AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06369


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06369.t1 MTR_3g096710 90.814 381 31 2 2 381 6 383 0.0 697
MS.gene06369.t1 MTR_3g096710 89.759 332 30 2 2 332 6 334 0.0 624
MS.gene06369.t1 MTR_3g096710 89.728 331 30 2 2 331 6 333 0.0 623
MS.gene06369.t1 MTR_3g096710 88.276 290 30 2 2 290 6 292 0.0 540
MS.gene06369.t1 MTR_3g096710 92.181 243 19 0 90 332 14 256 3.40e-171 478
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06369.t1 AT5G09230 70.079 381 108 2 1 381 2 376 0.0 561
MS.gene06369.t1 AT5G09230 70.968 372 106 1 10 381 4 373 0.0 560
MS.gene06369.t1 AT5G09230 70.968 372 106 1 10 381 4 373 0.0 560
MS.gene06369.t1 AT5G09230 74.000 350 91 0 32 381 5 354 0.0 555
MS.gene06369.t1 AT5G09230 69.350 323 97 1 10 332 4 324 5.33e-171 480
MS.gene06369.t1 AT5G09230 80.000 245 49 0 137 381 27 271 3.62e-149 422
MS.gene06369.t1 AT5G09230 80.000 245 49 0 137 381 27 271 3.62e-149 422

Find 98 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGATACCTATCGACATTT+TGG 0.150792 3.1:+77117003 None:intergenic
GGCAGAAGCAATTGAAAATT+TGG 0.197656 3.1:-77115606 MS.gene06369:CDS
AATTGCTGACCTTTGGATTA+AGG 0.201173 3.1:+77116768 None:intergenic
TGGCTCACCTGGTGGGTTAT+TGG 0.229869 3.1:+77117764 None:intergenic
CCTAATGGTGCTTATAGTTC+TGG 0.247110 3.1:-77117794 MS.gene06369:CDS
GCCGAGCCAGGAGGAGATAT+TGG 0.270807 3.1:-77117133 MS.gene06369:CDS
TCTTTGTAGAAGCTTATTTC+AGG 0.271782 3.1:-77116804 MS.gene06369:CDS
TGAGAACACCATTGCACTTC+TGG 0.276909 3.1:+77115474 None:intergenic
TCGTTTACCGGGAAGGTTCC+GGG 0.277593 3.1:+77118336 None:intergenic
ATACAGAAGGTTGACATCTT+TGG 0.302545 3.1:+77118248 None:intergenic
GATATAAACCGTCCTCCTTT+TGG 0.309502 3.1:+77118408 None:intergenic
ACAGTCCCATGTAATTCTAA+TGG 0.310751 3.1:+77116860 None:intergenic
GCCATATCGGCTCTTTCCTT+TGG 0.319141 3.1:+77114302 None:intergenic
TAATGTCATGAGGGATAAAA+AGG 0.331600 3.1:-77118298 MS.gene06369:CDS
ATCGTTTACCGGGAAGGTTC+CGG 0.336419 3.1:+77118335 None:intergenic
ATTATTTATTTCAGCCCTAA+TGG 0.338167 3.1:-77117809 MS.gene06369:intron
ATTGCTGACCTTTGGATTAA+GGG 0.339352 3.1:+77116769 None:intergenic
ATCTGCTGCTCATTGTGCTT+TGG 0.346640 3.1:-77117066 MS.gene06369:CDS
CCAGAACTATAAGCACCATT+AGG 0.359965 3.1:+77117794 None:intergenic
CATTGCACTTCTGGCAGGTT+GGG 0.375793 3.1:+77115483 None:intergenic
TCCAAAGGAAAGAGCCGATA+TGG 0.377429 3.1:-77114303 MS.gene06369:CDS
AGATGCTTCCATTGCCATAT+CGG 0.402207 3.1:+77114289 None:intergenic
TTGGATTAAGGGACTTCAAC+TGG 0.402388 3.1:+77116780 None:intergenic
CTGCTAGGAACTATTATAAC+AGG 0.405024 3.1:-77118561 MS.gene06369:intron
TGTCTGACCCAGGGCTTCCA+TGG 0.409403 3.1:+77115582 None:intergenic
GGGTAACCATAAAATCAATT+CGG 0.413467 3.1:+77117024 None:intergenic
ATTATGAAGGTTGTCTTCTT+CGG 0.414780 3.1:-77114335 MS.gene06369:intron
CAGTCCCATGTAATTCTAAT+GGG 0.420290 3.1:+77116861 None:intergenic
CACAGGGCAGCTCATGAGGC+TGG 0.421023 3.1:-77114033 MS.gene06369:intron
CAGAACTATAAGCACCATTA+GGG 0.432825 3.1:+77117795 None:intergenic
CCCAATATCTCCTCCTGGCT+CGG 0.435419 3.1:+77117132 None:intergenic
AGGCAGAACCTTCTATAGTC+AGG 0.437249 3.1:+77118065 None:intergenic
CCGAGCCAGGAGGAGATATT+GGG 0.437495 3.1:-77117132 MS.gene06369:CDS
CTCCTTGTATTGACTGGAGC+TGG 0.441040 3.1:-77118110 MS.gene06369:CDS
AGGTTGACATCTTTGGTAGT+AGG 0.442715 3.1:+77118255 None:intergenic
TTGAAAATCAATGCACGATT+GGG 0.448631 3.1:-77113955 MS.gene06369:CDS
TATTGGGCTAGAAGCTATGC+TGG 0.460514 3.1:-77117116 MS.gene06369:CDS
TTCTTCGTTCAAGCCGAGCC+AGG 0.462937 3.1:-77117145 MS.gene06369:CDS
AATTTGGACCATGGAAGCCC+TGG 0.472279 3.1:-77115590 MS.gene06369:CDS
TTGGCAGCTTTCGAGAAAGC+TGG 0.476655 3.1:-77117047 MS.gene06369:CDS
CCTGGGTCAGACAAAAGCTT+TGG 0.483143 3.1:-77115572 MS.gene06369:CDS
ACCAAGCTCCTTGTATTGAC+TGG 0.492188 3.1:-77118116 MS.gene06369:CDS
CCATTGCACTTCTGGCAGGT+TGG 0.492755 3.1:+77115482 None:intergenic
AACTTTGAGCTGTTGAACTC+AGG 0.496037 3.1:+77118442 None:intergenic
TGCAGTCCTTTGTATTTGCA+AGG 0.496432 3.1:-77118587 MS.gene06369:intron
GATCCCATGTCAAGTACTCT+TGG 0.502273 3.1:+77113822 None:intergenic
CGTTTACCGGGAAGGTTCCG+GGG 0.502356 3.1:+77118337 None:intergenic
TGAGTTCAACAGCTCAAAGT+TGG 0.507220 3.1:-77118440 MS.gene06369:CDS
AACACCATTGCACTTCTGGC+AGG 0.512011 3.1:+77115478 None:intergenic
GTGCCTTTGGCTCACCTGGT+GGG 0.513441 3.1:+77117757 None:intergenic
GTGGTATCCCTGACTATAGA+AGG 0.513648 3.1:-77118073 MS.gene06369:intron
GTAGTAGGAGGATCTGCATC+AGG 0.514883 3.1:+77118270 None:intergenic
AGTTGCCCATTAGAATTACA+TGG 0.518703 3.1:-77116866 MS.gene06369:CDS
TTCAGGCTGCACCATCGAGC+TGG 0.518999 3.1:-77116890 MS.gene06369:intron
TCAATCTCAATATCACCATC+AGG 0.519126 3.1:+77115536 None:intergenic
AGTTGGAACTTAGCACCAAA+AGG 0.533341 3.1:-77118423 MS.gene06369:CDS
GCACTTCTGGCAGGTTGGGA+TGG 0.534673 3.1:+77115487 None:intergenic
TTCCAGCTCCAGTCAATACA+AGG 0.535675 3.1:+77118108 None:intergenic
CTTGAAAATCAATGCACGAT+TGG 0.538004 3.1:-77113956 MS.gene06369:CDS
GCAATTGAAAATTTGGACCA+TGG 0.538406 3.1:-77115599 MS.gene06369:CDS
TCCAGTCAATACAAGGAGCT+TGG 0.539077 3.1:+77118115 None:intergenic
TCTAGCCCAATATCTCCTCC+TGG 0.545671 3.1:+77117127 None:intergenic
TTGACATCTTTGGTAGTAGG+AGG 0.555544 3.1:+77118258 None:intergenic
GCTACTGCAATCGTCAATGT+AGG 0.564103 3.1:-77114006 MS.gene06369:CDS
GTATTTGCAAGGAAACTGCT+AGG 0.568484 3.1:-77118576 MS.gene06369:CDS
AATCAATGCACGATTGGGTG+AGG 0.568540 3.1:-77113950 MS.gene06369:intron
TTACACAGCAGGGACGCTGA+TGG 0.576090 3.1:+77113800 None:intergenic
CTTCGGTGATAATGTTCCAA+AGG 0.576117 3.1:-77114318 MS.gene06369:CDS
TGGTTACCCAAAATGTCGAT+AGG 0.577299 3.1:-77117010 MS.gene06369:intron
ACTGTAATTTGTATAGATTG+TGG 0.577480 3.1:-77116833 MS.gene06369:CDS
TCATGTCGAATCTCTGCCCC+CGG 0.578244 3.1:-77118354 MS.gene06369:CDS
GGCAGAACCTTCTATAGTCA+GGG 0.579622 3.1:+77118066 None:intergenic
CTAGAAGCTATGCTGGGTGG+AGG 0.585143 3.1:-77117109 MS.gene06369:CDS
AAAGCACAATGAGCAGCAGA+TGG 0.598287 3.1:+77117068 None:intergenic
GTTTACCGGGAAGGTTCCGG+GGG 0.606936 3.1:+77118338 None:intergenic
GGAAAGAGCCGATATGGCAA+TGG 0.608710 3.1:-77114297 MS.gene06369:CDS
ATTTGGACCATGGAAGCCCT+GGG 0.613997 3.1:-77115589 MS.gene06369:CDS
AAGCTCAGACTAATGTCATG+AGG 0.614735 3.1:-77118308 MS.gene06369:CDS
AGCTCAGACTAATGTCATGA+GGG 0.617233 3.1:-77118307 MS.gene06369:CDS
ATGGGCAACTACCAGCTCGA+TGG 0.623152 3.1:+77116879 None:intergenic
GTTGAAGTCCCTTAATCCAA+AGG 0.626611 3.1:-77116777 MS.gene06369:intron
GACAAGTCGAAAAGCAGACA+TGG 0.628662 3.1:+77114223 None:intergenic
AAAGCTTTGGAATGAAACAA+AGG 0.629664 3.1:-77115559 MS.gene06369:CDS
CAGTTTCCTTGCAAATACAA+AGG 0.631321 3.1:+77118581 None:intergenic
GGAACCTTCCCGGTAAACGA+TGG 0.634258 3.1:-77118333 MS.gene06369:CDS
GGAATGAAACAAAGGCCTGA+TGG 0.637139 3.1:-77115551 MS.gene06369:CDS
CCAACCTGCCAGAAGTGCAA+TGG 0.637167 3.1:-77115482 MS.gene06369:CDS
GTTGCCCATTAGAATTACAT+GGG 0.644261 3.1:-77116865 MS.gene06369:CDS
ATTGGGCTAGAAGCTATGCT+GGG 0.649223 3.1:-77117115 MS.gene06369:CDS
GCTGGAATCAGTACAGAATG+TGG 0.649750 3.1:-77118092 MS.gene06369:CDS
ACTTAGCACCAAAAGGAGGA+CGG 0.658830 3.1:-77118416 MS.gene06369:CDS
TTTCAGACCAATAACCCACC+AGG 0.665283 3.1:-77117771 MS.gene06369:intron
TTCGTTCAAGCCGAGCCAGG+AGG 0.674610 3.1:-77117142 MS.gene06369:CDS
ATTGCCAAGAGTACTTGACA+TGG 0.677222 3.1:-77113826 MS.gene06369:CDS
TTGCCAAGAGTACTTGACAT+GGG 0.680131 3.1:-77113825 MS.gene06369:CDS
TGGAACTTAGCACCAAAAGG+AGG 0.686371 3.1:-77118420 MS.gene06369:CDS
GGGCTAGAAGCTATGCTGGG+TGG 0.690768 3.1:-77117112 MS.gene06369:CDS
ATGAGCAGCAGATGGCTGTG+CGG 0.691254 3.1:+77117076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAATTTCTTAAATATTA+TGG - chr3.1:77115330-77115349 MS.gene06369:intron 10.0%
!! AATTAACCTAATAATAATGA+TGG + chr3.1:77114886-77114905 None:intergenic 15.0%
!! ACATTTATATTGAAGATTTA+TGG - chr3.1:77115578-77115597 MS.gene06369:CDS 15.0%
!! ACTAAAATTTATTATCATTG+AGG - chr3.1:77115034-77115053 MS.gene06369:intron 15.0%
!! GGTTAATTGAATTATTTATT+TGG - chr3.1:77114898-77114917 MS.gene06369:intron 15.0%
!! TAATATGTTATTATGTAGAA+AGG - chr3.1:77116288-77116307 MS.gene06369:intron 15.0%
!! TGAAATTGAAAATAATAACA+TGG + chr3.1:77114098-77114117 None:intergenic 15.0%
!! TTAGAGATATAAACAAAAAA+AGG + chr3.1:77114964-77114983 None:intergenic 15.0%
!!! AATATAGTTCTGATATAAAT+TGG + chr3.1:77118057-77118076 None:intergenic 15.0%
!!! AATTATCAATTCATTTTGTT+GGG + chr3.1:77115247-77115266 None:intergenic 15.0%
!!! ATAATTAACTTGTAATAACT+GGG - chr3.1:77117563-77117582 MS.gene06369:intron 15.0%
!!! ATGAATTGATAATTAATGAA+AGG - chr3.1:77115253-77115272 MS.gene06369:intron 15.0%
!!! TAATTATCAATTCATTTTGT+TGG + chr3.1:77115248-77115267 None:intergenic 15.0%
!!! TCTTATATTTTAGTATGTTA+CGG - chr3.1:77118143-77118162 MS.gene06369:intron 15.0%
!!! TGTATGATTTTTTTGAAAAA+AGG - chr3.1:77114684-77114703 MS.gene06369:intron 15.0%
!! AAAAGTAGAAAGAAATGTAT+AGG - chr3.1:77116807-77116826 MS.gene06369:CDS 20.0%
!! AAGTAAATGATAAATGCAAA+AGG + chr3.1:77116697-77116716 None:intergenic 20.0%
!! AATTATGAAGAACAATAATC+TGG + chr3.1:77117549-77117568 None:intergenic 20.0%
!! AATTGATCATGATAAATAAC+TGG + chr3.1:77115933-77115952 None:intergenic 20.0%
!! ATGAATAGAGAAATATTACT+GGG - chr3.1:77118436-77118455 MS.gene06369:CDS 20.0%
!! ATTGAAAATAATAACATGGA+CGG + chr3.1:77114094-77114113 None:intergenic 20.0%
!! CAACTTAAAAATATCATAGT+TGG + chr3.1:77113921-77113940 None:intergenic 20.0%
!! GAGCTAAATATACAATAAAA+TGG + chr3.1:77114258-77114277 None:intergenic 20.0%
!! TATGAATAGAGAAATATTAC+TGG - chr3.1:77118435-77118454 MS.gene06369:CDS 20.0%
!! TCTCTTTGACATTATTTAAA+AGG - chr3.1:77115743-77115762 MS.gene06369:intron 20.0%
!! TGAGATTAATATAAGTCATT+TGG + chr3.1:77114179-77114198 None:intergenic 20.0%
!! TTAAAGGATTGATAAAATGA+AGG + chr3.1:77117184-77117203 None:intergenic 20.0%
!! TTAAATAATGTCAAAGAGAA+AGG + chr3.1:77115742-77115761 None:intergenic 20.0%
!! TTAATTAGTACTTTGTGAAT+CGG - chr3.1:77116765-77116784 MS.gene06369:intron 20.0%
!! TTTCAAAAAAATCATACAGA+AGG + chr3.1:77114682-77114701 None:intergenic 20.0%
!!! ACTTGCTTATTTTTATTGTT+GGG - chr3.1:77115190-77115209 MS.gene06369:intron 20.0%
!!! ATAGAATAAAAGTTGTTGTT+TGG - chr3.1:77115415-77115434 MS.gene06369:intron 20.0%
!!! ATATTGCAGATATTTTTCTT+TGG + chr3.1:77115357-77115376 None:intergenic 20.0%
!!! ATTATCAATTCATTTTGTTG+GGG + chr3.1:77115246-77115265 None:intergenic 20.0%
!!! ATTATGGGATAGTTTTTAAA+TGG - chr3.1:77117827-77117846 MS.gene06369:intron 20.0%
!!! CATAATTAACTTGTAATAAC+TGG - chr3.1:77117562-77117581 MS.gene06369:intron 20.0%
!!! CTTATATTTTAGTATGTTAC+GGG - chr3.1:77118144-77118163 MS.gene06369:intron 20.0%
!!! GATAGTTTTTAAATGGTTTT+GGG - chr3.1:77117834-77117853 MS.gene06369:intron 20.0%
!!! TAATTAACTTGTAATAACTG+GGG - chr3.1:77117564-77117583 MS.gene06369:intron 20.0%
!!! TAGAATAAAAGTTGTTGTTT+GGG - chr3.1:77115416-77115435 MS.gene06369:intron 20.0%
!!! TATCGGTAGTTATTTTATAT+TGG - chr3.1:77117729-77117748 MS.gene06369:intron 20.0%
!!! TTCTAAATTGTATTTTCACA+GGG - chr3.1:77118865-77118884 MS.gene06369:intron 20.0%
!!! TTTCTAAATTGTATTTTCAC+AGG - chr3.1:77118864-77118883 MS.gene06369:intron 20.0%
! AAACATAGTCATGAAAACTA+AGG - chr3.1:77115645-77115664 MS.gene06369:intron 25.0%
! AACCTAATAATAATGATGGT+AGG + chr3.1:77114882-77114901 None:intergenic 25.0%
! AATATGAAGGGTAAAAACAA+AGG - chr3.1:77117675-77117694 MS.gene06369:intron 25.0%
! AGATGAATGCACAATATAAA+TGG + chr3.1:77118237-77118256 None:intergenic 25.0%
! AGGTATTTACAAAATTACGT+AGG - chr3.1:77118714-77118733 MS.gene06369:intron 25.0%
! ATCTATGAGATTGAAAAAGA+TGG + chr3.1:77114444-77114463 None:intergenic 25.0%
! ATTATTTATTTCAGCCCTAA+TGG - chr3.1:77115105-77115124 MS.gene06369:intron 25.0%
! CAGAGAAATTAGATCATTAA+TGG + chr3.1:77116745-77116764 None:intergenic 25.0%
! CTCTTACACAAAAATATGAA+GGG - chr3.1:77117663-77117682 MS.gene06369:intron 25.0%
! TCTCAGGAAATATGTTTAAT+AGG - chr3.1:77117049-77117068 MS.gene06369:CDS 25.0%
! TCTCTTACACAAAAATATGA+AGG - chr3.1:77117662-77117681 MS.gene06369:intron 25.0%
! TGATAGTTCACAAATACAAT+AGG - chr3.1:77115213-77115232 MS.gene06369:intron 25.0%
! TGCTACAATTGGTTATTTAA+TGG - chr3.1:77115306-77115325 MS.gene06369:intron 25.0%
! TTAAATAACCAATTGTAGCA+TGG + chr3.1:77115306-77115325 None:intergenic 25.0%
! TTCCTACCATCATTATTATT+AGG - chr3.1:77114877-77114896 MS.gene06369:intron 25.0%
! TTGACTGTCATTAATTATGA+AGG - chr3.1:77118566-77118585 MS.gene06369:CDS 25.0%
!! ACTGTAATTTGTATAGATTG+TGG - chr3.1:77116081-77116100 MS.gene06369:intron 25.0%
!! CTATCATTTTGTGTTAGTTA+TGG - chr3.1:77116615-77116634 MS.gene06369:intron 25.0%
!! GGATAGTTTTTAAATGGTTT+TGG - chr3.1:77117833-77117852 MS.gene06369:intron 25.0%
!! TGAGATTGACGAAAAATTTT+GGG - chr3.1:77117392-77117411 MS.gene06369:intron 25.0%
!! TTGAGATTGACGAAAAATTT+TGG - chr3.1:77117391-77117410 MS.gene06369:intron 25.0%
!!! ATATTTTTACTTTGTCTGTG+AGG - chr3.1:77118809-77118828 MS.gene06369:intron 25.0%
!!! GACTTGCTTATTTTTATTGT+TGG - chr3.1:77115189-77115208 MS.gene06369:intron 25.0%
!!! GCAATTTGCGTTTATTTTAT+TGG - chr3.1:77116163-77116182 MS.gene06369:intron 25.0%
!!! TAGAAACTGACTTTTATTGA+TGG + chr3.1:77118013-77118032 None:intergenic 25.0%
!!! TTAGTTTTCATGACTATGTT+TGG + chr3.1:77115646-77115665 None:intergenic 25.0%
!!! TTGCCTTATTTTGTGATTTT+TGG - chr3.1:77113945-77113964 MS.gene06369:intron 25.0%
!!! TTGTGTTATATCTTGTTTTC+AGG - chr3.1:77116007-77116026 MS.gene06369:intron 25.0%
AATCTGGCACAAAATAAACA+GGG + chr3.1:77117533-77117552 None:intergenic 30.0%
ACAAGATATAACACAACTCA+AGG + chr3.1:77116003-77116022 None:intergenic 30.0%
AGATAAGACACAATGATTCT+TGG - chr3.1:77116343-77116362 MS.gene06369:intron 30.0%
AGTTTCACATCTTGAGAATA+TGG - chr3.1:77115003-77115022 MS.gene06369:intron 30.0%
AGTTTGTAAATCTGATAGAG+TGG - chr3.1:77117613-77117632 MS.gene06369:intron 30.0%
ATGATCAATTAAGCCTTCTT+AGG - chr3.1:77115943-77115962 MS.gene06369:intron 30.0%
ATTATGAAGGTTGTCTTCTT+CGG - chr3.1:77118579-77118598 MS.gene06369:CDS 30.0%
ATTGCTTGCAAGATTAAAGA+TGG + chr3.1:77116988-77117007 None:intergenic 30.0%
CAAAAATCAGAAGAAACTTG+TGG + chr3.1:77117242-77117261 None:intergenic 30.0%
CAATCCTTTAACGTAATAGT+TGG - chr3.1:77117193-77117212 MS.gene06369:intron 30.0%
CATGAAAACTAAGGAATTCA+AGG - chr3.1:77115654-77115673 MS.gene06369:intron 30.0%
CTAACATATGTTCATCCTTA+TGG - chr3.1:77114980-77114999 MS.gene06369:intron 30.0%
CTTAAACTCAAATACTACGA+TGG + chr3.1:77115715-77115734 None:intergenic 30.0%
GATATTTGCATCTTGACAAA+AGG - chr3.1:77115451-77115470 MS.gene06369:intron 30.0%
GGGTAACCATAAAATCAATT+CGG + chr3.1:77115893-77115912 None:intergenic 30.0%
TAATCTGGCACAAAATAAAC+AGG + chr3.1:77117534-77117553 None:intergenic 30.0%
TAATGTCATGAGGGATAAAA+AGG - chr3.1:77114616-77114635 MS.gene06369:intron 30.0%
TCTTTGTAGAAGCTTATTTC+AGG - chr3.1:77116110-77116129 MS.gene06369:intron 30.0%
TGCTTCTTTCAGTTATATGT+CGG - chr3.1:77117482-77117501 MS.gene06369:intron 30.0%
TGTTTCTTCAAGCTAAATCA+TGG + chr3.1:77118380-77118399 None:intergenic 30.0%
TTCAAACTGAAATTCAGTCA+AGG + chr3.1:77114770-77114789 None:intergenic 30.0%
TTGAAAATCAATGCACGATT+GGG - chr3.1:77118959-77118978 MS.gene06369:intron 30.0%
TTGAAGATTTATGGCAATGA+CGG - chr3.1:77115587-77115606 MS.gene06369:CDS 30.0%
TTTAGATACCATGCTACAAT+TGG - chr3.1:77115295-77115314 MS.gene06369:intron 30.0%
! ATAAGTACATGGTGTGTTTT+TGG - chr3.1:77118342-77118361 MS.gene06369:CDS 30.0%
! ATGCAACAGTTTGTTCAAAT+TGG + chr3.1:77119059-77119078 None:intergenic 30.0%
! GAAATTACTTGCTGCATATT+TGG - chr3.1:77118831-77118850 MS.gene06369:intron 30.0%
! GTTGTTTGGGTTAATTGAAT+AGG - chr3.1:77115429-77115448 MS.gene06369:intron 30.0%
! TCACTTTCTCAACGTATTTT+TGG - chr3.1:77114714-77114733 MS.gene06369:intron 30.0%
! TGCAACAGTTTGTTCAAATT+GGG + chr3.1:77119058-77119077 None:intergenic 30.0%
!! AAAGCTTTGGAATGAAACAA+AGG - chr3.1:77117355-77117374 MS.gene06369:intron 30.0%
!! ACTTGTTTGACTTCTTTTTG+TGG - chr3.1:77117702-77117721 MS.gene06369:intron 30.0%
!! ATAAGAGTATTGTTCTCTGA+TGG - chr3.1:77116640-77116659 MS.gene06369:intron 30.0%
!! GATGATAGTTGTAGTTTGTT+AGG - chr3.1:77116368-77116387 MS.gene06369:intron 30.0%
!!! AATCGTGCATTGATTTTCAA+GGG + chr3.1:77118959-77118978 None:intergenic 30.0%
!!! AGTTTTTAAATGGTTTTGGG+AGG - chr3.1:77117837-77117856 MS.gene06369:intron 30.0%
!!! CCTTATTTTGTGATTTTTGG+CGG - chr3.1:77113948-77113967 MS.gene06369:intron 30.0%
!!! GATAGAGGCAGATTATTTTT+TGG - chr3.1:77116586-77116605 MS.gene06369:intron 30.0%
!!! GTTTTTAAATGGTTTTGGGA+GGG - chr3.1:77117838-77117857 MS.gene06369:intron 30.0%
AACAGGAAAAATAGTTGCCA+AGG + chr3.1:77118179-77118198 None:intergenic 35.0%
AACAGTCTCTTAAGTTTCTC+AGG - chr3.1:77117033-77117052 MS.gene06369:CDS 35.0%
AATAAAGCAGAGAGTAAGGA+AGG + chr3.1:77114412-77114431 None:intergenic 35.0%
AATTGCTGACCTTTGGATTA+AGG + chr3.1:77116149-77116168 None:intergenic 35.0%
ACAGTCCCATGTAATTCTAA+TGG + chr3.1:77116057-77116076 None:intergenic 35.0%
AGAAAAGGAGAACGTGATTA+TGG - chr3.1:77117811-77117830 MS.gene06369:intron 35.0%
AGAGAAGTTAAACAGTGTAG+TGG - chr3.1:77116538-77116557 MS.gene06369:intron 35.0%
AGCTCCAACTATTACGTTAA+AGG + chr3.1:77117200-77117219 None:intergenic 35.0%
AGGAGTCGGTGAAATAATAA+TGG - chr3.1:77114001-77114020 MS.gene06369:CDS 35.0%
AGTTGCCCATTAGAATTACA+TGG - chr3.1:77116048-77116067 MS.gene06369:intron 35.0%
ATAAAGCAGAGAGTAAGGAA+GGG + chr3.1:77114411-77114430 None:intergenic 35.0%
ATACAGAAGGTTGACATCTT+TGG + chr3.1:77114669-77114688 None:intergenic 35.0%
ATATAACACAACTCAAGGAC+AGG + chr3.1:77115998-77116017 None:intergenic 35.0%
ATATCTCGAGTATCCTAAGA+AGG + chr3.1:77115959-77115978 None:intergenic 35.0%
ATCAGGTCTCTCAAATTTCT+TGG - chr3.1:77117894-77117913 MS.gene06369:intron 35.0%
ATGTGATCAGAAGTGATAAG+TGG + chr3.1:77117081-77117100 None:intergenic 35.0%
ATTGCTGACCTTTGGATTAA+GGG + chr3.1:77116148-77116167 None:intergenic 35.0%
ATTTGGATTGAGAAAGAGAG+AGG + chr3.1:77114162-77114181 None:intergenic 35.0%
CAGAACTATAAGCACCATTA+GGG + chr3.1:77115122-77115141 None:intergenic 35.0%
CAGTCCCATGTAATTCTAAT+GGG + chr3.1:77116056-77116075 None:intergenic 35.0%
CAGTTACGTATAGCAGTTAT+TGG - chr3.1:77117755-77117774 MS.gene06369:intron 35.0%
CAGTTTCCTTGCAAATACAA+AGG + chr3.1:77114336-77114355 None:intergenic 35.0%
CCGCCAAAAATCACAAAATA+AGG + chr3.1:77113951-77113970 None:intergenic 35.0%
CTAATATGTGGTCTTTCAAC+TGG - chr3.1:77117105-77117124 MS.gene06369:CDS 35.0%
CTGCTAGGAACTATTATAAC+AGG - chr3.1:77114353-77114372 MS.gene06369:intron 35.0%
CTTATTATGCTAGCAACACA+TGG - chr3.1:77118486-77118505 MS.gene06369:intron 35.0%
CTTGAAAATCAATGCACGAT+TGG - chr3.1:77118958-77118977 MS.gene06369:intron 35.0%
GAAAAGGAGAACGTGATTAT+GGG - chr3.1:77117812-77117831 MS.gene06369:intron 35.0%
GAGAAGTTAAACAGTGTAGT+GGG - chr3.1:77116539-77116558 MS.gene06369:intron 35.0%
GCAATTGAAAATTTGGACCA+TGG - chr3.1:77117315-77117334 MS.gene06369:intron 35.0%
GGCAGAAGCAATTGAAAATT+TGG - chr3.1:77117308-77117327 MS.gene06369:intron 35.0%
GTACTTATGTCAGAAGAGAT+AGG + chr3.1:77118330-77118349 None:intergenic 35.0%
GTGAAATAAAGCAGAGAGTA+AGG + chr3.1:77114416-77114435 None:intergenic 35.0%
GTGTAAGAGAGATACAGTTA+GGG + chr3.1:77117652-77117671 None:intergenic 35.0%
GTTAAGGTGGAAACAAGAAA+AGG + chr3.1:77114389-77114408 None:intergenic 35.0%
GTTGCCCATTAGAATTACAT+GGG - chr3.1:77116049-77116068 MS.gene06369:intron 35.0%
TAAGAACATCCAGAATGCAA+CGG + chr3.1:77118128-77118147 None:intergenic 35.0%
TAAGACACAATGATTCTTGG+TGG - chr3.1:77116346-77116365 MS.gene06369:intron 35.0%
TAATGATGGTAGGAAGTAAG+AGG + chr3.1:77114872-77114891 None:intergenic 35.0%
TAGTGGGAGTCAGTTATATA+GGG - chr3.1:77116555-77116574 MS.gene06369:intron 35.0%
TCAAGATGTGAAACTCCATA+AGG + chr3.1:77114998-77115017 None:intergenic 35.0%
TCAATCTCAATATCACCATC+AGG + chr3.1:77117381-77117400 None:intergenic 35.0%
TCTCTTCTGACATAAGTACA+TGG - chr3.1:77118331-77118350 MS.gene06369:CDS 35.0%
TGTAAGAGAGATACAGTTAG+GGG + chr3.1:77117651-77117670 None:intergenic 35.0%
TGTGTAAGAGAGATACAGTT+AGG + chr3.1:77117653-77117672 None:intergenic 35.0%
! AACATTGTGTTCTAAACCAG+TGG - chr3.1:77117286-77117305 MS.gene06369:intron 35.0%
! ACATTGTGTTCTAAACCAGT+GGG - chr3.1:77117287-77117306 MS.gene06369:intron 35.0%
! CGGTTTATATCTTTTAAGCG+CGG - chr3.1:77114518-77114537 MS.gene06369:intron 35.0%
! CTCTAAAAGTGAAGATTGCA+TGG - chr3.1:77114938-77114957 MS.gene06369:intron 35.0%
! CTTCTTTTTGTGGCAGTTAT+CGG - chr3.1:77117712-77117731 MS.gene06369:intron 35.0%
! GATTGACGAAAAATTTTGGG+AGG - chr3.1:77117395-77117414 MS.gene06369:intron 35.0%
! GCAACAGTTTGTTCAAATTG+GGG + chr3.1:77119057-77119076 None:intergenic 35.0%
! GTGATGCTTTTCTTGTACTA+GGG - chr3.1:77118655-77118674 MS.gene06369:intron 35.0%
! TGGATACCTATCGACATTTT+GGG + chr3.1:77115913-77115932 None:intergenic 35.0%
! TGTCGGTTATTTGTATTGAG+TGG - chr3.1:77117499-77117518 MS.gene06369:intron 35.0%
! TGTGATGCTTTTCTTGTACT+AGG - chr3.1:77118654-77118673 MS.gene06369:intron 35.0%
!! CTATTTTTCCTGTTTGGCTT+TGG - chr3.1:77118185-77118204 MS.gene06369:intron 35.0%
!! TGGCAACTATTTTTCCTGTT+TGG - chr3.1:77118179-77118198 MS.gene06369:intron 35.0%
!!! CAATCGTGCATTGATTTTCA+AGG + chr3.1:77118960-77118979 None:intergenic 35.0%
AAACGCAAATTGCTGACCTT+TGG + chr3.1:77116156-77116175 None:intergenic 40.0%
AACCATTTGGAAGCTTTCAC+TGG + chr3.1:77116881-77116900 None:intergenic 40.0%
AACTTTGAGCTGTTGAACTC+AGG + chr3.1:77114475-77114494 None:intergenic 40.0%
AAGCTCAGACTAATGTCATG+AGG - chr3.1:77114606-77114625 MS.gene06369:intron 40.0%
AGATGCTTCCATTGCCATAT+CGG + chr3.1:77118628-77118647 None:intergenic 40.0%
AGCATAAACCCGTTGAATAC+TGG + chr3.1:77116452-77116471 None:intergenic 40.0%
AGCTCAGACTAATGTCATGA+GGG - chr3.1:77114607-77114626 MS.gene06369:intron 40.0%
AGCTTGAAGAAACAGACTAC+AGG - chr3.1:77118386-77118405 MS.gene06369:CDS 40.0%
AGGTGGAAACAAGAAAAGGA+AGG + chr3.1:77114385-77114404 None:intergenic 40.0%
AGTTGGAACTTAGCACCAAA+AGG - chr3.1:77114491-77114510 MS.gene06369:intron 40.0%
ATCCAGTGAAAGCTTCCAAA+TGG - chr3.1:77116876-77116895 MS.gene06369:CDS 40.0%
ATCCGAACACTGTCTCTAAA+GGG + chr3.1:77118740-77118759 None:intergenic 40.0%
ATGCTTGAACTAGACGGAAT+AGG - chr3.1:77116467-77116486 MS.gene06369:intron 40.0%
ATTTATGGCAATGACGGTGA+AGG - chr3.1:77115593-77115612 MS.gene06369:CDS 40.0%
CCAGAACTATAAGCACCATT+AGG + chr3.1:77115123-77115142 None:intergenic 40.0%
CCTAATGGTGCTTATAGTTC+TGG - chr3.1:77115120-77115139 MS.gene06369:intron 40.0%
GATCACATGCGTCTAATATG+TGG - chr3.1:77117093-77117112 MS.gene06369:CDS 40.0%
GGAAAAATAGTTGCCAAGGA+AGG + chr3.1:77118175-77118194 None:intergenic 40.0%
GGGTTTATGCTTGAACTAGA+CGG - chr3.1:77116461-77116480 MS.gene06369:intron 40.0%
GTATGGCTTGAAAAGTGATC+TGG - chr3.1:77118986-77119005 MS.gene06369:intron 40.0%
GTATTTGCAAGGAAACTGCT+AGG - chr3.1:77114338-77114357 MS.gene06369:intron 40.0%
GTGAAAGCTTCCAAATGGTT+TGG - chr3.1:77116881-77116900 MS.gene06369:CDS 40.0%
GTTGAAGTCCCTTAATCCAA+AGG - chr3.1:77116137-77116156 MS.gene06369:intron 40.0%
TATTGTTCTCTGATGGAGCT+TGG - chr3.1:77116647-77116666 MS.gene06369:intron 40.0%
TCCGATAAAGAAAAGCGAAG+AGG - chr3.1:77114028-77114047 MS.gene06369:CDS 40.0%
TGAAAACATTGATGTGCGCT+CGG - chr3.1:77118274-77118293 MS.gene06369:CDS 40.0%
TGAGTTCAACAGCTCAAAGT+TGG - chr3.1:77114474-77114493 MS.gene06369:intron 40.0%
TGCAGTCCTTTGTATTTGCA+AGG - chr3.1:77114327-77114346 MS.gene06369:CDS 40.0%
TGGTTACCCAAAATGTCGAT+AGG - chr3.1:77115904-77115923 MS.gene06369:intron 40.0%
TGTTCTCTTGAAGTATAGCG+CGG - chr3.1:77118083-77118102 MS.gene06369:CDS 40.0%
TTGGATTAAGGGACTTCAAC+TGG + chr3.1:77116137-77116156 None:intergenic 40.0%
TTTATGGCAATGACGGTGAA+GGG - chr3.1:77115594-77115613 MS.gene06369:CDS 40.0%
! AGGTTGACATCTTTGGTAGT+AGG + chr3.1:77114662-77114681 None:intergenic 40.0%
! CTGGATACCTATCGACATTT+TGG + chr3.1:77115914-77115933 None:intergenic 40.0%
! CTTCCAAATGGTTTGGACTT+CGG - chr3.1:77116888-77116907 MS.gene06369:CDS 40.0%
! CTTCGGTGATAATGTTCCAA+AGG - chr3.1:77118596-77118615 MS.gene06369:intron 40.0%
! GATATAAACCGTCCTCCTTT+TGG + chr3.1:77114509-77114528 None:intergenic 40.0%
! GTAGTGGGAGTCAGTTATAT+AGG - chr3.1:77116554-77116573 MS.gene06369:intron 40.0%
! GTTTGTTGGGATTATCCATG+AGG - chr3.1:77116504-77116523 MS.gene06369:intron 40.0%
! TGAGCTTTTCCATCGTTTAC+CGG + chr3.1:77114593-77114612 None:intergenic 40.0%
! TTCCAAATGGTTTGGACTTC+GGG - chr3.1:77116889-77116908 MS.gene06369:intron 40.0%
! TTGACATCTTTGGTAGTAGG+AGG + chr3.1:77114659-77114678 None:intergenic 40.0%
!! AGCTGGCCGAATTGATTTTA+TGG - chr3.1:77115884-77115903 MS.gene06369:intron 40.0%
!! ATTGCCAAGAGTACTTGACA+TGG - chr3.1:77119088-77119107 MS.gene06369:intron 40.0%
!! CTTCGCTTTTCTTTATCGGA+CGG + chr3.1:77114028-77114047 None:intergenic 40.0%
!! GCCTCTTCGCTTTTCTTTAT+CGG + chr3.1:77114032-77114051 None:intergenic 40.0%
!! TGACGAAAAATTTTGGGAGG+AGG - chr3.1:77117398-77117417 MS.gene06369:intron 40.0%
!! TTGCCAAGAGTACTTGACAT+GGG - chr3.1:77119089-77119108 MS.gene06369:intron 40.0%
AAAGCACAATGAGCAGCAGA+TGG + chr3.1:77115849-77115868 None:intergenic 45.0%
AACCCGTTGAATACTGGACT+AGG + chr3.1:77116446-77116465 None:intergenic 45.0%
AATCAATGCACGATTGGGTG+AGG - chr3.1:77118964-77118983 MS.gene06369:intron 45.0%
AATTCTTGGAGGGAGAGATC+AGG - chr3.1:77117877-77117896 MS.gene06369:intron 45.0%
ACCCGTTGAATACTGGACTA+GGG + chr3.1:77116445-77116464 None:intergenic 45.0%
ACTTAGCACCAAAAGGAGGA+CGG - chr3.1:77114498-77114517 MS.gene06369:intron 45.0%
AGAAAGAGAGAGGAGGAGAA+GGG + chr3.1:77114152-77114171 None:intergenic 45.0%
AGACCGATCTCTCGAATTCT+TGG - chr3.1:77117863-77117882 MS.gene06369:intron 45.0%
AGAGTAAGGAAGGGTTAAGG+TGG + chr3.1:77114402-77114421 None:intergenic 45.0%
AGGCAGAACCTTCTATAGTC+AGG + chr3.1:77114852-77114871 None:intergenic 45.0%
ATCTGCTGCTCATTGTGCTT+TGG - chr3.1:77115848-77115867 MS.gene06369:intron 45.0%
ATGAGAGAAGTGGGCCAAAT+GGG - chr3.1:77116398-77116417 MS.gene06369:intron 45.0%
CAGAATGCAACGGAACAAAC+AGG + chr3.1:77118118-77118137 None:intergenic 45.0%
CAGAGAGTAAGGAAGGGTTA+AGG + chr3.1:77114405-77114424 None:intergenic 45.0%
CATCCGAACACTGTCTCTAA+AGG + chr3.1:77118741-77118760 None:intergenic 45.0%
CCTCCAAGAATTCGAGAGAT+CGG + chr3.1:77117869-77117888 None:intergenic 45.0%
CGATCTCTCGAATTCTTGGA+GGG - chr3.1:77117867-77117886 MS.gene06369:intron 45.0%
CGATCTGACGATCAAAGTCA+TGG - chr3.1:77116252-77116271 MS.gene06369:intron 45.0%
CTGTTTGTTCCGTTGCATTC+TGG - chr3.1:77118116-77118135 MS.gene06369:CDS 45.0%
CTTACGATGAGAGAGGAAGA+AGG + chr3.1:77114127-77114146 None:intergenic 45.0%
GAAGAGATAGGTCAGCATCA+AGG + chr3.1:77118318-77118337 None:intergenic 45.0%
GAAGCAAGATGACCTACATC+AGG + chr3.1:77117468-77117487 None:intergenic 45.0%
GACAAGTCGAAAAGCAGACA+TGG + chr3.1:77118694-77118713 None:intergenic 45.0%
GATCCCATGTCAAGTACTCT+TGG + chr3.1:77119095-77119114 None:intergenic 45.0%
GCTACTGCAATCGTCAATGT+AGG - chr3.1:77118908-77118927 MS.gene06369:intron 45.0%
GCTGGAATCAGTACAGAATG+TGG - chr3.1:77114822-77114841 MS.gene06369:intron 45.0%
GCTTGAAAAGTGATCTGGAC+TGG - chr3.1:77118991-77119010 MS.gene06369:intron 45.0%
GGAATAGGAAAGAGCAGAGT+GGG - chr3.1:77116482-77116501 MS.gene06369:intron 45.0%
GGAATGAAACAAAGGCCTGA+TGG - chr3.1:77117363-77117382 MS.gene06369:intron 45.0%
GGCAGAACCTTCTATAGTCA+GGG + chr3.1:77114851-77114870 None:intergenic 45.0%
GGTGTTCTCAAACCTGATGT+AGG - chr3.1:77117453-77117472 MS.gene06369:intron 45.0%
GTGGTATCCCTGACTATAGA+AGG - chr3.1:77114841-77114860 MS.gene06369:intron 45.0%
GTGGTCTTTCAACTGGAAGT+TGG - chr3.1:77117112-77117131 MS.gene06369:CDS 45.0%
GTTACGGGATTATCCTTCCT+TGG - chr3.1:77118159-77118178 MS.gene06369:intron 45.0%
TACCCGAAGTCCAAACCATT+TGG + chr3.1:77116894-77116913 None:intergenic 45.0%
TAGTCTAGCCAAAGCCAAAC+AGG + chr3.1:77118196-77118215 None:intergenic 45.0%
TATAGGGACTGAAGCGATAG+AGG - chr3.1:77116571-77116590 MS.gene06369:intron 45.0%
TATGAGAGAAGTGGGCCAAA+TGG - chr3.1:77116397-77116416 MS.gene06369:intron 45.0%
TCCAAAGGAAAGAGCCGATA+TGG - chr3.1:77118611-77118630 MS.gene06369:intron 45.0%
TCCAGTCAATACAAGGAGCT+TGG + chr3.1:77114802-77114821 None:intergenic 45.0%
TCGGATGAACGAGAGAGATT+TGG - chr3.1:77118754-77118773 MS.gene06369:intron 45.0%
TGAGAACACCATTGCACTTC+TGG + chr3.1:77117443-77117462 None:intergenic 45.0%
TGGAACTTAGCACCAAAAGG+AGG - chr3.1:77114494-77114513 MS.gene06369:intron 45.0%
TGGACTTCGGGTAACAATAC+TGG - chr3.1:77116901-77116920 MS.gene06369:intron 45.0%
TGGATTGAGAAAGAGAGAGG+AGG + chr3.1:77114159-77114178 None:intergenic 45.0%
TTATGGCAATGACGGTGAAG+GGG - chr3.1:77115595-77115614 MS.gene06369:CDS 45.0%
TTCCAGCTCCAGTCAATACA+AGG + chr3.1:77114809-77114828 None:intergenic 45.0%
TTGAGAGCAGAAGCTTTCAC+TGG + chr3.1:77116848-77116867 None:intergenic 45.0%
TTGGCCCACTTCTCTCATAT+GGG + chr3.1:77116396-77116415 None:intergenic 45.0%
TTTCAATTGCTTCTGCCCAC+TGG + chr3.1:77117305-77117324 None:intergenic 45.0%
TTTCAGACCAATAACCCACC+AGG - chr3.1:77115143-77115162 MS.gene06369:intron 45.0%
TTTGGCCCACTTCTCTCATA+TGG + chr3.1:77116397-77116416 None:intergenic 45.0%
! AAAGAGCAGAGTGGGTTTGT+TGG - chr3.1:77116490-77116509 MS.gene06369:intron 45.0%
! AAGAGCAGAGTGGGTTTGTT+GGG - chr3.1:77116491-77116510 MS.gene06369:intron 45.0%
! ACCAAGCTCCTTGTATTGAC+TGG - chr3.1:77114798-77114817 MS.gene06369:intron 45.0%
! ATTGGGCTAGAAGCTATGCT+GGG - chr3.1:77115799-77115818 MS.gene06369:intron 45.0%
! CAAAGCTTTTGTCTGACCCA+GGG + chr3.1:77117344-77117363 None:intergenic 45.0%
! GAGCTTTTCCATCGTTTACC+GGG + chr3.1:77114592-77114611 None:intergenic 45.0%
! TATCTTTTAAGCGCGGTGCA+AGG - chr3.1:77114525-77114544 MS.gene06369:intron 45.0%
! TATTGGGCTAGAAGCTATGC+TGG - chr3.1:77115798-77115817 MS.gene06369:intron 45.0%
! TTTTCCATCGTTTACCGGGA+AGG + chr3.1:77114588-77114607 None:intergenic 45.0%
!! TGTCTGCTTTTCGACTTGTC+AGG - chr3.1:77118694-77118713 MS.gene06369:intron 45.0%
!! TTATTTCACCGACTCCTCCA+CGG + chr3.1:77113998-77114017 None:intergenic 45.0%
!!! TTAATTAATTAATTGTTTTA+TGG + chr3.1:77114229-77114248 None:intergenic 5.0%
AACACCATTGCACTTCTGGC+AGG + chr3.1:77117439-77117458 None:intergenic 50.0%
AAGGGGACTTACGATGAGAG+AGG + chr3.1:77114134-77114153 None:intergenic 50.0%
AATTTGGACCATGGAAGCCC+TGG - chr3.1:77117324-77117343 MS.gene06369:intron 50.0%
AGGACCCCATATGAGAGAAG+TGG - chr3.1:77116388-77116407 MS.gene06369:intron 50.0%
AGTCTAGTTGACCGTGCCTT+TGG + chr3.1:77115173-77115192 None:intergenic 50.0%
ATCGTTTACCGGGAAGGTTC+CGG + chr3.1:77114582-77114601 None:intergenic 50.0%
ATGCACGATTGGGTGAGGTA+TGG - chr3.1:77118969-77118988 MS.gene06369:intron 50.0%
ATTTGGACCATGGAAGCCCT+GGG - chr3.1:77117325-77117344 MS.gene06369:intron 50.0%
CATTGCACTTCTGGCAGGTT+GGG + chr3.1:77117434-77117453 None:intergenic 50.0%
CCCCCTAGTCCAGTATTCAA+CGG - chr3.1:77116440-77116459 MS.gene06369:intron 50.0%
CCCCTAGTCCAGTATTCAAC+GGG - chr3.1:77116441-77116460 MS.gene06369:intron 50.0%
CCGATCTCTCGAATTCTTGG+AGG - chr3.1:77117866-77117885 MS.gene06369:intron 50.0%
CCTGGGTCAGACAAAAGCTT+TGG - chr3.1:77117342-77117361 MS.gene06369:intron 50.0%
CGGAATAGGAAAGAGCAGAG+TGG - chr3.1:77116481-77116500 MS.gene06369:intron 50.0%
GAAAGAGAGAGGAGGAGAAG+GGG + chr3.1:77114151-77114170 None:intergenic 50.0%
GAAGTATAGCGCGGCTGAAT+GGG - chr3.1:77118092-77118111 MS.gene06369:CDS 50.0%
GAGAAAGAGAGAGGAGGAGA+AGG + chr3.1:77114153-77114172 None:intergenic 50.0%
GGAAAGAGCCGATATGGCAA+TGG - chr3.1:77118617-77118636 MS.gene06369:intron 50.0%
GGACCCCATATGAGAGAAGT+GGG - chr3.1:77116389-77116408 MS.gene06369:intron 50.0%
GTAGTAGGAGGATCTGCATC+AGG + chr3.1:77114647-77114666 None:intergenic 50.0%
TATGGCAATGACGGTGAAGG+GGG - chr3.1:77115596-77115615 MS.gene06369:CDS 50.0%
TCTAGCCCAATATCTCCTCC+TGG + chr3.1:77115790-77115809 None:intergenic 50.0%
TGAAGTATAGCGCGGCTGAA+TGG - chr3.1:77118091-77118110 MS.gene06369:CDS 50.0%
TGCTGTTCTACCAGCCCATT+TGG + chr3.1:77116415-77116434 None:intergenic 50.0%
TGGCCCACTTCTCTCATATG+GGG + chr3.1:77116395-77116414 None:intergenic 50.0%
TTCACGATTTGCGCTCGCAT+TGG + chr3.1:77114065-77114084 None:intergenic 50.0%
TTGGCAGCTTTCGAGAAAGC+TGG - chr3.1:77115867-77115886 MS.gene06369:intron 50.0%
! CCAAAGCTTTTGTCTGACCC+AGG + chr3.1:77117345-77117364 None:intergenic 50.0%
! CCCGTTGAATACTGGACTAG+GGG + chr3.1:77116444-77116463 None:intergenic 50.0%
! CCGTTGAATACTGGACTAGG+GGG + chr3.1:77116443-77116462 None:intergenic 50.0%
! CGTTGAATACTGGACTAGGG+GGG + chr3.1:77116442-77116461 None:intergenic 50.0%
! GGCCCTTTAGAGACAGTGTT+CGG - chr3.1:77118735-77118754 MS.gene06369:intron 50.0%
! TTTTCACAGGGCAGCTCATG+AGG - chr3.1:77118877-77118896 MS.gene06369:intron 50.0%
!! CTCCTTGTATTGACTGGAGC+TGG - chr3.1:77114804-77114823 MS.gene06369:intron 50.0%
!! GCCATATCGGCTCTTTCCTT+TGG + chr3.1:77118615-77118634 None:intergenic 50.0%
ATGAGCAGCAGATGGCTGTG+CGG + chr3.1:77115841-77115860 None:intergenic 55.0%
ATGGCAATGACGGTGAAGGG+GGG - chr3.1:77115597-77115616 MS.gene06369:CDS 55.0%
ATGGGCAACTACCAGCTCGA+TGG + chr3.1:77116038-77116057 None:intergenic 55.0%
CCATTGCACTTCTGGCAGGT+TGG + chr3.1:77117435-77117454 None:intergenic 55.0%
CCCAATATCTCCTCCTGGCT+CGG + chr3.1:77115785-77115804 None:intergenic 55.0%
CCGAGCCAGGAGGAGATATT+GGG - chr3.1:77115782-77115801 MS.gene06369:intron 55.0%
CTAGAAGCTATGCTGGGTGG+AGG - chr3.1:77115805-77115824 MS.gene06369:intron 55.0%
CTCTCTCACTCTCTGCCTCA+TGG + chr3.1:77116522-77116541 None:intergenic 55.0%
GGAACCTTCCCGGTAAACGA+TGG - chr3.1:77114581-77114600 MS.gene06369:intron 55.0%
TAACCCACCAGGTGAGCCAA+AGG - chr3.1:77115154-77115173 MS.gene06369:intron 55.0%
TCATGTCGAATCTCTGCCCC+CGG - chr3.1:77114560-77114579 MS.gene06369:intron 55.0%
TCGTTTACCGGGAAGGTTCC+GGG + chr3.1:77114581-77114600 None:intergenic 55.0%
TTACACAGCAGGGACGCTGA+TGG + chr3.1:77119117-77119136 None:intergenic 55.0%
TTCTTCGTTCAAGCCGAGCC+AGG - chr3.1:77115769-77115788 MS.gene06369:intron 55.0%
! CCAACCTGCCAGAAGTGCAA+TGG - chr3.1:77117432-77117451 MS.gene06369:intron 55.0%
! CGGCAGAGAAGTACGTAACG+TGG - chr3.1:77113968-77113987 MS.gene06369:CDS 55.0%
!! CTGATGGAGCTTGGCTCTGT+TGG - chr3.1:77116656-77116675 MS.gene06369:intron 55.0%
!! TGGCTCACCTGGTGGGTTAT+TGG + chr3.1:77115153-77115172 None:intergenic 55.0%
CACCAGGTGAGCCAAAGGCA+CGG - chr3.1:77115159-77115178 MS.gene06369:intron 60.0%
CGTTTACCGGGAAGGTTCCG+GGG + chr3.1:77114580-77114599 None:intergenic 60.0%
GAGAAGTGGGCCAAATGGGC+TGG - chr3.1:77116402-77116421 MS.gene06369:intron 60.0%
GCCGAGCCAGGAGGAGATAT+TGG - chr3.1:77115781-77115800 MS.gene06369:intron 60.0%
GGGCTAGAAGCTATGCTGGG+TGG - chr3.1:77115802-77115821 MS.gene06369:intron 60.0%
GTTTACCGGGAAGGTTCCGG+GGG + chr3.1:77114579-77114598 None:intergenic 60.0%
TGTCTGACCCAGGGCTTCCA+TGG + chr3.1:77117335-77117354 None:intergenic 60.0%
TTCAGGCTGCACCATCGAGC+TGG - chr3.1:77116024-77116043 MS.gene06369:intron 60.0%
TTCGTTCAAGCCGAGCCAGG+AGG - chr3.1:77115772-77115791 MS.gene06369:intron 60.0%
! GCACTTCTGGCAGGTTGGGA+TGG + chr3.1:77117430-77117449 None:intergenic 60.0%
! GTGCCTTTGGCTCACCTGGT+GGG + chr3.1:77115160-77115179 None:intergenic 60.0%
!! GTACGTAACGTGGAGCACCG+TGG - chr3.1:77113978-77113997 MS.gene06369:CDS 60.0%
CACAGGGCAGCTCATGAGGC+TGG - chr3.1:77118881-77118900 MS.gene06369:intron 65.0%
! CGTGCCTTTGGCTCACCTGG+TGG + chr3.1:77115161-77115180 None:intergenic 65.0%
! GACCGTGCCTTTGGCTCACC+TGG + chr3.1:77115164-77115183 None:intergenic 65.0%
!! CGTAACGTGGAGCACCGTGG+AGG - chr3.1:77113981-77114000 MS.gene06369:CDS 65.0%
!! GTGGAGCACCGTGGAGGAGT+CGG - chr3.1:77113987-77114006 MS.gene06369:CDS 65.0%
CTCTGCCCCCGGAACCTTCC+CGG - chr3.1:77114571-77114590 MS.gene06369:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 77113800 77119136 77113800 ID=MS.gene06369
chr3.1 mRNA 77113800 77119136 77113800 ID=MS.gene06369.t1;Parent=MS.gene06369
chr3.1 exon 77119125 77119136 77119125 ID=MS.gene06369.t1.exon1;Parent=MS.gene06369.t1
chr3.1 CDS 77119125 77119136 77119125 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77118562 77118604 77118562 ID=MS.gene06369.t1.exon2;Parent=MS.gene06369.t1
chr3.1 CDS 77118562 77118604 77118562 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77118231 77118474 77118231 ID=MS.gene06369.t1.exon3;Parent=MS.gene06369.t1
chr3.1 CDS 77118231 77118474 77118231 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77118074 77118139 77118074 ID=MS.gene06369.t1.exon4;Parent=MS.gene06369.t1
chr3.1 CDS 77118074 77118139 77118074 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77117772 77117817 77117772 ID=MS.gene06369.t1.exon5;Parent=MS.gene06369.t1
chr3.1 CDS 77117772 77117817 77117772 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77117011 77117171 77117011 ID=MS.gene06369.t1.exon6;Parent=MS.gene06369.t1
chr3.1 CDS 77117011 77117171 77117011 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77116778 77116907 77116778 ID=MS.gene06369.t1.exon7;Parent=MS.gene06369.t1
chr3.1 CDS 77116778 77116907 77116778 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77115466 77115630 77115466 ID=MS.gene06369.t1.exon8;Parent=MS.gene06369.t1
chr3.1 CDS 77115466 77115630 77115466 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77114221 77114348 77114221 ID=MS.gene06369.t1.exon9;Parent=MS.gene06369.t1
chr3.1 CDS 77114221 77114348 77114221 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77113951 77114050 77113951 ID=MS.gene06369.t1.exon10;Parent=MS.gene06369.t1
chr3.1 CDS 77113951 77114050 77113951 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
chr3.1 exon 77113800 77113850 77113800 ID=MS.gene06369.t1.exon11;Parent=MS.gene06369.t1
chr3.1 CDS 77113800 77113850 77113800 ID=cds.MS.gene06369.t1;Parent=MS.gene06369.t1
Gene Sequence

>MS.gene06369

ATGAGCATGAACGTAATTAACTATATTCATTAACAATCTACAAAATATATAATAATTAGTAGTATAATCTAATTCGTTTAAAAAAAATGTGAATTTTTGTGTGAAAATAATAGTACAACCAACTATGATATTTTTAAGTTGTGTGTTGCCTTATTTTGTGATTTTTGGCGGCAGAGAAGTACGTAACGTGGAGCACCGTGGAGGAGTCGGTGAAATAATAATGGACCGTCCGATAAAGAAAAGCGAAGAGGCGACGATTTTACCAATGCGAGCGCAAATCGTGAAGAGTCTCCGTCCATGTTATTATTTTCAATTTCAATGTCTCCTTCTTCCTCTCTCATCGTAAGTCCCCTTCTCCTCCTCTCTCTTTCTCAATCCAAATGACTTATATTAATCTCAAAATCATGTTGATCTCTACTCAATTAACCATAAAACAATTAATTAATTAATTAACACCATTTTATTGTATATTTAGCTCAACACAACTCAAGTGCTTCATTAATGTTATTTTTATTTTATCTAAACATTGCAGTCCTTTGTATTTGCAAGGAAACTGCTAGGAACTATTATAACAGGCATCTTCCTTCCTTTTCTTGTTTCCACCTTAACCCTTCCTTACTCTCTGCTTTATTTCACTAACTCCATCTTTTTCAATCTCATAGATATTGCTTGCCTGAGTTCAACAGCTCAAAGTTGGAACTTAGCACCAAAAGGAGGACGGTTTATATCTTTTAAGCGCGGTGCAAGGTTCGTGCAAACATCATGTCGAATCTCTGCCCCCGGAACCTTCCCGGTAAACGATGGAAAAGCTCAGACTAATGTCATGAGGGATAAAAAGGTAGTTCCTGATGCAGATCCTCCTACTACCAAAGATGTCAACCTTCTGTATGATTTTTTTGAAAAAAGGTTCATTTTCACTTTCTCAACGTATTTTTGGTTAAAACTATGTTTTGAAAATGTAACAGATCCTTGACTGAATTTCAGTTTGAATTCACAGTACCAAGCTCCTTGTATTGACTGGAGCTGGAATCAGTACAGAATGTGGTATCCCTGACTATAGAAGGTTCTGCCTCTTACTTCCTACCATCATTATTATTAGGTTAATTGAATTATTTATTTGGCGACAATAAATCTTATGCTCTAAAAGTGAAGATTGCATGGCCTTTTTTTGTTTATATCTCTAACATATGTTCATCCTTATGGAGTTTCACATCTTGAGAATATGGAATAAATTACTAAAATTTATTATCATTGAGGCTAGAATGCTAACTTTTTATTCTTCTTCTGTTTCACTGATCGCAATTTATTATTTATTTCAGCCCTAATGGTGCTTATAGTTCTGGTTTCAGACCAATAACCCACCAGGTGAGCCAAAGGCACGGTCAACTAGACTTGCTTATTTTTATTGTTGGGTGATAGTTCACAAATACAATAGGAAAATATCCCCAACAAAATGAATTGATAATTAATGAAAGGAAAACGTAGATCTCTCACATTTAGATACCATGCTACAATTGGTTATTTAATGGCGTAAAATTTCTTAAATATTATGGTCCAAAGAAAAATATCTGCAATATATATATATATATAGTATCTTTGATCAAGTCTTTTTAAAATAGAATAAAAGTTGTTGTTTGGGTTAATTGAATAGGATATTTGCATCTTGACAAAAGGAAAGTCGAGCAAGAAAACATAGAGAAACAAAATTCTCTTCATCTACAAAAACAGAAAAATTCAAATATTAATAAGTAATAACTGATTTAGAATTTAGCATCAGCACATTTATATTGAAGATTTATGGCAATGACGGTGAAGGGGGGAAAAACTCAACTAGTGATTCATGCCAAACATAGTCATGAAAACTAAGGAATTCAAGGATTGACTACATAATCACAAACTTATTTTTTCAATTCCATCGTAGTATTTGAGTTTAAGCTCTCCTTTCTCTTTGACATTATTTAAAAGGAGTTTCTTCGTTCAAGCCGAGCCAGGAGGAGATATTGGGCTAGAAGCTATGCTGGGTGGAGGCAGTTTACTGCCGCACAGCCATCTGCTGCTCATTGTGCTTTGGCAGCTTTCGAGAAAGCTGGCCGAATTGATTTTATGGTTACCCAAAATGTCGATAGGTATCCAGTTATTTATCATGATCAATTAAGCCTTCTTAGGATACTCGAGATATTACATTTTCATGCAATCCTGTCCTTGAGTTGTGTTATATCTTGTTTTCAGGCTGCACCATCGAGCTGGTAGTTGCCCATTAGAATTACATGGGACTGTATATACTGTAATTTGTATAGATTGTGGACACTCTCTTTGTAGAAGCTTATTTCAGGACCAGTTGAAGTCCCTTAATCCAAAGGTCAGCAATTTGCGTTTATTTTATTGGAAATTTGTGTAGTGAATGAACAAATGCTTATGAACTGTTTTTTCAATTTAAAAATTGTTGATGAAGCGATCTGACGATCAAAGTCATGGTATTCGAAAGATCTAATATGTTATTATGTAGAAAGGTTTAAAATGTCATGTAGAAATATTTAAAACTTAGATAAGACACAATGATTCTTGGTGGATGATAGTTGTAGTTTGTTAGGACCCCATATGAGAGAAGTGGGCCAAATGGGCTGGTAGAACAGCAGCAACCCCCCTAGTCCAGTATTCAACGGGTTTATGCTTGAACTAGACGGAATAGGAAAGAGCAGAGTGGGTTTGTTGGGATTATCCATGAGGCAGAGAGTGAGAGAGAAGTTAAACAGTGTAGTGGGAGTCAGTTATATAGGGACTGAAGCGATAGAGGCAGATTATTTTTTGGAATTATCTATCATTTTGTGTTAGTTATGGACATAAGAGTATTGTTCTCTGATGGAGCTTGGCTCTGTTGGCATTAGAATATTCATCCTTTTGCATTTATCATTTACTTTCATTAATAATATACTGTTGTTTTTCCATTAATGATCTAATTTCTCTGTTAATTAGTACTTTGTGAATCGGTTTTGCATAATAATAACTAAAAAGTAGAAAGAAATGTATAGGAAAAGACAAGTATATCCAGTGAAAGCTTCTGCTCTCAAAAAAAAAAATCCAGTGAAAGCTTCCAAATGGTTTGGACTTCGGGTAACAATACTGGCTATTAAACTTCTGCTTAGTTCTAGAAAGAATAGAGATAAAACGAAAATTGAGTGAGTGTGCCATCTTTAATCTTGCAAGCAATACTAAAATTGTAAAGCATACATTGAAACAGTCTCTTAAGTTTCTCAGGAAATATGTTTAATAGGTTTCAACCACTTATCACTTCTGATCACATGCGTCTAATATGTGGTCTTTCAACTGGAAGTTGGAAAATATGACTTATGCATGATTGTCATTTTAAAAGTATAAAAATTGCCTTCATTTTATCAATCCTTTAACGTAATAGTTGGAGCTTGTCTCAAACTATAAGACTCCACAAGTTTCTTCTGATTTTTGCTTTTCTGCTGATTCTAATTTTGAAACATTGTGTTCTAAACCAGTGGGCAGAAGCAATTGAAAATTTGGACCATGGAAGCCCTGGGTCAGACAAAAGCTTTGGAATGAAACAAAGGCCTGATGGTGATATTGAGATTGACGAAAAATTTTGGGAGGAGGATTTTACCATCCCAACCTGCCAGAAGTGCAATGGTGTTCTCAAACCTGATGTAGGTCATCTTGCTTCTTTCAGTTATATGTCGGTTATTTGTATTGAGTGGTTACTTGACCCTGTTTATTTTGTGCCAGATTATTGTTCTTCATAATTAACTTGTAATAACTGGGGACAAGAGAAACATAAGCTCAAATTATAGTTTGTAAATCTGATAGAGTGGAGAACATATGAGCCCCTAACTGTATCTCTCTTACACAAAAATATGAAGGGTAAAAACAAAGGAAGAACTTGTTTGACTTCTTTTTGTGGCAGTTATCGGTAGTTATTTTATATTGGTGTCAGTTACGTATAGCAGTTATTGGTTATGTGTATTTCTGTTTTAGAAAGTATAAAAAAGAAAAGGAGAACGTGATTATGGGATAGTTTTTAAATGGTTTTGGGAGGGAGAGACCGATCTCTCGAATTCTTGGAGGGAGAGATCAGGTCTCTCAAATTTCTTGGATAGTAGTTGTGCATAATATCTCTTTCTTAGTTTATCTGTGAATTCTACATTATCTATAATGCGTGTAATTCTTTTTGTTGCAAACGTTTCTGCCATCAATAAAAGTCAGTTTCTACAATTAAATTATATTTTAGTACCAATTTATATCAGAACTATATTAAAAAATGTTCTCTTGAAGTATAGCGCGGCTGAATGGGCCTGTTTGTTCCGTTGCATTCTGGATGTTCTTATATTTTAGTATGTTACGGGATTATCCTTCCTTGGCAACTATTTTTCCTGTTTGGCTTTGGCTAGACTAAAGTTTCGACTATGATCGCCATTTATATTGTGCATTCATCTGCTTGATTTGTTTTATGTGAAAACATTGATGTGCGCTCGGCTGCATCTTTTCTCAGTTCCTTGATGCTGACCTATCTCTTCTGACATAAGTACATGGTGTGTTTTTGGACTTGTGATATTCCATGATTTAGCTTGAAGAAACAGACTACAGGTGCTTTCTGAACAAATTAAGTTATTTTATGAATAGAGAAATATTACTGGGTGAATTATCTATCTGATTGTTTTGTGTCTTATTATGCTAGCAACACATGGACTCTTGTTTGAGTAAATTAAACGTGAATTGTTTACATTGTGTTCTCAATGTATGTTTTGACTGTCATTAATTATGAAGGTTGTCTTCTTCGGTGATAATGTTCCAAAGGAAAGAGCCGATATGGCAATGGAAGCATCTAGAAGTTGTGATGCTTTTCTTGTACTAGGGTCGTCTGTGATGACCATGTCTGCTTTTCGACTTGTCAGGTATTTACAAAATTACGTAGGCCCTTTAGAGACAGTGTTCGGATGAACGAGAGAGATTTGGAAAGAATTCATTCTTGAACTACAAGCTATGAAATATTTTTACTTTGTCTGTGAGGAAATTACTTGCTGCATATTTGGCATCATTTCATTTCTAAATTGTATTTTCACAGGGCAGCTCATGAGGCTGGTGCAGCTACTGCAATCGTCAATGTAGGTGTGACACGTGCTGATGATTTTGTGCCCTTGAAAATCAATGCACGATTGGGTGAGGTATGGCTTGAAAAGTGATCTGGACTGGAAATTCTGAATACTGCAAGTTTACTAATTAGTACTTACTACCCCAATTTGAACAAACTGTTGCATTGTGCAGATATTGCCAAGAGTACTTGACATGGGATCCATCAGCGTCCCTGCTGTGTAA

Protein sequence

>MS.gene06369.t1

MSMNSFVFARKLLGTIITDIACLSSTAQSWNLAPKGGRFISFKRGARFVQTSCRISAPGTFPVNDGKAQTNVMRDKKVVPDADPPTTKDVNLLYDFFEKSTKLLVLTGAGISTECGIPDYRSPNGAYSSGFRPITHQEFLRSSRARRRYWARSYAGWRQFTAAQPSAAHCALAAFEKAGRIDFMVTQNVDRLHHRAGSCPLELHGTVYTVICIDCGHSLCRSLFQDQLKSLNPKWAEAIENLDHGSPGSDKSFGMKQRPDGDIEIDEKFWEEDFTIPTCQKCNGVLKPDVVFFGDNVPKERADMAMEASRSCDAFLVLGSSVMTMSAFRLVRAAHEAGAATAIVNVGVTRADDFVPLKINARLGEILPRVLDMGSISVPAV