Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07014.t1 | XP_013450381.1 | 98.4 | 812 | 13 | 0 | 18 | 829 | 72 | 883 | 0.00E+00 | 1569.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07014.t1 | P0DKG8 | 71.7 | 780 | 216 | 4 | 52 | 829 | 107 | 883 | 0.0e+00 | 1117.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07014.t1 | A0A072U3V9 | 98.4 | 812 | 13 | 0 | 18 | 829 | 72 | 883 | 0.0e+00 | 1569.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049427 | MS.gene07014 | 0.812529 | 4.05E-51 | -1.69E-46 |
MS.gene050404 | MS.gene07014 | 0.834856 | 2.35E-56 | -1.69E-46 |
MS.gene050406 | MS.gene07014 | 0.821957 | 3.06E-53 | -1.69E-46 |
MS.gene050426 | MS.gene07014 | -0.802892 | 4.52E-49 | -1.69E-46 |
MS.gene050507 | MS.gene07014 | 0.804185 | 2.44E-49 | -1.69E-46 |
MS.gene050529 | MS.gene07014 | 0.825826 | 3.79E-54 | -1.69E-46 |
MS.gene050670 | MS.gene07014 | 0.801481 | 8.82E-49 | -1.69E-46 |
MS.gene050812 | MS.gene07014 | 0.879494 | 1.19E-69 | -1.69E-46 |
MS.gene051171 | MS.gene07014 | 0.878407 | 2.88E-69 | -1.69E-46 |
MS.gene051208 | MS.gene07014 | 0.822635 | 2.13E-53 | -1.69E-46 |
MS.gene051240 | MS.gene07014 | 0.810772 | 9.76E-51 | -1.69E-46 |
MS.gene051242 | MS.gene07014 | 0.879995 | 7.90E-70 | -1.69E-46 |
MS.gene051244 | MS.gene07014 | 0.880788 | 4.11E-70 | -1.69E-46 |
MS.gene051525 | MS.gene07014 | 0.808494 | 3.01E-50 | -1.69E-46 |
MS.gene051582 | MS.gene07014 | 0.841387 | 4.90E-58 | -1.69E-46 |
MS.gene052134 | MS.gene07014 | 0.827635 | 1.40E-54 | -1.69E-46 |
MS.gene052135 | MS.gene07014 | 0.818598 | 1.80E-52 | -1.69E-46 |
MS.gene052188 | MS.gene07014 | 0.819482 | 1.13E-52 | -1.69E-46 |
MS.gene052310 | MS.gene07014 | 0.836168 | 1.10E-56 | -1.69E-46 |
MS.gene052340 | MS.gene07014 | 0.835279 | 1.84E-56 | -1.69E-46 |
MS.gene052481 | MS.gene07014 | 0.82922 | 5.81E-55 | -1.69E-46 |
MS.gene052485 | MS.gene07014 | 0.801221 | 9.97E-49 | -1.69E-46 |
MS.gene052505 | MS.gene07014 | 0.803042 | 4.21E-49 | -1.69E-46 |
MS.gene053330 | MS.gene07014 | 0.890233 | 1.19E-73 | -1.69E-46 |
MS.gene053907 | MS.gene07014 | 0.816852 | 4.47E-52 | -1.69E-46 |
MS.gene053971 | MS.gene07014 | 0.845825 | 3.19E-59 | -1.69E-46 |
MS.gene054102 | MS.gene07014 | 0.819087 | 1.40E-52 | -1.69E-46 |
MS.gene054110 | MS.gene07014 | 0.81609 | 6.61E-52 | -1.69E-46 |
MS.gene054719 | MS.gene07014 | 0.829629 | 4.62E-55 | -1.69E-46 |
MS.gene055370 | MS.gene07014 | 0.880228 | 6.52E-70 | -1.69E-46 |
MS.gene055428 | MS.gene07014 | 0.807756 | 4.33E-50 | -1.69E-46 |
MS.gene055539 | MS.gene07014 | 0.837598 | 4.73E-57 | -1.69E-46 |
MS.gene05553 | MS.gene07014 | 0.855943 | 4.49E-62 | -1.69E-46 |
MS.gene056305 | MS.gene07014 | 0.813 | 3.19E-51 | -1.69E-46 |
MS.gene056351 | MS.gene07014 | 0.806643 | 7.44E-50 | -1.69E-46 |
MS.gene056451 | MS.gene07014 | 0.812604 | 3.90E-51 | -1.69E-46 |
MS.gene056612 | MS.gene07014 | 0.80236 | 5.82E-49 | -1.69E-46 |
MS.gene056633 | MS.gene07014 | 0.887204 | 1.75E-72 | -1.69E-46 |
MS.gene056659 | MS.gene07014 | 0.815529 | 8.83E-52 | -1.69E-46 |
MS.gene056664 | MS.gene07014 | 0.89091 | 6.42E-74 | -1.69E-46 |
MS.gene056796 | MS.gene07014 | 0.835675 | 1.46E-56 | -1.69E-46 |
MS.gene05702 | MS.gene07014 | 0.81662 | 5.04E-52 | -1.69E-46 |
MS.gene057124 | MS.gene07014 | 0.800028 | 1.75E-48 | -1.69E-46 |
MS.gene057196 | MS.gene07014 | 0.853374 | 2.49E-61 | -1.69E-46 |
MS.gene057332 | MS.gene07014 | 0.828218 | 1.02E-54 | -1.69E-46 |
MS.gene057658 | MS.gene07014 | 0.802712 | 4.93E-49 | -1.69E-46 |
MS.gene057749 | MS.gene07014 | 0.800494 | 1.40E-48 | -1.69E-46 |
MS.gene058002 | MS.gene07014 | 0.819499 | 1.12E-52 | -1.69E-46 |
MS.gene058142 | MS.gene07014 | 0.836096 | 1.14E-56 | -1.69E-46 |
MS.gene058233 | MS.gene07014 | 0.880273 | 6.29E-70 | -1.69E-46 |
MS.gene058276 | MS.gene07014 | 0.859145 | 5.06E-63 | -1.69E-46 |
MS.gene058365 | MS.gene07014 | 0.813329 | 2.70E-51 | -1.69E-46 |
MS.gene058444 | MS.gene07014 | 0.8153 | 9.92E-52 | -1.69E-46 |
MS.gene058743 | MS.gene07014 | 0.822685 | 2.08E-53 | -1.69E-46 |
MS.gene058746 | MS.gene07014 | 0.905096 | 6.16E-80 | -1.69E-46 |
MS.gene05907 | MS.gene07014 | 0.802418 | 5.66E-49 | -1.69E-46 |
MS.gene05914 | MS.gene07014 | 0.807873 | 4.09E-50 | -1.69E-46 |
MS.gene059512 | MS.gene07014 | 0.814398 | 1.57E-51 | -1.69E-46 |
MS.gene059597 | MS.gene07014 | 0.803705 | 3.07E-49 | -1.69E-46 |
MS.gene059676 | MS.gene07014 | 0.800089 | 1.70E-48 | -1.69E-46 |
MS.gene059688 | MS.gene07014 | 0.806527 | 7.88E-50 | -1.69E-46 |
MS.gene059692 | MS.gene07014 | 0.81759 | 3.05E-52 | -1.69E-46 |
MS.gene059695 | MS.gene07014 | 0.816285 | 5.98E-52 | -1.69E-46 |
MS.gene059869 | MS.gene07014 | -0.809911 | 1.50E-50 | -1.69E-46 |
MS.gene059894 | MS.gene07014 | 0.83598 | 1.22E-56 | -1.69E-46 |
MS.gene060407 | MS.gene07014 | 0.906264 | 1.79E-80 | -1.69E-46 |
MS.gene061049 | MS.gene07014 | 0.818675 | 1.73E-52 | -1.69E-46 |
MS.gene061231 | MS.gene07014 | 0.823166 | 1.60E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene07014 | MS.gene007306 | PPI |
MS.gene07014 | MS.gene020558 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07014.t1 | MTR_7g108940 | 98.522 | 812 | 12 | 0 | 18 | 829 | 72 | 883 | 0.0 | 1663 |
MS.gene07014.t1 | MTR_7g108940 | 97.970 | 739 | 15 | 0 | 18 | 756 | 72 | 810 | 0.0 | 1501 |
MS.gene07014.t1 | MTR_8g020880 | 38.810 | 353 | 189 | 8 | 92 | 443 | 221 | 547 | 3.81e-62 | 223 |
MS.gene07014.t1 | MTR_8g020880 | 38.527 | 353 | 190 | 8 | 92 | 443 | 221 | 547 | 1.57e-61 | 221 |
MS.gene07014.t1 | MTR_4g123930 | 30.091 | 329 | 200 | 7 | 121 | 438 | 120 | 429 | 1.62e-38 | 150 |
MS.gene07014.t1 | MTR_4g123930 | 30.395 | 329 | 199 | 7 | 121 | 438 | 120 | 429 | 1.53e-37 | 149 |
MS.gene07014.t1 | MTR_4g123930 | 30.189 | 318 | 192 | 7 | 132 | 438 | 1 | 299 | 6.53e-37 | 142 |
MS.gene07014.t1 | MTR_4g123930 | 30.189 | 318 | 192 | 7 | 132 | 438 | 1 | 299 | 1.29e-35 | 141 |
MS.gene07014.t1 | MTR_5g007870 | 32.012 | 328 | 191 | 10 | 72 | 374 | 108 | 428 | 2.45e-34 | 141 |
MS.gene07014.t1 | MTR_5g007870 | 36.364 | 121 | 71 | 2 | 323 | 443 | 451 | 565 | 1.66e-15 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07014.t1 | AT4G02260 | 72.051 | 780 | 213 | 4 | 52 | 829 | 107 | 883 | 0.0 | 1169 |
MS.gene07014.t1 | AT4G02260 | 71.959 | 781 | 213 | 5 | 52 | 829 | 107 | 884 | 0.0 | 1164 |
MS.gene07014.t1 | AT4G02260 | 70.918 | 784 | 200 | 6 | 52 | 829 | 107 | 868 | 0.0 | 1139 |
MS.gene07014.t1 | AT4G02260 | 72.881 | 708 | 179 | 5 | 52 | 753 | 107 | 807 | 0.0 | 1060 |
MS.gene07014.t1 | AT1G54130 | 37.853 | 354 | 195 | 7 | 90 | 443 | 211 | 539 | 1.32e-62 | 224 |
MS.gene07014.t1 | AT3G14050 | 39.045 | 356 | 184 | 9 | 92 | 443 | 209 | 535 | 2.25e-62 | 224 |
MS.gene07014.t1 | AT3G17470 | 31.288 | 326 | 198 | 11 | 126 | 441 | 122 | 431 | 7.20e-37 | 145 |
MS.gene07014.t1 | AT3G17470 | 29.504 | 383 | 234 | 14 | 126 | 497 | 122 | 479 | 9.84e-37 | 147 |
MS.gene07014.t1 | AT3G17470 | 29.504 | 383 | 234 | 14 | 126 | 497 | 137 | 494 | 1.05e-36 | 147 |
Find 187 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCAGGACTTCTTTATATTT+TGG | 0.117821 | 7.2:-5324746 | None:intergenic |
TGAAGGAAATTTAGAAAATT+TGG | 0.135903 | 7.2:+5325384 | MS.gene07014:CDS |
GGACCTTCGGCAAATGTTTC+TGG | 0.140517 | 7.2:+5319451 | MS.gene07014:CDS |
GCAGATTTGCTATCATGTTC+TGG | 0.190657 | 7.2:+5322126 | MS.gene07014:intron |
CAAAGCAAACCTGTGCAATT+TGG | 0.221140 | 7.2:-5321852 | None:intergenic |
TCCTCTGTTTCTCTCAATTA+TGG | 0.228332 | 7.2:+5317539 | MS.gene07014:CDS |
CACTGTTACAAGAGATCTTC+TGG | 0.241677 | 7.2:+5322954 | MS.gene07014:CDS |
GAGAGGATAGAGGAGGAATT+TGG | 0.243763 | 7.2:+5319207 | MS.gene07014:CDS |
TGGACTAACTCCAGTTCTTT+AGG | 0.245830 | 7.2:-5318785 | None:intergenic |
AGATCAAATACCGGGTGTTT+TGG | 0.268009 | 7.2:+5325530 | MS.gene07014:CDS |
CCAGTAGCTCCAAACATAAA+AGG | 0.272058 | 7.2:+5324525 | MS.gene07014:CDS |
TATATGATACACACTGAAAT+TGG | 0.278187 | 7.2:+5323190 | MS.gene07014:CDS |
TTCACCTTTGCATAATCTTC+AGG | 0.279113 | 7.2:-5321288 | None:intergenic |
GCTTGGGATGTATCAAATTA+AGG | 0.281559 | 7.2:+5321029 | MS.gene07014:CDS |
CTCCTTTGGCAAAGTTGCTT+GGG | 0.299059 | 7.2:+5321013 | MS.gene07014:CDS |
CTGTGTGTAAAGAGCCTTAC+AGG | 0.317355 | 7.2:+5321601 | MS.gene07014:CDS |
GTTGAGGTTGCACGGATTCT+TGG | 0.319585 | 7.2:+5319002 | MS.gene07014:CDS |
CTTTCTCATGTTCTTTGAAT+AGG | 0.319692 | 7.2:-5321326 | None:intergenic |
CAGATTTGCTATCATGTTCT+GGG | 0.322566 | 7.2:+5322127 | MS.gene07014:intron |
TACATACAGATCTAGGAATA+GGG | 0.332916 | 7.2:-5322171 | None:intergenic |
GCCTCATGGCACAATATAGA+AGG | 0.336893 | 7.2:+5324800 | MS.gene07014:CDS |
ATTACAGGTATTTGCTCCTT+TGG | 0.341930 | 7.2:+5320999 | MS.gene07014:CDS |
GCTCCTTTGGCAAAGTTGCT+TGG | 0.345703 | 7.2:+5321012 | MS.gene07014:CDS |
ATACATACAGATCTAGGAAT+AGG | 0.350804 | 7.2:-5322172 | None:intergenic |
ATTGTTAACTTGAATCATAT+TGG | 0.354666 | 7.2:-5324723 | None:intergenic |
AGTGGGAGAGAATTCGTTAC+TGG | 0.356793 | 7.2:+5322618 | MS.gene07014:CDS |
AGCTTACCGTAAAAGCATTA+TGG | 0.356855 | 7.2:-5318805 | None:intergenic |
CATTTGTCCAGGAACTTGAT+TGG | 0.368685 | 7.2:+5319124 | MS.gene07014:intron |
CAAAGCCGTGCGTTGGGGTT+GGG | 0.369858 | 7.2:+5321986 | MS.gene07014:CDS |
TGTACCTCCCACAAACTTCC+AGG | 0.375552 | 7.2:-5318613 | None:intergenic |
ATTGCAACCCCTAAACCTAA+TGG | 0.376245 | 7.2:+5322320 | MS.gene07014:CDS |
CATTGCAATGGAGACATTAC+AGG | 0.381847 | 7.2:+5320984 | MS.gene07014:CDS |
TTAAACCAAAGCCGTGCGTT+GGG | 0.385297 | 7.2:+5321980 | MS.gene07014:CDS |
TGGGGTTGATCCATGGAATC+TGG | 0.390644 | 7.2:+5322146 | MS.gene07014:CDS |
GGTCTAAGAATTGATCATCT+TGG | 0.398616 | 7.2:-5321551 | None:intergenic |
ACACTTCACGAGGGATTCTC+TGG | 0.400032 | 7.2:+5318505 | MS.gene07014:CDS |
TATGTTCAGGCTTGAAATAC+AGG | 0.403830 | 7.2:+5322388 | MS.gene07014:CDS |
GTAGATTAGAACAGAAGAAA+TGG | 0.405177 | 7.2:+5322560 | MS.gene07014:intron |
CCAACCCCAACGCACGGCTT+TGG | 0.406391 | 7.2:-5321985 | None:intergenic |
ATGGCAGTTGTCTTGTTCTT+CGG | 0.412219 | 7.2:+5318558 | MS.gene07014:CDS |
CATGAGCTCTAGGGAATTTG+TGG | 0.417115 | 7.2:+5322930 | MS.gene07014:CDS |
ACATATGCCTCCACATAAAC+AGG | 0.418695 | 7.2:+5319661 | MS.gene07014:CDS |
ACCAGCTGTGGACTGCATAA+AGG | 0.423090 | 7.2:-5322009 | None:intergenic |
AACGACCAGGCTGAGGTTGA+TGG | 0.426492 | 7.2:+5325328 | MS.gene07014:intron |
GGCATTGCAGCTCACTATAG+TGG | 0.428991 | 7.2:+5322600 | MS.gene07014:CDS |
ATTTGTCCAGGAACTTGATT+GGG | 0.429628 | 7.2:+5319125 | MS.gene07014:intron |
TGTGACGCCAAGTGCTTTGT+CGG | 0.430385 | 7.2:-5318485 | None:intergenic |
CTAGATTTGCATCTAGAGAA+TGG | 0.434783 | 7.2:+5318539 | MS.gene07014:CDS |
CAGTAGCTCCAAACATAAAA+GGG | 0.435513 | 7.2:+5324526 | MS.gene07014:CDS |
GTATCTTCCTCCTAAAGAAC+TGG | 0.435659 | 7.2:+5318775 | MS.gene07014:CDS |
AGAATCCGTGCAACCTCAAC+CGG | 0.436241 | 7.2:-5318999 | None:intergenic |
TCCCAACTAGGTGTCAAAGC+TGG | 0.436553 | 7.2:+5319376 | MS.gene07014:intron |
AACAATTATTTCAGGCATGA+TGG | 0.437402 | 7.2:+5325138 | MS.gene07014:intron |
GATTGGGAGTCAATTGCTGC+TGG | 0.437948 | 7.2:+5319141 | MS.gene07014:CDS |
TTGCAACCCCTAAACCTAAT+GGG | 0.442273 | 7.2:+5322321 | MS.gene07014:CDS |
GCTTCTGCACCTTTCATGTC+AGG | 0.448291 | 7.2:+5317561 | MS.gene07014:CDS |
TCCTGCCAGGTTTAGAAAGT+TGG | 0.448380 | 7.2:+5324762 | MS.gene07014:CDS |
AACAAAATACATACAGATCT+AGG | 0.449095 | 7.2:-5322178 | None:intergenic |
GCCTTTATGCAGTCCACAGC+TGG | 0.449575 | 7.2:+5322008 | MS.gene07014:CDS |
CCAAAGCCGTGCGTTGGGGT+TGG | 0.452445 | 7.2:+5321985 | MS.gene07014:CDS |
GAGAGAATTCGTTACTGGCT+TGG | 0.454991 | 7.2:+5322623 | MS.gene07014:CDS |
CTTCATCATTCATCCGGTTG+AGG | 0.455435 | 7.2:+5318986 | MS.gene07014:CDS |
GTTATGTTATTTCAAGTTGA+AGG | 0.457526 | 7.2:+5325367 | MS.gene07014:CDS |
GCTGAGGTTGATGGCGGAAG+GGG | 0.457562 | 7.2:+5325337 | MS.gene07014:CDS |
ATGTAAATTTGAAGGGCAAA+GGG | 0.462707 | 7.2:+5324672 | MS.gene07014:CDS |
ATGGAAATTACCTGTTTATG+TGG | 0.465464 | 7.2:-5319671 | None:intergenic |
CCCAACTAGGTGTCAAAGCT+GGG | 0.468219 | 7.2:+5319377 | MS.gene07014:intron |
ATGGAATCACAGTGCTATGA+AGG | 0.470768 | 7.2:-5322352 | None:intergenic |
ATGTGAAAGCAGAGGACCTT+CGG | 0.473982 | 7.2:+5319438 | MS.gene07014:CDS |
AGGCTGAGGTTGATGGCGGA+AGG | 0.474494 | 7.2:+5325335 | MS.gene07014:intron |
TCTAATTGCATCAGGACCTT+AGG | 0.478487 | 7.2:+5318741 | MS.gene07014:intron |
AGACCTTATGACAGTTAAAA+CGG | 0.479370 | 7.2:+5321569 | MS.gene07014:CDS |
ATCCACTGTTACCTCTCCAC+TGG | 0.480367 | 7.2:-5323001 | None:intergenic |
CGTGCATCATGTAAATTTGA+AGG | 0.483447 | 7.2:+5324664 | MS.gene07014:CDS |
TTGTTGGCAACATGAGCTCT+AGG | 0.486743 | 7.2:+5322920 | MS.gene07014:CDS |
ACTGTCCTTCAGAGTAAGAA+TGG | 0.489568 | 7.2:+5324599 | MS.gene07014:CDS |
GATCAGGAAGCTTACCTCTT+CGG | 0.489957 | 7.2:-5324859 | None:intergenic |
CTCTAGAGTAGATCAAATAC+CGG | 0.491186 | 7.2:+5325521 | MS.gene07014:CDS |
CAAAGGGGACATGATGCTGC+AGG | 0.497067 | 7.2:+5324688 | MS.gene07014:CDS |
GCTTGGACACCCAAGGTCAA+TGG | 0.497685 | 7.2:+5324626 | MS.gene07014:CDS |
GGCTGAGGTTGATGGCGGAA+GGG | 0.499777 | 7.2:+5325336 | MS.gene07014:intron |
GAATTCGTTACTGGCTTGGT+TGG | 0.500544 | 7.2:+5322627 | MS.gene07014:CDS |
CTTGAATCATATTGGAGACA+TGG | 0.502218 | 7.2:-5324715 | None:intergenic |
CATGTTCTGGGGTTGATCCA+TGG | 0.504046 | 7.2:+5322139 | MS.gene07014:CDS |
ACTTTCTCAGTGATTCTGAC+GGG | 0.507221 | 7.2:+5324471 | MS.gene07014:CDS |
CTCAACCGGATGAATGATGA+AGG | 0.509670 | 7.2:-5318985 | None:intergenic |
CGAACCCTTCATCATTCATC+CGG | 0.509821 | 7.2:+5318980 | MS.gene07014:CDS |
GAGTGGCAAGAAGAGTTTGT+TGG | 0.510210 | 7.2:+5322904 | MS.gene07014:CDS |
AGAGTAAGAATGGAAGTGCT+TGG | 0.510899 | 7.2:+5324609 | MS.gene07014:CDS |
GGTTGATGGCGGAAGGGGAA+TGG | 0.511538 | 7.2:+5325342 | MS.gene07014:CDS |
TTCATCCGGTTGAGGTTGCA+CGG | 0.513436 | 7.2:+5318994 | MS.gene07014:CDS |
GGCTGAGGTCGCTACAGCAT+TGG | 0.515456 | 7.2:+5325159 | MS.gene07014:CDS |
TTATCGTCAAATTAGCAGAC+AGG | 0.517261 | 7.2:+5319615 | MS.gene07014:CDS |
ATTAAACCAAAGCCGTGCGT+TGG | 0.519871 | 7.2:+5321979 | MS.gene07014:CDS |
TGAGATTAACCAAATTGCAC+AGG | 0.524101 | 7.2:+5321843 | MS.gene07014:CDS |
TCATATTCCGACAAAGCACT+TGG | 0.525417 | 7.2:+5318478 | MS.gene07014:CDS |
AAATATAAAGAAGTCCTGCC+AGG | 0.526449 | 7.2:+5324749 | MS.gene07014:CDS |
GATGGTCTACTGGCTGTAGT+TGG | 0.526752 | 7.2:+5325553 | MS.gene07014:CDS |
CATTGTGGAAGGAGAGACTA+AGG | 0.527478 | 7.2:+5319245 | MS.gene07014:CDS |
GCATTTGCAAGCACTCGTGC+AGG | 0.528305 | 7.2:-5323365 | None:intergenic |
CTGTAGTTGGCCAAGCCTGA+TGG | 0.529497 | 7.2:+5325566 | MS.gene07014:CDS |
CAACAAGATGGTAGCTGCAA+AGG | 0.530841 | 7.2:+5323213 | MS.gene07014:CDS |
GTTTCGTGGATTAACCTGTA+AGG | 0.534166 | 7.2:-5321615 | None:intergenic |
CATGTAAATTTGAAGGGCAA+AGG | 0.535165 | 7.2:+5324671 | MS.gene07014:CDS |
CTCATGTTCTTTGAATAGGT+CGG | 0.536108 | 7.2:-5321322 | None:intergenic |
GAATAGGGGTCCAGATTCCA+TGG | 0.537999 | 7.2:-5322156 | None:intergenic |
TGCATACAACAGATAACCAT+TGG | 0.538972 | 7.2:-5324832 | None:intergenic |
GCCAACTTTCTAAACCTGGC+AGG | 0.545096 | 7.2:-5324763 | None:intergenic |
TGCAAGACACAAAATAATGA+AGG | 0.547606 | 7.2:+5324272 | MS.gene07014:CDS |
GCTTGCCAACTTTCTAAACC+TGG | 0.549616 | 7.2:-5324767 | None:intergenic |
TATTTCAGGCATGATGGCTG+AGG | 0.552186 | 7.2:+5325144 | MS.gene07014:intron |
GATACGAGATCACGGGCCTA+AGG | 0.552517 | 7.2:-5318757 | None:intergenic |
ACTGTTACAAGAGATCTTCT+GGG | 0.552683 | 7.2:+5322955 | MS.gene07014:CDS |
CACTTCCATTCTTACTCTGA+AGG | 0.552893 | 7.2:-5324604 | None:intergenic |
TACAACAGATAACCATTGGA+TGG | 0.554913 | 7.2:-5324828 | None:intergenic |
GCGTACTCTGAGTGCAATGT+TGG | 0.561487 | 7.2:-5322706 | None:intergenic |
CACTGAAATTGGCAACAAGA+TGG | 0.562829 | 7.2:+5323201 | MS.gene07014:CDS |
TTTGTACCCATTAGGTTTAG+GGG | 0.564612 | 7.2:-5322327 | None:intergenic |
ACTTCCAGGGGAAAACTCGC+TGG | 0.564635 | 7.2:-5318599 | None:intergenic |
AATGGATTTGATAGCTGAGA+GGG | 0.567318 | 7.2:+5322578 | MS.gene07014:CDS |
GGGTAAGTGGTTACCAGCTG+TGG | 0.569013 | 7.2:-5322021 | None:intergenic |
GACTTTCTCAGTGATTCTGA+CGG | 0.576627 | 7.2:+5324470 | MS.gene07014:CDS |
TGCTGGATTACTTCATGACA+CGG | 0.579642 | 7.2:+5319158 | MS.gene07014:CDS |
GAAATTACCTGTTTATGTGG+AGG | 0.581208 | 7.2:-5319668 | None:intergenic |
TAAACCAAAGCCGTGCGTTG+GGG | 0.582851 | 7.2:+5321981 | MS.gene07014:CDS |
TGTTGGCAACATGAGCTCTA+GGG | 0.586013 | 7.2:+5322921 | MS.gene07014:CDS |
GTCTTTGTATTTACACCCAG+TGG | 0.587156 | 7.2:+5322985 | MS.gene07014:CDS |
ACTCACCACACAAGAACATA+CGG | 0.588943 | 7.2:-5325197 | None:intergenic |
TTCCCCTGGAAGTTTGTGGG+AGG | 0.589656 | 7.2:+5318609 | MS.gene07014:CDS |
GCCATAATTGAGAGAAACAG+AGG | 0.590903 | 7.2:-5317540 | None:intergenic |
GCTTGCAAATGCAGAAGTTG+TGG | 0.591891 | 7.2:+5323376 | MS.gene07014:CDS |
TGTACAGAATAGCATTGCAA+TGG | 0.595760 | 7.2:+5320972 | MS.gene07014:intron |
GCATTGCAGCTCACTATAGT+GGG | 0.596921 | 7.2:+5322601 | MS.gene07014:CDS |
AAAGGCCCAACCCCAACGCA+CGG | 0.597406 | 7.2:-5321991 | None:intergenic |
GTACCTCCCACAAACTTCCA+GGG | 0.597986 | 7.2:-5318612 | None:intergenic |
TTAGGTTTAATGCAGGTCAA+CGG | 0.603196 | 7.2:+5323329 | MS.gene07014:intron |
ACATACAGATCTAGGAATAG+GGG | 0.604280 | 7.2:-5322170 | None:intergenic |
AAGCCCATAAAATTGCCTCA+TGG | 0.605242 | 7.2:+5324786 | MS.gene07014:CDS |
GGAGGAAGATACGAGATCAC+GGG | 0.606559 | 7.2:-5318764 | None:intergenic |
TAGAAGGGCATTCCATCCAA+TGG | 0.607450 | 7.2:+5324816 | MS.gene07014:CDS |
AGGAGGAAGATACGAGATCA+CGG | 0.607622 | 7.2:-5318765 | None:intergenic |
GTGCATCATGTAAATTTGAA+GGG | 0.610778 | 7.2:+5324665 | MS.gene07014:CDS |
TGGAAGTGCTTGGACACCCA+AGG | 0.611288 | 7.2:+5324619 | MS.gene07014:CDS |
CCTCATGGCACAATATAGAA+GGG | 0.612331 | 7.2:+5324801 | MS.gene07014:CDS |
TAGATTAAGAATCTTCCTCA+AGG | 0.612482 | 7.2:+5323145 | MS.gene07014:intron |
AATGTTTCTGGCTATGACAG+AGG | 0.612713 | 7.2:+5319463 | MS.gene07014:CDS |
TGTATTTACACCCAGTGGAG+AGG | 0.615293 | 7.2:+5322990 | MS.gene07014:CDS |
ACTAACTCCAGTTCTTTAGG+AGG | 0.618244 | 7.2:-5318782 | None:intergenic |
ATCCCAAGCAACTTTGCCAA+AGG | 0.618298 | 7.2:-5321015 | None:intergenic |
AAAGGGGACATGATGCTGCA+GGG | 0.620819 | 7.2:+5324689 | MS.gene07014:CDS |
AAACTCGCTGGCAACGTCCG+AGG | 0.623661 | 7.2:-5318587 | None:intergenic |
GAAAATATTATTGAACGGTG+TGG | 0.624304 | 7.2:+5324550 | MS.gene07014:CDS |
TCCACTGTTACCTCTCCACT+GGG | 0.626056 | 7.2:-5323000 | None:intergenic |
GGCTCAATGCTATTAGAGAG+TGG | 0.627954 | 7.2:+5322887 | MS.gene07014:CDS |
AGATTTGCTATCATGTTCTG+GGG | 0.632012 | 7.2:+5322128 | MS.gene07014:intron |
ACAGTGCGTCACATTGTGGA+AGG | 0.639089 | 7.2:+5319234 | MS.gene07014:CDS |
TTCTGTAGTGATATCAGCAG+CGG | 0.640815 | 7.2:-5324438 | None:intergenic |
TGCTACAGTGCGTCACATTG+TGG | 0.642347 | 7.2:+5319230 | MS.gene07014:CDS |
CTTTCTCAGTGATTCTGACG+GGG | 0.642676 | 7.2:+5324472 | MS.gene07014:CDS |
TGTAAATTTGAAGGGCAAAG+GGG | 0.645718 | 7.2:+5324673 | MS.gene07014:CDS |
ACATACGGCTATGTCTGAAG+TGG | 0.647289 | 7.2:-5325182 | None:intergenic |
AAATCCTGAAGATTATGCAA+AGG | 0.647444 | 7.2:+5321284 | MS.gene07014:CDS |
AGTAGCTCCAAACATAAAAG+GGG | 0.650201 | 7.2:+5324527 | MS.gene07014:CDS |
CCCTTCTATATTGTGCCATG+AGG | 0.650407 | 7.2:-5324801 | None:intergenic |
TCTAGCATTCAAGAACGCCA+TGG | 0.653651 | 7.2:-5325593 | None:intergenic |
TCAATCACAGTAGCACCTTG+AGG | 0.657313 | 7.2:-5323160 | None:intergenic |
TCTAGAGTAGATCAAATACC+GGG | 0.659498 | 7.2:+5325522 | MS.gene07014:CDS |
GTTGTATGCATAGACCGAAG+AGG | 0.660812 | 7.2:+5324845 | MS.gene07014:CDS |
TAGCCAGAAACATTTGCCGA+AGG | 0.661863 | 7.2:-5319454 | None:intergenic |
GACCAGGCTGAGGTTGATGG+CGG | 0.663709 | 7.2:+5325331 | MS.gene07014:intron |
ACTTGGCGTCACACTTCACG+AGG | 0.666144 | 7.2:+5318495 | MS.gene07014:CDS |
GTAGACCATCCCAAAACACC+CGG | 0.672266 | 7.2:-5325540 | None:intergenic |
TGTTCAAGATGTGAAAGCAG+AGG | 0.675037 | 7.2:+5319430 | MS.gene07014:CDS |
TACCTCCCACAAACTTCCAG+GGG | 0.676489 | 7.2:-5318611 | None:intergenic |
GTTTCTGGCTATGACAGAGG+AGG | 0.682217 | 7.2:+5319466 | MS.gene07014:CDS |
CATAGCCGTATGTTCTTGTG+TGG | 0.682854 | 7.2:+5325192 | MS.gene07014:CDS |
AAATGGATTTGATAGCTGAG+AGG | 0.682911 | 7.2:+5322577 | MS.gene07014:CDS |
CCAACTAGGTGTCAAAGCTG+GGG | 0.684172 | 7.2:+5319378 | MS.gene07014:intron |
CCAAGCCTGATGGAAAACCA+TGG | 0.686242 | 7.2:+5325576 | MS.gene07014:CDS |
TCAACCGGATGAATGATGAA+GGG | 0.689425 | 7.2:-5318984 | None:intergenic |
GTAGCTCCAAACATAAAAGG+GGG | 0.697648 | 7.2:+5324528 | MS.gene07014:CDS |
GTTGGAAGTGCAGTGCCCAG+TGG | 0.700189 | 7.2:+5322645 | MS.gene07014:CDS |
GGTTGCAACATGCTAAAACA+CGG | 0.702738 | 7.2:+5324247 | MS.gene07014:CDS |
TTGGCATTTAAAGCTCACGA+TGG | 0.719107 | 7.2:+5318939 | MS.gene07014:CDS |
CTTGGCGTCACACTTCACGA+GGG | 0.722443 | 7.2:+5318496 | MS.gene07014:CDS |
ATGGATTTGATAGCTGAGAG+GGG | 0.725531 | 7.2:+5322579 | MS.gene07014:CDS |
GATGGTCAGAAAAGACGCAG+CGG | 0.742743 | 7.2:+5318957 | MS.gene07014:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 5317532 | 5325614 | 5317532 | ID=MS.gene07014 |
chr7.2 | mRNA | 5317532 | 5325614 | 5317532 | ID=MS.gene07014.t1;Parent=MS.gene07014 |
chr7.2 | exon | 5317532 | 5317582 | 5317532 | ID=MS.gene07014.t1.exon1;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5317532 | 5317582 | 5317532 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5318451 | 5318630 | 5318451 | ID=MS.gene07014.t1.exon2;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5318451 | 5318630 | 5318451 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5318755 | 5318820 | 5318755 | ID=MS.gene07014.t1.exon3;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5318755 | 5318820 | 5318755 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5318939 | 5319031 | 5318939 | ID=MS.gene07014.t1.exon4;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5318939 | 5319031 | 5318939 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5319135 | 5319266 | 5319135 | ID=MS.gene07014.t1.exon5;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5319135 | 5319266 | 5319135 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5319386 | 5319487 | 5319386 | ID=MS.gene07014.t1.exon6;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5319386 | 5319487 | 5319386 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5319605 | 5319682 | 5319605 | ID=MS.gene07014.t1.exon7;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5319605 | 5319682 | 5319605 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5320979 | 5321050 | 5320979 | ID=MS.gene07014.t1.exon8;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5320979 | 5321050 | 5320979 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5321252 | 5321359 | 5321252 | ID=MS.gene07014.t1.exon9;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5321252 | 5321359 | 5321252 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5321525 | 5321622 | 5321525 | ID=MS.gene07014.t1.exon10;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5321525 | 5321622 | 5321525 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5321804 | 5321864 | 5321804 | ID=MS.gene07014.t1.exon11;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5321804 | 5321864 | 5321804 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5321967 | 5322029 | 5321967 | ID=MS.gene07014.t1.exon12;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5321967 | 5322029 | 5321967 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5322130 | 5322186 | 5322130 | ID=MS.gene07014.t1.exon13;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5322130 | 5322186 | 5322130 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5322308 | 5322409 | 5322308 | ID=MS.gene07014.t1.exon14;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5322308 | 5322409 | 5322308 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5322564 | 5322722 | 5322564 | ID=MS.gene07014.t1.exon15;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5322564 | 5322722 | 5322564 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5322880 | 5323011 | 5322880 | ID=MS.gene07014.t1.exon16;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5322880 | 5323011 | 5322880 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5323148 | 5323234 | 5323148 | ID=MS.gene07014.t1.exon17;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5323148 | 5323234 | 5323148 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5323344 | 5323415 | 5323344 | ID=MS.gene07014.t1.exon18;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5323344 | 5323415 | 5323344 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5324207 | 5324293 | 5324207 | ID=MS.gene07014.t1.exon19;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5324207 | 5324293 | 5324207 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5324413 | 5324866 | 5324413 | ID=MS.gene07014.t1.exon20;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5324413 | 5324866 | 5324413 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5325152 | 5325213 | 5325152 | ID=MS.gene07014.t1.exon21;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5325152 | 5325213 | 5325152 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5325337 | 5325405 | 5325337 | ID=MS.gene07014.t1.exon22;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5325337 | 5325405 | 5325337 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
chr7.2 | exon | 5325510 | 5325614 | 5325510 | ID=MS.gene07014.t1.exon23;Parent=MS.gene07014.t1 |
chr7.2 | CDS | 5325510 | 5325614 | 5325510 | ID=cds.MS.gene07014.t1;Parent=MS.gene07014.t1 |
Gene Sequence |
Protein sequence |