Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060981.t1 | XP_013464447.1 | 96.9 | 356 | 9 | 1 | 1 | 354 | 66 | 421 | 3.80E-184 | 654.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060981.t1 | Q76FS5 | 78.4 | 334 | 72 | 0 | 20 | 353 | 83 | 416 | 2.3e-145 | 516.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060981.t1 | A0A072V9K7 | 96.9 | 356 | 9 | 1 | 1 | 354 | 66 | 421 | 2.8e-184 | 654.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene060981 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene060981 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene060981 | 0.801068 | 1.07E-48 | -1.69E-46 |
| MS.gene050444 | MS.gene060981 | 0.831133 | 1.98E-55 | -1.69E-46 |
| MS.gene053384 | MS.gene060981 | 0.810941 | 8.97E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene060981 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene060981 | 0.836419 | 9.46E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene060981 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene060981 | 0.802537 | 5.35E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene060981 | 0.81862 | 1.78E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene060981 | 0.818869 | 1.57E-52 | -1.69E-46 |
| MS.gene056719 | MS.gene060981 | 0.814816 | 1.27E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene060981 | 0.821634 | 3.64E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene060981 | 0.804818 | 1.80E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene060981 | 0.821375 | 4.17E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene060981 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene060832 | MS.gene060981 | 0.812407 | 4.31E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene061041 | 0.824736 | 6.87E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene061606 | 0.836967 | 6.86E-57 | -1.69E-46 |
| MS.gene060981 | MS.gene062145 | 0.822564 | 2.21E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene062930 | 0.816625 | 5.02E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene063206 | 0.823036 | 1.72E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene063420 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene063442 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene063563 | 0.812724 | 3.67E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene064818 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene064886 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene06490 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene065215 | 0.810764 | 9.80E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene065381 | 0.811632 | 6.35E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene065572 | 0.805097 | 1.57E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene066263 | 0.811441 | 6.99E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene06703 | 0.804995 | 1.65E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene067048 | 0.806367 | 8.51E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene067524 | 0.802123 | 6.51E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene067696 | 0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene067922 | 0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene068746 | 0.806059 | 9.88E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene069167 | 0.831294 | 1.81E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene06919 | 0.841613 | 4.27E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene069302 | 0.814982 | 1.17E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene06973 | 0.801865 | 7.36E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene069955 | 0.806785 | 6.95E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene070206 | 0.816363 | 5.75E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene070803 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene07082 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene070979 | 0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene071525 | 0.811667 | 6.24E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene071526 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene071527 | 0.817675 | 2.92E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene072048 | 0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene073806 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene073963 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene074249 | 0.832731 | 8.00E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene07438 | 0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene08083 | 0.831469 | 1.64E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene08323 | 0.803869 | 2.84E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene09725 | 0.811703 | 6.13E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene09727 | 0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene09877 | 0.809342 | 1.98E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene09923 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene20374 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene21013 | 0.807095 | 5.98E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene21534 | 0.807416 | 5.11E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene22221 | 0.812882 | 3.39E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene23914 | 0.810072 | 1.38E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene24674 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene24726 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene25782 | 0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene25929 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene26111 | 0.81052 | 1.11E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene28167 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene31046 | 0.819043 | 1.43E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene32050 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene32274 | 0.802012 | 6.87E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene32990 | 0.80929 | 2.04E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene33501 | 0.824643 | 7.22E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene33534 | 0.802601 | 5.19E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene34281 | 0.817053 | 4.02E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene34389 | 0.80659 | 7.64E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene34409 | 0.808751 | 2.66E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene37681 | 0.804828 | 1.79E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene37695 | 0.801491 | 8.78E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene43039 | 0.843344 | 1.48E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene43067 | 0.829689 | 4.47E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene46979 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene48355 | 0.815829 | 7.57E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene48662 | 0.800346 | 1.50E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene49365 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene49500 | 0.82701 | 1.98E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene50561 | 0.841914 | 3.56E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene50577 | 0.833693 | 4.61E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene50731 | 0.810967 | 8.86E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene50857 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene50880 | 0.824575 | 7.49E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene51599 | 0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene51844 | 0.80419 | 2.43E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene52786 | 0.842971 | 1.87E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene53525 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene55865 | 0.817892 | 2.60E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene56599 | 0.822496 | 2.30E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene56776 | 0.824322 | 8.59E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene58011 | 0.81768 | 2.91E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene58153 | 0.802025 | 6.82E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene59427 | 0.807766 | 4.31E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene60632 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene61157 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene62503 | 0.805313 | 1.42E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene63459 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene63839 | 0.843359 | 1.47E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene63955 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene64209 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene64678 | 0.824183 | 9.27E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene66434 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene67886 | 0.809015 | 2.33E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene69736 | 0.829187 | 5.92E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene70087 | 0.802723 | 4.90E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene70297 | 0.829492 | 4.99E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene70301 | 0.823703 | 1.20E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene70702 | 0.8032 | 3.90E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene70807 | 0.822675 | 2.09E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene71078 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene71475 | 0.815706 | 8.06E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene71476 | 0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene74498 | 0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene76905 | 0.841106 | 5.81E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene76907 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene78724 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene79726 | 0.817414 | 3.34E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene80141 | 0.83056 | 2.74E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene80968 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene80969 | 0.823484 | 1.35E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene80970 | 0.816741 | 4.73E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene81767 | 0.81348 | 2.51E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene82543 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene83615 | 0.805834 | 1.10E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene85591 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene85923 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene86216 | 0.800889 | 1.17E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene87666 | 0.808841 | 2.54E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene89744 | 0.83654 | 8.81E-57 | -1.69E-46 |
| MS.gene060981 | MS.gene90134 | 0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene90512 | 0.828863 | 7.10E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene92154 | 0.816166 | 6.36E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene92218 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene060981 | MS.gene95695 | 0.814735 | 1.32E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene95988 | 0.810956 | 8.91E-51 | -1.69E-46 |
| MS.gene060981 | MS.gene96333 | 0.832001 | 1.21E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene98218 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene060981 | MS.gene99197 | 0.851618 | 7.89E-61 | -1.69E-46 |
| MS.gene060981 | MS.gene99767 | 0.805587 | 1.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060982 | MS.gene060981 | PPI |
| MS.gene060981 | MS.gene041919 | PPI |
| MS.gene011755 | MS.gene060981 | PPI |
| MS.gene039280 | MS.gene060981 | PPI |
| MS.gene060981 | MS.gene56598 | PPI |
| MS.gene060981 | MS.gene039281 | PPI |
| MS.gene060981 | MS.gene44511 | PPI |
| MS.gene060981 | MS.gene56599 | PPI |
| MS.gene060981 | MS.gene90447 | PPI |
| MS.gene060981 | MS.gene95988 | PPI |
| MS.gene56598 | MS.gene060981 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060981.t1 | MTR_2g072470 | 96.910 | 356 | 9 | 1 | 1 | 354 | 66 | 421 | 0.0 | 697 |
| MS.gene060981.t1 | MTR_4g095055 | 40.895 | 313 | 171 | 3 | 36 | 334 | 79 | 391 | 9.34e-78 | 244 |
| MS.gene060981.t1 | MTR_4g095055 | 41.176 | 221 | 116 | 3 | 36 | 242 | 79 | 299 | 1.12e-46 | 165 |
| MS.gene060981.t1 | MTR_4g095055 | 39.583 | 96 | 58 | 0 | 239 | 334 | 369 | 464 | 2.90e-17 | 83.2 |
| MS.gene060981.t1 | MTR_8g078070 | 36.546 | 249 | 138 | 7 | 46 | 281 | 92 | 333 | 6.64e-34 | 129 |
| MS.gene060981.t1 | MTR_5g019460 | 36.220 | 254 | 144 | 6 | 46 | 287 | 91 | 338 | 2.60e-33 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060981.t1 | AT1G17050 | 78.443 | 334 | 72 | 0 | 20 | 353 | 83 | 416 | 0.0 | 546 |
| MS.gene060981.t1 | AT1G78510 | 78.443 | 334 | 72 | 0 | 20 | 353 | 72 | 405 | 0.0 | 538 |
| MS.gene060981.t1 | AT1G78510 | 78.443 | 334 | 72 | 0 | 20 | 353 | 33 | 366 | 0.0 | 538 |
| MS.gene060981.t1 | AT2G34630 | 39.809 | 314 | 176 | 3 | 36 | 336 | 85 | 398 | 4.13e-74 | 236 |
| MS.gene060981.t1 | AT2G34630 | 40.067 | 297 | 165 | 3 | 53 | 336 | 1 | 297 | 4.48e-71 | 224 |
| MS.gene060981.t1 | AT4G36810 | 40.392 | 255 | 128 | 9 | 44 | 281 | 85 | 332 | 2.72e-37 | 138 |
| MS.gene060981.t1 | AT2G18620 | 39.098 | 266 | 141 | 9 | 44 | 295 | 64 | 322 | 2.51e-35 | 132 |
| MS.gene060981.t1 | AT2G18640 | 37.200 | 250 | 139 | 7 | 44 | 281 | 90 | 333 | 1.75e-33 | 127 |
| MS.gene060981.t1 | AT3G14510 | 38.494 | 239 | 127 | 6 | 71 | 295 | 27 | 259 | 3.85e-32 | 122 |
| MS.gene060981.t1 | AT3G20160 | 35.039 | 254 | 142 | 8 | 44 | 281 | 59 | 305 | 1.40e-30 | 119 |
| MS.gene060981.t1 | AT2G23800 | 35.060 | 251 | 143 | 9 | 44 | 281 | 94 | 337 | 1.30e-27 | 112 |
| MS.gene060981.t1 | AT3G32040 | 35.206 | 267 | 152 | 7 | 44 | 295 | 75 | 335 | 1.50e-27 | 111 |
| MS.gene060981.t1 | AT3G29430 | 37.238 | 239 | 130 | 6 | 71 | 295 | 100 | 332 | 3.38e-26 | 107 |
| MS.gene060981.t1 | AT3G14550 | 35.206 | 267 | 152 | 8 | 44 | 295 | 75 | 335 | 5.37e-26 | 107 |
| MS.gene060981.t1 | AT3G14550 | 35.206 | 267 | 152 | 8 | 44 | 295 | 75 | 335 | 5.37e-26 | 107 |
| MS.gene060981.t1 | AT3G14550 | 35.206 | 267 | 152 | 8 | 44 | 295 | 75 | 335 | 5.37e-26 | 107 |
| MS.gene060981.t1 | AT3G14530 | 37.238 | 239 | 130 | 7 | 71 | 295 | 103 | 335 | 1.32e-25 | 106 |
| MS.gene060981.t1 | AT3G20160 | 32.794 | 247 | 129 | 8 | 44 | 281 | 59 | 277 | 1.41e-25 | 105 |
| MS.gene060981.t1 | AT1G49530 | 31.556 | 225 | 132 | 6 | 72 | 280 | 78 | 296 | 3.39e-21 | 93.2 |
Find 61 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACCTATTTGGTGAAAT+AGG | 0.152420 | 2.3:-23956810 | None:intergenic |
| ACTACTTCAAACAACCTATT+TGG | 0.233446 | 2.3:-23956819 | None:intergenic |
| ACAACCTATTTGGTGAAATA+GGG | 0.248193 | 2.3:-23956809 | None:intergenic |
| GAGACCGGCTCTTGTGTTCT+TGG | 0.257479 | 2.3:+23957387 | MS.gene060981:CDS |
| TTCTCCAACGCGAAAATTAC+AGG | 0.258160 | 2.3:-23958872 | None:intergenic |
| TTGATTGCTGCCAGCGTAAA+AGG | 0.270096 | 2.3:+23958677 | MS.gene060981:CDS |
| GAAACTGTTCATCAAATGTT+TGG | 0.338601 | 2.3:+23958145 | MS.gene060981:CDS |
| CCAAGTTGTCGACGACATAT+TGG | 0.347498 | 2.3:+23958778 | MS.gene060981:CDS |
| CAACCCCTATTTCACCAAAT+AGG | 0.381053 | 2.3:+23956805 | MS.gene060981:CDS |
| TCAATGATATCCCTCAATTT+CGG | 0.393056 | 2.3:-23958899 | None:intergenic |
| TTTGGTGAAATAGGGGTTGC+TGG | 0.395241 | 2.3:-23956801 | None:intergenic |
| CTCTTGTGTTCTTGGTGTCA+AGG | 0.413478 | 2.3:+23957395 | MS.gene060981:CDS |
| AGGAGCTGTCAGGTTACCTT+TGG | 0.418601 | 2.3:-23958852 | None:intergenic |
| CCAATATGTCGTCGACAACT+TGG | 0.427937 | 2.3:-23958778 | None:intergenic |
| GAGTCTGAATTTAGCGAGAT+TGG | 0.432083 | 2.3:+23958920 | MS.gene060981:CDS |
| TCTGAGAAAATGTTCGAATA+CGG | 0.439542 | 2.3:+23958734 | MS.gene060981:CDS |
| GCAATTAAAGACCTTGCAAA+AGG | 0.452757 | 2.3:+23956759 | MS.gene060981:CDS |
| TCAGCTGCAGATATTAAAAC+TGG | 0.453325 | 2.3:-23957334 | None:intergenic |
| ATCAAGTTGGTTAAGAGTTG+TGG | 0.459670 | 2.3:+23958959 | MS.gene060981:CDS |
| AGCTTGCTTTATTTCTCCAC+TGG | 0.468481 | 2.3:-23958585 | None:intergenic |
| TCAAGTTGGTTAAGAGTTGT+GGG | 0.479565 | 2.3:+23958960 | MS.gene060981:CDS |
| TCTTGTGTTCTTGGTGTCAA+GGG | 0.480305 | 2.3:+23957396 | MS.gene060981:CDS |
| TTGGCGAGGTCCGTGCATGC+AGG | 0.492317 | 2.3:-23958833 | None:intergenic |
| ACAAGAGTGGCAGTGCTGGC+TGG | 0.494391 | 2.3:+23958169 | MS.gene060981:CDS |
| ACGCAATCGGCAGAGCAACT+TGG | 0.497280 | 2.3:+23958806 | MS.gene060981:CDS |
| CGAAAATTACAGGAGCTGTC+AGG | 0.497944 | 2.3:-23958862 | None:intergenic |
| TTCGAATACGGGAAGAATCT+CGG | 0.498347 | 2.3:+23958746 | MS.gene060981:CDS |
| CTGAGAAAATGTTCGAATAC+GGG | 0.499271 | 2.3:+23958735 | MS.gene060981:CDS |
| TGGAACAAGAGTGGCAGTGC+TGG | 0.503897 | 2.3:+23958165 | MS.gene060981:CDS |
| TGGAGAAAGAACCGAAATTG+AGG | 0.505243 | 2.3:+23958888 | MS.gene060981:CDS |
| ATTGAGTGTTTGAAGATCAT+CGG | 0.505570 | 2.3:-23956844 | None:intergenic |
| CATATTGGATTTCACGCAAT+CGG | 0.510526 | 2.3:+23958793 | MS.gene060981:CDS |
| TCTTTAGTGCTGGTGGGAAG+AGG | 0.511599 | 2.3:+23957362 | MS.gene060981:CDS |
| TCATGTTTGCACAATCATCA+TGG | 0.521316 | 2.3:+23958197 | MS.gene060981:CDS |
| GCTAAACGATACACACTTGG+AGG | 0.522408 | 2.3:-23959052 | None:intergenic |
| GGATGCTCTTGATAGATTGT+AGG | 0.526067 | 2.3:+23957301 | MS.gene060981:intron |
| AGTCATTAAACTTATCAGCC+AGG | 0.530858 | 2.3:+23958246 | MS.gene060981:CDS |
| GGAGAAAGAACCGAAATTGA+GGG | 0.533563 | 2.3:+23958889 | MS.gene060981:CDS |
| CAACCTATTTGGTGAAATAG+GGG | 0.541722 | 2.3:-23956808 | None:intergenic |
| GATGAGAGTGACATGAGAAG+AGG | 0.542931 | 2.3:+23957659 | MS.gene060981:CDS |
| ACTTGGAAAGCCTGCATGCA+CGG | 0.542947 | 2.3:+23958823 | MS.gene060981:CDS |
| GCTGAGCAGATCTTTAGTGC+TGG | 0.564731 | 2.3:+23957352 | MS.gene060981:CDS |
| GACACCAAGAACACAAGAGC+CGG | 0.565484 | 2.3:-23957391 | None:intergenic |
| AGGGCGACCGCAGAGCTACA+TGG | 0.569025 | 2.3:+23957415 | MS.gene060981:CDS |
| GAGCAGATCTTTAGTGCTGG+TGG | 0.569958 | 2.3:+23957355 | MS.gene060981:CDS |
| TCGTTTAGCTCTTGAGGACA+TGG | 0.571941 | 2.3:+23959066 | MS.gene060981:CDS |
| AGCAGATCTTTAGTGCTGGT+GGG | 0.574274 | 2.3:+23957356 | MS.gene060981:CDS |
| TGGTGACATATAATCTTCAA+AGG | 0.582035 | 2.3:+23959086 | MS.gene060981:CDS |
| AATCGAAAGAGCACAAGAGT+TGG | 0.582560 | 2.3:+23958985 | MS.gene060981:CDS |
| GCATGCACGGACCTCGCCAA+AGG | 0.584554 | 2.3:+23958836 | MS.gene060981:CDS |
| TGTGTATCGTTTAGCTCTTG+AGG | 0.586196 | 2.3:+23959060 | MS.gene060981:CDS |
| AAGTTGGTTAAGAGTTGTGG+GGG | 0.591345 | 2.3:+23958962 | MS.gene060981:CDS |
| TATGTCGTCGACAACTTGGA+AGG | 0.598026 | 2.3:-23958774 | None:intergenic |
| TCAAATGTTTGGAACAAGAG+TGG | 0.606800 | 2.3:+23958156 | MS.gene060981:CDS |
| TGGTGGGAAGAGGATGAGAC+CGG | 0.611153 | 2.3:+23957372 | MS.gene060981:CDS |
| CTGTCAGGTTACCTTTGGCG+AGG | 0.615618 | 2.3:-23958847 | None:intergenic |
| TCTTGACGAAGCGATCAAGT+TGG | 0.618929 | 2.3:+23958946 | MS.gene060981:CDS |
| AGAGCTAAACGATACACACT+TGG | 0.629738 | 2.3:-23959055 | None:intergenic |
| CAAGTTGGTTAAGAGTTGTG+GGG | 0.643343 | 2.3:+23958961 | MS.gene060981:CDS |
| CTCAAGGCCATGTAGCTCTG+CGG | 0.684430 | 2.3:-23957422 | None:intergenic |
| TACGCTGGCAGCAATCAAGG+AGG | 0.714158 | 2.3:-23958672 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAAAAAATCATTATTT+CGG | + | chr2.3:23958459-23958478 | MS.gene060981:intron | 10.0% |
| !! | TGATCAAATAAATTATAACA+TGG | - | chr2.3:23957814-23957833 | None:intergenic | 15.0% |
| !!! | TTTTAAAAGTTGTATAATGA+TGG | - | chr2.3:23958278-23958297 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTCAAATTAGTAT+CGG | + | chr2.3:23956636-23956655 | MS.gene060981:intron | 15.0% |
| !! | AAGTAATTGATATCCATTTA+AGG | - | chr2.3:23958396-23958415 | None:intergenic | 20.0% |
| !! | AGTAATTGATATCCATTTAA+GGG | - | chr2.3:23958395-23958414 | None:intergenic | 20.0% |
| !! | ATTTCTAAATAAGTATCACT+AGG | - | chr2.3:23957688-23957707 | None:intergenic | 20.0% |
| !! | GTGATGTCAAAAATATTAAA+CGG | - | chr2.3:23957713-23957732 | None:intergenic | 20.0% |
| !! | TAAAAACAATGTTTAGAAAG+TGG | - | chr2.3:23958521-23958540 | None:intergenic | 20.0% |
| !!! | GTCATATAAATAGAATTTTC+AGG | - | chr2.3:23957515-23957534 | None:intergenic | 20.0% |
| !!! | TAACTTGCTTTCAAATAATA+GGG | + | chr2.3:23958119-23958138 | MS.gene060981:intron | 20.0% |
| !!! | TTTGACATCACTTTATTTTT+CGG | + | chr2.3:23957722-23957741 | MS.gene060981:intron | 20.0% |
| !!! | TTTTATTATTGCAAAACCTT+TGG | + | chr2.3:23958536-23958555 | MS.gene060981:intron | 20.0% |
| ! | AATGGATATCAATTACTTCA+AGG | + | chr2.3:23958398-23958417 | MS.gene060981:intron | 25.0% |
| ! | ATGGATATCAATTACTTCAA+GGG | + | chr2.3:23958399-23958418 | MS.gene060981:intron | 25.0% |
| ! | CAATATCTGACAATTCTATT+AGG | - | chr2.3:23956572-23956591 | None:intergenic | 25.0% |
| ! | CATCAGTTAAACTAACATAT+AGG | - | chr2.3:23957280-23957299 | None:intergenic | 25.0% |
| ! | GTAAGTGAATGAATATATGT+TGG | + | chr2.3:23956668-23956687 | MS.gene060981:intron | 25.0% |
| ! | GTAATTGATATCCATTTAAG+GGG | - | chr2.3:23958394-23958413 | None:intergenic | 25.0% |
| ! | TGGTATATACTTTCATAGAA+AGG | + | chr2.3:23957997-23958016 | MS.gene060981:intron | 25.0% |
| ! | TTGATGGAAAAGAAAAAACA+AGG | - | chr2.3:23958054-23958073 | None:intergenic | 25.0% |
| !! | ATATGTTAGTTTAACTGATG+AGG | + | chr2.3:23957280-23957299 | MS.gene060981:intron | 25.0% |
| !! | ATCTGAAAAATCGGTTTAAA+CGG | - | chr2.3:23956290-23956309 | None:intergenic | 25.0% |
| !! | ATTGTTCAGTGATTTTAAAC+AGG | + | chr2.3:23956995-23957014 | MS.gene060981:intron | 25.0% |
| !! | TAATGACTTCAATGTTTTCA+AGG | - | chr2.3:23958234-23958253 | None:intergenic | 25.0% |
| !!! | ATTTGGTTTGGTTTTTGAAT+AGG | + | chr2.3:23956726-23956745 | MS.gene060981:intron | 25.0% |
| !!! | CCATTTTTCTCAAACTTTAT+GGG | + | chr2.3:23957764-23957783 | MS.gene060981:intron | 25.0% |
| !!! | CTAACTTGCTTTCAAATAAT+AGG | + | chr2.3:23958118-23958137 | MS.gene060981:intron | 25.0% |
| AATATGAAAGAACGTATGCT+AGG | + | chr2.3:23958359-23958378 | MS.gene060981:intron | 30.0% | |
| ACTACTTCAAACAACCTATT+TGG | - | chr2.3:23956822-23956841 | None:intergenic | 30.0% | |
| AGTTTGAGAAAAATGGCTTT+AGG | - | chr2.3:23957760-23957779 | None:intergenic | 30.0% | |
| ATACGTTCTTTCATATTCAC+CGG | - | chr2.3:23958356-23958375 | None:intergenic | 30.0% | |
| ATCAATTACTTCAAGGGATT+GGG | + | chr2.3:23958405-23958424 | MS.gene060981:intron | 30.0% | |
| ATCTTGAAATGAATGATTGC+AGG | + | chr2.3:23957555-23957574 | MS.gene060981:intron | 30.0% | |
| ATTGAGTGTTTGAAGATCAT+CGG | - | chr2.3:23956847-23956866 | None:intergenic | 30.0% | |
| ATTTCCTTTACACATGCATA+TGG | + | chr2.3:23957837-23957856 | MS.gene060981:intron | 30.0% | |
| CCCATAAAGTTTGAGAAAAA+TGG | - | chr2.3:23957767-23957786 | None:intergenic | 30.0% | |
| CTGAAGGATTATTGACAAAT+TGG | + | chr2.3:23957977-23957996 | MS.gene060981:intron | 30.0% | |
| GAAACTGTTCATCAAATGTT+TGG | + | chr2.3:23958145-23958164 | MS.gene060981:CDS | 30.0% | |
| GACACAATTATAAGCAAGTA+AGG | - | chr2.3:23956934-23956953 | None:intergenic | 30.0% | |
| GATTGAATGTTACATGTGTT+TGG | - | chr2.3:23956602-23956621 | None:intergenic | 30.0% | |
| GTAAGGCAGATAGTAAAAAA+CGG | - | chr2.3:23956917-23956936 | None:intergenic | 30.0% | |
| TATCAATTACTTCAAGGGAT+TGG | + | chr2.3:23958404-23958423 | MS.gene060981:intron | 30.0% | |
| TCAATGATATCCCTCAATTT+CGG | - | chr2.3:23958902-23958921 | None:intergenic | 30.0% | |
| TCTGAGAAAATGTTCGAATA+CGG | + | chr2.3:23958734-23958753 | MS.gene060981:CDS | 30.0% | |
| TCTTGAAATGAATGATTGCA+GGG | + | chr2.3:23957556-23957575 | MS.gene060981:intron | 30.0% | |
| TGGTGACATATAATCTTCAA+AGG | + | chr2.3:23959086-23959105 | MS.gene060981:CDS | 30.0% | |
| TGTGCGATGTAATTCATAAA+CGG | - | chr2.3:23956497-23956516 | None:intergenic | 30.0% | |
| TTATGAATTACATCGCACAA+TGG | + | chr2.3:23956498-23956517 | MS.gene060981:intron | 30.0% | |
| TTGCTTTCAAATAATAGGGA+AGG | + | chr2.3:23958123-23958142 | MS.gene060981:intron | 30.0% | |
| TTTCAAATTCTGCTATGCTA+TGG | + | chr2.3:23957148-23957167 | MS.gene060981:intron | 30.0% | |
| TTTGTCAATAATCCTTCAGA+AGG | - | chr2.3:23957976-23957995 | None:intergenic | 30.0% | |
| ! | AACAACCTATTTGGTGAAAT+AGG | - | chr2.3:23956813-23956832 | None:intergenic | 30.0% |
| ! | AACTTTGGCATTGAAAGATT+TGG | + | chr2.3:23956709-23956728 | MS.gene060981:intron | 30.0% |
| ! | ACAACCTATTTGGTGAAATA+GGG | - | chr2.3:23956812-23956831 | None:intergenic | 30.0% |
| ! | CTTTGCAAAGCATTAACAAA+CGG | - | chr2.3:23956391-23956410 | None:intergenic | 30.0% |
| ! | TCTGAAAAATCGGTTTAAAC+GGG | - | chr2.3:23956289-23956308 | None:intergenic | 30.0% |
| ! | TTTGCAAAGCATTAACAAAC+GGG | - | chr2.3:23956390-23956409 | None:intergenic | 30.0% |
| !! | GTTTAAACCGATTTTTCAGA+TGG | + | chr2.3:23956289-23956308 | MS.gene060981:intron | 30.0% |
| !! | TGATTTTAGAAGTGGAACTT+TGG | + | chr2.3:23956694-23956713 | MS.gene060981:intron | 30.0% |
| !!! | GCCATTTTTCTCAAACTTTA+TGG | + | chr2.3:23957763-23957782 | MS.gene060981:intron | 30.0% |
| !!! | GTTGGTATTGATTTTAGAAG+TGG | + | chr2.3:23956686-23956705 | MS.gene060981:intron | 30.0% |
| !!! | TTTTCAAATTAGTATCGGTC+TGG | + | chr2.3:23956641-23956660 | MS.gene060981:intron | 30.0% |
| ACAACATCGAGTTAGAATAG+AGG | - | chr2.3:23958096-23958115 | None:intergenic | 35.0% | |
| AGAAAAGCTGAAAAGCTAGA+AGG | - | chr2.3:23957223-23957242 | None:intergenic | 35.0% | |
| AGTCATTAAACTTATCAGCC+AGG | + | chr2.3:23958246-23958265 | MS.gene060981:CDS | 35.0% | |
| AGTGTAGCGGTATTCAAAAA+CGG | - | chr2.3:23957051-23957070 | None:intergenic | 35.0% | |
| ATACATAGCAGATGTAGCTT+TGG | - | chr2.3:23957951-23957970 | None:intergenic | 35.0% | |
| CAACATCGAGTTAGAATAGA+GGG | - | chr2.3:23958095-23958114 | None:intergenic | 35.0% | |
| CATATTGGATTTCACGCAAT+CGG | + | chr2.3:23958793-23958812 | MS.gene060981:CDS | 35.0% | |
| CTGAGAAAATGTTCGAATAC+GGG | + | chr2.3:23958735-23958754 | MS.gene060981:CDS | 35.0% | |
| GAGATCTGTATACTTACTCA+AGG | - | chr2.3:23957441-23957460 | None:intergenic | 35.0% | |
| GCAATTAAAGACCTTGCAAA+AGG | + | chr2.3:23956759-23956778 | MS.gene060981:CDS | 35.0% | |
| GGAAATCAAATGTCACAGTT+TGG | - | chr2.3:23958033-23958052 | None:intergenic | 35.0% | |
| TATACTCAAACAGACAAGAC+AGG | - | chr2.3:23956956-23956975 | None:intergenic | 35.0% | |
| TCAGCTGCAGATATTAAAAC+TGG | - | chr2.3:23957337-23957356 | None:intergenic | 35.0% | |
| TCATGTTTGCACAATCATCA+TGG | + | chr2.3:23958197-23958216 | MS.gene060981:CDS | 35.0% | |
| TCGGCTTAACTAAACAAGTT+AGG | - | chr2.3:23956414-23956433 | None:intergenic | 35.0% | |
| ! | AAATCGGTTTAAACGGGTTT+CGG | - | chr2.3:23956283-23956302 | None:intergenic | 35.0% |
| ! | CAACCTATTTGGTGAAATAG+GGG | - | chr2.3:23956811-23956830 | None:intergenic | 35.0% |
| ! | GTATAATGATGGAACTTACC+TGG | - | chr2.3:23958267-23958286 | None:intergenic | 35.0% |
| ! | GTGATTAAAGATTTTGCCAG+TGG | + | chr2.3:23958569-23958588 | MS.gene060981:CDS | 35.0% |
| ! | TACCTGCTATTTGACAATAC+TGG | + | chr2.3:23957176-23957195 | MS.gene060981:intron | 35.0% |
| ! | TCAAATGTTTGGAACAAGAG+TGG | + | chr2.3:23958156-23958175 | MS.gene060981:CDS | 35.0% |
| ! | TCAAGTTCAATCCTTTTGCA+AGG | - | chr2.3:23956773-23956792 | None:intergenic | 35.0% |
| ! | TGGCATTGAAAGATTTGGTT+TGG | + | chr2.3:23956714-23956733 | MS.gene060981:intron | 35.0% |
| !! | AAAAGAAGCATTAGATCGCT+CGG | + | chr2.3:23956532-23956551 | MS.gene060981:intron | 35.0% |
| !! | AAACCGATTTTTCAGATGGA+CGG | + | chr2.3:23956293-23956312 | MS.gene060981:intron | 35.0% |
| !! | AGAGATTCTTTCTGAAGTAG+AGG | - | chr2.3:23956443-23956462 | None:intergenic | 35.0% |
| !! | ATCAAGTTGGTTAAGAGTTG+TGG | + | chr2.3:23958959-23958978 | MS.gene060981:CDS | 35.0% |
| !! | GACTTCAATGTTTTCAAGGT+TGG | - | chr2.3:23958230-23958249 | None:intergenic | 35.0% |
| !! | TCAAGTTGGTTAAGAGTTGT+GGG | + | chr2.3:23958960-23958979 | MS.gene060981:CDS | 35.0% |
| !! | TTAAACGGGTTTCGGTTTTA+CGG | - | chr2.3:23956275-23956294 | None:intergenic | 35.0% |
| !!! | GGGCGTTTTGATTTTAATCT+TGG | + | chr2.3:23957784-23957803 | MS.gene060981:intron | 35.0% |
| !!! | TGGTTTGGTTTTTGAATAGG+TGG | + | chr2.3:23956729-23956748 | MS.gene060981:intron | 35.0% |
| ACTATAGCGCTATAGTGTAG+CGG | - | chr2.3:23957064-23957083 | None:intergenic | 40.0% | |
| AGAGCTAAACGATACACACT+TGG | - | chr2.3:23959058-23959077 | None:intergenic | 40.0% | |
| ATCATTCCAAGATTCAACCC+TGG | + | chr2.3:23958330-23958349 | MS.gene060981:intron | 40.0% | |
| ATCCCGTCCATCTGAAAAAT+CGG | - | chr2.3:23956299-23956318 | None:intergenic | 40.0% | |
| CAACCCCTATTTCACCAAAT+AGG | + | chr2.3:23956805-23956824 | MS.gene060981:CDS | 40.0% | |
| CAGACCATATGCATGTGTAA+AGG | - | chr2.3:23957844-23957863 | None:intergenic | 40.0% | |
| GAAAGAACGTATGCTAGGAT+AGG | + | chr2.3:23958364-23958383 | MS.gene060981:intron | 40.0% | |
| GACCAGTATTGTCAAATAGC+AGG | - | chr2.3:23957181-23957200 | None:intergenic | 40.0% | |
| GAGTCTGAATTTAGCGAGAT+TGG | + | chr2.3:23958920-23958939 | MS.gene060981:CDS | 40.0% | |
| GGAGAAAGAACCGAAATTGA+GGG | + | chr2.3:23958889-23958908 | MS.gene060981:CDS | 40.0% | |
| GGATGCTCTTGATAGATTGT+AGG | + | chr2.3:23957301-23957320 | MS.gene060981:intron | 40.0% | |
| TGCTATGTATCACCTTCTGA+AGG | + | chr2.3:23957961-23957980 | MS.gene060981:intron | 40.0% | |
| TGGAGAAAGAACCGAAATTG+AGG | + | chr2.3:23958888-23958907 | MS.gene060981:CDS | 40.0% | |
| TTCGAATACGGGAAGAATCT+CGG | + | chr2.3:23958746-23958765 | MS.gene060981:CDS | 40.0% | |
| TTCTCCAACGCGAAAATTAC+AGG | - | chr2.3:23958875-23958894 | None:intergenic | 40.0% | |
| ! | AAGTTGGTTAAGAGTTGTGG+GGG | + | chr2.3:23958962-23958981 | MS.gene060981:CDS | 40.0% |
| ! | AATCGAAAGAGCACAAGAGT+TGG | + | chr2.3:23958985-23959004 | MS.gene060981:CDS | 40.0% |
| ! | TCTGAAGTAGAGGTGGAAAT+CGG | - | chr2.3:23956433-23956452 | None:intergenic | 40.0% |
| ! | TTCTTTTCCATCAACTCTGC+TGG | + | chr2.3:23958060-23958079 | MS.gene060981:intron | 40.0% |
| !! | AACCGATTTTTCAGATGGAC+GGG | + | chr2.3:23956294-23956313 | MS.gene060981:intron | 40.0% |
| !! | AGCTTGCTTTATTTCTCCAC+TGG | - | chr2.3:23958588-23958607 | None:intergenic | 40.0% |
| !! | ATTTTTCAGATGGACGGGAT+TGG | + | chr2.3:23956299-23956318 | MS.gene060981:intron | 40.0% |
| !! | CAAGTTGGTTAAGAGTTGTG+GGG | + | chr2.3:23958961-23958980 | MS.gene060981:CDS | 40.0% |
| !! | GATTCTTTCTGAAGTAGAGG+TGG | - | chr2.3:23956440-23956459 | None:intergenic | 40.0% |
| !! | GTTTCGGTTTTACGGGTTAT+CGG | - | chr2.3:23956267-23956286 | None:intergenic | 40.0% |
| !! | TAAACGGGTTTCGGTTTTAC+GGG | - | chr2.3:23956274-23956293 | None:intergenic | 40.0% |
| !! | TCTTGTGTTCTTGGTGTCAA+GGG | + | chr2.3:23957396-23957415 | MS.gene060981:CDS | 40.0% |
| !! | TGTGTATCGTTTAGCTCTTG+AGG | + | chr2.3:23959060-23959079 | MS.gene060981:CDS | 40.0% |
| !! | TTACGGGTTATCGGTTTGTA+CGG | - | chr2.3:23956258-23956277 | None:intergenic | 40.0% |
| !! | TTTTTCAGATGGACGGGATT+GGG | + | chr2.3:23956300-23956319 | MS.gene060981:intron | 40.0% |
| AATCACCTGTCACACACCAA+AGG | - | chr2.3:23958555-23958574 | None:intergenic | 45.0% | |
| ACTGAAACCAGCAGAGTTGA+TGG | - | chr2.3:23958070-23958089 | None:intergenic | 45.0% | |
| CCAAGTTGTCGACGACATAT+TGG | + | chr2.3:23958778-23958797 | MS.gene060981:CDS | 45.0% | |
| CCAATATGTCGTCGACAACT+TGG | - | chr2.3:23958781-23958800 | None:intergenic | 45.0% | |
| CGAAAATTACAGGAGCTGTC+AGG | - | chr2.3:23958865-23958884 | None:intergenic | 45.0% | |
| GATGAGAGTGACATGAGAAG+AGG | + | chr2.3:23957659-23957678 | MS.gene060981:CDS | 45.0% | |
| GCTAAACGATACACACTTGG+AGG | - | chr2.3:23959055-23959074 | None:intergenic | 45.0% | |
| GGATAGGTGAACCCCTTAAA+TGG | + | chr2.3:23958380-23958399 | MS.gene060981:intron | 45.0% | |
| TATGTCGTCGACAACTTGGA+AGG | - | chr2.3:23958777-23958796 | None:intergenic | 45.0% | |
| TCTTGACGAAGCGATCAAGT+TGG | + | chr2.3:23958946-23958965 | MS.gene060981:CDS | 45.0% | |
| TCTTTCATATTCACCGGCCA+GGG | - | chr2.3:23958350-23958369 | None:intergenic | 45.0% | |
| TTCTTTCATATTCACCGGCC+AGG | - | chr2.3:23958351-23958370 | None:intergenic | 45.0% | |
| TTGATTGCTGCCAGCGTAAA+AGG | + | chr2.3:23958677-23958696 | MS.gene060981:CDS | 45.0% | |
| TTGTCAAATAGCCGCTGTTG+CGG | - | chr2.3:23957088-23957107 | None:intergenic | 45.0% | |
| TTTGGTGAAATAGGGGTTGC+TGG | - | chr2.3:23956804-23956823 | None:intergenic | 45.0% | |
| ! | AAAGGAGCTGCAGTTTTCAG+CGG | + | chr2.3:23958695-23958714 | MS.gene060981:CDS | 45.0% |
| ! | AGCTCCTGTAATTTTCGCGT+TGG | + | chr2.3:23958868-23958887 | MS.gene060981:CDS | 45.0% |
| ! | CAAAACCTTTGGTGTGTGAC+AGG | + | chr2.3:23958547-23958566 | MS.gene060981:intron | 45.0% |
| ! | CAAAGCATTAACAAACGGGC+GGG | - | chr2.3:23956386-23956405 | None:intergenic | 45.0% |
| ! | GCAAAGCATTAACAAACGGG+CGG | - | chr2.3:23956387-23956406 | None:intergenic | 45.0% |
| ! | TTTTACGCTGGCAGCAATCA+AGG | - | chr2.3:23958678-23958697 | None:intergenic | 45.0% |
| !! | AGCAGATCTTTAGTGCTGGT+GGG | + | chr2.3:23957356-23957375 | MS.gene060981:CDS | 45.0% |
| !! | CTCTTGTGTTCTTGGTGTCA+AGG | + | chr2.3:23957395-23957414 | MS.gene060981:CDS | 45.0% |
| !! | GGTTATCGGTTTGTACGGTT+CGG | - | chr2.3:23956253-23956272 | None:intergenic | 45.0% |
| !! | TCGTTTAGCTCTTGAGGACA+TGG | + | chr2.3:23959066-23959085 | MS.gene060981:CDS | 45.0% |
| !! | TTTGTACGGTTCGGTGGATA+CGG | - | chr2.3:23956244-23956263 | None:intergenic | 45.0% |
| ACTTGGAAAGCCTGCATGCA+CGG | + | chr2.3:23958823-23958842 | MS.gene060981:CDS | 50.0% | |
| AGGAGCTGTCAGGTTACCTT+TGG | - | chr2.3:23958855-23958874 | None:intergenic | 50.0% | |
| GAAAAGCTAGAAGGCTCAGC+AGG | - | chr2.3:23957214-23957233 | None:intergenic | 50.0% | |
| GACACCAAGAACACAAGAGC+CGG | - | chr2.3:23957394-23957413 | None:intergenic | 50.0% | |
| GCTGAGCAGATCTTTAGTGC+TGG | + | chr2.3:23957352-23957371 | MS.gene060981:CDS | 50.0% | |
| GTGTATGCAAGCGTGTGACA+TGG | - | chr2.3:23957471-23957490 | None:intergenic | 50.0% | |
| TTCCAAGATTCAACCCTGGC+CGG | + | chr2.3:23958334-23958353 | MS.gene060981:intron | 50.0% | |
| TTGAGATAGCACCCGTGGTT+TGG | + | chr2.3:23956325-23956344 | MS.gene060981:intron | 50.0% | |
| ! | AAACCACGGGTGCTATCTCA+AGG | - | chr2.3:23956326-23956345 | None:intergenic | 50.0% |
| ! | AACTGCAGCTCCTTTTACGC+TGG | - | chr2.3:23958690-23958709 | None:intergenic | 50.0% |
| ! | CATTAACAAACGGGCGGGTT+CGG | - | chr2.3:23956381-23956400 | None:intergenic | 50.0% |
| ! | GAGCAGATCTTTAGTGCTGG+TGG | + | chr2.3:23957355-23957374 | MS.gene060981:CDS | 50.0% |
| !! | TATCGGTTTGTACGGTTCGG+TGG | - | chr2.3:23956250-23956269 | None:intergenic | 50.0% |
| !! | TCTTTAGTGCTGGTGGGAAG+AGG | + | chr2.3:23957362-23957381 | MS.gene060981:CDS | 50.0% |
| !! | TTGTACGGTTCGGTGGATAC+GGG | - | chr2.3:23956243-23956262 | None:intergenic | 50.0% |
| ACCCAATCCGGTCCAAACCA+CGG | - | chr2.3:23956340-23956359 | None:intergenic | 55.0% | |
| ACGCAATCGGCAGAGCAACT+TGG | + | chr2.3:23958806-23958825 | MS.gene060981:CDS | 55.0% | |
| ACTTGCGCGCAGGGTTACTT+TGG | + | chr2.3:23958434-23958453 | MS.gene060981:intron | 55.0% | |
| CTGTCAGGTTACCTTTGGCG+AGG | - | chr2.3:23958850-23958869 | None:intergenic | 55.0% | |
| GCGCTATAGTACCGCAACAG+CGG | + | chr2.3:23957074-23957093 | MS.gene060981:intron | 55.0% | |
| TACGCTGGCAGCAATCAAGG+AGG | - | chr2.3:23958675-23958694 | None:intergenic | 55.0% | |
| TCGGGCTCAAACACCCAATC+CGG | - | chr2.3:23956352-23956371 | None:intergenic | 55.0% | |
| TGGAACAAGAGTGGCAGTGC+TGG | + | chr2.3:23958165-23958184 | MS.gene060981:CDS | 55.0% | |
| TGGTGGGAAGAGGATGAGAC+CGG | + | chr2.3:23957372-23957391 | MS.gene060981:CDS | 55.0% | |
| ! | ATAGCACCCGTGGTTTGGAC+CGG | + | chr2.3:23956330-23956349 | MS.gene060981:intron | 55.0% |
| ! | CTCAAGGCCATGTAGCTCTG+CGG | - | chr2.3:23957425-23957444 | None:intergenic | 55.0% |
| ! | GAGACCGGCTCTTGTGTTCT+TGG | + | chr2.3:23957387-23957406 | MS.gene060981:CDS | 55.0% |
| AGTAACCCTGCGCGCAAGTG+TGG | - | chr2.3:23958433-23958452 | None:intergenic | 60.0% | |
| CACCGGCCAGGGTTGAATCT+TGG | - | chr2.3:23958339-23958358 | None:intergenic | 60.0% | |
| CCCAATCCGGTCCAAACCAC+GGG | - | chr2.3:23956339-23956358 | None:intergenic | 60.0% | |
| ! | AACAAACGGGCGGGTTCGGA+CGG | - | chr2.3:23956377-23956396 | None:intergenic | 60.0% |
| ! | ACCCGTGGTTTGGACCGGAT+TGG | + | chr2.3:23956335-23956354 | MS.gene060981:intron | 60.0% |
| ! | CCCGTGGTTTGGACCGGATT+GGG | + | chr2.3:23956336-23956355 | MS.gene060981:intron | 60.0% |
| !! | ACAAGAGTGGCAGTGCTGGC+TGG | + | chr2.3:23958169-23958188 | MS.gene060981:CDS | 60.0% |
| !! | ACGGTTCGGTGGATACGGGT+TGG | - | chr2.3:23956239-23956258 | None:intergenic | 60.0% |
| AGGGCGACCGCAGAGCTACA+TGG | + | chr2.3:23957415-23957434 | MS.gene060981:CDS | 65.0% | |
| GCATGCACGGACCTCGCCAA+AGG | + | chr2.3:23958836-23958855 | MS.gene060981:CDS | 65.0% | |
| GGGCCTTGAGATAGCACCCG+TGG | + | chr2.3:23956320-23956339 | MS.gene060981:intron | 65.0% | |
| TTGGCGAGGTCCGTGCATGC+AGG | - | chr2.3:23958836-23958855 | None:intergenic | 65.0% | |
| GGGCTCCACACTTGCGCGCA+GGG | + | chr2.3:23958425-23958444 | MS.gene060981:intron | 70.0% | |
| TGGGCTCCACACTTGCGCGC+AGG | + | chr2.3:23958424-23958443 | MS.gene060981:intron | 70.0% | |
| ! | CGGGCGGGTTCGGACGGATT+CGG | - | chr2.3:23956371-23956390 | None:intergenic | 70.0% |
| ! | GGGCGGGTTCGGACGGATTC+GGG | - | chr2.3:23956370-23956389 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 23956221 | 23959117 | 23956221 | ID=MS.gene060981 |
| chr2.3 | mRNA | 23956221 | 23959117 | 23956221 | ID=MS.gene060981.t1;Parent=MS.gene060981 |
| chr2.3 | exon | 23956221 | 23956242 | 23956221 | ID=MS.gene060981.t1.exon1;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23956221 | 23956242 | 23956221 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| chr2.3 | exon | 23956748 | 23956881 | 23956748 | ID=MS.gene060981.t1.exon2;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23956748 | 23956881 | 23956748 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| chr2.3 | exon | 23957316 | 23957443 | 23957316 | ID=MS.gene060981.t1.exon3;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23957316 | 23957443 | 23957316 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| chr2.3 | exon | 23957577 | 23957680 | 23957577 | ID=MS.gene060981.t1.exon4;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23957577 | 23957680 | 23957577 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| chr2.3 | exon | 23958140 | 23958267 | 23958140 | ID=MS.gene060981.t1.exon5;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23958140 | 23958267 | 23958140 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| chr2.3 | exon | 23958569 | 23959117 | 23958569 | ID=MS.gene060981.t1.exon6;Parent=MS.gene060981.t1 |
| chr2.3 | CDS | 23958569 | 23959117 | 23958569 | ID=cds.MS.gene060981.t1;Parent=MS.gene060981.t1 |
| Gene Sequence |
| Protein sequence |
