Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20093.t1 | XP_013448269.1 | 99.3 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 3.50E-248 | 867.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20093.t1 | Q9FKS8 | 83.8 | 437 | 69 | 1 | 2 | 436 | 10 | 446 | 1.7e-214 | 746.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20093.t1 | A0A072TYP2 | 99.3 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 2.5e-248 | 867.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049259 | MS.gene20093 | 0.808262 | 3.38E-50 | -1.69E-46 |
MS.gene049634 | MS.gene20093 | 0.823777 | 1.15E-53 | -1.69E-46 |
MS.gene04986 | MS.gene20093 | 0.820334 | 7.25E-53 | -1.69E-46 |
MS.gene05015 | MS.gene20093 | 0.812778 | 3.57E-51 | -1.69E-46 |
MS.gene050173 | MS.gene20093 | 0.815476 | 9.07E-52 | -1.69E-46 |
MS.gene050216 | MS.gene20093 | -0.815832 | 7.55E-52 | -1.69E-46 |
MS.gene050381 | MS.gene20093 | 0.849521 | 3.06E-60 | -1.69E-46 |
MS.gene050883 | MS.gene20093 | 0.82238 | 2.44E-53 | -1.69E-46 |
MS.gene051044 | MS.gene20093 | 0.821047 | 4.97E-53 | -1.69E-46 |
MS.gene051127 | MS.gene20093 | 0.829341 | 5.43E-55 | -1.69E-46 |
MS.gene051138 | MS.gene20093 | 0.806216 | 9.16E-50 | -1.69E-46 |
MS.gene052566 | MS.gene20093 | 0.806175 | 9.35E-50 | -1.69E-46 |
MS.gene052802 | MS.gene20093 | 0.815334 | 9.75E-52 | -1.69E-46 |
MS.gene053420 | MS.gene20093 | 0.818946 | 1.50E-52 | -1.69E-46 |
MS.gene053488 | MS.gene20093 | 0.824505 | 7.78E-54 | -1.69E-46 |
MS.gene053561 | MS.gene20093 | 0.865769 | 4.64E-65 | -1.69E-46 |
MS.gene054056 | MS.gene20093 | 0.831033 | 2.10E-55 | -1.69E-46 |
MS.gene054708 | MS.gene20093 | 0.805639 | 1.21E-49 | -1.69E-46 |
MS.gene055124 | MS.gene20093 | 0.853417 | 2.42E-61 | -1.69E-46 |
MS.gene055154 | MS.gene20093 | 0.832332 | 1.00E-55 | -1.69E-46 |
MS.gene055942 | MS.gene20093 | 0.843917 | 1.04E-58 | -1.69E-46 |
MS.gene056311 | MS.gene20093 | 0.816432 | 5.55E-52 | -1.69E-46 |
MS.gene056313 | MS.gene20093 | 0.810153 | 1.33E-50 | -1.69E-46 |
MS.gene057014 | MS.gene20093 | 0.824994 | 5.97E-54 | -1.69E-46 |
MS.gene058093 | MS.gene20093 | 0.803178 | 3.95E-49 | -1.69E-46 |
MS.gene058099 | MS.gene20093 | 0.8109 | 9.16E-51 | -1.69E-46 |
MS.gene058108 | MS.gene20093 | 0.82516 | 5.45E-54 | -1.69E-46 |
MS.gene058109 | MS.gene20093 | 0.836706 | 8.00E-57 | -1.69E-46 |
MS.gene058117 | MS.gene20093 | 0.800564 | 1.36E-48 | -1.69E-46 |
MS.gene058171 | MS.gene20093 | 0.852933 | 3.33E-61 | -1.69E-46 |
MS.gene058173 | MS.gene20093 | 0.843855 | 1.08E-58 | -1.69E-46 |
MS.gene058175 | MS.gene20093 | 0.862143 | 6.24E-64 | -1.69E-46 |
MS.gene058493 | MS.gene20093 | 0.807612 | 4.64E-50 | -1.69E-46 |
MS.gene058628 | MS.gene20093 | 0.810776 | 9.74E-51 | -1.69E-46 |
MS.gene058840 | MS.gene20093 | 0.818728 | 1.68E-52 | -1.69E-46 |
MS.gene05884 | MS.gene20093 | 0.803467 | 3.44E-49 | -1.69E-46 |
MS.gene059045 | MS.gene20093 | 0.809985 | 1.44E-50 | -1.69E-46 |
MS.gene059690 | MS.gene20093 | 0.844829 | 5.93E-59 | -1.69E-46 |
MS.gene059691 | MS.gene20093 | 0.831367 | 1.74E-55 | -1.69E-46 |
MS.gene059694 | MS.gene20093 | 0.845384 | 4.20E-59 | -1.69E-46 |
MS.gene059697 | MS.gene20093 | 0.847214 | 1.33E-59 | -1.69E-46 |
MS.gene059865 | MS.gene20093 | -0.805754 | 1.15E-49 | -1.69E-46 |
MS.gene059943 | MS.gene20093 | 0.81175 | 5.99E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20093.t1 | MTR_7g038910 | 99.307 | 433 | 3 | 0 | 4 | 436 | 11 | 443 | 0.0 | 886 |
MS.gene20093.t1 | MTR_7g038910 | 99.208 | 379 | 3 | 0 | 4 | 382 | 11 | 389 | 0.0 | 773 |
MS.gene20093.t1 | MTR_6g022790 | 84.296 | 433 | 68 | 0 | 4 | 436 | 23 | 455 | 0.0 | 771 |
MS.gene20093.t1 | MTR_2g101920 | 83.641 | 434 | 70 | 1 | 4 | 436 | 28 | 461 | 0.0 | 735 |
MS.gene20093.t1 | MTR_7g038910 | 99.425 | 348 | 2 | 0 | 4 | 351 | 11 | 358 | 0.0 | 711 |
MS.gene20093.t1 | MTR_6g023065 | 80.841 | 428 | 82 | 0 | 9 | 436 | 36 | 463 | 0.0 | 693 |
MS.gene20093.t1 | MTR_6g022780 | 79.767 | 430 | 84 | 2 | 8 | 436 | 1 | 428 | 0.0 | 673 |
MS.gene20093.t1 | MTR_6g023075 | 77.674 | 430 | 93 | 2 | 8 | 436 | 1 | 428 | 0.0 | 659 |
MS.gene20093.t1 | MTR_8g080120 | 67.593 | 432 | 140 | 0 | 5 | 436 | 5 | 436 | 0.0 | 639 |
MS.gene20093.t1 | MTR_2g096830 | 76.815 | 427 | 98 | 1 | 11 | 436 | 2 | 428 | 0.0 | 628 |
MS.gene20093.t1 | MTR_4g103890 | 68.765 | 413 | 129 | 0 | 22 | 434 | 9 | 421 | 0.0 | 618 |
MS.gene20093.t1 | MTR_3g085820 | 74.859 | 354 | 89 | 0 | 5 | 358 | 15 | 368 | 0.0 | 560 |
MS.gene20093.t1 | MTR_5g054730 | 62.963 | 432 | 156 | 1 | 5 | 436 | 12 | 439 | 0.0 | 555 |
MS.gene20093.t1 | MTR_1g093020 | 61.574 | 432 | 162 | 1 | 5 | 436 | 10 | 437 | 0.0 | 544 |
MS.gene20093.t1 | MTR_1g093030 | 61.737 | 426 | 159 | 1 | 11 | 436 | 16 | 437 | 0.0 | 539 |
MS.gene20093.t1 | MTR_0531s0020 | 80.312 | 320 | 63 | 0 | 7 | 326 | 33 | 352 | 0.0 | 528 |
MS.gene20093.t1 | MTR_2g096830 | 75.731 | 342 | 82 | 1 | 11 | 351 | 2 | 343 | 0.0 | 524 |
MS.gene20093.t1 | MTR_1g093020 | 62.843 | 401 | 145 | 1 | 5 | 405 | 10 | 406 | 0.0 | 514 |
MS.gene20093.t1 | MTR_3g005740 | 54.060 | 431 | 194 | 2 | 10 | 436 | 39 | 469 | 9.06e-167 | 477 |
MS.gene20093.t1 | MTR_3g115090 | 37.471 | 435 | 258 | 5 | 15 | 436 | 76 | 509 | 1.05e-94 | 294 |
MS.gene20093.t1 | MTR_2g012470 | 37.358 | 439 | 263 | 5 | 8 | 435 | 80 | 517 | 1.36e-93 | 291 |
MS.gene20093.t1 | MTR_5g023240 | 36.758 | 438 | 255 | 6 | 7 | 432 | 70 | 497 | 1.58e-92 | 289 |
MS.gene20093.t1 | MTR_4g075750 | 34.459 | 444 | 274 | 4 | 9 | 435 | 56 | 499 | 1.53e-88 | 278 |
MS.gene20093.t1 | MTR_5g023260 | 35.666 | 443 | 271 | 6 | 7 | 436 | 91 | 532 | 3.94e-88 | 278 |
MS.gene20093.t1 | MTR_3g110660 | 31.209 | 455 | 260 | 11 | 22 | 433 | 32 | 476 | 1.85e-59 | 202 |
MS.gene20093.t1 | MTR_1g105980 | 31.579 | 456 | 253 | 12 | 24 | 433 | 23 | 465 | 1.72e-58 | 199 |
MS.gene20093.t1 | MTR_4g055610 | 30.735 | 449 | 283 | 11 | 4 | 436 | 24 | 460 | 2.46e-58 | 198 |
MS.gene20093.t1 | MTR_8g099320 | 29.138 | 429 | 282 | 9 | 23 | 436 | 27 | 448 | 2.95e-58 | 197 |
MS.gene20093.t1 | MTR_1g007380 | 31.317 | 463 | 271 | 13 | 10 | 433 | 12 | 466 | 2.31e-55 | 191 |
MS.gene20093.t1 | MTR_1g105995 | 30.000 | 470 | 271 | 13 | 7 | 432 | 8 | 463 | 1.11e-54 | 189 |
MS.gene20093.t1 | MTR_1g492640 | 30.516 | 426 | 275 | 9 | 25 | 436 | 61 | 479 | 6.72e-54 | 187 |
MS.gene20093.t1 | MTR_1g105990 | 31.729 | 457 | 250 | 14 | 24 | 431 | 22 | 465 | 8.20e-54 | 186 |
MS.gene20093.t1 | MTR_3g088475 | 28.913 | 460 | 288 | 10 | 4 | 430 | 18 | 471 | 2.90e-52 | 182 |
MS.gene20093.t1 | MTR_3g088455 | 28.696 | 460 | 288 | 11 | 4 | 430 | 18 | 470 | 8.27e-51 | 179 |
MS.gene20093.t1 | MTR_1g106000 | 28.850 | 461 | 268 | 11 | 24 | 433 | 16 | 467 | 1.22e-50 | 178 |
MS.gene20093.t1 | MTR_3g096800 | 29.792 | 480 | 275 | 13 | 2 | 436 | 12 | 474 | 9.24e-50 | 176 |
MS.gene20093.t1 | MTR_3g461480 | 28.929 | 439 | 270 | 9 | 24 | 426 | 28 | 460 | 5.98e-48 | 171 |
MS.gene20093.t1 | MTR_1g070470 | 29.680 | 438 | 261 | 13 | 23 | 435 | 22 | 437 | 6.63e-48 | 170 |
MS.gene20093.t1 | MTR_4g073520 | 28.850 | 461 | 263 | 13 | 24 | 433 | 60 | 506 | 8.59e-48 | 171 |
MS.gene20093.t1 | MTR_4g073520 | 28.788 | 462 | 264 | 13 | 23 | 433 | 59 | 506 | 1.22e-47 | 171 |
MS.gene20093.t1 | MTR_3g096830 | 29.742 | 427 | 250 | 10 | 5 | 400 | 22 | 429 | 7.70e-47 | 167 |
MS.gene20093.t1 | MTR_5g096840 | 29.638 | 442 | 263 | 13 | 24 | 426 | 30 | 462 | 3.01e-45 | 163 |
MS.gene20093.t1 | MTR_1g007270 | 28.675 | 415 | 259 | 12 | 15 | 400 | 28 | 434 | 2.06e-44 | 161 |
MS.gene20093.t1 | MTR_1g029750 | 28.947 | 418 | 251 | 10 | 24 | 402 | 36 | 446 | 2.45e-43 | 159 |
MS.gene20093.t1 | MTR_3g461440 | 28.706 | 425 | 264 | 11 | 9 | 400 | 11 | 429 | 2.67e-43 | 158 |
MS.gene20093.t1 | MTR_8g094290 | 26.652 | 469 | 282 | 12 | 2 | 432 | 24 | 468 | 5.77e-43 | 157 |
MS.gene20093.t1 | MTR_3g096840 | 28.884 | 457 | 265 | 13 | 24 | 436 | 40 | 480 | 1.41e-42 | 156 |
MS.gene20093.t1 | MTR_3g110660 | 33.333 | 330 | 186 | 9 | 11 | 316 | 23 | 342 | 1.60e-42 | 154 |
MS.gene20093.t1 | MTR_3g461470 | 28.774 | 424 | 265 | 11 | 9 | 400 | 11 | 429 | 3.36e-42 | 155 |
MS.gene20093.t1 | MTR_1g007240 | 27.273 | 462 | 282 | 14 | 15 | 436 | 7 | 454 | 6.50e-42 | 154 |
MS.gene20093.t1 | MTR_3g061390 | 28.678 | 401 | 247 | 9 | 34 | 400 | 34 | 429 | 1.74e-40 | 150 |
MS.gene20093.t1 | MTR_5g096850 | 28.442 | 443 | 267 | 14 | 24 | 426 | 26 | 458 | 2.17e-40 | 150 |
MS.gene20093.t1 | MTR_1g492640 | 30.172 | 348 | 224 | 8 | 101 | 436 | 7 | 347 | 1.54e-39 | 145 |
MS.gene20093.t1 | MTR_3g088465 | 30.890 | 382 | 232 | 14 | 4 | 365 | 18 | 387 | 3.64e-39 | 145 |
MS.gene20093.t1 | MTR_3g110430 | 25.541 | 462 | 301 | 12 | 2 | 425 | 36 | 492 | 7.54e-39 | 147 |
MS.gene20093.t1 | MTR_2g031750 | 25.968 | 439 | 268 | 12 | 24 | 417 | 13 | 439 | 4.03e-37 | 141 |
MS.gene20093.t1 | MTR_3g461430 | 26.065 | 399 | 260 | 9 | 34 | 400 | 41 | 436 | 2.33e-36 | 140 |
MS.gene20093.t1 | MTR_1g007180 | 26.039 | 457 | 285 | 13 | 21 | 436 | 10 | 454 | 6.11e-36 | 138 |
MS.gene20093.t1 | MTR_4g104510 | 27.735 | 393 | 265 | 13 | 51 | 436 | 68 | 448 | 9.37e-36 | 137 |
MS.gene20093.t1 | MTR_4g104510 | 27.296 | 392 | 266 | 12 | 51 | 436 | 68 | 446 | 1.49e-35 | 137 |
MS.gene20093.t1 | MTR_1g492640 | 31.773 | 299 | 186 | 7 | 25 | 312 | 43 | 334 | 2.28e-34 | 132 |
MS.gene20093.t1 | MTR_3g110420 | 24.894 | 470 | 306 | 13 | 5 | 435 | 6 | 467 | 4.06e-34 | 133 |
MS.gene20093.t1 | MTR_1g492640 | 31.773 | 299 | 186 | 7 | 25 | 312 | 61 | 352 | 4.07e-34 | 131 |
MS.gene20093.t1 | MTR_3g085800 | 62.963 | 81 | 30 | 0 | 356 | 436 | 4 | 84 | 2.30e-31 | 115 |
MS.gene20093.t1 | MTR_3g461440 | 28.819 | 288 | 176 | 6 | 136 | 400 | 11 | 292 | 7.77e-31 | 121 |
MS.gene20093.t1 | MTR_5g081630 | 26.531 | 392 | 271 | 12 | 51 | 436 | 1 | 381 | 9.22e-28 | 114 |
MS.gene20093.t1 | MTR_2g031750 | 25.000 | 376 | 228 | 11 | 84 | 417 | 9 | 372 | 1.70e-25 | 107 |
MS.gene20093.t1 | MTR_4g055637 | 31.481 | 216 | 131 | 5 | 231 | 436 | 168 | 376 | 2.83e-22 | 98.2 |
MS.gene20093.t1 | MTR_3g110420 | 25.449 | 334 | 220 | 11 | 5 | 316 | 6 | 332 | 4.31e-21 | 94.4 |
MS.gene20093.t1 | MTR_3g069960 | 26.615 | 387 | 241 | 14 | 69 | 436 | 19 | 381 | 8.92e-21 | 94.0 |
MS.gene20093.t1 | MTR_1g007180 | 24.415 | 299 | 199 | 6 | 162 | 436 | 75 | 370 | 1.26e-20 | 93.2 |
MS.gene20093.t1 | MTR_3g069960 | 26.615 | 387 | 241 | 14 | 69 | 436 | 72 | 434 | 1.45e-20 | 94.0 |
MS.gene20093.t1 | MTR_3g465510 | 24.601 | 439 | 293 | 15 | 3 | 428 | 17 | 430 | 1.68e-20 | 93.6 |
MS.gene20093.t1 | MTR_8g467180 | 23.214 | 392 | 263 | 15 | 21 | 399 | 11 | 377 | 1.64e-19 | 90.5 |
MS.gene20093.t1 | MTR_3g465440 | 23.261 | 417 | 284 | 13 | 25 | 431 | 47 | 437 | 3.50e-19 | 90.9 |
MS.gene20093.t1 | MTR_7g010790 | 25.515 | 388 | 239 | 12 | 22 | 391 | 37 | 392 | 2.22e-18 | 87.4 |
MS.gene20093.t1 | MTR_1g094620 | 25.182 | 413 | 272 | 15 | 8 | 411 | 137 | 521 | 4.56e-18 | 87.0 |
MS.gene20093.t1 | MTR_7g010750 | 25.806 | 403 | 246 | 12 | 9 | 390 | 20 | 390 | 5.97e-18 | 85.9 |
MS.gene20093.t1 | MTR_1g094620 | 25.238 | 420 | 270 | 16 | 8 | 411 | 137 | 528 | 8.80e-18 | 85.9 |
MS.gene20093.t1 | MTR_8g467190 | 22.335 | 394 | 276 | 10 | 15 | 399 | 4 | 376 | 2.11e-17 | 84.0 |
MS.gene20093.t1 | MTR_1g492640 | 28.500 | 200 | 140 | 2 | 25 | 222 | 43 | 241 | 1.08e-16 | 80.1 |
MS.gene20093.t1 | MTR_8g465310 | 21.914 | 397 | 259 | 12 | 15 | 392 | 4 | 368 | 1.92e-16 | 81.3 |
MS.gene20093.t1 | MTR_3g033730 | 25.132 | 378 | 242 | 12 | 31 | 395 | 47 | 396 | 2.09e-16 | 81.3 |
MS.gene20093.t1 | MTR_1g492640 | 28.500 | 200 | 140 | 2 | 25 | 222 | 61 | 259 | 2.54e-16 | 79.3 |
MS.gene20093.t1 | MTR_5g017200 | 31.858 | 226 | 139 | 6 | 34 | 248 | 39 | 260 | 3.23e-16 | 79.0 |
MS.gene20093.t1 | MTR_7g062410 | 22.481 | 387 | 261 | 14 | 21 | 394 | 31 | 391 | 8.25e-16 | 79.3 |
MS.gene20093.t1 | MTR_4g033275 | 33.333 | 96 | 61 | 2 | 313 | 405 | 4 | 99 | 6.53e-12 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20093.t1 | AT5G40780 | 83.753 | 437 | 69 | 1 | 2 | 436 | 10 | 446 | 0.0 | 766 |
MS.gene20093.t1 | AT1G48640 | 78.621 | 435 | 92 | 1 | 2 | 436 | 20 | 453 | 0.0 | 709 |
MS.gene20093.t1 | AT5G40780 | 84.171 | 398 | 63 | 0 | 39 | 436 | 1 | 398 | 0.0 | 701 |
MS.gene20093.t1 | AT5G40780 | 84.171 | 398 | 63 | 0 | 39 | 436 | 1 | 398 | 0.0 | 701 |
MS.gene20093.t1 | AT1G24400 | 78.689 | 427 | 91 | 0 | 10 | 436 | 15 | 441 | 0.0 | 674 |
MS.gene20093.t1 | AT1G67640 | 77.986 | 427 | 94 | 0 | 10 | 436 | 15 | 441 | 0.0 | 654 |
MS.gene20093.t1 | AT1G61270 | 64.679 | 436 | 150 | 2 | 2 | 433 | 10 | 445 | 0.0 | 593 |
MS.gene20093.t1 | AT3G01760 | 64.302 | 437 | 148 | 4 | 2 | 431 | 7 | 442 | 0.0 | 583 |
MS.gene20093.t1 | AT1G25530 | 62.326 | 430 | 162 | 0 | 7 | 436 | 11 | 440 | 0.0 | 539 |
MS.gene20093.t1 | AT1G71680 | 58.199 | 433 | 180 | 1 | 5 | 436 | 16 | 448 | 9.70e-172 | 489 |
MS.gene20093.t1 | AT1G71680 | 58.908 | 348 | 142 | 1 | 5 | 351 | 16 | 363 | 1.76e-142 | 411 |
MS.gene20093.t1 | AT1G47670 | 37.358 | 439 | 263 | 5 | 8 | 435 | 78 | 515 | 1.74e-93 | 291 |
MS.gene20093.t1 | AT4G35180 | 33.813 | 417 | 255 | 8 | 14 | 416 | 48 | 457 | 3.17e-68 | 224 |
MS.gene20093.t1 | AT1G10010 | 32.688 | 465 | 257 | 13 | 12 | 433 | 18 | 469 | 3.54e-60 | 203 |
MS.gene20093.t1 | AT1G10010 | 32.688 | 465 | 257 | 13 | 12 | 433 | 19 | 470 | 5.29e-60 | 203 |
MS.gene20093.t1 | AT1G08230 | 30.649 | 447 | 289 | 8 | 5 | 436 | 9 | 449 | 1.60e-59 | 201 |
MS.gene20093.t1 | AT5G41800 | 29.508 | 427 | 279 | 9 | 25 | 436 | 28 | 447 | 4.14e-58 | 197 |
MS.gene20093.t1 | AT1G58360 | 31.126 | 453 | 260 | 14 | 22 | 432 | 35 | 477 | 1.12e-53 | 186 |
MS.gene20093.t1 | AT4G35180 | 36.594 | 276 | 165 | 4 | 14 | 284 | 48 | 318 | 2.11e-53 | 182 |
MS.gene20093.t1 | AT5G49630 | 30.989 | 455 | 260 | 13 | 22 | 432 | 31 | 475 | 2.87e-48 | 172 |
MS.gene20093.t1 | AT5G09220 | 28.731 | 449 | 272 | 11 | 24 | 432 | 46 | 486 | 4.88e-48 | 171 |
MS.gene20093.t1 | AT5G63850 | 29.111 | 450 | 269 | 12 | 24 | 432 | 19 | 459 | 2.06e-46 | 167 |
MS.gene20093.t1 | AT1G44100 | 28.478 | 460 | 279 | 12 | 15 | 432 | 22 | 473 | 1.40e-45 | 164 |
MS.gene20093.t1 | AT1G77380 | 29.194 | 459 | 280 | 11 | 11 | 432 | 19 | 469 | 2.32e-45 | 164 |
MS.gene20093.t1 | AT1G08230 | 30.704 | 355 | 227 | 7 | 95 | 436 | 1 | 349 | 6.68e-41 | 149 |
MS.gene20093.t1 | AT5G23810 | 28.538 | 424 | 247 | 12 | 22 | 400 | 24 | 436 | 1.76e-38 | 145 |
MS.gene20093.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
MS.gene20093.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
MS.gene20093.t1 | AT1G08230 | 30.816 | 331 | 210 | 7 | 119 | 436 | 6 | 330 | 4.25e-38 | 141 |
MS.gene20093.t1 | AT3G55740 | 27.009 | 448 | 293 | 21 | 5 | 436 | 8 | 437 | 4.94e-27 | 112 |
MS.gene20093.t1 | AT3G55740 | 27.820 | 399 | 257 | 19 | 51 | 436 | 1 | 381 | 1.31e-26 | 110 |
MS.gene20093.t1 | AT3G55740 | 27.820 | 399 | 257 | 19 | 51 | 436 | 1 | 381 | 1.31e-26 | 110 |
MS.gene20093.t1 | AT5G23810 | 28.834 | 326 | 195 | 10 | 22 | 321 | 24 | 338 | 1.57e-26 | 110 |
MS.gene20093.t1 | AT2G36590 | 25.926 | 405 | 282 | 13 | 12 | 408 | 12 | 406 | 3.62e-26 | 110 |
MS.gene20093.t1 | AT2G39890 | 25.566 | 442 | 295 | 17 | 11 | 436 | 17 | 440 | 1.49e-25 | 108 |
MS.gene20093.t1 | AT2G39890 | 25.566 | 442 | 295 | 17 | 11 | 436 | 17 | 440 | 1.49e-25 | 108 |
MS.gene20093.t1 | AT2G39890 | 26.065 | 399 | 264 | 15 | 51 | 436 | 1 | 381 | 1.68e-25 | 107 |
MS.gene20093.t1 | AT5G15240 | 24.318 | 403 | 253 | 12 | 4 | 390 | 17 | 383 | 9.87e-21 | 94.4 |
MS.gene20093.t1 | AT2G36590 | 27.010 | 311 | 211 | 12 | 12 | 316 | 12 | 312 | 1.14e-16 | 81.3 |
MS.gene20093.t1 | AT5G23810 | 28.099 | 242 | 141 | 8 | 22 | 239 | 24 | 256 | 2.63e-15 | 76.3 |
MS.gene20093.t1 | AT5G02170 | 23.274 | 391 | 263 | 12 | 16 | 394 | 125 | 490 | 3.74e-14 | 74.7 |
MS.gene20093.t1 | AT5G02170 | 23.822 | 382 | 243 | 11 | 16 | 394 | 125 | 461 | 4.26e-14 | 74.3 |
MS.gene20093.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
MS.gene20093.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
MS.gene20093.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
MS.gene20093.t1 | AT3G28960 | 21.447 | 387 | 249 | 12 | 25 | 391 | 15 | 366 | 5.50e-14 | 73.9 |
MS.gene20093.t1 | AT3G09340 | 23.387 | 372 | 255 | 12 | 31 | 394 | 139 | 488 | 7.73e-14 | 73.9 |
MS.gene20093.t1 | AT3G09330 | 23.387 | 372 | 255 | 12 | 31 | 394 | 139 | 488 | 1.47e-13 | 72.8 |
MS.gene20093.t1 | AT2G39130 | 22.807 | 399 | 271 | 15 | 6 | 394 | 142 | 513 | 1.13e-12 | 70.1 |
MS.gene20093.t1 | AT2G39130 | 22.807 | 399 | 271 | 15 | 6 | 394 | 142 | 513 | 1.13e-12 | 70.1 |
MS.gene20093.t1 | AT2G41190 | 22.500 | 400 | 287 | 9 | 33 | 428 | 154 | 534 | 1.68e-12 | 69.7 |
MS.gene20093.t1 | AT2G41190 | 24.405 | 336 | 231 | 9 | 33 | 364 | 154 | 470 | 1.81e-11 | 66.2 |
MS.gene20093.t1 | AT3G11900 | 20.244 | 410 | 288 | 11 | 36 | 426 | 41 | 430 | 3.50e-11 | 65.1 |
MS.gene20093.t1 | AT3G11900 | 20.244 | 410 | 288 | 11 | 36 | 426 | 41 | 430 | 3.50e-11 | 65.1 |
MS.gene20093.t1 | AT2G39130 | 23.118 | 372 | 249 | 15 | 6 | 367 | 142 | 486 | 9.65e-11 | 63.9 |
Find 86 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAACTTGAACTCTATTTC+TGG | 0.163457 | 7.3:-60698670 | MS.gene20093:CDS |
CAGTTGCTCTCATTGGTTAT+TGG | 0.237858 | 7.3:-60698198 | MS.gene20093:CDS |
AATCATAATTCTTCGCATTA+AGG | 0.237872 | 7.3:+60697020 | None:intergenic |
GTTATAGAAAATGTTGATTA+TGG | 0.261549 | 7.3:-60698418 | MS.gene20093:CDS |
GCATTTCTTGACGAACTAAT+TGG | 0.266230 | 7.3:+60699872 | None:intergenic |
CTCATTGGTTATTGGATGTT+TGG | 0.296914 | 7.3:-60698190 | MS.gene20093:CDS |
TTTGTTGTTATCCATGTTAT+TGG | 0.301091 | 7.3:-60698097 | MS.gene20093:CDS |
CCAGAAATAGAGTTCAAGTT+AGG | 0.313363 | 7.3:+60698670 | None:intergenic |
TACTTTCCAGTTGCTCTCAT+TGG | 0.318123 | 7.3:-60698205 | MS.gene20093:CDS |
ACTACCCCAGGAACTGTCTT+TGG | 0.323215 | 7.3:-60698382 | MS.gene20093:CDS |
GCCATTGCAATAAGCCAGTT+TGG | 0.358796 | 7.3:+60698127 | None:intergenic |
TTTGGTTTCTTCAATGCCCT+TGG | 0.367776 | 7.3:-60698364 | MS.gene20093:CDS |
GGAGATTCAGCTTGTCTTGG+TGG | 0.374415 | 7.3:-60697527 | MS.gene20093:CDS |
AAGAAACCAAAGACAGTTCC+TGG | 0.375264 | 7.3:+60698376 | None:intergenic |
TAGCTTACAAAGTATGTTGT+TGG | 0.377102 | 7.3:+60697665 | None:intergenic |
TCATCACATTATACACGTTA+TGG | 0.383988 | 7.3:-60698963 | MS.gene20093:CDS |
CCAAGTTGCGCCATGGCATA+AGG | 0.384842 | 7.3:+60699785 | None:intergenic |
AACATTGTCTACATGGTAAC+TGG | 0.392632 | 7.3:-60698805 | MS.gene20093:CDS |
GAACTGGGTCAATATGCTTT+TGG | 0.394335 | 7.3:-60698886 | MS.gene20093:CDS |
CAATAACCAATGAGAGCAAC+TGG | 0.394586 | 7.3:+60698199 | None:intergenic |
GTTCGTCAAGAAATGCAAAA+TGG | 0.402237 | 7.3:-60699865 | MS.gene20093:CDS |
GTTTCAATCATGTCAAATAC+TGG | 0.407218 | 7.3:+60697943 | None:intergenic |
GCACAAAGCTACAACTATAT+AGG | 0.415908 | 7.3:+60698228 | None:intergenic |
CTCCACATAGGACCCTTAGA+TGG | 0.416492 | 7.3:+60698265 | None:intergenic |
ATTATACACGTTATGGCAAA+TGG | 0.419864 | 7.3:-60698956 | MS.gene20093:CDS |
CTTCAATGCCCTTGGAGATG+TGG | 0.427219 | 7.3:-60698356 | MS.gene20093:CDS |
ATTGACCTCAATCCTCCAAT+AGG | 0.449419 | 7.3:+60697046 | None:intergenic |
CAACAACTTATTGTTGAAGT+TGG | 0.451243 | 7.3:-60698832 | MS.gene20093:CDS |
CAGTTACTCTACAATTGCTT+GGG | 0.463934 | 7.3:-60698461 | MS.gene20093:CDS |
TATCACCTATTGGAGGATTG+AGG | 0.465217 | 7.3:-60697051 | MS.gene20093:CDS |
GCAGTTACTCTACAATTGCT+TGG | 0.470215 | 7.3:-60698462 | MS.gene20093:intron |
ATATAGGTTTGCATTGTGCT+TGG | 0.474894 | 7.3:-60697091 | MS.gene20093:intron |
CCGCCGCTATCATGTCGTTA+AGG | 0.476124 | 7.3:-60698636 | MS.gene20093:intron |
CCTTATGCCATGGCGCAACT+TGG | 0.477863 | 7.3:-60699785 | MS.gene20093:CDS |
TGGGCAGCTTCTGCTCATAA+AGG | 0.483954 | 7.3:-60698442 | MS.gene20093:CDS |
CACAATGTTACTGCCATGGT+TGG | 0.488589 | 7.3:-60699827 | MS.gene20093:CDS |
CAGAAATAGAGTTCAAGTTA+GGG | 0.490914 | 7.3:+60698671 | None:intergenic |
CCATGTTATTGGAAGCTACC+AGG | 0.495046 | 7.3:-60698086 | MS.gene20093:intron |
TATTGTACGAAATGTGTATG+TGG | 0.498916 | 7.3:-60697872 | MS.gene20093:CDS |
CAAGACAAGCTGAATCTCCT+TGG | 0.500865 | 7.3:+60697531 | None:intergenic |
CAAGGAGATTCAGCTTGTCT+TGG | 0.504542 | 7.3:-60697530 | MS.gene20093:CDS |
CAAGTTGCGCCATGGCATAA+GGG | 0.504930 | 7.3:+60699786 | None:intergenic |
TGACTTTAGAGAAACCAAAC+TGG | 0.513027 | 7.3:-60698141 | MS.gene20093:CDS |
TGGTGTTAACATTGTCTACA+TGG | 0.520753 | 7.3:-60698812 | MS.gene20093:CDS |
ATGCCATGGCGCAACTTGGA+TGG | 0.528431 | 7.3:-60699781 | MS.gene20093:intron |
CCTGGTAGCTTCCAATAACA+TGG | 0.529595 | 7.3:+60698086 | None:intergenic |
GTTACTGCCATGGTTGGAGC+TGG | 0.535918 | 7.3:-60699821 | MS.gene20093:CDS |
ATTGTACGAAATGTGTATGT+GGG | 0.542188 | 7.3:-60697871 | MS.gene20093:intron |
TCTTAGTCTCCCTTATGCCA+TGG | 0.544235 | 7.3:-60699795 | MS.gene20093:CDS |
GTGTAGATGGAATTGTTGCT+TGG | 0.553420 | 7.3:+60698296 | None:intergenic |
TTCAGCTACCATGCATAATG+TGG | 0.558234 | 7.3:-60697569 | MS.gene20093:intron |
AATGGTTGAGATGCATGAAA+TGG | 0.559811 | 7.3:-60698938 | MS.gene20093:CDS |
ACCAAACTGGCTTATTGCAA+TGG | 0.571650 | 7.3:-60698128 | MS.gene20093:CDS |
TACAAAGCTACGACTACCCC+AGG | 0.575799 | 7.3:-60698394 | MS.gene20093:CDS |
TAACAGTATTAGTCCTCTCA+TGG | 0.577651 | 7.3:-60698987 | MS.gene20093:CDS |
AAGCAAAAGCCACATCTCCA+AGG | 0.583498 | 7.3:+60698347 | None:intergenic |
GAGATGCATGAAATGGTACC+CGG | 0.589392 | 7.3:-60698931 | MS.gene20093:CDS |
CAACCATGGCAGTAACATTG+TGG | 0.590369 | 7.3:+60699828 | None:intergenic |
GGCTTGCAATATACAAGCCA+AGG | 0.591776 | 7.3:-60697548 | MS.gene20093:CDS |
ATAAAACGCAACATTGTGGT+AGG | 0.595326 | 7.3:+60697892 | None:intergenic |
AGAAACCAAAGACAGTTCCT+GGG | 0.601129 | 7.3:+60698377 | None:intergenic |
TACAATAAAACGCAACATTG+TGG | 0.602420 | 7.3:+60697888 | None:intergenic |
ACAATCACTCCTCTCCACAT+AGG | 0.605359 | 7.3:+60698253 | None:intergenic |
AAGAACACCAGCTCCAACCA+TGG | 0.608052 | 7.3:+60699814 | None:intergenic |
CTAAGATAAAGACATGCACT+TGG | 0.610150 | 7.3:-60700507 | None:intergenic |
AACCATCTAAGGGTCCTATG+TGG | 0.613202 | 7.3:-60698267 | MS.gene20093:CDS |
AGGACTAATACTGTTACTCC+AGG | 0.615520 | 7.3:+60698994 | None:intergenic |
AGCAAAAGCCACATCTCCAA+GGG | 0.623365 | 7.3:+60698348 | None:intergenic |
AAATAGAGTTCAAGTTAGGG+AGG | 0.624445 | 7.3:+60698674 | None:intergenic |
ATTGCAAGCCACATTATGCA+TGG | 0.627374 | 7.3:+60697561 | None:intergenic |
ATACCATCCAAGTTGCGCCA+TGG | 0.632975 | 7.3:+60699778 | None:intergenic |
ATTCCACAATGTTACTGCCA+TGG | 0.635834 | 7.3:-60699831 | MS.gene20093:CDS |
ACTTCAACAATAAGTTGTTG+TGG | 0.635960 | 7.3:+60698835 | None:intergenic |
AGCAACAATTCCATCTACAC+CGG | 0.636630 | 7.3:-60698293 | MS.gene20093:CDS |
TTTGATAGATATCATGAACT+GGG | 0.640129 | 7.3:-60698901 | MS.gene20093:CDS |
CGTCAAGAAATGCAAAATGG+TGG | 0.644321 | 7.3:-60699862 | MS.gene20093:CDS |
TGACATGATTGAAACAGTGA+TGG | 0.651752 | 7.3:-60697935 | MS.gene20093:CDS |
TGCTTATGCTGGACACAACG+TGG | 0.655602 | 7.3:-60698329 | MS.gene20093:CDS |
GTGAGACAAGACAAAGTGAA+CGG | 0.655631 | 7.3:+60698696 | None:intergenic |
GTACCTTAACGACATGATAG+CGG | 0.661138 | 7.3:+60698633 | None:intergenic |
ATTGTCTACATGGTAACTGG+AGG | 0.663381 | 7.3:-60698802 | MS.gene20093:CDS |
TCTAAGGGTCCTATGTGGAG+AGG | 0.663638 | 7.3:-60698262 | MS.gene20093:CDS |
GAAACCAAAGACAGTTCCTG+GGG | 0.694600 | 7.3:+60698378 | None:intergenic |
ATAATGTGATGAACCATGAG+AGG | 0.706479 | 7.3:+60698974 | None:intergenic |
AGACAAGACAAAGTGAACGG+AGG | 0.734305 | 7.3:+60698699 | None:intergenic |
CCTTAACGACATGATAGCGG+CGG | 0.739980 | 7.3:+60698636 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATATGTCAATTTATAT+TGG | + | chr7.3:60699727-60699746 | None:intergenic | 10.0% |
!! | CAAAAATTAACTTAAAAATA+AGG | + | chr7.3:60697999-60698018 | None:intergenic | 10.0% |
!!! | AAAAAATTCTAATTTTGTTT+AGG | - | chr7.3:60698166-60698185 | MS.gene20093:CDS | 10.0% |
!!! | AAAAGTTGATATATTTTATA+GGG | - | chr7.3:60698342-60698361 | MS.gene20093:CDS | 10.0% |
!!! | AAGTTTTTATAAAAAAAGAA+GGG | + | chr7.3:60699487-60699506 | None:intergenic | 10.0% |
!!! | AATACATTTTCATATATTTT+AGG | - | chr7.3:60697836-60697855 | MS.gene20093:intron | 10.0% |
!!! | ATACATTTTCATATATTTTA+GGG | - | chr7.3:60697837-60697856 | MS.gene20093:intron | 10.0% |
!!! | ATTAAATCGTATTTTTTTAA+GGG | - | chr7.3:60700039-60700058 | MS.gene20093:intron | 10.0% |
!!! | GTTAAAAAATTCTAATTTTT+TGG | + | chr7.3:60698076-60698095 | None:intergenic | 10.0% |
!!! | TAAAAAATTCTAATTTTTTG+GGG | + | chr7.3:60698074-60698093 | None:intergenic | 10.0% |
!!! | TAAGTTTTTATAAAAAAAGA+AGG | + | chr7.3:60699488-60699507 | None:intergenic | 10.0% |
!! | AAATAAAAAAATTACACACA+TGG | - | chr7.3:60697346-60697365 | MS.gene20093:intron | 15.0% |
!! | ACAAAATTCTGAATATTTAT+AGG | + | chr7.3:60700083-60700102 | None:intergenic | 15.0% |
!! | CAAAATTCTGAATATTTATA+GGG | + | chr7.3:60700082-60700101 | None:intergenic | 15.0% |
!! | GAAAAATTGGTATATTTATA+GGG | + | chr7.3:60697908-60697927 | None:intergenic | 15.0% |
!!! | AAAACATTTTTTTTTAGAGA+TGG | + | chr7.3:60697881-60697900 | None:intergenic | 15.0% |
!!! | AAAAGTGATTTTATTTTGTA+AGG | + | chr7.3:60700113-60700132 | None:intergenic | 15.0% |
!!! | AAACATTTTTTTTTAGAGAT+GGG | + | chr7.3:60697880-60697899 | None:intergenic | 15.0% |
!!! | AAAGTGTTATTTTATTTTGT+AGG | - | chr7.3:60700268-60700287 | MS.gene20093:intron | 15.0% |
!!! | AAGTGTTATTTTATTTTGTA+GGG | - | chr7.3:60700269-60700288 | MS.gene20093:intron | 15.0% |
!!! | ATTAAGTTTTTTCATTTGAT+AGG | + | chr7.3:60697137-60697156 | None:intergenic | 15.0% |
!!! | ATTGTATTTTATTTTGTAAG+GGG | - | chr7.3:60697434-60697453 | MS.gene20093:intron | 15.0% |
!!! | CATTAAATCGTATTTTTTTA+AGG | - | chr7.3:60700038-60700057 | MS.gene20093:intron | 15.0% |
!!! | CGTTTTGATTTTTTATTTTT+CGG | - | chr7.3:60697537-60697556 | MS.gene20093:CDS | 15.0% |
!!! | CTTTTTTTCATTGATAATAT+AGG | - | chr7.3:60700396-60700415 | MS.gene20093:intron | 15.0% |
!!! | GAAAAGTTGATATATTTTAT+AGG | - | chr7.3:60698341-60698360 | MS.gene20093:CDS | 15.0% |
!!! | GATTGTATTTTATTTTGTAA+GGG | - | chr7.3:60697433-60697452 | MS.gene20093:intron | 15.0% |
!!! | GTTTTGATTTTTTATTTTTC+GGG | - | chr7.3:60697538-60697557 | MS.gene20093:CDS | 15.0% |
!!! | TAGTGATTGAAAATTTTATA+GGG | + | chr7.3:60697968-60697987 | None:intergenic | 15.0% |
!!! | TTTATTTTTTAATAAGAACC+TGG | - | chr7.3:60700367-60700386 | MS.gene20093:intron | 15.0% |
!! | AATGAAAAAAAGATTAAACC+AGG | + | chr7.3:60700388-60700407 | None:intergenic | 20.0% |
!! | AGATTGATGAAAAATTAAAG+AGG | - | chr7.3:60697584-60697603 | MS.gene20093:intron | 20.0% |
!! | ATTCATTGGACATAAAATAT+AGG | + | chr7.3:60698386-60698405 | None:intergenic | 20.0% |
!! | CGAAAAATTGGTATATTTAT+AGG | + | chr7.3:60697909-60697928 | None:intergenic | 20.0% |
!! | GATAAAACAACTTCAATTAA+TGG | - | chr7.3:60699899-60699918 | MS.gene20093:CDS | 20.0% |
!! | TAACAAAGTAAAATACAATC+CGG | - | chr7.3:60697204-60697223 | MS.gene20093:intron | 20.0% |
!! | TGCTGATGAAAAAATTTATA+AGG | + | chr7.3:60700140-60700159 | None:intergenic | 20.0% |
!! | TGTTATCAAACCAATAAAAA+AGG | - | chr7.3:60697485-60697504 | MS.gene20093:intron | 20.0% |
!! | TTCATTGGACATAAAATATA+GGG | + | chr7.3:60698385-60698404 | None:intergenic | 20.0% |
!!! | AAAAAACTTAATAGCTGTTT+TGG | - | chr7.3:60697145-60697164 | MS.gene20093:intron | 20.0% |
!!! | AAAATTTCCATCAACATTTT+TGG | - | chr7.3:60700208-60700227 | MS.gene20093:intron | 20.0% |
!!! | AAGTTAAAGGAAAATTTTAG+AGG | + | chr7.3:60697940-60697959 | None:intergenic | 20.0% |
!!! | ACATTTTCCTTAAACATTTT+AGG | + | chr7.3:60700236-60700255 | None:intergenic | 20.0% |
!!! | AGTTAAAGGAAAATTTTAGA+GGG | + | chr7.3:60697939-60697958 | None:intergenic | 20.0% |
!!! | ATGAAGATGGAAAATTTTAT+AGG | - | chr7.3:60698280-60698299 | MS.gene20093:CDS | 20.0% |
!!! | ATTGTATTTTACTTTGTTAG+AGG | + | chr7.3:60697203-60697222 | None:intergenic | 20.0% |
!!! | CATTTTCCTTAAACATTTTA+GGG | + | chr7.3:60700235-60700254 | None:intergenic | 20.0% |
!!! | GCTGATAGAAAATTTTTATA+GGG | + | chr7.3:60700171-60700190 | None:intergenic | 20.0% |
!!! | GGATTGTATTTTATTTTGTA+AGG | - | chr7.3:60697432-60697451 | MS.gene20093:intron | 20.0% |
!!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr7.3:60697969-60697988 | None:intergenic | 20.0% |
!!! | GTTATAGAAAATGTTGATTA+TGG | - | chr7.3:60699085-60699104 | MS.gene20093:intron | 20.0% |
!!! | TAACAATTTTTGAGATTCAT+TGG | + | chr7.3:60698400-60698419 | None:intergenic | 20.0% |
!!! | TATAGGGTTAAATATGTTTT+TGG | + | chr7.3:60698369-60698388 | None:intergenic | 20.0% |
!!! | TCATATTGATTGATTAAAGA+CGG | + | chr7.3:60698923-60698942 | None:intergenic | 20.0% |
!!! | TGCTGATAGAAAATTTTTAT+AGG | + | chr7.3:60700172-60700191 | None:intergenic | 20.0% |
!!! | TTGTATTTTACTTTGTTAGA+GGG | + | chr7.3:60697202-60697221 | None:intergenic | 20.0% |
!!! | TTTAGGGTTAAATATGTTTT+TGG | - | chr7.3:60697853-60697872 | MS.gene20093:intron | 20.0% |
!!! | TTTCTTATGTCCTTTTTTAT+TGG | + | chr7.3:60697498-60697517 | None:intergenic | 20.0% |
! | AAATGGAGTTAACAAATGAA+TGG | + | chr7.3:60698899-60698918 | None:intergenic | 25.0% |
! | AAGGACATAAGAAATTCATT+TGG | - | chr7.3:60697504-60697523 | MS.gene20093:intron | 25.0% |
! | AATCATAATTCTTCGCATTA+AGG | + | chr7.3:60700486-60700505 | None:intergenic | 25.0% |
! | AGTTGAAGGAAAAATTTAGA+TGG | - | chr7.3:60698310-60698329 | MS.gene20093:CDS | 25.0% |
! | TTATAGGAACTAAAAGTTGA+AGG | - | chr7.3:60698296-60698315 | MS.gene20093:CDS | 25.0% |
! | TTATAGGGACTAAAAGTTAA+AGG | + | chr7.3:60697953-60697972 | None:intergenic | 25.0% |
! | TTTCATTTGATAGGTACTAA+AGG | + | chr7.3:60697128-60697147 | None:intergenic | 25.0% |
! | TTTGATAGATATCATGAACT+GGG | - | chr7.3:60698602-60698621 | MS.gene20093:intron | 25.0% |
!! | AATTTACAATGTGTTTTCAG+GGG | - | chr7.3:60698485-60698504 | MS.gene20093:intron | 25.0% |
!! | ATATCTATCAAAACGTTTTC+CGG | + | chr7.3:60698594-60698613 | None:intergenic | 25.0% |
!! | CATATGAGTTTACTTTAAAG+AGG | - | chr7.3:60698249-60698268 | MS.gene20093:CDS | 25.0% |
!! | GAATTTACAATGTGTTTTCA+GGG | - | chr7.3:60698484-60698503 | MS.gene20093:intron | 25.0% |
!! | TTTTGATAGATATCATGAAC+TGG | - | chr7.3:60698601-60698620 | MS.gene20093:intron | 25.0% |
!!! | CAATTTGATTTTTTTGCAGT+CGG | + | chr7.3:60698762-60698781 | None:intergenic | 25.0% |
!!! | GCAATTTTTTGATTCTTAAG+AGG | + | chr7.3:60697171-60697190 | None:intergenic | 25.0% |
!!! | TATTGGTTTGATAACAGTTT+TGG | + | chr7.3:60697481-60697500 | None:intergenic | 25.0% |
!!! | TTTGTTGTTATCCATGTTAT+TGG | - | chr7.3:60699406-60699425 | MS.gene20093:intron | 25.0% |
ACAGAACTGCGAATATTTAT+AGG | - | chr7.3:60700296-60700315 | MS.gene20093:intron | 30.0% | |
ACTTCAACAATAAGTTGTTG+TGG | + | chr7.3:60698671-60698690 | None:intergenic | 30.0% | |
AGAGGAACAAAAAATGAAGA+TGG | - | chr7.3:60698267-60698286 | MS.gene20093:CDS | 30.0% | |
ATTATACACGTTATGGCAAA+TGG | - | chr7.3:60698547-60698566 | MS.gene20093:intron | 30.0% | |
ATTGTACGAAATGTGTATGT+GGG | - | chr7.3:60699632-60699651 | MS.gene20093:intron | 30.0% | |
CAACAACTTATTGTTGAAGT+TGG | - | chr7.3:60698671-60698690 | MS.gene20093:CDS | 30.0% | |
CAGAACTGCGAATATTTATA+GGG | - | chr7.3:60700297-60700316 | MS.gene20093:intron | 30.0% | |
GAGGGATTAAAACGAAAAAT+TGG | + | chr7.3:60697921-60697940 | None:intergenic | 30.0% | |
GATTGATTAAAGACGGTAAA+TGG | + | chr7.3:60698916-60698935 | None:intergenic | 30.0% | |
GTTTCAATCATGTCAAATAC+TGG | + | chr7.3:60699563-60699582 | None:intergenic | 30.0% | |
TACAATAAAACGCAACATTG+TGG | + | chr7.3:60699618-60699637 | None:intergenic | 30.0% | |
TAGCTTACAAAGTATGTTGT+TGG | + | chr7.3:60699841-60699860 | None:intergenic | 30.0% | |
TATCACTTTCCATGAAGTTT+GGG | - | chr7.3:60697039-60697058 | MS.gene20093:CDS | 30.0% | |
TATTGTACGAAATGTGTATG+TGG | - | chr7.3:60699631-60699650 | MS.gene20093:intron | 30.0% | |
TCATCACATTATACACGTTA+TGG | - | chr7.3:60698540-60698559 | MS.gene20093:intron | 30.0% | |
TTATCACTTTCCATGAAGTT+TGG | - | chr7.3:60697038-60697057 | MS.gene20093:CDS | 30.0% | |
TTTGGTCCCTAAAATGTTTA+AGG | - | chr7.3:60700226-60700245 | MS.gene20093:intron | 30.0% | |
! | ATATGCTTTTGGTGAAAAGT+TGG | - | chr7.3:60698628-60698647 | MS.gene20093:intron | 30.0% |
! | CAATTGTGTATTTGTTGAGT+TGG | - | chr7.3:60698462-60698481 | MS.gene20093:intron | 30.0% |
! | CAGAAATAGAGTTCAAGTTA+GGG | + | chr7.3:60698835-60698854 | None:intergenic | 30.0% |
! | GGAATTTACAATGTGTTTTC+AGG | - | chr7.3:60698483-60698502 | MS.gene20093:intron | 30.0% |
! | TATCTATCAAAACGTTTTCC+GGG | + | chr7.3:60698593-60698612 | None:intergenic | 30.0% |
! | TATGCTTTTGGTGAAAAGTT+GGG | - | chr7.3:60698629-60698648 | MS.gene20093:intron | 30.0% |
! | TTGATGCTTTTATCACCTAT+TGG | - | chr7.3:60700442-60700461 | MS.gene20093:intron | 30.0% |
!! | AACATTGACTTGGTCAAAAT+TGG | + | chr7.3:60697269-60697288 | None:intergenic | 30.0% |
!! | GCTATTACTTTTCCGTTTTT+CGG | - | chr7.3:60699778-60699797 | MS.gene20093:intron | 30.0% |
!! | GTTGATGGAAATTTTTGACA+AGG | + | chr7.3:60700203-60700222 | None:intergenic | 30.0% |
AACATTGTCTACATGGTAAC+TGG | - | chr7.3:60698698-60698717 | MS.gene20093:CDS | 35.0% | |
AAGCAATTGTAGAGTAACTG+CGG | + | chr7.3:60699042-60699061 | None:intergenic | 35.0% | |
AATGGTTGAGATGCATGAAA+TGG | - | chr7.3:60698565-60698584 | MS.gene20093:intron | 35.0% | |
ATAAAACGCAACATTGTGGT+AGG | + | chr7.3:60699614-60699633 | None:intergenic | 35.0% | |
ATAATGTGATGAACCATGAG+AGG | + | chr7.3:60698532-60698551 | None:intergenic | 35.0% | |
ATATAGGTTTGCATTGTGCT+TGG | - | chr7.3:60700412-60700431 | MS.gene20093:intron | 35.0% | |
CAGTTACTCTACAATTGCTT+GGG | - | chr7.3:60699042-60699061 | MS.gene20093:intron | 35.0% | |
CCTAACTTGAACTCTATTTC+TGG | - | chr7.3:60698833-60698852 | MS.gene20093:CDS | 35.0% | |
GCACAAAGCTACAACTATAT+AGG | + | chr7.3:60699278-60699297 | None:intergenic | 35.0% | |
GCATTTCTTGACGAACTAAT+TGG | + | chr7.3:60697634-60697653 | None:intergenic | 35.0% | |
GTTCGTCAAGAAATGCAAAA+TGG | - | chr7.3:60697638-60697657 | MS.gene20093:intron | 35.0% | |
TAACAGTATTAGTCCTCTCA+TGG | - | chr7.3:60698516-60698535 | MS.gene20093:intron | 35.0% | |
TGACATGATTGAAACAGTGA+TGG | - | chr7.3:60699568-60699587 | MS.gene20093:intron | 35.0% | |
TGTATTGAAGTCACCTAATG+AGG | + | chr7.3:60697822-60697841 | None:intergenic | 35.0% | |
TTAGGGACCAAAAATGTTGA+TGG | + | chr7.3:60700218-60700237 | None:intergenic | 35.0% | |
! | AAATAGAGTTCAAGTTAGGG+AGG | + | chr7.3:60698832-60698851 | None:intergenic | 35.0% |
! | ATGCTTTTATCACCTATTGG+AGG | - | chr7.3:60700445-60700464 | MS.gene20093:intron | 35.0% |
! | CCAGAAATAGAGTTCAAGTT+AGG | + | chr7.3:60698836-60698855 | None:intergenic | 35.0% |
! | CTCATTGGTTATTGGATGTT+TGG | - | chr7.3:60699313-60699332 | MS.gene20093:intron | 35.0% |
! | TGACTTTAGAGAAACCAAAC+TGG | - | chr7.3:60699362-60699381 | MS.gene20093:intron | 35.0% |
! | TGGTGTTAACATTGTCTACA+TGG | - | chr7.3:60698691-60698710 | MS.gene20093:CDS | 35.0% |
!! | AGCATTGACTTGGTCAAAAT+TGG | - | chr7.3:60697379-60697398 | MS.gene20093:intron | 35.0% |
!! | ATTACTTTTCCGTTTTTCGG+TGG | - | chr7.3:60699781-60699800 | MS.gene20093:intron | 35.0% |
!! | CTTTGAAATTGAGTTTCACC+TGG | + | chr7.3:60699438-60699457 | None:intergenic | 35.0% |
AAAAGCGATACTTAGGAAGC+TGG | - | chr7.3:60697411-60697430 | MS.gene20093:intron | 40.0% | |
AAGAAACCAAAGACAGTTCC+TGG | + | chr7.3:60699130-60699149 | None:intergenic | 40.0% | |
ACACCGGAAAAACCATCTAA+GGG | - | chr7.3:60699226-60699245 | MS.gene20093:intron | 40.0% | |
AGAAACCAAAGACAGTTCCT+GGG | + | chr7.3:60699129-60699148 | None:intergenic | 40.0% | |
AGCAACAATTCCATCTACAC+CGG | - | chr7.3:60699210-60699229 | MS.gene20093:intron | 40.0% | |
AGGACTAATACTGTTACTCC+AGG | + | chr7.3:60698512-60698531 | None:intergenic | 40.0% | |
ATTCCACAATGTTACTGCCA+TGG | - | chr7.3:60697672-60697691 | MS.gene20093:intron | 40.0% | |
ATTGACCTCAATCCTCCAAT+AGG | + | chr7.3:60700460-60700479 | None:intergenic | 40.0% | |
ATTGCAAGCCACATTATGCA+TGG | + | chr7.3:60699945-60699964 | None:intergenic | 40.0% | |
ATTGTCTACATGGTAACTGG+AGG | - | chr7.3:60698701-60698720 | MS.gene20093:CDS | 40.0% | |
CAATAACCAATGAGAGCAAC+TGG | + | chr7.3:60699307-60699326 | None:intergenic | 40.0% | |
CGTCAAGAAATGCAAAATGG+TGG | - | chr7.3:60697641-60697660 | MS.gene20093:intron | 40.0% | |
CTAATAGCTCCCAAACTTCA+TGG | + | chr7.3:60697051-60697070 | None:intergenic | 40.0% | |
CTGAGACCAAAACTGCAAAA+GGG | + | chr7.3:60697245-60697264 | None:intergenic | 40.0% | |
GCAGTTACTCTACAATTGCT+TGG | - | chr7.3:60699041-60699060 | MS.gene20093:intron | 40.0% | |
GTACCTTAACGACATGATAG+CGG | + | chr7.3:60698873-60698892 | None:intergenic | 40.0% | |
GTGAGACAAGACAAAGTGAA+CGG | + | chr7.3:60698810-60698829 | None:intergenic | 40.0% | |
GTGTAGATGGAATTGTTGCT+TGG | + | chr7.3:60699210-60699229 | None:intergenic | 40.0% | |
TACACCGGAAAAACCATCTA+AGG | - | chr7.3:60699225-60699244 | MS.gene20093:intron | 40.0% | |
TACTTTCCAGTTGCTCTCAT+TGG | - | chr7.3:60699298-60699317 | MS.gene20093:intron | 40.0% | |
TATCACCTATTGGAGGATTG+AGG | - | chr7.3:60700452-60700471 | MS.gene20093:intron | 40.0% | |
TGACCAAGTCAATGTTAACG+TGG | - | chr7.3:60697273-60697292 | MS.gene20093:intron | 40.0% | |
TGAGACCAAAACTGCAAAAG+GGG | + | chr7.3:60697244-60697263 | None:intergenic | 40.0% | |
TTAACGCATGACTCCTCATT+AGG | - | chr7.3:60697806-60697825 | MS.gene20093:intron | 40.0% | |
TTCAGCTACCATGCATAATG+TGG | - | chr7.3:60699934-60699953 | MS.gene20093:intron | 40.0% | |
! | ACCAAACTGGCTTATTGCAA+TGG | - | chr7.3:60699375-60699394 | MS.gene20093:intron | 40.0% |
! | AGACCACGTTAACATTGACT+TGG | + | chr7.3:60697279-60697298 | None:intergenic | 40.0% |
! | CAGTTGCTCTCATTGGTTAT+TGG | - | chr7.3:60699305-60699324 | MS.gene20093:intron | 40.0% |
! | GAACTGGGTCAATATGCTTT+TGG | - | chr7.3:60698617-60698636 | MS.gene20093:intron | 40.0% |
! | GACTTGGTCAAAATTGGTCT+GGG | - | chr7.3:60697385-60697404 | MS.gene20093:intron | 40.0% |
! | GGCAAAAAGCAATTGATGAC+TGG | - | chr7.3:60697605-60697624 | MS.gene20093:intron | 40.0% |
! | TCTGAGACCAAAACTGCAAA+AGG | + | chr7.3:60697246-60697265 | None:intergenic | 40.0% |
! | TTTGGTTTCTTCAATGCCCT+TGG | - | chr7.3:60699139-60699158 | MS.gene20093:intron | 40.0% |
!! | AGCTTCCTAAGTATCGCTTT+TGG | + | chr7.3:60697412-60697431 | None:intergenic | 40.0% |
!! | TGACTTGGTCAAAATTGGTC+TGG | - | chr7.3:60697384-60697403 | MS.gene20093:intron | 40.0% |
!!! | GGTCTACTAGGATTTTTTGG+TGG | - | chr7.3:60699802-60699821 | MS.gene20093:CDS | 40.0% |
!!! | GGTGGTCTACTAGGATTTTT+TGG | - | chr7.3:60699799-60699818 | MS.gene20093:CDS | 40.0% |
AACCATCTAAGGGTCCTATG+TGG | - | chr7.3:60699236-60699255 | MS.gene20093:intron | 45.0% | |
AAGCAAAAGCCACATCTCCA+AGG | + | chr7.3:60699159-60699178 | None:intergenic | 45.0% | |
ACAATCACTCCTCTCCACAT+AGG | + | chr7.3:60699253-60699272 | None:intergenic | 45.0% | |
AGACAAGACAAAGTGAACGG+AGG | + | chr7.3:60698807-60698826 | None:intergenic | 45.0% | |
AGCAAAAGCCACATCTCCAA+GGG | + | chr7.3:60699158-60699177 | None:intergenic | 45.0% | |
CAAAAGGGGCAGTACTTAGA+GGG | + | chr7.3:60697230-60697249 | None:intergenic | 45.0% | |
CAACCATGGCAGTAACATTG+TGG | + | chr7.3:60697678-60697697 | None:intergenic | 45.0% | |
CAAGACAAGCTGAATCTCCT+TGG | + | chr7.3:60699975-60699994 | None:intergenic | 45.0% | |
CAAGGAGATTCAGCTTGTCT+TGG | - | chr7.3:60699973-60699992 | MS.gene20093:intron | 45.0% | |
CACAATGTTACTGCCATGGT+TGG | - | chr7.3:60697676-60697695 | MS.gene20093:CDS | 45.0% | |
CCATGTTATTGGAAGCTACC+AGG | - | chr7.3:60699417-60699436 | MS.gene20093:intron | 45.0% | |
CCTAGTAGACCACCGAAAAA+CGG | + | chr7.3:60699793-60699812 | None:intergenic | 45.0% | |
CCTGGTAGCTTCCAATAACA+TGG | + | chr7.3:60699420-60699439 | None:intergenic | 45.0% | |
GAAACCAAAGACAGTTCCTG+GGG | + | chr7.3:60699128-60699147 | None:intergenic | 45.0% | |
GAGATGCATGAAATGGTACC+CGG | - | chr7.3:60698572-60698591 | MS.gene20093:intron | 45.0% | |
GCAATGAACATTGTGAACGC+TGG | + | chr7.3:60699760-60699779 | None:intergenic | 45.0% | |
GCCATTGCAATAAGCCAGTT+TGG | + | chr7.3:60699379-60699398 | None:intergenic | 45.0% | |
GGCTTGCAATATACAAGCCA+AGG | - | chr7.3:60699955-60699974 | MS.gene20093:intron | 45.0% | |
TCTTAGTCTCCCTTATGCCA+TGG | - | chr7.3:60697708-60697727 | MS.gene20093:CDS | 45.0% | |
TGGGACCAAAAGCGATACTT+AGG | - | chr7.3:60697404-60697423 | MS.gene20093:intron | 45.0% | |
! | GATGGTTTTTCCGGTGTAGA+TGG | + | chr7.3:60699223-60699242 | None:intergenic | 45.0% |
! | GATGTGGCTTTTGCTTATGC+TGG | - | chr7.3:60699163-60699182 | MS.gene20093:intron | 45.0% |
! | GGACCCTTAGATGGTTTTTC+CGG | + | chr7.3:60699232-60699251 | None:intergenic | 45.0% |
! | TACTGCCCCTTTTGCAGTTT+TGG | - | chr7.3:60697236-60697255 | MS.gene20093:intron | 45.0% |
!!! | ATGAATTTTTATATTTTTTA+TGG | + | chr7.3:60698127-60698146 | None:intergenic | 5.0% |
!!! | TTAAAAAATTCTAATTTTTT+GGG | + | chr7.3:60698075-60698094 | None:intergenic | 5.0% |
AAGAACACCAGCTCCAACCA+TGG | + | chr7.3:60697692-60697711 | None:intergenic | 50.0% | |
ACTACCCCAGGAACTGTCTT+TGG | - | chr7.3:60699121-60699140 | MS.gene20093:intron | 50.0% | |
ATACCATCCAAGTTGCGCCA+TGG | + | chr7.3:60697728-60697747 | None:intergenic | 50.0% | |
CAAGTTGCGCCATGGCATAA+GGG | + | chr7.3:60697720-60697739 | None:intergenic | 50.0% | |
CTCCACATAGGACCCTTAGA+TGG | + | chr7.3:60699241-60699260 | None:intergenic | 50.0% | |
CTTCAATGCCCTTGGAGATG+TGG | - | chr7.3:60699147-60699166 | MS.gene20093:intron | 50.0% | |
GCAAAAGGGGCAGTACTTAG+AGG | + | chr7.3:60697231-60697250 | None:intergenic | 50.0% | |
GGAGATTCAGCTTGTCTTGG+TGG | - | chr7.3:60699976-60699995 | MS.gene20093:intron | 50.0% | |
GGGTGAAAATCGCAACTTCG+CGG | - | chr7.3:60697454-60697473 | MS.gene20093:intron | 50.0% | |
GGTGAAAATCGCAACTTCGC+GGG | - | chr7.3:60697455-60697474 | MS.gene20093:intron | 50.0% | |
TACAAAGCTACGACTACCCC+AGG | - | chr7.3:60699109-60699128 | MS.gene20093:intron | 50.0% | |
TCTAAGGGTCCTATGTGGAG+AGG | - | chr7.3:60699241-60699260 | MS.gene20093:intron | 50.0% | |
TGACCAAGTCAATGCTGACG+TGG | + | chr7.3:60697375-60697394 | None:intergenic | 50.0% | |
TGCTTATGCTGGACACAACG+TGG | - | chr7.3:60699174-60699193 | MS.gene20093:intron | 50.0% | |
TGGGCAGCTTCTGCTCATAA+AGG | - | chr7.3:60699061-60699080 | MS.gene20093:intron | 50.0% | |
!! | CAATGTGTTTTCAGGGGTCC+TGG | - | chr7.3:60698491-60698510 | MS.gene20093:intron | 50.0% |
!! | CCGTTTTTCGGTGGTCTACT+AGG | - | chr7.3:60699790-60699809 | MS.gene20093:CDS | 50.0% |
!! | CCTTAACGACATGATAGCGG+CGG | + | chr7.3:60698870-60698889 | None:intergenic | 50.0% |
ATGCCATGGCGCAACTTGGA+TGG | - | chr7.3:60697722-60697741 | MS.gene20093:CDS | 55.0% | |
CCAAGTTGCGCCATGGCATA+AGG | + | chr7.3:60697721-60697740 | None:intergenic | 55.0% | |
CCGCCGCTATCATGTCGTTA+AGG | - | chr7.3:60698867-60698886 | MS.gene20093:CDS | 55.0% | |
CCTTATGCCATGGCGCAACT+TGG | - | chr7.3:60697718-60697737 | MS.gene20093:CDS | 55.0% | |
GTTACTGCCATGGTTGGAGC+TGG | - | chr7.3:60697682-60697701 | MS.gene20093:CDS | 55.0% | |
!! | CGTCCACGTCAGCATTGACT+TGG | - | chr7.3:60697369-60697388 | MS.gene20093:intron | 55.0% |
AGGGGCAGTACTTAGAGGGC+CGG | + | chr7.3:60697226-60697245 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 60697009 | 60700516 | 60697009 | ID=MS.gene20093 |
chr7.3 | mRNA | 60697009 | 60700516 | 60697009 | ID=MS.gene20093.t1;Parent=MS.gene20093 |
chr7.3 | exon | 60700508 | 60700516 | 60700508 | ID=MS.gene20093.t1.exon1;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60700508 | 60700516 | 60700508 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60699782 | 60699939 | 60699782 | ID=MS.gene20093.t1.exon2;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60699782 | 60699939 | 60699782 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60698637 | 60699020 | 60698637 | ID=MS.gene20093.t1.exon3;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60698637 | 60699020 | 60698637 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60698087 | 60698480 | 60698087 | ID=MS.gene20093.t1.exon4;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60698087 | 60698480 | 60698087 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60697872 | 60697977 | 60697872 | ID=MS.gene20093.t1.exon5;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60697872 | 60697977 | 60697872 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60697673 | 60697764 | 60697673 | ID=MS.gene20093.t1.exon6;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60697673 | 60697764 | 60697673 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60697518 | 60697586 | 60697518 | ID=MS.gene20093.t1.exon7;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60697518 | 60697586 | 60697518 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
chr7.3 | exon | 60697009 | 60697107 | 60697009 | ID=MS.gene20093.t1.exon8;Parent=MS.gene20093.t1 |
chr7.3 | CDS | 60697009 | 60697107 | 60697009 | ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1 |
Gene Sequence |
Protein sequence |