4476602 | MS.gene84374:intron |
| TAGTCTAAAGAAGTATTACA+AGG | 0.625277 | 3.1:-4476138 | MS.gene84374:CDS |
| AGAGATGGATATATAGAATG+GGG | 0.625469 | 3.1:-4476654 | MS.gene84374:CDS |
| TCAGGATACCTGTTGGATGG+TGG | 0.627765 | 3.1:-4477675 | MS.gene84374:CDS |
| GATGCTGTCAGGATACCTGT+TGG | 0.641176 | 3.1:-4477682 | MS.gene84374:CDS |
| TCTCACCCTTAAGACTTGAG+GGG | 0.663932 | 3.1:+4477866 | None:intergenic |
| GAATCTAGGAAACTGGCTTG+TGG | 0.668150 | 3.1:-4479437 | MS.gene84374:CDS |
| TTTATGATTGCAGAAACCAT+GGG | 0.680212 | 3.1:-4476743 | MS.gene84374:intron |
| TATCTTTGTGCTGAAGATGG+GGG | 0.680990 | 3.1:-4479203 | MS.gene84374:CDS |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3.1:-4477599 | MS.gene84374:CDS |
| TGTGAGAAAATACAACTCAG+AGG | 0.726959 | 3.1:-4476102 | MS.gene84374:CDS |
| GAGCTGATGAATGAGCCACA+AGG | 0.730017 | 3.1:-4476173 | MS.gene84374:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTACAATTTAATTAA+AGG | + | chr3.1:4478161-4478180 | None:intergenic | 10.0% |
| !! | TAATACATATATATGAAATA+TGG | - | chr3.1:4479163-4479182 | MS.gene84374:CDS | 10.0% |
| !! | TCTATTTATAAAAGAAATTT+AGG | + | chr3.1:4475972-4475991 | None:intergenic | 10.0% |
| !!! | ATAAAATGAAATATTTTCTT+GGG | + | chr3.1:4477914-4477933 | None:intergenic | 10.0% |
| !!! | ATATCTTTTATAAATATAAC+GGG | + | chr3.1:4475885-4475904 | None:intergenic | 10.0% |
| !!! | TATAAAATGAAATATTTTCT+TGG | + | chr3.1:4477915-4477934 | None:intergenic | 10.0% |
| !!! | TATAATTTTAGATTTTGAAA+TGG | + | chr3.1:4477482-4477501 | None:intergenic | 10.0% |
| !!! | TCTGAAATTTTAAAAAATTT+GGG | + | chr3.1:4477507-4477526 | None:intergenic | 10.0% |
| !!! | TTCTGAAATTTTAAAAAATT+TGG | + | chr3.1:4477508-4477527 | None:intergenic | 10.0% |
| !! | AAATAATTAGAACTTACAAA+GGG | + | chr3.1:4476032-4476051 | None:intergenic | 15.0% |
| !! | AATTTGAACTTCTTAATATT+AGG | + | chr3.1:4475673-4475692 | None:intergenic | 15.0% |
| !! | AGATAATTTATATGATTTGA+TGG | + | chr3.1:4476556-4476575 | None:intergenic | 15.0% |
| !! | GATTTCAAATTTAAAAATGT+CGG | - | chr3.1:4478085-4478104 | MS.gene84374:intron | 15.0% |
| !! | GTTATGTTAAATTAAAAATG+AGG | + | chr3.1:4476752-4476771 | None:intergenic | 15.0% |
| !!! | ATATGTTTTTTCTTTTTGTA+GGG | - | chr3.1:4479229-4479248 | MS.gene84374:CDS | 15.0% |
| !!! | GTTTGATCATTTTAATAAAT+TGG | + | chr3.1:4476842-4476861 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTAAATAAACTTT+TGG | + | chr3.1:4478144-4478163 | None:intergenic | 15.0% |
| !!! | TATATGTTTTTTCTTTTTGT+AGG | - | chr3.1:4479228-4479247 | MS.gene84374:CDS | 15.0% |
| !!! | TGTTTTGAAACTTTAAAAAT+TGG | - | chr3.1:4478054-4478073 | MS.gene84374:intron | 15.0% |
| !!! | TTAAAATTTAGATGTACTTT+TGG | - | chr3.1:4477426-4477445 | MS.gene84374:intron | 15.0% |
| !! | AAAAAAAACTCCAAATTCAA+TGG | - | chr3.1:4478024-4478043 | MS.gene84374:intron | 20.0% |
| !! | AAAAAGTAAAAATACTCCAT+CGG | + | chr3.1:4475996-4476015 | None:intergenic | 20.0% |
| !! | AACTCATGCATATTATATAT+TGG | - | chr3.1:4479198-4479217 | MS.gene84374:CDS | 20.0% |
| !! | AAGAAACATTTCAGATTATA+AGG | - | chr3.1:4476186-4476205 | MS.gene84374:CDS | 20.0% |
| !! | AATGTATCTGGTTAAAAAAT+TGG | + | chr3.1:4475937-4475956 | None:intergenic | 20.0% |
| !! | ACTCATGCATATTATATATT+GGG | - | chr3.1:4479199-4479218 | MS.gene84374:CDS | 20.0% |
| !! | ATAAATGAAGAATATATGAG+AGG | - | chr3.1:4478483-4478502 | MS.gene84374:intron | 20.0% |
| !! | ATCTAATTTCTTCTCTATAT+TGG | - | chr3.1:4478414-4478433 | MS.gene84374:intron | 20.0% |
| !! | CAAATAATTAGAACTTACAA+AGG | + | chr3.1:4476033-4476052 | None:intergenic | 20.0% |
| !! | GTAACATAAAGAAACAATTT+AGG | + | chr3.1:4476404-4476423 | None:intergenic | 20.0% |
| !! | TCACAAGTGATATTATAAAA+GGG | + | chr3.1:4477971-4477990 | None:intergenic | 20.0% |
| !!! | AATGCTCTAAATAAAATTGA+GGG | + | chr3.1:4475628-4475647 | None:intergenic | 20.0% |
| !!! | ACATACACACAATTATTTTT+TGG | + | chr3.1:4475700-4475719 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTATGATGCATT+AGG | + | chr3.1:4478014-4478033 | None:intergenic | 20.0% |
| !!! | TATGTTTTTTCTTTTTGTAG+GGG | - | chr3.1:4479230-4479249 | MS.gene84374:CDS | 20.0% |
| !!! | TTTGAAACTTTAAAAATTGG+AGG | - | chr3.1:4478057-4478076 | MS.gene84374:intron | 20.0% |
| !!! | TTTTAATCAAGTTATGTACT+CGG | - | chr3.1:4476306-4476325 | MS.gene84374:intron | 20.0% |
| ! | AAATTATCAAGGCACAAATT+GGG | - | chr3.1:4476996-4477015 | MS.gene84374:intron | 25.0% |
| ! | AAGAACATAATAACCGATAT+AGG | + | chr3.1:4476376-4476395 | None:intergenic | 25.0% |
| ! | AAGAGATGGATATATAGAAT+GGG | - | chr3.1:4478320-4478339 | MS.gene84374:intron | 25.0% |
| ! | ACAATTGTAAACACATTACA+AGG | - | chr3.1:4477048-4477067 | MS.gene84374:intron | 25.0% |
| ! | ACATAAAGAAACAATTTAGG+TGG | + | chr3.1:4476401-4476420 | None:intergenic | 25.0% |
| ! | ATGCATTAGGTTAAAAAATG+AGG | + | chr3.1:4478001-4478020 | None:intergenic | 25.0% |
| ! | ATTCGAATCAAATCATCAAA+TGG | - | chr3.1:4476230-4476249 | MS.gene84374:intron | 25.0% |
| ! | ATTGAGCCTTCATAAATATA+TGG | + | chr3.1:4476957-4476976 | None:intergenic | 25.0% |
| ! | CATCATATATCATATATTCC+TGG | + | chr3.1:4478700-4478719 | None:intergenic | 25.0% |
| ! | CTCATGCATATTATATATTG+GGG | - | chr3.1:4479200-4479219 | MS.gene84374:CDS | 25.0% |
| ! | CTCTAACCATATATTTATGA+AGG | - | chr3.1:4476948-4476967 | MS.gene84374:intron | 25.0% |
| ! | CTTCATAAATATATGGTTAG+AGG | + | chr3.1:4476950-4476969 | None:intergenic | 25.0% |
| ! | GAAAAAAGATGTTATGACAT+TGG | + | chr3.1:4476629-4476648 | None:intergenic | 25.0% |
| ! | GTCACAAGTGATATTATAAA+AGG | + | chr3.1:4477972-4477991 | None:intergenic | 25.0% |
| ! | GTCACATATTGGATATTAAT+AGG | - | chr3.1:4478460-4478479 | MS.gene84374:intron | 25.0% |
| ! | GTGTTCAACAAAAAATTTGT+GGG | - | chr3.1:4476104-4476123 | MS.gene84374:CDS | 25.0% |
| ! | TAAAAGGGAGATATTAACAA+CGG | + | chr3.1:4477956-4477975 | None:intergenic | 25.0% |
| ! | TATAATATGCATGAGTTAGT+TGG | + | chr3.1:4479195-4479214 | None:intergenic | 25.0% |
| ! | TATGGTAATAAACCAAGTTT+AGG | - | chr3.1:4478772-4478791 | MS.gene84374:CDS | 25.0% |
| ! | TATTGGAATTTAAGTATGAG+TGG | - | chr3.1:4478431-4478450 | MS.gene84374:intron | 25.0% |
| ! | TCAACAAAAATTGATGTATC+TGG | - | chr3.1:4475910-4475929 | MS.gene84374:CDS | 25.0% |
| ! | TCAACAAAAGTTAATGTATC+TGG | + | chr3.1:4475949-4475968 | None:intergenic | 25.0% |
| ! | TGTATACAGAATAAATGTAG+TGG | - | chr3.1:4478511-4478530 | MS.gene84374:intron | 25.0% |
| ! | TGTTCAACAAAAAATTTGTG+GGG | - | chr3.1:4476105-4476124 | MS.gene84374:CDS | 25.0% |
| ! | TTCAGATTTATGTCACAAAA+TGG | - | chr3.1:4477266-4477285 | MS.gene84374:intron | 25.0% |
| ! | TTGAACTTCTTAATATTAGG+AGG | + | chr3.1:4475670-4475689 | None:intergenic | 25.0% |
| !! | GAATGCTCTAAATAAAATTG+AGG | + | chr3.1:4475629-4475648 | None:intergenic | 25.0% |
| !! | GCATTACTACAATATGTTTT+GGG | - | chr3.1:4478984-4479003 | MS.gene84374:intron | 25.0% |
| !! | GTTTGATCATTTTCCTATAT+CGG | - | chr3.1:4476360-4476379 | MS.gene84374:intron | 25.0% |
| !! | TCTTTTATAAATAGAACCGA+TGG | - | chr3.1:4475977-4475996 | MS.gene84374:CDS | 25.0% |
| !! | TGCATTACTACAATATGTTT+TGG | - | chr3.1:4478983-4479002 | MS.gene84374:intron | 25.0% |
| !!! | ACAAATGCTCTTACTTTTAT+AGG | - | chr3.1:4479090-4479109 | MS.gene84374:intron | 25.0% |
| !!! | ATCAAATGGTTTATTTTTGC+AGG | - | chr3.1:4476244-4476263 | MS.gene84374:intron | 25.0% |
| !!! | ATGATTTGATTCGAATTTTG+AGG | + | chr3.1:4476226-4476245 | None:intergenic | 25.0% |
| !!! | ATTAAATTTGTTGACAGGTA+TGG | - | chr3.1:4478754-4478773 | MS.gene84374:CDS | 25.0% |
| !!! | CTTGAATTAAATTTGTTGAC+AGG | - | chr3.1:4478749-4478768 | MS.gene84374:CDS | 25.0% |
| !!! | TACACACAATTATTTTTTGG+TGG | + | chr3.1:4475697-4475716 | None:intergenic | 25.0% |
| !!! | TAGTCTAAAGAAGTATTACA+AGG | - | chr3.1:4478837-4478856 | MS.gene84374:CDS | 25.0% |
| !!! | TGATTTGATTCGAATTTTGA+GGG | + | chr3.1:4476225-4476244 | None:intergenic | 25.0% |
| AAAAACTCCAAATTCAATGG+TGG | - | chr3.1:4478027-4478046 | MS.gene84374:intron | 30.0% | |
| AAAACTCCAAATTCAATGGT+GGG | - | chr3.1:4478028-4478047 | MS.gene84374:intron | 30.0% | |
| AAAAGGGAGATATTAACAAC+GGG | + | chr3.1:4477955-4477974 | None:intergenic | 30.0% | |
| AAAATGGCAATGAACATAGT+GGG | - | chr3.1:4478295-4478314 | MS.gene84374:intron | 30.0% | |
| AAATATCTTTGTGCTGAAGA+TGG | - | chr3.1:4475769-4475788 | MS.gene84374:intron | 30.0% | |
| AAGATCTAATCCCAATAACA+TGG | + | chr3.1:4476683-4476702 | None:intergenic | 30.0% | |
| AATATCTTTGTGCTGAAGAT+GGG | - | chr3.1:4475770-4475789 | MS.gene84374:intron | 30.0% | |
| AATCAACTTGACCATGTTAT+TGG | - | chr3.1:4476669-4476688 | MS.gene84374:CDS | 30.0% | |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3.1:4475595-4475614 | MS.gene84374:CDS | 30.0% | |
| AGAGATGGATATATAGAATG+GGG | - | chr3.1:4478321-4478340 | MS.gene84374:intron | 30.0% | |
| ATCAACTTGACCATGTTATT+GGG | - | chr3.1:4476670-4476689 | MS.gene84374:CDS | 30.0% | |
| ATTGTCATATGAAAAACCGA+TGG | + | chr3.1:4477033-4477052 | None:intergenic | 30.0% | |
| CAAATTATCAAGGCACAAAT+TGG | - | chr3.1:4476995-4477014 | MS.gene84374:intron | 30.0% | |
| CAAGAGATGGATATATAGAA+TGG | - | chr3.1:4478319-4478338 | MS.gene84374:intron | 30.0% | |
| CAGTTATGTATGAATTCCAA+TGG | + | chr3.1:4477238-4477257 | None:intergenic | 30.0% | |
| CATTAGGTTAAAAAATGAGG+TGG | + | chr3.1:4477998-4478017 | None:intergenic | 30.0% | |
| GGTGTTCAACAAAAAATTTG+TGG | - | chr3.1:4476103-4476122 | MS.gene84374:CDS | 30.0% | |
| TAATTAGAACTTACAAAGGG+TGG | + | chr3.1:4476029-4476048 | None:intergenic | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3.1:4477075-4477094 | MS.gene84374:intron | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3.1:4478978-4478997 | None:intergenic | 30.0% | |
| TCTATGACTTTCAAACTCAT+TGG | + | chr3.1:4477778-4477797 | None:intergenic | 30.0% | |
| TGAAATGTTTCTTTGTTGCT+AGG | + | chr3.1:4476179-4476198 | None:intergenic | 30.0% | |
| TTAGTGACAGCAAATTATCA+AGG | - | chr3.1:4476985-4477004 | MS.gene84374:intron | 30.0% | |
| TTTATGATTGCAGAAACCAT+GGG | - | chr3.1:4478232-4478251 | MS.gene84374:intron | 30.0% | |
| TTTGTGGGGTTAAATACTAT+AGG | - | chr3.1:4476119-4476138 | MS.gene84374:CDS | 30.0% | |
| ! | AATCCAAATTGATTAGCTAG+AGG | + | chr3.1:4476285-4476304 | None:intergenic | 30.0% |
| ! | TGATTGATTTCTTAGCACAA+AGG | - | chr3.1:4478373-4478392 | MS.gene84374:intron | 30.0% |
| ! | TTGCTTAGATGCATTTTGTA+TGG | + | chr3.1:4479274-4479293 | None:intergenic | 30.0% |
| ! | TTTTATGATTGCAGAAACCA+TGG | - | chr3.1:4478231-4478250 | MS.gene84374:intron | 30.0% |
| ! | TTTTGCTAACAAGTGTCTTA+AGG | + | chr3.1:4477737-4477756 | None:intergenic | 30.0% |
| ! | TTTTTCTTTTTGTAGGGGAA+TGG | - | chr3.1:4479235-4479254 | MS.gene84374:CDS | 30.0% |
| !! | ATTTGATGGATGTTTTCTGA+AGG | + | chr3.1:4476542-4476561 | None:intergenic | 30.0% |
| !! | GACTTGTTGAAATTCTTTGT+TGG | - | chr3.1:4477161-4477180 | MS.gene84374:intron | 30.0% |
| !! | GATTTGATTCGAATTTTGAG+GGG | + | chr3.1:4476224-4476243 | None:intergenic | 30.0% |
| !! | GTTTTCTGAAGGGTTATTAT+GGG | + | chr3.1:4476531-4476550 | None:intergenic | 30.0% |
| !! | TGTTTTCTGAAGGGTTATTA+TGG | + | chr3.1:4476532-4476551 | None:intergenic | 30.0% |
| !! | TTGTGTGTATGTGTTGATTT+AGG | - | chr3.1:4475708-4475727 | MS.gene84374:CDS | 30.0% |
| !! | TTTGATGGATGTTTTCTGAA+GGG | + | chr3.1:4476541-4476560 | None:intergenic | 30.0% |
| !!! | ATGTTTTGGGACAAATTCAA+TGG | - | chr3.1:4478997-4479016 | MS.gene84374:intron | 30.0% |
| AAACTCCAAATTCAATGGTG+GGG | - | chr3.1:4478029-4478048 | MS.gene84374:intron | 35.0% | |
| AAAGGGAGATATTAACAACG+GGG | + | chr3.1:4477954-4477973 | None:intergenic | 35.0% | |
| AAAGGTGGGAAATAGACTAA+CGG | + | chr3.1:4476439-4476458 | None:intergenic | 35.0% | |
| AATTTCTTAACAGCTGTCCT+AGG | + | chr3.1:4477585-4477604 | None:intergenic | 35.0% | |
| ACAAATGCCAGTTTAATCGT+TGG | - | chr3.1:4479367-4479386 | MS.gene84374:intron | 35.0% | |
| ACAATTCCTTCAAAGAGAGA+AGG | + | chr3.1:4475581-4475600 | None:intergenic | 35.0% | |
| ACGATTAAACTGGCATTTGT+AGG | + | chr3.1:4479367-4479386 | None:intergenic | 35.0% | |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3.1:4477376-4477395 | MS.gene84374:intron | 35.0% | |
| ATATCTTTGTGCTGAAGATG+GGG | - | chr3.1:4475771-4475790 | MS.gene84374:intron | 35.0% | |
| ATCATGTCAAATCCATTGGA+TGG | - | chr3.1:4478904-4478923 | MS.gene84374:CDS | 35.0% | |
| ATGAAACCTTCTCTCTTTGA+AGG | - | chr3.1:4475572-4475591 | MS.gene84374:CDS | 35.0% | |
| ATTGCACTAACCGTTGTTAA+AGG | + | chr3.1:4476457-4476476 | None:intergenic | 35.0% | |
| ATTTCTTAACAGCTGTCCTA+GGG | + | chr3.1:4477584-4477603 | None:intergenic | 35.0% | |
| CAAAATGGCAATGAACATAG+TGG | - | chr3.1:4478294-4478313 | MS.gene84374:intron | 35.0% | |
| CATCCTCTAGCTAATCAATT+TGG | - | chr3.1:4476279-4476298 | MS.gene84374:intron | 35.0% | |
| CTATTTCCCACCTTTAACAA+CGG | - | chr3.1:4476444-4476463 | MS.gene84374:intron | 35.0% | |
| CTTGAGAGAAACATACTTGT+AGG | + | chr3.1:4478562-4478581 | None:intergenic | 35.0% | |
| GACCATAACCATTAGTAAGT+TGG | + | chr3.1:4477080-4477099 | None:intergenic | 35.0% | |
| GCAATGGACAAAGACTTTAA+TGG | + | chr3.1:4476493-4476512 | None:intergenic | 35.0% | |
| GCAATTGAAGGTTCTCAAAA+TGG | - | chr3.1:4478279-4478298 | MS.gene84374:intron | 35.0% | |
| GGTAATAAACCAAGTTTAGG+AGG | - | chr3.1:4478775-4478794 | MS.gene84374:CDS | 35.0% | |
| GTTAGAGGATTCACAATTCT+AGG | + | chr3.1:4476935-4476954 | None:intergenic | 35.0% | |
| GTTGAACACCCTAAAATTGA+AGG | + | chr3.1:4476093-4476112 | None:intergenic | 35.0% | |
| TAACCAATGTGTGTGTGATA+GGG | - | chr3.1:4479127-4479146 | MS.gene84374:intron | 35.0% | |
| TGACTTTCAAACTCATTGGT+CGG | + | chr3.1:4477774-4477793 | None:intergenic | 35.0% | |
| TGGAATTTAAGTATGAGTGG+TGG | - | chr3.1:4478434-4478453 | MS.gene84374:intron | 35.0% | |
| TGTGAGAAAATACAACTCAG+AGG | - | chr3.1:4478873-4478892 | MS.gene84374:CDS | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3.1:4478900-4478919 | MS.gene84374:CDS | 35.0% | |
| ! | ACGACTCATCCTTCAATTTT+AGG | - | chr3.1:4476081-4476100 | MS.gene84374:CDS | 35.0% |
| ! | CAAATTGATTAGCTAGAGGA+TGG | + | chr3.1:4476281-4476300 | None:intergenic | 35.0% |
| ! | CGACTCATCCTTCAATTTTA+GGG | - | chr3.1:4476082-4476101 | MS.gene84374:CDS | 35.0% |
| ! | TTTTCACTTGCAAAGTAGCT+TGG | - | chr3.1:4476644-4476663 | MS.gene84374:CDS | 35.0% |
| !! | AAAATGGATTAGATGCTGTC+AGG | - | chr3.1:4477282-4477301 | MS.gene84374:intron | 35.0% |
| !! | CATTAATTTGCAGCTTTGGA+GGG | - | chr3.1:4476055-4476074 | MS.gene84374:CDS | 35.0% |
| !! | GTGTATGTGTTGATTTAGGA+TGG | - | chr3.1:4475712-4475731 | MS.gene84374:CDS | 35.0% |
| !! | TCATTAATTTGCAGCTTTGG+AGG | - | chr3.1:4476054-4476073 | MS.gene84374:CDS | 35.0% |
| !! | TGCTCATTAATTTGCAGCTT+TGG | - | chr3.1:4476051-4476070 | MS.gene84374:CDS | 35.0% |
| !! | TTGAGCTTTGTTTGATTTGC+AGG | - | chr3.1:4477211-4477230 | MS.gene84374:intron | 35.0% |
| AAGCTGTGAATCTAGGAAAC+TGG | - | chr3.1:4475531-4475550 | MS.gene84374:CDS | 40.0% | |
| AATACACATCCAATTGCGCT+TGG | + | chr3.1:4479314-4479333 | None:intergenic | 40.0% | |
| ACATTCCCCACCATTGAATT+TGG | + | chr3.1:4478037-4478056 | None:intergenic | 40.0% | |
| AGCTCTATTCCTCCTAAACT+TGG | + | chr3.1:4478787-4478806 | None:intergenic | 40.0% | |
| ATACACATCCAATTGCGCTT+GGG | + | chr3.1:4479313-4479332 | None:intergenic | 40.0% | |
| ATTCTCACCCTTAAGACTTG+AGG | + | chr3.1:4477114-4477133 | None:intergenic | 40.0% | |
| CACTAACCGTTGTTAAAGGT+GGG | + | chr3.1:4476453-4476472 | None:intergenic | 40.0% | |
| CACTTGACAATGCTTTCACA+TGG | - | chr3.1:4477375-4477394 | MS.gene84374:intron | 40.0% | |
| CCATACAAAGCTGTGAATCT+AGG | - | chr3.1:4475524-4475543 | MS.gene84374:CDS | 40.0% | |
| CGCAATTGGATGTGTATTCT+CGG | - | chr3.1:4479316-4479335 | MS.gene84374:intron | 40.0% | |
| CTAACCAATGTGTGTGTGAT+AGG | - | chr3.1:4479126-4479145 | MS.gene84374:intron | 40.0% | |
| CTATCAAGATTGACACCTTG+TGG | + | chr3.1:4478820-4478839 | None:intergenic | 40.0% | |
| GCAATTGGATGTGTATTCTC+GGG | - | chr3.1:4479317-4479336 | MS.gene84374:intron | 40.0% | |
| GGGTTAAATACTATAGGAGG+AGG | - | chr3.1:4476125-4476144 | MS.gene84374:CDS | 40.0% | |
| GTGGGGTTAAATACTATAGG+AGG | - | chr3.1:4476122-4476141 | MS.gene84374:CDS | 40.0% | |
| TATCTTTGTGCTGAAGATGG+GGG | - | chr3.1:4475772-4475791 | MS.gene84374:intron | 40.0% | |
| TCCACTCACACTTAAATTCC+AGG | - | chr3.1:4478679-4478698 | MS.gene84374:intron | 40.0% | |
| TCCTGGAATTTAAGTGTGAG+TGG | + | chr3.1:4478683-4478702 | None:intergenic | 40.0% | |
| TGAGACTCCAACGATTAAAC+TGG | + | chr3.1:4479377-4479396 | None:intergenic | 40.0% | |
| TGTCTTAATCGTTGCTGACA+GGG | + | chr3.1:4476592-4476611 | None:intergenic | 40.0% | |
| TTAATCGTTGGAGTCTCAAG+TGG | - | chr3.1:4479379-4479398 | MS.gene84374:intron | 40.0% | |
| TTATGGGAGACATATTCTCG+CGG | + | chr3.1:4476515-4476534 | None:intergenic | 40.0% | |
| TTCTCACCCTTAAGACTTGA+GGG | + | chr3.1:4477113-4477132 | None:intergenic | 40.0% | |
| TTGAATGTTTCCCAACCAGA+AGG | + | chr3.1:4475829-4475848 | None:intergenic | 40.0% | |
| TTGGGATGACAATGATCCAT+CGG | - | chr3.1:4477014-4477033 | MS.gene84374:intron | 40.0% | |
| ! | AGATTCACAGCTTTGTATGG+CGG | + | chr3.1:4475524-4475543 | None:intergenic | 40.0% |
| ! | AGTGGTGGTTAGTCACATAT+TGG | - | chr3.1:4478449-4478468 | MS.gene84374:intron | 40.0% |
| ! | CAACATTTGGATGGGCTTAT+TGG | - | chr3.1:4479340-4479359 | MS.gene84374:intron | 40.0% |
| ! | CACACACATTGGTTAGGATT+TGG | + | chr3.1:4479122-4479141 | None:intergenic | 40.0% |
| ! | CCTAGATTCACAGCTTTGTA+TGG | + | chr3.1:4475527-4475546 | None:intergenic | 40.0% |
| ! | CTATCACACACACATTGGTT+AGG | + | chr3.1:4479128-4479147 | None:intergenic | 40.0% |
| ! | CTTTTCTCGAATCACTGACA+TGG | + | chr3.1:4476713-4476732 | None:intergenic | 40.0% |
| ! | GCTCTTCTCTCATTTGTTAG+TGG | - | chr3.1:4478937-4478956 | MS.gene84374:intron | 40.0% |
| ! | TCTTTTTGTAGGGGAATGGA+CGG | - | chr3.1:4479239-4479258 | MS.gene84374:CDS | 40.0% |
| !! | GAAATGCTAAAAAGTGCCCT+AGG | - | chr3.1:4477565-4477584 | MS.gene84374:intron | 40.0% |
| !! | GCTTTAGAATCTCCATCCAA+TGG | + | chr3.1:4478919-4478938 | None:intergenic | 40.0% |
| !! | GGAGAGTACCAACTTACTAA+TGG | - | chr3.1:4477069-4477088 | MS.gene84374:intron | 40.0% |
| !! | TGTTTGATTTGCAGGACCAT+TGG | - | chr3.1:4477219-4477238 | MS.gene84374:intron | 40.0% |
| AATCAATCACAGCGACTGTC+TGG | + | chr3.1:4478362-4478381 | None:intergenic | 45.0% | |
| ACCAACAGATAGCTTTCGAC+AGG | - | chr3.1:4479443-4479462 | MS.gene84374:CDS | 45.0% | |
| ATAGAGCCCCTCAAGTCTTA+AGG | - | chr3.1:4477103-4477122 | MS.gene84374:intron | 45.0% | |
| ATAGCTTTCGACAGGATGTG+AGG | - | chr3.1:4479451-4479470 | MS.gene84374:CDS | 45.0% | |
| ATCAATCACAGCGACTGTCT+GGG | + | chr3.1:4478361-4478380 | None:intergenic | 45.0% | |
| ATTCTCGGGCAACATTTGGA+TGG | - | chr3.1:4479331-4479350 | MS.gene84374:intron | 45.0% | |
| CATCCCTATCACACACACAT+TGG | + | chr3.1:4479133-4479152 | None:intergenic | 45.0% | |
| CCACAATCACTTTCATCCCA+TGG | + | chr3.1:4478251-4478270 | None:intergenic | 45.0% | |
| CCATGGGATGAAAGTGATTG+TGG | - | chr3.1:4478248-4478267 | MS.gene84374:intron | 45.0% | |
| CTCAAGTGGATGATCGAGAA+TGG | - | chr3.1:4479393-4479412 | MS.gene84374:CDS | 45.0% | |
| GCACTAACCGTTGTTAAAGG+TGG | + | chr3.1:4476454-4476473 | None:intergenic | 45.0% | |
| GTGGACTTGCATGCAATTGA+AGG | - | chr3.1:4478267-4478286 | MS.gene84374:intron | 45.0% | |
| GTGTATTCTCGGGCAACATT+TGG | - | chr3.1:4479327-4479346 | MS.gene84374:intron | 45.0% | |
| GTGTCTTAATCGTTGCTGAC+AGG | + | chr3.1:4476593-4476612 | None:intergenic | 45.0% | |
| TAGAGCCCCTCAAGTCTTAA+GGG | - | chr3.1:4477104-4477123 | MS.gene84374:intron | 45.0% | |
| TAGCTTTCGACAGGATGTGA+GGG | - | chr3.1:4479452-4479471 | MS.gene84374:CDS | 45.0% | |
| TCCTGTCGAAAGCTATCTGT+TGG | + | chr3.1:4479447-4479466 | None:intergenic | 45.0% | |
| TCTCACCCTTAAGACTTGAG+GGG | + | chr3.1:4477112-4477131 | None:intergenic | 45.0% | |
| TTCTCGGGCAACATTTGGAT+GGG | - | chr3.1:4479332-4479351 | MS.gene84374:intron | 45.0% | |
| ! | AACCCACCTAAGCCTTTTGT+TGG | - | chr3.1:4477338-4477357 | MS.gene84374:intron | 45.0% |
| ! | ACAAAAGGCTTAGGTGGGTT+TGG | + | chr3.1:4477338-4477357 | None:intergenic | 45.0% |
| ! | ACCCACCTAAGCCTTTTGTT+GGG | - | chr3.1:4477339-4477358 | MS.gene84374:intron | 45.0% |
| ! | CTTAGGTGGGTTTGGATCAT+AGG | + | chr3.1:4477330-4477349 | None:intergenic | 45.0% |
| ! | CTTTTTGTAGGGGAATGGAC+GGG | - | chr3.1:4479240-4479259 | MS.gene84374:CDS | 45.0% |
| ! | GAACATAGTGGGACAAGAGA+TGG | - | chr3.1:4478306-4478325 | MS.gene84374:intron | 45.0% |
| ! | TGAATCACGGTTGGCTACAA+TGG | + | chr3.1:4475806-4475825 | None:intergenic | 45.0% |
| !! | GAAAGAGCATCAGATCTTGC+TGG | - | chr3.1:4479057-4479076 | MS.gene84374:intron | 45.0% |
| !! | GAATCTAGGAAACTGGCTTG+TGG | - | chr3.1:4475538-4475557 | MS.gene84374:CDS | 45.0% |
| !! | AAATAGAATAATATATTAAA+TGG | + | chr3.1:4478641-4478660 | None:intergenic | 5.0% |
| !! | TATATTTATAAAAGATATTT+AGG | - | chr3.1:4475887-4475906 | MS.gene84374:CDS | 5.0% |
| !!! | AATATCTTTTATAAATATAA+CGG | + | chr3.1:4475886-4475905 | None:intergenic | 5.0% |
| !!! | TTTTTAAAATAGAAATTAAT+TGG | + | chr3.1:4477688-4477707 | None:intergenic | 5.0% |
| AAACTTCGCCCAAGCGCAAT+TGG | - | chr3.1:4479302-4479321 | MS.gene84374:intron | 50.0% | |
| AAGACTTGAGGGGCTCTATC+TGG | + | chr3.1:4477102-4477121 | None:intergenic | 50.0% | |
| ACCAGAAGGTGAATCACGGT+TGG | + | chr3.1:4475815-4475834 | None:intergenic | 50.0% | |
| ACCGTGATTCACCTTCTGGT+TGG | - | chr3.1:4475815-4475834 | MS.gene84374:intron | 50.0% | |
| CCCAACCAGAAGGTGAATCA+CGG | + | chr3.1:4475819-4475838 | None:intergenic | 50.0% | |
| CCCCAACAAAAGGCTTAGGT+GGG | + | chr3.1:4477343-4477362 | None:intergenic | 50.0% | |
| CTGTCAGGATACCTGTTGGA+TGG | - | chr3.1:4477297-4477316 | MS.gene84374:intron | 50.0% | |
| GAGACATATTCTCGCGGCAA+TGG | + | chr3.1:4476509-4476528 | None:intergenic | 50.0% | |
| GAGCTGATGAATGAGCCACA+AGG | - | chr3.1:4478802-4478821 | MS.gene84374:CDS | 50.0% | |
| GATGCTGTCAGGATACCTGT+TGG | - | chr3.1:4477293-4477312 | MS.gene84374:intron | 50.0% | |
| TAGGCTATCCACCATCCAAC+AGG | + | chr3.1:4477311-4477330 | None:intergenic | 50.0% | |
| TCAATCACAGCGACTGTCTG+GGG | + | chr3.1:4478360-4478379 | None:intergenic | 50.0% | |
| TCAGGATACCTGTTGGATGG+TGG | - | chr3.1:4477300-4477319 | MS.gene84374:intron | 50.0% | |
| ! | ATTGCGCTTGGGCGAAGTTT+TGG | + | chr3.1:4479302-4479321 | None:intergenic | 50.0% |
| ! | CCACCTAAGCCTTTTGTTGG+GGG | - | chr3.1:4477341-4477360 | MS.gene84374:intron | 50.0% |
| ! | CCCACCTAAGCCTTTTGTTG+GGG | - | chr3.1:4477340-4477359 | MS.gene84374:intron | 50.0% |
| ! | CCGTGATTCACCTTCTGGTT+GGG | - | chr3.1:4475816-4475835 | MS.gene84374:intron | 50.0% |
| CCCCCAACAAAAGGCTTAGG+TGG | + | chr3.1:4477344-4477363 | None:intergenic | 55.0% | |
| CTTTGTGCTGAAGATGGGGG+AGG | - | chr3.1:4475775-4475794 | MS.gene84374:intron | 55.0% | |
| GCCAAAGCTCCCCCAACAAA+AGG | + | chr3.1:4477353-4477372 | None:intergenic | 55.0% | |
| GCCAACCGTGATTCACCTTC+TGG | - | chr3.1:4475811-4475830 | MS.gene84374:intron | 55.0% | |
| GCTCCCCCAACAAAAGGCTT+AGG | + | chr3.1:4477347-4477366 | None:intergenic | 55.0% | |
| ! | GCCTTTTGTTGGGGGAGCTT+TGG | - | chr3.1:4477349-4477368 | MS.gene84374:intron | 55.0% |
| !! | AGGAAACTGGCTTGTGGCTG+AGG | - | chr3.1:4475544-4475563 | MS.gene84374:CDS | 55.0% |
| !! | GAAACTGGCTTGTGGCTGAG+GGG | - | chr3.1:4475546-4475565 | MS.gene84374:CDS | 55.0% |
| !! | GGAAACTGGCTTGTGGCTGA+GGG | - | chr3.1:4475545-4475564 | MS.gene84374:CDS | 55.0% |
| TAGGGGAATGGACGGGTGAG+TGG | - | chr3.1:4479247-4479266 | MS.gene84374:CDS | 60.0% | |
| !! | ACTGGCTTGTGGCTGAGGGG+TGG | - | chr3.1:4475549-4475568 | MS.gene84374:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 4475512 | 4479485 | 4475512 | ID=MS.gene84374 |
| chr3.1 | mRNA | 4475512 | 4479485 | 4475512 | ID=MS.gene84374.t1;Parent=MS.gene84374 |
| chr3.1 | exon | 4479381 | 4479485 | 4479381 | ID=MS.gene84374.t1.exon1;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4479381 | 4479485 | 4479381 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4479148 | 4479267 | 4479148 | ID=MS.gene84374.t1.exon2;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4479148 | 4479267 | 4479148 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4478732 | 4478929 | 4478732 | ID=MS.gene84374.t1.exon3;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4478732 | 4478929 | 4478732 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4477872 | 4478027 | 4477872 | ID=MS.gene84374.t1.exon4;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4477872 | 4478027 | 4477872 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4477595 | 4477764 | 4477595 | ID=MS.gene84374.t1.exon5;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4477595 | 4477764 | 4477595 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4476603 | 4476752 | 4476603 | ID=MS.gene84374.t1.exon6;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4476603 | 4476752 | 4476603 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4475886 | 4476226 | 4475886 | ID=MS.gene84374.t1.exon7;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4475886 | 4476226 | 4475886 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| chr3.1 | exon | 4475512 | 4475747 | 4475512 | ID=MS.gene84374.t1.exon8;Parent=MS.gene84374.t1 |
| chr3.1 | CDS | 4475512 | 4475747 | 4475512 | ID=cds.MS.gene84374.t1;Parent=MS.gene84374.t1 |
| Gene Sequence |
| Protein sequence |
