Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91973.t1 | AAB41556.1 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 3.40E-176 | 627.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91973.t1 | P26690 | 84.8 | 310 | 47 | 0 | 3 | 312 | 4 | 313 | 1.1e-154 | 547.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91973.t1 | Q40310 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 2.4e-176 | 627.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049222 | MS.gene91973 | -0.811535 | 6.67E-51 | -1.69E-46 |
MS.gene049232 | MS.gene91973 | -0.834665 | 2.63E-56 | -1.69E-46 |
MS.gene049320 | MS.gene91973 | -0.811944 | 5.43E-51 | -1.69E-46 |
MS.gene049483 | MS.gene91973 | 0.808595 | 2.87E-50 | -1.69E-46 |
MS.gene049611 | MS.gene91973 | 0.812042 | 5.17E-51 | -1.69E-46 |
MS.gene049634 | MS.gene91973 | 0.802649 | 5.08E-49 | -1.69E-46 |
MS.gene050095 | MS.gene91973 | 0.805237 | 1.47E-49 | -1.69E-46 |
MS.gene05010 | MS.gene91973 | -0.809986 | 1.44E-50 | -1.69E-46 |
MS.gene050129 | MS.gene91973 | 0.800159 | 1.64E-48 | -1.69E-46 |
MS.gene050216 | MS.gene91973 | -0.836144 | 1.11E-56 | -1.69E-46 |
MS.gene050363 | MS.gene91973 | 0.813918 | 2.01E-51 | -1.69E-46 |
MS.gene050380 | MS.gene91973 | 0.871913 | 4.76E-67 | -1.69E-46 |
MS.gene050381 | MS.gene91973 | 0.914561 | 1.66E-84 | -1.69E-46 |
MS.gene050496 | MS.gene91973 | -0.804989 | 1.66E-49 | -1.69E-46 |
MS.gene050502 | MS.gene91973 | -0.821852 | 3.24E-53 | -1.69E-46 |
MS.gene050504 | MS.gene91973 | -0.84031 | 9.39E-58 | -1.69E-46 |
MS.gene050577 | MS.gene91973 | -0.801118 | 1.05E-48 | -1.69E-46 |
MS.gene050612 | MS.gene91973 | -0.815456 | 9.16E-52 | -1.69E-46 |
MS.gene050662 | MS.gene91973 | -0.804078 | 2.57E-49 | -1.69E-46 |
MS.gene050868 | MS.gene91973 | -0.84066 | 7.60E-58 | -1.69E-46 |
MS.gene050871 | MS.gene91973 | -0.844355 | 7.96E-59 | -1.69E-46 |
MS.gene050883 | MS.gene91973 | 0.894023 | 3.64E-75 | -1.69E-46 |
MS.gene050986 | MS.gene91973 | -0.805511 | 1.29E-49 | -1.69E-46 |
MS.gene051044 | MS.gene91973 | 0.806321 | 8.71E-50 | -1.69E-46 |
MS.gene05104 | MS.gene91973 | 0.826973 | 2.02E-54 | -1.69E-46 |
MS.gene051127 | MS.gene91973 | 0.874272 | 7.69E-68 | -1.69E-46 |
MS.gene051268 | MS.gene91973 | -0.804651 | 1.95E-49 | -1.69E-46 |
MS.gene05141 | MS.gene91973 | 0.847268 | 1.29E-59 | -1.69E-46 |
MS.gene051509 | MS.gene91973 | -0.834426 | 3.02E-56 | -1.69E-46 |
MS.gene051560 | MS.gene91973 | -0.810116 | 1.35E-50 | -1.69E-46 |
MS.gene051632 | MS.gene91973 | 0.805027 | 1.63E-49 | -1.69E-46 |
MS.gene051946 | MS.gene91973 | 0.859923 | 2.96E-63 | -1.69E-46 |
MS.gene052164 | MS.gene91973 | -0.850256 | 1.91E-60 | -1.69E-46 |
MS.gene052482 | MS.gene91973 | -0.815838 | 7.53E-52 | -1.69E-46 |
MS.gene052486 | MS.gene91973 | -0.817062 | 4.01E-52 | -1.69E-46 |
MS.gene052966 | MS.gene91973 | -0.817832 | 2.69E-52 | -1.69E-46 |
MS.gene053018 | MS.gene91973 | -0.810908 | 9.12E-51 | -1.69E-46 |
MS.gene053069 | MS.gene91973 | 0.807513 | 4.87E-50 | -1.69E-46 |
MS.gene053203 | MS.gene91973 | -0.83347 | 5.23E-56 | -1.69E-46 |
MS.gene053403 | MS.gene91973 | 0.802392 | 5.73E-49 | -1.69E-46 |
MS.gene053406 | MS.gene91973 | 0.803521 | 3.35E-49 | -1.69E-46 |
MS.gene053420 | MS.gene91973 | 0.848716 | 5.13E-60 | -1.69E-46 |
MS.gene053436 | MS.gene91973 | -0.833016 | 6.79E-56 | -1.69E-46 |
MS.gene053488 | MS.gene91973 | 0.803447 | 3.47E-49 | -1.69E-46 |
MS.gene053549 | MS.gene91973 | 0.840634 | 7.73E-58 | -1.69E-46 |
MS.gene053561 | MS.gene91973 | 0.816376 | 5.71E-52 | -1.69E-46 |
MS.gene053574 | MS.gene91973 | -0.819615 | 1.06E-52 | -1.69E-46 |
MS.gene053626 | MS.gene91973 | -0.837354 | 5.46E-57 | -1.69E-46 |
MS.gene053826 | MS.gene91973 | 0.841715 | 4.02E-58 | -1.69E-46 |
MS.gene054003 | MS.gene91973 | -0.827906 | 1.21E-54 | -1.69E-46 |
MS.gene054054 | MS.gene91973 | 0.813723 | 2.22E-51 | -1.69E-46 |
MS.gene054595 | MS.gene91973 | -0.855137 | 7.72E-62 | -1.69E-46 |
MS.gene054706 | MS.gene91973 | 0.824151 | 9.43E-54 | -1.69E-46 |
MS.gene054707 | MS.gene91973 | 0.803627 | 3.19E-49 | -1.69E-46 |
MS.gene054708 | MS.gene91973 | 0.861622 | 9.02E-64 | -1.69E-46 |
MS.gene054954 | MS.gene91973 | -0.803321 | 3.69E-49 | -1.69E-46 |
MS.gene055124 | MS.gene91973 | 0.88563 | 6.89E-72 | -1.69E-46 |
MS.gene055139 | MS.gene91973 | 0.847697 | 9.82E-60 | -1.69E-46 |
MS.gene055154 | MS.gene91973 | 0.86908 | 4.05E-66 | -1.69E-46 |
MS.gene055202 | MS.gene91973 | 0.831231 | 1.88E-55 | -1.69E-46 |
MS.gene055362 | MS.gene91973 | -0.81367 | 2.28E-51 | -1.69E-46 |
MS.gene055401 | MS.gene91973 | 0.829533 | 4.88E-55 | -1.69E-46 |
MS.gene055502 | MS.gene91973 | -0.818183 | 2.24E-52 | -1.69E-46 |
MS.gene055577 | MS.gene91973 | -0.821023 | 5.03E-53 | -1.69E-46 |
MS.gene055629 | MS.gene91973 | -0.804729 | 1.88E-49 | -1.69E-46 |
MS.gene055750 | MS.gene91973 | -0.805116 | 1.56E-49 | -1.69E-46 |
MS.gene05589 | MS.gene91973 | -0.813856 | 2.07E-51 | -1.69E-46 |
MS.gene056040 | MS.gene91973 | -0.810809 | 9.58E-51 | -1.69E-46 |
MS.gene056076 | MS.gene91973 | 0.812852 | 3.44E-51 | -1.69E-46 |
MS.gene056166 | MS.gene91973 | -0.824932 | 6.17E-54 | -1.69E-46 |
MS.gene056298 | MS.gene91973 | 0.816779 | 4.64E-52 | -1.69E-46 |
MS.gene056310 | MS.gene91973 | 0.915561 | 5.09E-85 | -1.69E-46 |
MS.gene056311 | MS.gene91973 | 0.886014 | 4.94E-72 | -1.69E-46 |
MS.gene056313 | MS.gene91973 | 0.929762 | 4.36E-93 | -1.69E-46 |
MS.gene056408 | MS.gene91973 | 0.839188 | 1.84E-57 | -1.69E-46 |
MS.gene056422 | MS.gene91973 | -0.804916 | 1.72E-49 | -1.69E-46 |
MS.gene056504 | MS.gene91973 | -0.841582 | 4.35E-58 | -1.69E-46 |
MS.gene056510 | MS.gene91973 | -0.805666 | 1.20E-49 | -1.69E-46 |
MS.gene056647 | MS.gene91973 | 0.809957 | 1.46E-50 | -1.69E-46 |
MS.gene056878 | MS.gene91973 | -0.819187 | 1.32E-52 | -1.69E-46 |
MS.gene057014 | MS.gene91973 | 0.851356 | 9.36E-61 | -1.69E-46 |
MS.gene057086 | MS.gene91973 | -0.829288 | 5.60E-55 | -1.69E-46 |
MS.gene057291 | MS.gene91973 | 0.812871 | 3.41E-51 | -1.69E-46 |
MS.gene057293 | MS.gene91973 | 0.801832 | 7.47E-49 | -1.69E-46 |
MS.gene057506 | MS.gene91973 | 0.802324 | 5.92E-49 | -1.69E-46 |
MS.gene057770 | MS.gene91973 | 0.812562 | 3.98E-51 | -1.69E-46 |
MS.gene05787 | MS.gene91973 | -0.80076 | 1.24E-48 | -1.69E-46 |
MS.gene058041 | MS.gene91973 | -0.806428 | 8.27E-50 | -1.69E-46 |
MS.gene058068 | MS.gene91973 | 0.803634 | 3.17E-49 | -1.69E-46 |
MS.gene058093 | MS.gene91973 | 0.830299 | 3.18E-55 | -1.69E-46 |
MS.gene058099 | MS.gene91973 | 0.852491 | 4.46E-61 | -1.69E-46 |
MS.gene058108 | MS.gene91973 | 0.864853 | 9.02E-65 | -1.69E-46 |
MS.gene058109 | MS.gene91973 | 0.887491 | 1.36E-72 | -1.69E-46 |
MS.gene058111 | MS.gene91973 | 0.833568 | 4.95E-56 | -1.69E-46 |
MS.gene058117 | MS.gene91973 | 0.803393 | 3.56E-49 | -1.69E-46 |
MS.gene058157 | MS.gene91973 | -0.823852 | 1.11E-53 | -1.69E-46 |
MS.gene058170 | MS.gene91973 | 0.857612 | 1.45E-62 | -1.69E-46 |
MS.gene058171 | MS.gene91973 | 0.894949 | 1.52E-75 | -1.69E-46 |
MS.gene058172 | MS.gene91973 | 0.826155 | 3.17E-54 | -1.69E-46 |
MS.gene058173 | MS.gene91973 | 0.887945 | 9.13E-73 | -1.69E-46 |
MS.gene058174 | MS.gene91973 | 0.856081 | 4.09E-62 | -1.69E-46 |
MS.gene058175 | MS.gene91973 | 0.891264 | 4.66E-74 | -1.69E-46 |
MS.gene058179 | MS.gene91973 | 0.847799 | 9.20E-60 | -1.69E-46 |
MS.gene058180 | MS.gene91973 | 0.853546 | 2.22E-61 | -1.69E-46 |
MS.gene058268 | MS.gene91973 | 0.817245 | 3.64E-52 | -1.69E-46 |
MS.gene058269 | MS.gene91973 | 0.817022 | 4.09E-52 | -1.69E-46 |
MS.gene05837 | MS.gene91973 | -0.827661 | 1.38E-54 | -1.69E-46 |
MS.gene058420 | MS.gene91973 | -0.832511 | 9.07E-56 | -1.69E-46 |
MS.gene058493 | MS.gene91973 | 0.81587 | 7.41E-52 | -1.69E-46 |
MS.gene058494 | MS.gene91973 | 0.801515 | 8.68E-49 | -1.69E-46 |
MS.gene058629 | MS.gene91973 | 0.803779 | 2.96E-49 | -1.69E-46 |
MS.gene058630 | MS.gene91973 | 0.80407 | 2.58E-49 | -1.69E-46 |
MS.gene058840 | MS.gene91973 | 0.82085 | 5.52E-53 | -1.69E-46 |
MS.gene059022 | MS.gene91973 | -0.824099 | 9.70E-54 | -1.69E-46 |
MS.gene059037 | MS.gene91973 | 0.867718 | 1.11E-65 | -1.69E-46 |
MS.gene059038 | MS.gene91973 | 0.813243 | 2.83E-51 | -1.69E-46 |
MS.gene059044 | MS.gene91973 | 0.810003 | 1.43E-50 | -1.69E-46 |
MS.gene059045 | MS.gene91973 | 0.878085 | 3.73E-69 | -1.69E-46 |
MS.gene059223 | MS.gene91973 | 0.850041 | 2.19E-60 | -1.69E-46 |
MS.gene059367 | MS.gene91973 | -0.867236 | 1.59E-65 | -1.69E-46 |
MS.gene059368 | MS.gene91973 | -0.833972 | 3.92E-56 | -1.69E-46 |
MS.gene059517 | MS.gene91973 | -0.828878 | 7.04E-55 | -1.69E-46 |
MS.gene059680 | MS.gene91973 | -0.810401 | 1.17E-50 | -1.69E-46 |
MS.gene059690 | MS.gene91973 | 0.821881 | 3.19E-53 | -1.69E-46 |
MS.gene059691 | MS.gene91973 | 0.809315 | 2.01E-50 | -1.69E-46 |
MS.gene059694 | MS.gene91973 | 0.834637 | 2.67E-56 | -1.69E-46 |
MS.gene059697 | MS.gene91973 | 0.845431 | 4.08E-59 | -1.69E-46 |
MS.gene059718 | MS.gene91973 | -0.808888 | 2.48E-50 | -1.69E-46 |
MS.gene059865 | MS.gene91973 | -0.838851 | 2.25E-57 | -1.69E-46 |
MS.gene059916 | MS.gene91973 | 0.810124 | 1.35E-50 | -1.69E-46 |
MS.gene059943 | MS.gene91973 | 0.815894 | 7.32E-52 | -1.69E-46 |
MS.gene059944 | MS.gene91973 | 0.845229 | 4.63E-59 | -1.69E-46 |
MS.gene060187 | MS.gene91973 | 0.814353 | 1.61E-51 | -1.69E-46 |
MS.gene060482 | MS.gene91973 | -0.870962 | 9.81E-67 | -1.69E-46 |
MS.gene060593 | MS.gene91973 | 0.811144 | 8.11E-51 | -1.69E-46 |
MS.gene060595 | MS.gene91973 | 0.825345 | 4.93E-54 | -1.69E-46 |
MS.gene060778 | MS.gene91973 | -0.846374 | 2.26E-59 | -1.69E-46 |
MS.gene06077 | MS.gene91973 | -0.847284 | 1.27E-59 | -1.69E-46 |
MS.gene060808 | MS.gene91973 | 0.81532 | 9.82E-52 | -1.69E-46 |
MS.gene060982 | MS.gene91973 | -0.803165 | 3.97E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene91973 | MS.gene42873 | PPI |
MS.gene91973 | MS.gene87111 | PPI |
MS.gene91973 | MS.gene62620 | PPI |
MS.gene91973 | MS.gene97980 | PPI |
MS.gene91973 | MS.gene97981 | PPI |
MS.gene91973 | MS.gene056487 | PPI |
MS.gene91973 | MS.gene062932 | PPI |
MS.gene91973 | MS.gene040151 | PPI |
MS.gene91973 | MS.gene50700 | PPI |
MS.gene91973 | MS.gene008793 | PPI |
MS.gene91973 | MS.gene024362 | PPI |
MS.gene91973 | MS.gene23359 | PPI |
MS.gene040151 | MS.gene91973 | PPI |
MS.gene91973 | MS.gene53169 | PPI |
MS.gene91973 | MS.gene93058 | PPI |
MS.gene91973 | MS.gene72560 | PPI |
MS.gene91973 | MS.gene91446 | PPI |
MS.gene91973 | MS.gene008794 | PPI |
MS.gene91973 | MS.gene95889 | PPI |
MS.gene91973 | MS.gene54933 | PPI |
MS.gene91973 | MS.gene003638 | PPI |
MS.gene91973 | MS.gene98697 | PPI |
MS.gene91973 | MS.gene056488 | PPI |
MS.gene91973 | MS.gene93059 | PPI |
MS.gene91973 | MS.gene93783 | PPI |
MS.gene91973 | MS.gene55382 | PPI |
MS.gene91973 | MS.gene99693 | PPI |
MS.gene91973 | MS.gene42146 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91973.t1 | MTR_5g097900 | 98.397 | 312 | 5 | 0 | 1 | 312 | 1 | 312 | 0.0 | 637 |
MS.gene91973.t1 | MTR_5g097910 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 636 |
MS.gene91973.t1 | MTR_5g097940 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 636 |
MS.gene91973.t1 | MTR_3g083130 | 68.182 | 308 | 97 | 1 | 6 | 312 | 7 | 314 | 7.27e-162 | 453 |
MS.gene91973.t1 | MTR_0374s0050 | 62.951 | 305 | 110 | 3 | 1 | 302 | 1 | 305 | 1.55e-137 | 392 |
MS.gene91973.t1 | MTR_4g072320 | 52.508 | 299 | 132 | 4 | 1 | 297 | 1 | 291 | 3.76e-101 | 300 |
MS.gene91973.t1 | MTR_4g072350 | 51.155 | 303 | 136 | 5 | 20 | 311 | 17 | 318 | 3.72e-99 | 295 |
MS.gene91973.t1 | MTR_4g072360 | 50.000 | 300 | 144 | 4 | 1 | 297 | 1 | 297 | 8.33e-99 | 294 |
MS.gene91973.t1 | MTR_6g073110 | 50.165 | 303 | 145 | 4 | 1 | 300 | 1 | 300 | 1.04e-97 | 291 |
MS.gene91973.t1 | MTR_8g070095 | 42.958 | 284 | 159 | 2 | 19 | 300 | 15 | 297 | 3.07e-75 | 233 |
MS.gene91973.t1 | MTR_4g036845 | 41.754 | 285 | 161 | 4 | 18 | 300 | 12 | 293 | 1.76e-73 | 229 |
MS.gene91973.t1 | MTR_8g070115 | 43.403 | 288 | 152 | 4 | 19 | 302 | 15 | 295 | 1.38e-70 | 221 |
MS.gene91973.t1 | MTR_7g063580 | 43.015 | 272 | 143 | 3 | 49 | 311 | 83 | 351 | 3.80e-70 | 221 |
MS.gene91973.t1 | MTR_4g021350 | 43.098 | 297 | 152 | 6 | 19 | 310 | 15 | 299 | 3.96e-66 | 210 |
MS.gene91973.t1 | MTR_4g021350 | 43.416 | 281 | 144 | 5 | 19 | 294 | 15 | 285 | 6.12e-64 | 204 |
MS.gene91973.t1 | MTR_4g021410 | 41.639 | 305 | 150 | 6 | 19 | 312 | 16 | 303 | 1.29e-63 | 203 |
MS.gene91973.t1 | MTR_4g021410 | 42.491 | 273 | 137 | 4 | 48 | 312 | 6 | 266 | 3.34e-60 | 193 |
MS.gene91973.t1 | MTR_4g021450 | 42.199 | 282 | 149 | 3 | 19 | 300 | 16 | 283 | 4.19e-60 | 194 |
MS.gene91973.t1 | MTR_4g072060 | 39.414 | 307 | 171 | 6 | 15 | 310 | 6 | 308 | 4.98e-59 | 192 |
MS.gene91973.t1 | MTR_7g070500 | 38.214 | 280 | 165 | 5 | 20 | 298 | 23 | 295 | 4.98e-59 | 192 |
MS.gene91973.t1 | MTR_7g070500 | 38.686 | 274 | 160 | 5 | 20 | 292 | 23 | 289 | 1.48e-58 | 190 |
MS.gene91973.t1 | MTR_4g021410 | 41.423 | 239 | 120 | 4 | 82 | 312 | 1 | 227 | 2.32e-46 | 156 |
MS.gene91973.t1 | MTR_4g021450 | 42.466 | 219 | 114 | 2 | 82 | 300 | 1 | 207 | 1.05e-43 | 149 |
MS.gene91973.t1 | MTR_4g021450 | 42.405 | 158 | 88 | 1 | 143 | 300 | 10 | 164 | 1.25e-37 | 132 |
MS.gene91973.t1 | MTR_6g072650 | 44.218 | 147 | 46 | 5 | 176 | 311 | 13 | 134 | 5.45e-27 | 103 |
MS.gene91973.t1 | MTR_6g072710 | 46.018 | 113 | 56 | 2 | 191 | 300 | 1 | 111 | 1.41e-25 | 99.0 |
MS.gene91973.t1 | MTR_3g449790 | 26.625 | 323 | 159 | 12 | 15 | 285 | 42 | 338 | 3.21e-18 | 84.3 |
MS.gene91973.t1 | MTR_3g449790 | 26.140 | 329 | 159 | 13 | 15 | 285 | 42 | 344 | 5.31e-17 | 80.9 |
MS.gene91973.t1 | MTR_7g114990 | 25.347 | 288 | 151 | 11 | 41 | 289 | 52 | 314 | 6.23e-13 | 68.9 |
MS.gene91973.t1 | MTR_7g021850 | 25.087 | 287 | 161 | 9 | 41 | 292 | 43 | 310 | 4.30e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91973.t1 | AT1G59960 | 53.571 | 308 | 132 | 6 | 1 | 300 | 1 | 305 | 6.85e-112 | 327 |
MS.gene91973.t1 | AT1G59950 | 55.903 | 288 | 117 | 5 | 20 | 300 | 15 | 299 | 1.20e-104 | 308 |
MS.gene91973.t1 | AT2G37770 | 44.755 | 286 | 147 | 4 | 19 | 300 | 15 | 293 | 1.13e-77 | 239 |
MS.gene91973.t1 | AT2G37790 | 43.357 | 286 | 151 | 4 | 19 | 300 | 15 | 293 | 2.10e-76 | 236 |
MS.gene91973.t1 | AT5G62420 | 43.662 | 284 | 154 | 4 | 20 | 300 | 14 | 294 | 1.09e-73 | 229 |
MS.gene91973.t1 | AT5G01670 | 42.254 | 284 | 155 | 6 | 19 | 300 | 23 | 299 | 1.10e-72 | 227 |
MS.gene91973.t1 | AT2G37760 | 43.662 | 284 | 147 | 4 | 19 | 299 | 15 | 288 | 4.11e-72 | 224 |
MS.gene91973.t1 | AT2G37760 | 43.662 | 284 | 147 | 4 | 19 | 299 | 15 | 288 | 4.11e-72 | 224 |
MS.gene91973.t1 | AT2G37760 | 44.128 | 281 | 144 | 4 | 19 | 296 | 15 | 285 | 2.94e-71 | 223 |
MS.gene91973.t1 | AT2G37760 | 43.617 | 282 | 146 | 4 | 19 | 297 | 15 | 286 | 2.34e-70 | 221 |
MS.gene91973.t1 | AT2G37760 | 43.617 | 282 | 146 | 4 | 19 | 297 | 15 | 286 | 2.34e-70 | 221 |
MS.gene91973.t1 | AT3G53880 | 42.049 | 283 | 159 | 3 | 19 | 300 | 15 | 293 | 9.55e-70 | 219 |
MS.gene91973.t1 | AT3G53880 | 42.143 | 280 | 151 | 4 | 19 | 294 | 15 | 287 | 2.39e-67 | 213 |
MS.gene91973.t1 | AT2G21260 | 39.384 | 292 | 162 | 6 | 15 | 295 | 6 | 293 | 4.49e-67 | 212 |
MS.gene91973.t1 | AT5G01670 | 38.585 | 311 | 155 | 7 | 19 | 300 | 23 | 326 | 1.17e-66 | 213 |
MS.gene91973.t1 | AT2G21250 | 38.111 | 307 | 175 | 6 | 15 | 310 | 6 | 308 | 8.20e-66 | 209 |
MS.gene91973.t1 | AT2G37760 | 43.515 | 239 | 128 | 3 | 62 | 297 | 6 | 240 | 7.82e-58 | 187 |
MS.gene91973.t1 | AT2G37760 | 43.515 | 239 | 128 | 3 | 62 | 297 | 6 | 240 | 7.82e-58 | 187 |
MS.gene91973.t1 | AT2G37770 | 48.223 | 197 | 92 | 3 | 19 | 212 | 15 | 204 | 6.34e-55 | 180 |
MS.gene91973.t1 | AT2G21250 | 42.381 | 210 | 110 | 5 | 15 | 217 | 6 | 211 | 9.66e-49 | 163 |
MS.gene91973.t1 | AT2G21260 | 35.000 | 220 | 130 | 5 | 87 | 295 | 8 | 225 | 1.62e-40 | 142 |
MS.gene91973.t1 | AT1G06690 | 27.336 | 289 | 154 | 9 | 35 | 285 | 85 | 355 | 5.50e-20 | 89.7 |
MS.gene91973.t1 | AT5G53580 | 24.211 | 285 | 161 | 9 | 44 | 290 | 80 | 347 | 3.33e-15 | 75.9 |
MS.gene91973.t1 | AT1G60680 | 25.982 | 331 | 178 | 15 | 15 | 300 | 14 | 322 | 5.81e-14 | 72.0 |
MS.gene91973.t1 | AT1G60750 | 25.532 | 282 | 160 | 12 | 44 | 300 | 50 | 306 | 4.51e-11 | 63.2 |
Find 67 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCAAAGATACACAAATTT+TGG | 0.147232 | 5.2:-82463618 | None:intergenic |
ATTGGAAATGAAAACTTTCC+AGG | 0.287256 | 5.2:-82463091 | None:intergenic |
TGGACTTGTACTTGATTCAT+TGG | 0.300645 | 5.2:+82463053 | MS.gene91973:CDS |
TGCTTGCACCTTTCCTCAAC+GGG | 0.309651 | 5.2:-82463450 | None:intergenic |
TCTTTCTTACATGTGAAATC+AGG | 0.320198 | 5.2:-82462566 | None:intergenic |
GTGTCTATAACCTTGTTTGA+TGG | 0.333209 | 5.2:-82462612 | None:intergenic |
AAAATTTGTGTATCTTTGAT+TGG | 0.361005 | 5.2:+82463620 | MS.gene91973:CDS |
CATTTGATGTGAAAGGTGTT+TGG | 0.375654 | 5.2:+82463134 | MS.gene91973:CDS |
CTTGGACTCACTAAAGCTAT+TGG | 0.375778 | 5.2:+82463181 | MS.gene91973:CDS |
CAAACACCTTTCACATCAAA+TGG | 0.378027 | 5.2:-82463133 | None:intergenic |
AAGAGATCTGCCACATCAAT+TGG | 0.378807 | 5.2:-82463109 | None:intergenic |
AGTCCGGGCTTGGTTGGTCC+AGG | 0.391423 | 5.2:-82463700 | None:intergenic |
CAGAGGACCTAATGAGGTTA+TGG | 0.398751 | 5.2:+82463471 | MS.gene91973:CDS |
TCATTCTCCATAACCTCATT+AGG | 0.399791 | 5.2:-82463478 | None:intergenic |
TCTCTCCTTATCGTAGCTCT+TGG | 0.404831 | 5.2:-82463590 | None:intergenic |
ATCATAGAGGTCATTGAGTC+CGG | 0.411816 | 5.2:-82463716 | None:intergenic |
ATTTGATGTGAAAGGTGTTT+GGG | 0.418218 | 5.2:+82463135 | MS.gene91973:CDS |
CTCTCCTTATCGTAGCTCTT+GGG | 0.422362 | 5.2:-82463589 | None:intergenic |
TTGAAAGAGGCAATTGAACT+TGG | 0.422526 | 5.2:+82462683 | MS.gene91973:CDS |
TTTGATACTGCTGCTGCCTA+TGG | 0.438326 | 5.2:+82462635 | MS.gene91973:CDS |
GAGGTCATTGAGTCCGGGCT+TGG | 0.446240 | 5.2:-82463710 | None:intergenic |
AAGCAAAATCGTTTGATCCC+TGG | 0.455139 | 5.2:+82463682 | MS.gene91973:CDS |
TGTTCCCAAGAGCTACGATA+AGG | 0.457748 | 5.2:+82463585 | MS.gene91973:CDS |
AAAGTTTGGAAGTAACAAAA+AGG | 0.467615 | 5.2:-82462724 | None:intergenic |
GACTCTTCAACTAGACTACT+TGG | 0.469433 | 5.2:+82463033 | MS.gene91973:CDS |
ATCCCTGGACCAACCAAGCC+CGG | 0.482612 | 5.2:+82463697 | MS.gene91973:CDS |
AAGTTTCAAGCTTTCCTCCA+TGG | 0.483539 | 5.2:-82463161 | None:intergenic |
TATGGTTCAGAACAAGCTCT+TGG | 0.489964 | 5.2:+82462653 | MS.gene91973:CDS |
CTGCTTGCACCTTTCCTCAA+CGG | 0.498271 | 5.2:-82463451 | None:intergenic |
ATGGAGGAAAGCTTGAAACT+TGG | 0.498400 | 5.2:+82463163 | MS.gene91973:CDS |
TTGCACAAATATCTCTAAGA+TGG | 0.504708 | 5.2:+82463539 | MS.gene91973:CDS |
TCTTGGAGAGGCTTTGAAAG+AGG | 0.506147 | 5.2:+82462670 | MS.gene91973:CDS |
CTTTCTTACATGTGAAATCA+GGG | 0.510805 | 5.2:-82462565 | None:intergenic |
CTCTTACCATTTGATGTGAA+AGG | 0.516557 | 5.2:+82463127 | MS.gene91973:CDS |
GTGTTTGTAAGAACCTTTGT+TGG | 0.525023 | 5.2:-82462500 | None:intergenic |
AAGAGCTTGTTCTGAACCAT+AGG | 0.526693 | 5.2:-82462651 | None:intergenic |
GAAGATGCCTGTGGTTGGAA+TGG | 0.535658 | 5.2:+82462535 | MS.gene91973:CDS |
AAAGAGATTGCAGATGCTCA+TGG | 0.540234 | 5.2:+82463508 | MS.gene91973:CDS |
GTCCGGGCTTGGTTGGTCCA+GGG | 0.541777 | 5.2:-82463699 | None:intergenic |
TCATTGAGTCCGGGCTTGGT+TGG | 0.547327 | 5.2:-82463706 | None:intergenic |
TCTATATTTAGTCATCATAG+AGG | 0.553846 | 5.2:-82463729 | None:intergenic |
AAGATGCCTGTGGTTGGAAT+GGG | 0.555328 | 5.2:+82462536 | MS.gene91973:CDS |
CTTTGATTGGTCATTGACAA+AGG | 0.559604 | 5.2:+82463633 | MS.gene91973:CDS |
TCATAGAGGTCATTGAGTCC+GGG | 0.574712 | 5.2:-82463715 | None:intergenic |
GGACTTACTTGATTGACTGC+AGG | 0.575026 | 5.2:-82463262 | None:intergenic |
AGGTGGAGATGAACCTTGCA+TGG | 0.584406 | 5.2:+82463368 | MS.gene91973:intron |
CTAAGATGGTTATACGAACA+AGG | 0.585710 | 5.2:+82463553 | MS.gene91973:CDS |
GCTGATCCCATTCCAACCAC+AGG | 0.587516 | 5.2:-82462542 | None:intergenic |
ATCATTGAAGCCATCAAACA+AGG | 0.587661 | 5.2:+82462602 | MS.gene91973:CDS |
GAAAGGTGTTTGGGAATCCA+TGG | 0.587744 | 5.2:+82463144 | MS.gene91973:CDS |
TGCAAGCAGAGGACCTAATG+AGG | 0.592065 | 5.2:+82463465 | MS.gene91973:CDS |
TAGTGTTGAAATTCCAACAA+AGG | 0.595790 | 5.2:+82462487 | MS.gene91973:CDS |
CAATTGAAGATGCCTGTGGT+TGG | 0.621459 | 5.2:+82462530 | MS.gene91973:CDS |
TGGCCACTTAGTTCTCAACC+TGG | 0.621982 | 5.2:+82463073 | MS.gene91973:CDS |
AGAGCAGGAATAACAAGATG+AGG | 0.624425 | 5.2:-82462764 | None:intergenic |
TTTCCAGGTTGAGAACTAAG+TGG | 0.629025 | 5.2:-82463076 | None:intergenic |
CAGGAATAACAAGATGAGGA+TGG | 0.629084 | 5.2:-82462760 | None:intergenic |
TTTCCTCAACGGGGAAAATG+CGG | 0.632608 | 5.2:-82463440 | None:intergenic |
TTGAGGAAAGGTGCAAGCAG+AGG | 0.639249 | 5.2:+82463454 | MS.gene91973:CDS |
TTCAGAACAAGCTCTTGGAG+AGG | 0.639658 | 5.2:+82462658 | MS.gene91973:CDS |
AGGCATCTTCAATTGACTAG+AGG | 0.647055 | 5.2:-82462522 | None:intergenic |
TGATTGGTCATTGACAAAGG+AGG | 0.655967 | 5.2:+82463636 | MS.gene91973:CDS |
TTTCTTACATGTGAAATCAG+GGG | 0.661522 | 5.2:-82462564 | None:intergenic |
TAGTCAATTGAAGATGCCTG+TGG | 0.693349 | 5.2:+82462526 | MS.gene91973:CDS |
ATTGACTGCAGGAAGAACAG+TGG | 0.718468 | 5.2:-82463251 | None:intergenic |
AGGTGTTTGGGAATCCATGG+AGG | 0.719619 | 5.2:+82463147 | MS.gene91973:CDS |
GCTTGCACCTTTCCTCAACG+GGG | 0.723595 | 5.2:-82463449 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTTGTGTATCTTTGAT+TGG | + | chr5.2:82463620-82463639 | MS.gene91973:CDS | 20.0% |
!! | CAATGAACTCATATATTTAT+AGG | + | chr5.2:82463348-82463367 | MS.gene91973:intron | 20.0% |
!!! | AATCAAAGATACACAAATTT+TGG | - | chr5.2:82463621-82463640 | None:intergenic | 20.0% |
! | AAAGTTTGGAAGTAACAAAA+AGG | - | chr5.2:82462727-82462746 | None:intergenic | 25.0% |
! | CAAGAAGTTAATCTAAACTT+AGG | - | chr5.2:82463297-82463316 | None:intergenic | 25.0% |
! | GAGTATATTTAGATGACATT+TGG | + | chr5.2:82462832-82462851 | MS.gene91973:intron | 25.0% |
! | TCTAAACTTAGGTTTAATTG+AGG | - | chr5.2:82463286-82463305 | None:intergenic | 25.0% |
! | TGAACTCATATATTTATAGG+TGG | + | chr5.2:82463351-82463370 | MS.gene91973:intron | 25.0% |
!!! | GATTCATTTTTGTTCTTCAA+TGG | - | chr5.2:82462965-82462984 | None:intergenic | 25.0% |
!!! | TTTTGTTACTTCCAAACTTT+GGG | + | chr5.2:82462727-82462746 | MS.gene91973:CDS | 25.0% |
!!! | TTTTTGTTACTTCCAAACTT+TGG | + | chr5.2:82462726-82462745 | MS.gene91973:CDS | 25.0% |
ATTGGAAATGAAAACTTTCC+AGG | - | chr5.2:82463094-82463113 | None:intergenic | 30.0% | |
CTTTCTTACATGTGAAATCA+GGG | - | chr5.2:82462568-82462587 | None:intergenic | 30.0% | |
TCTTTCTTACATGTGAAATC+AGG | - | chr5.2:82462569-82462588 | None:intergenic | 30.0% | |
TTTCTTACATGTGAAATCAG+GGG | - | chr5.2:82462567-82462586 | None:intergenic | 30.0% | |
! | GTTTTCATTTCCAATTGATG+TGG | + | chr5.2:82463099-82463118 | MS.gene91973:CDS | 30.0% |
! | TAGTGTTGAAATTCCAACAA+AGG | + | chr5.2:82462487-82462506 | MS.gene91973:CDS | 30.0% |
! | TTGCACAAATATCTCTAAGA+TGG | + | chr5.2:82463539-82463558 | MS.gene91973:CDS | 30.0% |
!! | ATTTGATGTGAAAGGTGTTT+GGG | + | chr5.2:82463135-82463154 | MS.gene91973:CDS | 30.0% |
ATCATTGAAGCCATCAAACA+AGG | + | chr5.2:82462602-82462621 | MS.gene91973:CDS | 35.0% | |
CAAACACCTTTCACATCAAA+TGG | - | chr5.2:82463136-82463155 | None:intergenic | 35.0% | |
CTAAGATGGTTATACGAACA+AGG | + | chr5.2:82463553-82463572 | MS.gene91973:CDS | 35.0% | |
CTCTTACCATTTGATGTGAA+AGG | + | chr5.2:82463127-82463146 | MS.gene91973:CDS | 35.0% | |
GTGTTTGTAAGAACCTTTGT+TGG | - | chr5.2:82462503-82462522 | None:intergenic | 35.0% | |
TCATTCTCCATAACCTCATT+AGG | - | chr5.2:82463481-82463500 | None:intergenic | 35.0% | |
TGGACTTGTACTTGATTCAT+TGG | + | chr5.2:82463053-82463072 | MS.gene91973:CDS | 35.0% | |
TTGAAAGAGGCAATTGAACT+TGG | + | chr5.2:82462683-82462702 | MS.gene91973:CDS | 35.0% | |
! | CTTTGATTGGTCATTGACAA+AGG | + | chr5.2:82463633-82463652 | MS.gene91973:CDS | 35.0% |
! | GTGTCTATAACCTTGTTTGA+TGG | - | chr5.2:82462615-82462634 | None:intergenic | 35.0% |
!! | ATGATTTGTTGATTTCGTGC+AGG | + | chr5.2:82463011-82463030 | MS.gene91973:intron | 35.0% |
!! | CATTTGATGTGAAAGGTGTT+TGG | + | chr5.2:82463134-82463153 | MS.gene91973:CDS | 35.0% |
!! | TTGAGAGATTTTTGAAGAGC+AGG | - | chr5.2:82462782-82462801 | None:intergenic | 35.0% |
AAAGAGATTGCAGATGCTCA+TGG | + | chr5.2:82463508-82463527 | MS.gene91973:CDS | 40.0% | |
AAGAGATCTGCCACATCAAT+TGG | - | chr5.2:82463112-82463131 | None:intergenic | 40.0% | |
AAGCAAAATCGTTTGATCCC+TGG | + | chr5.2:82463682-82463701 | MS.gene91973:CDS | 40.0% | |
AAGTTTCAAGCTTTCCTCCA+TGG | - | chr5.2:82463164-82463183 | None:intergenic | 40.0% | |
AGAGCAGGAATAACAAGATG+AGG | - | chr5.2:82462767-82462786 | None:intergenic | 40.0% | |
AGGCATCTTCAATTGACTAG+AGG | - | chr5.2:82462525-82462544 | None:intergenic | 40.0% | |
ATCATAGAGGTCATTGAGTC+CGG | - | chr5.2:82463719-82463738 | None:intergenic | 40.0% | |
ATGGAGGAAAGCTTGAAACT+TGG | + | chr5.2:82463163-82463182 | MS.gene91973:CDS | 40.0% | |
CAGGAATAACAAGATGAGGA+TGG | - | chr5.2:82462763-82462782 | None:intergenic | 40.0% | |
CTTGGACTCACTAAAGCTAT+TGG | + | chr5.2:82463181-82463200 | MS.gene91973:CDS | 40.0% | |
GACTCTTCAACTAGACTACT+TGG | + | chr5.2:82463033-82463052 | MS.gene91973:CDS | 40.0% | |
TAGTCAATTGAAGATGCCTG+TGG | + | chr5.2:82462526-82462545 | MS.gene91973:CDS | 40.0% | |
TATGGTTCAGAACAAGCTCT+TGG | + | chr5.2:82462653-82462672 | MS.gene91973:CDS | 40.0% | |
! | AAGAGCTTGTTCTGAACCAT+AGG | - | chr5.2:82462654-82462673 | None:intergenic | 40.0% |
! | GTTTTCAGTGACCCAAAGTT+TGG | - | chr5.2:82462741-82462760 | None:intergenic | 40.0% |
! | TGATTGGTCATTGACAAAGG+AGG | + | chr5.2:82463636-82463655 | MS.gene91973:CDS | 40.0% |
! | TTTCCAGGTTGAGAACTAAG+TGG | - | chr5.2:82463079-82463098 | None:intergenic | 40.0% |
AAGATGCCTGTGGTTGGAAT+GGG | + | chr5.2:82462536-82462555 | MS.gene91973:CDS | 45.0% | |
ATTGACTGCAGGAAGAACAG+TGG | - | chr5.2:82463254-82463273 | None:intergenic | 45.0% | |
CAATTGAAGATGCCTGTGGT+TGG | + | chr5.2:82462530-82462549 | MS.gene91973:CDS | 45.0% | |
CAGAGGACCTAATGAGGTTA+TGG | + | chr5.2:82463471-82463490 | MS.gene91973:CDS | 45.0% | |
CTCTCCTTATCGTAGCTCTT+GGG | - | chr5.2:82463592-82463611 | None:intergenic | 45.0% | |
GGACTTACTTGATTGACTGC+AGG | - | chr5.2:82463265-82463284 | None:intergenic | 45.0% | |
TCATAGAGGTCATTGAGTCC+GGG | - | chr5.2:82463718-82463737 | None:intergenic | 45.0% | |
TCTCTCCTTATCGTAGCTCT+TGG | - | chr5.2:82463593-82463612 | None:intergenic | 45.0% | |
TGTTCCCAAGAGCTACGATA+AGG | + | chr5.2:82463585-82463604 | MS.gene91973:CDS | 45.0% | |
TTCAGAACAAGCTCTTGGAG+AGG | + | chr5.2:82462658-82462677 | MS.gene91973:CDS | 45.0% | |
TTTCCTCAACGGGGAAAATG+CGG | - | chr5.2:82463443-82463462 | None:intergenic | 45.0% | |
TTTGATACTGCTGCTGCCTA+TGG | + | chr5.2:82462635-82462654 | MS.gene91973:CDS | 45.0% | |
! | AGAGAGTTTTGCAACGCACA+CGG | + | chr5.2:82463406-82463425 | MS.gene91973:CDS | 45.0% |
! | GCTTCTTTTGTTGCCATGCA+AGG | - | chr5.2:82463384-82463403 | None:intergenic | 45.0% |
!! | GAAAGGTGTTTGGGAATCCA+TGG | + | chr5.2:82463144-82463163 | MS.gene91973:CDS | 45.0% |
!! | TCTTGGAGAGGCTTTGAAAG+AGG | + | chr5.2:82462670-82462689 | MS.gene91973:CDS | 45.0% |
AGGTGGAGATGAACCTTGCA+TGG | + | chr5.2:82463368-82463387 | MS.gene91973:intron | 50.0% | |
AGGTGTTTGGGAATCCATGG+AGG | + | chr5.2:82463147-82463166 | MS.gene91973:CDS | 50.0% | |
CTGCTTGCACCTTTCCTCAA+CGG | - | chr5.2:82463454-82463473 | None:intergenic | 50.0% | |
GAAGATGCCTGTGGTTGGAA+TGG | + | chr5.2:82462535-82462554 | MS.gene91973:CDS | 50.0% | |
TGCAAGCAGAGGACCTAATG+AGG | + | chr5.2:82463465-82463484 | MS.gene91973:CDS | 50.0% | |
TGCTTGCACCTTTCCTCAAC+GGG | - | chr5.2:82463453-82463472 | None:intergenic | 50.0% | |
! | GCATTTTCCCCGTTGAGGAA+AGG | + | chr5.2:82463442-82463461 | MS.gene91973:CDS | 50.0% |
! | TAACCGCATTTTCCCCGTTG+AGG | + | chr5.2:82463437-82463456 | MS.gene91973:CDS | 50.0% |
! | TGGCCACTTAGTTCTCAACC+TGG | + | chr5.2:82463073-82463092 | MS.gene91973:CDS | 50.0% |
! | TTGAGGAAAGGTGCAAGCAG+AGG | + | chr5.2:82463454-82463473 | MS.gene91973:CDS | 50.0% |
GCTGATCCCATTCCAACCAC+AGG | - | chr5.2:82462545-82462564 | None:intergenic | 55.0% | |
GCTTGCACCTTTCCTCAACG+GGG | - | chr5.2:82463452-82463471 | None:intergenic | 55.0% | |
! | TCATTGAGTCCGGGCTTGGT+TGG | - | chr5.2:82463709-82463728 | None:intergenic | 55.0% |
ATCCCTGGACCAACCAAGCC+CGG | + | chr5.2:82463697-82463716 | MS.gene91973:CDS | 60.0% | |
GAGGTCATTGAGTCCGGGCT+TGG | - | chr5.2:82463713-82463732 | None:intergenic | 60.0% | |
! | AGTCCGGGCTTGGTTGGTCC+AGG | - | chr5.2:82463703-82463722 | None:intergenic | 65.0% |
! | GTCCGGGCTTGGTTGGTCCA+GGG | - | chr5.2:82463702-82463721 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 82462482 | 82463744 | 82462482 | ID=MS.gene91973 |
chr5.2 | mRNA | 82462482 | 82463744 | 82462482 | ID=MS.gene91973.t1;Parent=MS.gene91973 |
chr5.2 | exon | 82462482 | 82462801 | 82462482 | ID=MS.gene91973.t1.exon1;Parent=MS.gene91973.t1 |
chr5.2 | CDS | 82462482 | 82462801 | 82462482 | ID=cds.MS.gene91973.t1;Parent=MS.gene91973.t1 |
chr5.2 | exon | 82463033 | 82463276 | 82463033 | ID=MS.gene91973.t1.exon2;Parent=MS.gene91973.t1 |
chr5.2 | CDS | 82463033 | 82463276 | 82463033 | ID=cds.MS.gene91973.t1;Parent=MS.gene91973.t1 |
chr5.2 | exon | 82463370 | 82463744 | 82463370 | ID=MS.gene91973.t1.exon3;Parent=MS.gene91973.t1 |
chr5.2 | CDS | 82463370 | 82463744 | 82463370 | ID=cds.MS.gene91973.t1;Parent=MS.gene91973.t1 |
Gene Sequence |
Protein sequence |