Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06703.t1 | XP_024635205.1 | 91.5 | 674 | 30 | 5 | 1 | 658 | 1 | 663 | 0.00E+00 | 1257.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06703.t1 | Q9FNF2 | 69.5 | 600 | 164 | 5 | 71 | 657 | 57 | 650 | 3.5e-256 | 885.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06703.t1 | G7J7E9 | 91.5 | 669 | 32 | 5 | 1 | 658 | 1 | 655 | 0.0e+00 | 1248.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene06703 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene049173 | MS.gene06703 | 0.813017 | 3.17E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene06703 | 0.824921 | 6.21E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene06703 | 0.829533 | 4.88E-55 | -1.69E-46 |
| MS.gene049396 | MS.gene06703 | 0.806242 | 9.05E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene06703 | 0.818896 | 1.54E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene06703 | 0.800075 | 1.71E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene06703 | 0.812135 | 4.94E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene06703 | 0.812522 | 4.06E-51 | -1.69E-46 |
| MS.gene050338 | MS.gene06703 | -0.806702 | 7.23E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene06703 | 0.825556 | 4.39E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene06703 | 0.805442 | 1.33E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene06703 | 0.833574 | 4.93E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene06703 | 0.823563 | 1.30E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene06703 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene06703 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene06703 | 0.804865 | 1.76E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene06703 | 0.82234 | 2.50E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene06703 | 0.835418 | 1.70E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene06703 | 0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene06703 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene06703 | 0.804865 | 1.76E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene06703 | 0.868598 | 5.80E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene06703 | 0.824211 | 9.12E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene06703 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene06703 | 0.809042 | 2.30E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene06703 | 0.81237 | 4.39E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene06703 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene06703 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene06703 | 0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene06703 | 0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene06703 | 0.811154 | 8.07E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene06703 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene06703 | 0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene06703 | 0.82038 | 7.07E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene06703 | 0.846667 | 1.88E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene06703 | 0.8115 | 6.79E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene06703 | 0.838966 | 2.10E-57 | -1.69E-46 |
| MS.gene056898 | MS.gene06703 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene06703 | 0.828215 | 1.02E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene06703 | 0.81542 | 9.33E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene06703 | 0.825672 | 4.12E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene06703 | 0.846054 | 2.76E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene06703 | 0.849593 | 2.93E-60 | -1.69E-46 |
| MS.gene059667 | MS.gene06703 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene06703 | 0.820757 | 5.80E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene06703 | 0.804006 | 2.66E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene06703 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene06703 | 0.815119 | 1.09E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene06703 | 0.804995 | 1.65E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene06703 | 0.803833 | 2.89E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene06703 | 0.804357 | 2.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032008 | MS.gene06703 | PPI |
| MS.gene69259 | MS.gene06703 | PPI |
| MS.gene008088 | MS.gene06703 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06703.t1 | MTR_3g091570 | 91.480 | 669 | 32 | 5 | 1 | 658 | 1 | 655 | 0.0 | 1248 |
| MS.gene06703.t1 | MTR_3g091570 | 98.117 | 478 | 9 | 0 | 181 | 658 | 1 | 478 | 0.0 | 989 |
| MS.gene06703.t1 | MTR_6g012380 | 48.728 | 511 | 228 | 8 | 145 | 648 | 268 | 751 | 3.41e-158 | 474 |
| MS.gene06703.t1 | MTR_8g024340 | 40.150 | 533 | 271 | 15 | 137 | 648 | 83 | 588 | 1.38e-110 | 346 |
| MS.gene06703.t1 | MTR_1g078000 | 39.885 | 524 | 269 | 13 | 145 | 648 | 83 | 580 | 1.10e-105 | 333 |
| MS.gene06703.t1 | MTR_4g094595 | 31.631 | 509 | 314 | 13 | 146 | 647 | 493 | 974 | 1.69e-61 | 221 |
| MS.gene06703.t1 | MTR_2g023320 | 31.141 | 517 | 268 | 19 | 145 | 647 | 659 | 1101 | 2.01e-50 | 189 |
| MS.gene06703.t1 | MTR_2g023320 | 31.262 | 515 | 270 | 18 | 145 | 647 | 475 | 917 | 2.28e-50 | 189 |
| MS.gene06703.t1 | MTR_5g030600 | 24.144 | 584 | 342 | 22 | 85 | 638 | 145 | 657 | 2.98e-26 | 114 |
| MS.gene06703.t1 | MTR_7g037650 | 26.066 | 211 | 121 | 6 | 357 | 562 | 49 | 229 | 3.91e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06703.t1 | AT5G24300 | 69.384 | 601 | 165 | 5 | 71 | 658 | 57 | 651 | 0.0 | 861 |
| MS.gene06703.t1 | AT5G24300 | 69.384 | 601 | 165 | 5 | 71 | 658 | 57 | 651 | 0.0 | 861 |
| MS.gene06703.t1 | AT3G01180 | 46.667 | 570 | 259 | 11 | 94 | 648 | 246 | 785 | 1.25e-164 | 491 |
| MS.gene06703.t1 | AT1G32900 | 39.771 | 523 | 271 | 13 | 145 | 648 | 85 | 582 | 2.02e-102 | 325 |
| MS.gene06703.t1 | AT4G18240 | 33.006 | 509 | 307 | 13 | 146 | 647 | 544 | 1025 | 3.51e-66 | 235 |
| MS.gene06703.t1 | AT1G11720 | 31.721 | 517 | 264 | 19 | 145 | 647 | 647 | 1088 | 1.93e-52 | 196 |
| MS.gene06703.t1 | AT1G11720 | 31.189 | 513 | 272 | 17 | 145 | 647 | 595 | 1036 | 2.01e-52 | 195 |
Find 189 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTACATATTGCAATT+TGG | 0.109574 | 3.3:+76373543 | MS.gene06703:CDS |
| GCCACCTTGCGTTCTATTTC+CGG | 0.159502 | 3.3:+76369104 | MS.gene06703:CDS |
| TATTCTGCTGACGACCTTTC+TGG | 0.160892 | 3.3:+76374930 | MS.gene06703:CDS |
| CAGAAACTCAAGGGAATTTA+AGG | 0.192171 | 3.3:+76370517 | MS.gene06703:CDS |
| TCCAGAGAGATTGACGATTT+TGG | 0.194928 | 3.3:+76369206 | MS.gene06703:CDS |
| CGCTTGACTCCTCATGATTC+TGG | 0.202062 | 3.3:+76369245 | MS.gene06703:CDS |
| GCAATTACATATTGCAATTT+GGG | 0.229733 | 3.3:+76373544 | MS.gene06703:CDS |
| GAATCAAGTCAATACCTTTC+TGG | 0.244261 | 3.3:-76375201 | None:intergenic |
| AACAATGTTGCGAGTTACTA+TGG | 0.270513 | 3.3:-76370595 | None:intergenic |
| AGACAAGCACGGGACGTTTA+AGG | 0.276845 | 3.3:+76371050 | MS.gene06703:CDS |
| TCATATCTGCTTTCAGCAAT+AGG | 0.289960 | 3.3:-76376982 | None:intergenic |
| CCAAAGCAAAATACATTGAT+AGG | 0.294870 | 3.3:-76370792 | None:intergenic |
| GTAGGTTTCTTGAGCTTAGA+AGG | 0.299063 | 3.3:-76369074 | None:intergenic |
| CTCACGATTCTTACCGCAAT+TGG | 0.320425 | 3.3:+76369046 | MS.gene06703:CDS |
| CATAAGGATTCCCTGGTCTA+TGG | 0.321028 | 3.3:-76371026 | None:intergenic |
| GATACTGTATTGCAGACTTT+TGG | 0.333460 | 3.3:+76371602 | MS.gene06703:intron |
| CCTCCCAATGGAAGCACTAA+TGG | 0.338684 | 3.3:-76371217 | None:intergenic |
| TGGGATGGGTATTCCCTACT+TGG | 0.338774 | 3.3:+76373593 | MS.gene06703:CDS |
| CATAGACCAGGGAATCCTTA+TGG | 0.351574 | 3.3:+76371027 | MS.gene06703:CDS |
| CTCCCAATGGAAGCACTAAT+GGG | 0.365771 | 3.3:-76371216 | None:intergenic |
| ATACCAGTAGTTCATGAAAC+AGG | 0.367040 | 3.3:+76376207 | MS.gene06703:CDS |
| ATTGCCTTGCAGAAGGAGTT+AGG | 0.367443 | 3.3:+76375051 | MS.gene06703:CDS |
| AATCATTGAGTGGGCATTCA+TGG | 0.370383 | 3.3:+76376953 | MS.gene06703:CDS |
| TCTTCTGCATTCCCAATCTC+TGG | 0.372149 | 3.3:-76370558 | None:intergenic |
| TAAAGATAAATTTCGTGGTT+GGG | 0.379084 | 3.3:+76375921 | MS.gene06703:CDS |
| CATATCTGCTTTCAGCAATA+GGG | 0.379828 | 3.3:-76376981 | None:intergenic |
| GCCTATTCCTCGTTAATGAT+TGG | 0.380274 | 3.3:+76371260 | MS.gene06703:CDS |
| TCGTCCACATGGGGTATATA+AGG | 0.386432 | 3.3:+76371635 | MS.gene06703:CDS |
| CAGTTGTATGCAATGAGATA+TGG | 0.386711 | 3.3:+76376180 | MS.gene06703:CDS |
| CATATCTCATTGCATACAAC+TGG | 0.389447 | 3.3:-76376179 | None:intergenic |
| CCGCGACCCGCCAGTGCTAT+TGG | 0.397516 | 3.3:-76370684 | None:intergenic |
| TGATCATCTTCAAAGGAAAT+AGG | 0.398543 | 3.3:-76369164 | None:intergenic |
| AAATTGCAATATGTAATTGC+AGG | 0.399672 | 3.3:-76373541 | None:intergenic |
| GCAGTTATTCTATGAGATAC+TGG | 0.400477 | 3.3:-76375958 | None:intergenic |
| GCCTTCAGCATTGCATCCTT+CGG | 0.400496 | 3.3:-76376364 | None:intergenic |
| ACAACTACAGAAGGTGGATT+TGG | 0.400949 | 3.3:+76374149 | MS.gene06703:CDS |
| ACCAAAATCGTCAATCTCTC+TGG | 0.401513 | 3.3:-76369207 | None:intergenic |
| TGCATACACTGAAACTAAAC+TGG | 0.401674 | 3.3:-76371287 | None:intergenic |
| CTCATCCAGTCTTCATATAT+AGG | 0.407433 | 3.3:-76375880 | None:intergenic |
| GCATCTCTTCCTCCAGCAAA+TGG | 0.410114 | 3.3:-76376342 | None:intergenic |
| TTTCAGGTAATGCTTGGTTC+GGG | 0.416000 | 3.3:+76375853 | MS.gene06703:intron |
| ATAATGAACACAAGTCTTCA+TGG | 0.432708 | 3.3:+76376862 | MS.gene06703:CDS |
| TCAAGAATGGTATGGAGCGC+TGG | 0.437281 | 3.3:+76373573 | MS.gene06703:CDS |
| CCATTGGGAGGGTTCACTTA+CGG | 0.438789 | 3.3:+76371229 | MS.gene06703:CDS |
| CGGGACGTTTAAGGATAATC+AGG | 0.439356 | 3.3:+76371059 | MS.gene06703:CDS |
| CTGAAGAAGTGCGGGTATGA+TGG | 0.440710 | 3.3:-76368992 | None:intergenic |
| ATTCTGCTGACGACCTTTCT+GGG | 0.441080 | 3.3:+76374931 | MS.gene06703:CDS |
| GAACTCACCACTGGACAATC+AGG | 0.442879 | 3.3:-76375087 | None:intergenic |
| GCCAATCATTAACGAGGAAT+AGG | 0.443305 | 3.3:-76371261 | None:intergenic |
| CTTTATAAAGATAAATTTCG+TGG | 0.443734 | 3.3:+76375916 | MS.gene06703:CDS |
| GGTGGCCTTGCAGATGTTTG+TGG | 0.444403 | 3.3:+76370654 | MS.gene06703:CDS |
| ATAGGTCCGTCTGGTGAAGC+AGG | 0.444784 | 3.3:-76369146 | None:intergenic |
| GGGTCGCGGACACCGTGTTA+TGG | 0.449119 | 3.3:+76370698 | MS.gene06703:CDS |
| GATAAATTTCGTGGTTGGGT+TGG | 0.449687 | 3.3:+76375925 | MS.gene06703:CDS |
| GTGTTCATTATATGTTTGAA+TGG | 0.457516 | 3.3:-76376850 | None:intergenic |
| ATAAAGATAAATTTCGTGGT+TGG | 0.461080 | 3.3:+76375920 | MS.gene06703:CDS |
| AAGGTCGTCAGCAGAATAGT+TGG | 0.464673 | 3.3:-76374925 | None:intergenic |
| TGGTTCCTTGCCAATAGCAC+TGG | 0.466231 | 3.3:+76370674 | MS.gene06703:CDS |
| GCAGTACCATGTACGTATCT+AGG | 0.472827 | 3.3:-76370729 | None:intergenic |
| GCAATATGTTCATCAGATGA+TGG | 0.474624 | 3.3:-76374900 | None:intergenic |
| TTGATGAGAGTATTACATAC+AGG | 0.477545 | 3.3:+76370486 | MS.gene06703:CDS |
| CACCCTTCATTCCATAGACC+AGG | 0.479990 | 3.3:+76371015 | MS.gene06703:CDS |
| AGAAGGTGGATTTGGTCTAC+AGG | 0.480693 | 3.3:+76374157 | MS.gene06703:CDS |
| CCACAAGGCTCAAATGTTGA+TGG | 0.486246 | 3.3:-76376150 | None:intergenic |
| TATCGACCAGGGATCACAAA+TGG | 0.487988 | 3.3:+76374855 | MS.gene06703:intron |
| CAAAGCAAAATACATTGATA+GGG | 0.488034 | 3.3:-76370791 | None:intergenic |
| GGATGCAATGCTGAAGGCAC+GGG | 0.488330 | 3.3:+76376369 | MS.gene06703:CDS |
| TTCTGTAGTTGTTATCTCCC+AGG | 0.489591 | 3.3:-76374138 | None:intergenic |
| TGCTGACGACCTTTCTGGGA+AGG | 0.490242 | 3.3:+76374935 | MS.gene06703:CDS |
| CAACACCTTCTCTATACTCA+TGG | 0.490842 | 3.3:-76370839 | None:intergenic |
| TTCCCTGGTCTATGGAATGA+AGG | 0.492921 | 3.3:-76371018 | None:intergenic |
| AGTATAGAGAAGGTGTTGAC+TGG | 0.493004 | 3.3:+76370844 | MS.gene06703:CDS |
| AACTTGTAGATTGGATTCGT+TGG | 0.494340 | 3.3:+76375166 | MS.gene06703:intron |
| GCCCCATTAGTGCTTCCATT+GGG | 0.495903 | 3.3:+76371214 | MS.gene06703:CDS |
| TTGTCTCCATAAGGATTCCC+TGG | 0.496184 | 3.3:-76371033 | None:intergenic |
| CATTAGTGCTTCCATTGGGA+GGG | 0.499927 | 3.3:+76371218 | MS.gene06703:CDS |
| CCATTAGTGCTTCCATTGGG+AGG | 0.501841 | 3.3:+76371217 | MS.gene06703:CDS |
| TTTGAAGATGATCAAGATAG+AGG | 0.504728 | 3.3:+76369173 | MS.gene06703:CDS |
| TGGGGCTTCACATGCTGCAT+GGG | 0.506777 | 3.3:-76371197 | None:intergenic |
| CCAATAGCACTGGCGGGTCG+CGG | 0.510913 | 3.3:+76370684 | MS.gene06703:CDS |
| GAAATCCTATATATGAAGAC+TGG | 0.512634 | 3.3:+76375875 | MS.gene06703:CDS |
| GGAAGACTTGATTACCAGAA+AGG | 0.515076 | 3.3:+76375187 | MS.gene06703:CDS |
| GTCCCGTGCTTGTCTCCATA+AGG | 0.516878 | 3.3:-76371042 | None:intergenic |
| GACAAAGGAGAGCATGTTAG+TGG | 0.517549 | 3.3:+76376598 | MS.gene06703:CDS |
| TCAAAGGAAATAGGTCCGTC+TGG | 0.521679 | 3.3:-76369155 | None:intergenic |
| TTTGGAGGCGCTCAAGAAGT+TGG | 0.523145 | 3.3:+76370810 | MS.gene06703:CDS |
| ACATCGTCTTGCATAAGCTC+TGG | 0.524359 | 3.3:-76375235 | None:intergenic |
| GGAAGCACCGTCAGTGTCAC+CGG | 0.524701 | 3.3:-76369123 | None:intergenic |
| GAGAGATTACACCTGGGAAA+AGG | 0.525113 | 3.3:+76376911 | MS.gene06703:CDS |
| CAAAATCAACCTTCCCAGAA+AGG | 0.526917 | 3.3:-76374944 | None:intergenic |
| TGGAATTGATGTTACTGAAT+GGG | 0.528155 | 3.3:+76374875 | MS.gene06703:CDS |
| ATGGGGCTTCACATGCTGCA+TGG | 0.529447 | 3.3:-76371198 | None:intergenic |
| ATGGAATTGATGTTACTGAA+TGG | 0.529859 | 3.3:+76374874 | MS.gene06703:CDS |
| AGGTATTGACTTGATTCGCC+AGG | 0.532994 | 3.3:+76375207 | MS.gene06703:CDS |
| GCTTCCCCTGCTTCACCAGA+CGG | 0.535866 | 3.3:+76369140 | MS.gene06703:CDS |
| GTATCTCATAGAATAACTGC+AGG | 0.537384 | 3.3:+76375961 | MS.gene06703:CDS |
| AGCCCCATTAGTGCTTCCAT+TGG | 0.538320 | 3.3:+76371213 | MS.gene06703:CDS |
| CAATTACATATTGCAATTTG+GGG | 0.539126 | 3.3:+76373545 | MS.gene06703:CDS |
| TTGGTATGAGAAGGTCGAGT+TGG | 0.539638 | 3.3:-76369017 | None:intergenic |
| AGGCCACCAGTCTTAGAATA+CGG | 0.539910 | 3.3:-76370639 | None:intergenic |
| CATGTGTCCTCGCCCAAGTA+GGG | 0.540027 | 3.3:-76373606 | None:intergenic |
| AATGGTATGGAGCGCTGGGA+TGG | 0.541131 | 3.3:+76373578 | MS.gene06703:CDS |
| ATTTGGGGCTGCCTCAAGAA+TGG | 0.541394 | 3.3:+76373560 | MS.gene06703:CDS |
| GCATAAGCTCTGGAATTGCC+TGG | 0.541731 | 3.3:-76375225 | None:intergenic |
| TTCCTTGCCAATAGCACTGG+CGG | 0.544415 | 3.3:+76370677 | MS.gene06703:CDS |
| GCATGTGTCCTCGCCCAAGT+AGG | 0.545911 | 3.3:-76373607 | None:intergenic |
| CAAGAATGGTATGGAGCGCT+GGG | 0.546441 | 3.3:+76373574 | MS.gene06703:CDS |
| AGGATGCAATGCTGAAGGCA+CGG | 0.547103 | 3.3:+76376368 | MS.gene06703:CDS |
| ATGGTATGGAGCGCTGGGAT+GGG | 0.548093 | 3.3:+76373579 | MS.gene06703:CDS |
| CCATCAACATTTGAGCCTTG+TGG | 0.553290 | 3.3:+76376150 | MS.gene06703:CDS |
| GCATCAAAGTATCGTCCACA+TGG | 0.557906 | 3.3:+76371624 | MS.gene06703:CDS |
| GCTGCACCGTATTCTAAGAC+TGG | 0.565136 | 3.3:+76370633 | MS.gene06703:CDS |
| ATCCTTATGGAGACAAGCAC+GGG | 0.566822 | 3.3:+76371040 | MS.gene06703:CDS |
| TCCTTGCCAATAGCACTGGC+GGG | 0.566924 | 3.3:+76370678 | MS.gene06703:CDS |
| TGGGAATGCAGAAGATGAGA+AGG | 0.567156 | 3.3:+76370566 | MS.gene06703:CDS |
| ATGTAAAATTGCCTTGCAGA+AGG | 0.568730 | 3.3:+76375044 | MS.gene06703:CDS |
| AGTTGGAGCTGAAGAAGTGC+GGG | 0.569588 | 3.3:-76369000 | None:intergenic |
| TCTATCTTGATCATCTTCAA+AGG | 0.574748 | 3.3:-76369171 | None:intergenic |
| GCGCCATTGTTACTGCTGAT+CGG | 0.576090 | 3.3:+76373665 | MS.gene06703:CDS |
| TAGGTTTCTTGAGCTTAGAA+GGG | 0.578297 | 3.3:-76369073 | None:intergenic |
| TAAGAATCGTGAGGAACTGT+TGG | 0.578445 | 3.3:-76369036 | None:intergenic |
| GTATGACGAGAGATTACACC+TGG | 0.578921 | 3.3:+76376904 | MS.gene06703:CDS |
| ACTGGACAATCAGGTCGCAC+TGG | 0.579346 | 3.3:-76375078 | None:intergenic |
| AGGACACATGCTCTTGACAC+AGG | 0.582246 | 3.3:+76373619 | MS.gene06703:CDS |
| TCCCTGGTCTATGGAATGAA+GGG | 0.587551 | 3.3:-76371017 | None:intergenic |
| TAATGAACACAAGTCTTCAT+GGG | 0.588417 | 3.3:+76376863 | MS.gene06703:CDS |
| ACCCGCCAGTGCTATTGGCA+AGG | 0.588595 | 3.3:-76370679 | None:intergenic |
| GAACACAAGTCTTCATGGGA+GGG | 0.590428 | 3.3:+76376867 | MS.gene06703:CDS |
| GATTCACAATATTGCACACC+AGG | 0.590518 | 3.3:+76371677 | MS.gene06703:CDS |
| GAGGAACTGTTGGTATGAGA+AGG | 0.594475 | 3.3:-76369026 | None:intergenic |
| TAGGTCCGTCTGGTGAAGCA+GGG | 0.596649 | 3.3:-76369145 | None:intergenic |
| CAATATGTTCATCAGATGAT+GGG | 0.596741 | 3.3:-76374899 | None:intergenic |
| GGGCTGCCTCAAGAATGGTA+TGG | 0.598454 | 3.3:+76373565 | MS.gene06703:CDS |
| AATCCTTATGGAGACAAGCA+CGG | 0.600419 | 3.3:+76371039 | MS.gene06703:CDS |
| TCTATTTCCGGTGACACTGA+CGG | 0.601830 | 3.3:+76369116 | MS.gene06703:CDS |
| GGGTATTCCCTACTTGGGCG+AGG | 0.603588 | 3.3:+76373599 | MS.gene06703:CDS |
| CCGTAAGTGAACCCTCCCAA+TGG | 0.604219 | 3.3:-76371229 | None:intergenic |
| ATCTGCTTTCAGCAATAGGG+TGG | 0.605343 | 3.3:-76376978 | None:intergenic |
| GCCGAAGGATGCAATGCTGA+AGG | 0.605754 | 3.3:+76376363 | MS.gene06703:CDS |
| AAAGCAAAATACATTGATAG+GGG | 0.606682 | 3.3:-76370790 | None:intergenic |
| GGGACCACTGCAGAAACTCA+AGG | 0.606966 | 3.3:+76370507 | MS.gene06703:CDS |
| TACCAGTAGTTCATGAAACA+GGG | 0.607738 | 3.3:+76376208 | MS.gene06703:CDS |
| ATTCCCTTGAGTTTCTGCAG+TGG | 0.609463 | 3.3:-76370511 | None:intergenic |
| AATGATTTGCTCGTATTGAG+CGG | 0.611048 | 3.3:-76376937 | None:intergenic |
| ATACGAGCAAATCATTGAGT+GGG | 0.612574 | 3.3:+76376944 | MS.gene06703:CDS |
| GAGATAACAACTACAGAAGG+TGG | 0.613804 | 3.3:+76374143 | MS.gene06703:CDS |
| GTCACCGGAAATAGAACGCA+AGG | 0.614436 | 3.3:-76369108 | None:intergenic |
| AATACGAGCAAATCATTGAG+TGG | 0.616706 | 3.3:+76376943 | MS.gene06703:CDS |
| CATCAAAGTATCGTCCACAT+GGG | 0.622300 | 3.3:+76371625 | MS.gene06703:CDS |
| TCGGATAGTAACAGTAAGCA+AGG | 0.627715 | 3.3:+76373684 | MS.gene06703:CDS |
| GGGATGGGTATTCCCTACTT+GGG | 0.627869 | 3.3:+76373594 | MS.gene06703:CDS |
| GGACCACTGCAGAAACTCAA+GGG | 0.631842 | 3.3:+76370508 | MS.gene06703:CDS |
| AACATGCTCTCCTTTGTCAG+TGG | 0.633844 | 3.3:-76376593 | None:intergenic |
| TATCCGATCAGCAGTAACAA+TGG | 0.634823 | 3.3:-76373668 | None:intergenic |
| GAGTTGGAGCTGAAGAAGTG+CGG | 0.635111 | 3.3:-76369001 | None:intergenic |
| TGGGAGATAACAACTACAGA+AGG | 0.635680 | 3.3:+76374140 | MS.gene06703:CDS |
| TGATGAGAGTATTACATACA+GGG | 0.636256 | 3.3:+76370487 | MS.gene06703:CDS |
| ATCTCTCCTAGATACGTACA+TGG | 0.636965 | 3.3:+76370723 | MS.gene06703:CDS |
| AGGTCCGTCTGGTGAAGCAG+GGG | 0.637766 | 3.3:-76369144 | None:intergenic |
| AGCGCTCCATACCATTCTTG+AGG | 0.642449 | 3.3:-76373571 | None:intergenic |
| GTATAGAGAAGGTGTTGACT+GGG | 0.646125 | 3.3:+76370845 | MS.gene06703:CDS |
| TACAACTGGTTTAGTCCACA+AGG | 0.649431 | 3.3:-76376165 | None:intergenic |
| TGAACACAAGTCTTCATGGG+AGG | 0.650187 | 3.3:+76376866 | MS.gene06703:CDS |
| ATCATGAGGAGTCAAGCGAA+AGG | 0.653378 | 3.3:-76369240 | None:intergenic |
| TCCCAATGGAAGCACTAATG+GGG | 0.663095 | 3.3:-76371215 | None:intergenic |
| GCTGGAGGAAGAGATGCCGA+AGG | 0.665363 | 3.3:+76376348 | MS.gene06703:CDS |
| GCACCGTATTCTAAGACTGG+TGG | 0.666033 | 3.3:+76370636 | MS.gene06703:CDS |
| AAGACCTAACTCCTTCTGCA+AGG | 0.666845 | 3.3:-76375055 | None:intergenic |
| GATTTGCTCGTATTGAGCGG+CGG | 0.669443 | 3.3:-76376934 | None:intergenic |
| ACCCTTCATTCCATAGACCA+GGG | 0.674753 | 3.3:+76371016 | MS.gene06703:CDS |
| AGGAACCACAAACATCTGCA+AGG | 0.675664 | 3.3:-76370659 | None:intergenic |
| ACTAGAAAACTTACTATCAG+CGG | 0.677717 | 3.3:-76370751 | None:intergenic |
| ATCAAAGTATCGTCCACATG+GGG | 0.678467 | 3.3:+76371626 | MS.gene06703:CDS |
| ACCAGTAGTTCATGAAACAG+GGG | 0.682127 | 3.3:+76376209 | MS.gene06703:CDS |
| TTAGAAGGGAAAGCCAATTG+CGG | 0.684978 | 3.3:-76369059 | None:intergenic |
| AGATAGATACCAGAATCATG+AGG | 0.686227 | 3.3:-76369254 | None:intergenic |
| GTATGATGGAGAAAGAGACG+AGG | 0.689249 | 3.3:-76368978 | None:intergenic |
| TATGATGGAGAAAGAGACGA+GGG | 0.695047 | 3.3:-76368977 | None:intergenic |
| GCATCCTTATATACCCCATG+TGG | 0.695337 | 3.3:-76371639 | None:intergenic |
| GATGCAATGCTGAAGGCACG+GGG | 0.696578 | 3.3:+76376370 | MS.gene06703:CDS |
| TATCTCATAGAATAACTGCA+GGG | 0.703392 | 3.3:+76375962 | MS.gene06703:CDS |
| CCAGTAGTTCATGAAACAGG+GGG | 0.705069 | 3.3:+76376210 | MS.gene06703:CDS |
| ACCGGAAATAGAACGCAAGG+TGG | 0.720708 | 3.3:-76369105 | None:intergenic |
| AGTGCGACCTGATTGTCCAG+TGG | 0.724308 | 3.3:+76375080 | MS.gene06703:CDS |
| TGGCATGCCAATCATTAACG+AGG | 0.731653 | 3.3:-76371267 | None:intergenic |
| TAGGAGAGATAACCATAACA+CGG | 0.743995 | 3.3:-76370710 | None:intergenic |
| CAATTGCGGTAAGAATCGTG+AGG | 0.746620 | 3.3:-76369045 | None:intergenic |
| TATGACGAGAGATTACACCT+GGG | 0.773744 | 3.3:+76376905 | MS.gene06703:CDS |
| GATAGAAAGAGTATTCTGAG+CGG | 0.785538 | 3.3:+76374191 | MS.gene06703:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76368960 | 76376992 | 76368960 | ID=MS.gene06703 |
| chr3.3 | mRNA | 76368960 | 76376992 | 76368960 | ID=MS.gene06703.t1;Parent=MS.gene06703 |
| chr3.3 | exon | 76368960 | 76369266 | 76368960 | ID=MS.gene06703.t1.exon1;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76368960 | 76369266 | 76368960 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76370484 | 76370866 | 76370484 | ID=MS.gene06703.t1.exon2;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76370484 | 76370866 | 76370484 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76371003 | 76371080 | 76371003 | ID=MS.gene06703.t1.exon3;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76371003 | 76371080 | 76371003 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76371178 | 76371302 | 76371178 | ID=MS.gene06703.t1.exon4;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76371178 | 76371302 | 76371178 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76371617 | 76371698 | 76371617 | ID=MS.gene06703.t1.exon5;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76371617 | 76371698 | 76371617 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76373532 | 76373705 | 76373532 | ID=MS.gene06703.t1.exon6;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76373532 | 76373705 | 76373532 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76374131 | 76374212 | 76374131 | ID=MS.gene06703.t1.exon7;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76374131 | 76374212 | 76374131 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76374865 | 76374956 | 76374865 | ID=MS.gene06703.t1.exon8;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76374865 | 76374956 | 76374865 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76375039 | 76375101 | 76375039 | ID=MS.gene06703.t1.exon9;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76375039 | 76375101 | 76375039 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76375175 | 76375264 | 76375175 | ID=MS.gene06703.t1.exon10;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76375175 | 76375264 | 76375175 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76375859 | 76375983 | 76375859 | ID=MS.gene06703.t1.exon11;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76375859 | 76375983 | 76375859 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76376131 | 76376239 | 76376131 | ID=MS.gene06703.t1.exon12;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76376131 | 76376239 | 76376131 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76376321 | 76376391 | 76376321 | ID=MS.gene06703.t1.exon13;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76376321 | 76376391 | 76376321 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76376580 | 76376619 | 76376580 | ID=MS.gene06703.t1.exon14;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76376580 | 76376619 | 76376580 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| chr3.3 | exon | 76376837 | 76376992 | 76376837 | ID=MS.gene06703.t1.exon15;Parent=MS.gene06703.t1 |
| chr3.3 | CDS | 76376837 | 76376992 | 76376837 | ID=cds.MS.gene06703.t1;Parent=MS.gene06703.t1 |
| Gene Sequence |
| Protein sequence |
