AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20093


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20093.t1 MTR_7g038910 99.307 433 3 0 4 436 11 443 0.0 886
MS.gene20093.t1 MTR_7g038910 99.208 379 3 0 4 382 11 389 0.0 773
MS.gene20093.t1 MTR_6g022790 84.296 433 68 0 4 436 23 455 0.0 771
MS.gene20093.t1 MTR_2g101920 83.641 434 70 1 4 436 28 461 0.0 735
MS.gene20093.t1 MTR_7g038910 99.425 348 2 0 4 351 11 358 0.0 711
MS.gene20093.t1 MTR_6g023065 80.841 428 82 0 9 436 36 463 0.0 693
MS.gene20093.t1 MTR_6g022780 79.767 430 84 2 8 436 1 428 0.0 673
MS.gene20093.t1 MTR_6g023075 77.674 430 93 2 8 436 1 428 0.0 659
MS.gene20093.t1 MTR_8g080120 67.593 432 140 0 5 436 5 436 0.0 639
MS.gene20093.t1 MTR_2g096830 76.815 427 98 1 11 436 2 428 0.0 628
MS.gene20093.t1 MTR_4g103890 68.765 413 129 0 22 434 9 421 0.0 618
MS.gene20093.t1 MTR_3g085820 74.859 354 89 0 5 358 15 368 0.0 560
MS.gene20093.t1 MTR_5g054730 62.963 432 156 1 5 436 12 439 0.0 555
MS.gene20093.t1 MTR_1g093020 61.574 432 162 1 5 436 10 437 0.0 544
MS.gene20093.t1 MTR_1g093030 61.737 426 159 1 11 436 16 437 0.0 539
MS.gene20093.t1 MTR_0531s0020 80.312 320 63 0 7 326 33 352 0.0 528
MS.gene20093.t1 MTR_2g096830 75.731 342 82 1 11 351 2 343 0.0 524
MS.gene20093.t1 MTR_1g093020 62.843 401 145 1 5 405 10 406 0.0 514
MS.gene20093.t1 MTR_3g005740 54.060 431 194 2 10 436 39 469 9.06e-167 477
MS.gene20093.t1 MTR_3g115090 37.471 435 258 5 15 436 76 509 1.05e-94 294
MS.gene20093.t1 MTR_2g012470 37.358 439 263 5 8 435 80 517 1.36e-93 291
MS.gene20093.t1 MTR_5g023240 36.758 438 255 6 7 432 70 497 1.58e-92 289
MS.gene20093.t1 MTR_4g075750 34.459 444 274 4 9 435 56 499 1.53e-88 278
MS.gene20093.t1 MTR_5g023260 35.666 443 271 6 7 436 91 532 3.94e-88 278
MS.gene20093.t1 MTR_3g110660 31.209 455 260 11 22 433 32 476 1.85e-59 202
MS.gene20093.t1 MTR_1g105980 31.579 456 253 12 24 433 23 465 1.72e-58 199
MS.gene20093.t1 MTR_4g055610 30.735 449 283 11 4 436 24 460 2.46e-58 198
MS.gene20093.t1 MTR_8g099320 29.138 429 282 9 23 436 27 448 2.95e-58 197
MS.gene20093.t1 MTR_1g007380 31.317 463 271 13 10 433 12 466 2.31e-55 191
MS.gene20093.t1 MTR_1g105995 30.000 470 271 13 7 432 8 463 1.11e-54 189
MS.gene20093.t1 MTR_1g492640 30.516 426 275 9 25 436 61 479 6.72e-54 187
MS.gene20093.t1 MTR_1g105990 31.729 457 250 14 24 431 22 465 8.20e-54 186
MS.gene20093.t1 MTR_3g088475 28.913 460 288 10 4 430 18 471 2.90e-52 182
MS.gene20093.t1 MTR_3g088455 28.696 460 288 11 4 430 18 470 8.27e-51 179
MS.gene20093.t1 MTR_1g106000 28.850 461 268 11 24 433 16 467 1.22e-50 178
MS.gene20093.t1 MTR_3g096800 29.792 480 275 13 2 436 12 474 9.24e-50 176
MS.gene20093.t1 MTR_3g461480 28.929 439 270 9 24 426 28 460 5.98e-48 171
MS.gene20093.t1 MTR_1g070470 29.680 438 261 13 23 435 22 437 6.63e-48 170
MS.gene20093.t1 MTR_4g073520 28.850 461 263 13 24 433 60 506 8.59e-48 171
MS.gene20093.t1 MTR_4g073520 28.788 462 264 13 23 433 59 506 1.22e-47 171
MS.gene20093.t1 MTR_3g096830 29.742 427 250 10 5 400 22 429 7.70e-47 167
MS.gene20093.t1 MTR_5g096840 29.638 442 263 13 24 426 30 462 3.01e-45 163
MS.gene20093.t1 MTR_1g007270 28.675 415 259 12 15 400 28 434 2.06e-44 161
MS.gene20093.t1 MTR_1g029750 28.947 418 251 10 24 402 36 446 2.45e-43 159
MS.gene20093.t1 MTR_3g461440 28.706 425 264 11 9 400 11 429 2.67e-43 158
MS.gene20093.t1 MTR_8g094290 26.652 469 282 12 2 432 24 468 5.77e-43 157
MS.gene20093.t1 MTR_3g096840 28.884 457 265 13 24 436 40 480 1.41e-42 156
MS.gene20093.t1 MTR_3g110660 33.333 330 186 9 11 316 23 342 1.60e-42 154
MS.gene20093.t1 MTR_3g461470 28.774 424 265 11 9 400 11 429 3.36e-42 155
MS.gene20093.t1 MTR_1g007240 27.273 462 282 14 15 436 7 454 6.50e-42 154
MS.gene20093.t1 MTR_3g061390 28.678 401 247 9 34 400 34 429 1.74e-40 150
MS.gene20093.t1 MTR_5g096850 28.442 443 267 14 24 426 26 458 2.17e-40 150
MS.gene20093.t1 MTR_1g492640 30.172 348 224 8 101 436 7 347 1.54e-39 145
MS.gene20093.t1 MTR_3g088465 30.890 382 232 14 4 365 18 387 3.64e-39 145
MS.gene20093.t1 MTR_3g110430 25.541 462 301 12 2 425 36 492 7.54e-39 147
MS.gene20093.t1 MTR_2g031750 25.968 439 268 12 24 417 13 439 4.03e-37 141
MS.gene20093.t1 MTR_3g461430 26.065 399 260 9 34 400 41 436 2.33e-36 140
MS.gene20093.t1 MTR_1g007180 26.039 457 285 13 21 436 10 454 6.11e-36 138
MS.gene20093.t1 MTR_4g104510 27.735 393 265 13 51 436 68 448 9.37e-36 137
MS.gene20093.t1 MTR_4g104510 27.296 392 266 12 51 436 68 446 1.49e-35 137
MS.gene20093.t1 MTR_1g492640 31.773 299 186 7 25 312 43 334 2.28e-34 132
MS.gene20093.t1 MTR_3g110420 24.894 470 306 13 5 435 6 467 4.06e-34 133
MS.gene20093.t1 MTR_1g492640 31.773 299 186 7 25 312 61 352 4.07e-34 131
MS.gene20093.t1 MTR_3g085800 62.963 81 30 0 356 436 4 84 2.30e-31 115
MS.gene20093.t1 MTR_3g461440 28.819 288 176 6 136 400 11 292 7.77e-31 121
MS.gene20093.t1 MTR_5g081630 26.531 392 271 12 51 436 1 381 9.22e-28 114
MS.gene20093.t1 MTR_2g031750 25.000 376 228 11 84 417 9 372 1.70e-25 107
MS.gene20093.t1 MTR_4g055637 31.481 216 131 5 231 436 168 376 2.83e-22 98.2
MS.gene20093.t1 MTR_3g110420 25.449 334 220 11 5 316 6 332 4.31e-21 94.4
MS.gene20093.t1 MTR_3g069960 26.615 387 241 14 69 436 19 381 8.92e-21 94.0
MS.gene20093.t1 MTR_1g007180 24.415 299 199 6 162 436 75 370 1.26e-20 93.2
MS.gene20093.t1 MTR_3g069960 26.615 387 241 14 69 436 72 434 1.45e-20 94.0
MS.gene20093.t1 MTR_3g465510 24.601 439 293 15 3 428 17 430 1.68e-20 93.6
MS.gene20093.t1 MTR_8g467180 23.214 392 263 15 21 399 11 377 1.64e-19 90.5
MS.gene20093.t1 MTR_3g465440 23.261 417 284 13 25 431 47 437 3.50e-19 90.9
MS.gene20093.t1 MTR_7g010790 25.515 388 239 12 22 391 37 392 2.22e-18 87.4
MS.gene20093.t1 MTR_1g094620 25.182 413 272 15 8 411 137 521 4.56e-18 87.0
MS.gene20093.t1 MTR_7g010750 25.806 403 246 12 9 390 20 390 5.97e-18 85.9
MS.gene20093.t1 MTR_1g094620 25.238 420 270 16 8 411 137 528 8.80e-18 85.9
MS.gene20093.t1 MTR_8g467190 22.335 394 276 10 15 399 4 376 2.11e-17 84.0
MS.gene20093.t1 MTR_1g492640 28.500 200 140 2 25 222 43 241 1.08e-16 80.1
MS.gene20093.t1 MTR_8g465310 21.914 397 259 12 15 392 4 368 1.92e-16 81.3
MS.gene20093.t1 MTR_3g033730 25.132 378 242 12 31 395 47 396 2.09e-16 81.3
MS.gene20093.t1 MTR_1g492640 28.500 200 140 2 25 222 61 259 2.54e-16 79.3
MS.gene20093.t1 MTR_5g017200 31.858 226 139 6 34 248 39 260 3.23e-16 79.0
MS.gene20093.t1 MTR_7g062410 22.481 387 261 14 21 394 31 391 8.25e-16 79.3
MS.gene20093.t1 MTR_4g033275 33.333 96 61 2 313 405 4 99 6.53e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20093.t1 AT5G40780 83.753 437 69 1 2 436 10 446 0.0 766
MS.gene20093.t1 AT1G48640 78.621 435 92 1 2 436 20 453 0.0 709
MS.gene20093.t1 AT5G40780 84.171 398 63 0 39 436 1 398 0.0 701
MS.gene20093.t1 AT5G40780 84.171 398 63 0 39 436 1 398 0.0 701
MS.gene20093.t1 AT1G24400 78.689 427 91 0 10 436 15 441 0.0 674
MS.gene20093.t1 AT1G67640 77.986 427 94 0 10 436 15 441 0.0 654
MS.gene20093.t1 AT1G61270 64.679 436 150 2 2 433 10 445 0.0 593
MS.gene20093.t1 AT3G01760 64.302 437 148 4 2 431 7 442 0.0 583
MS.gene20093.t1 AT1G25530 62.326 430 162 0 7 436 11 440 0.0 539
MS.gene20093.t1 AT1G71680 58.199 433 180 1 5 436 16 448 9.70e-172 489
MS.gene20093.t1 AT1G71680 58.908 348 142 1 5 351 16 363 1.76e-142 411
MS.gene20093.t1 AT1G47670 37.358 439 263 5 8 435 78 515 1.74e-93 291
MS.gene20093.t1 AT4G35180 33.813 417 255 8 14 416 48 457 3.17e-68 224
MS.gene20093.t1 AT1G10010 32.688 465 257 13 12 433 18 469 3.54e-60 203
MS.gene20093.t1 AT1G10010 32.688 465 257 13 12 433 19 470 5.29e-60 203
MS.gene20093.t1 AT1G08230 30.649 447 289 8 5 436 9 449 1.60e-59 201
MS.gene20093.t1 AT5G41800 29.508 427 279 9 25 436 28 447 4.14e-58 197
MS.gene20093.t1 AT1G58360 31.126 453 260 14 22 432 35 477 1.12e-53 186
MS.gene20093.t1 AT4G35180 36.594 276 165 4 14 284 48 318 2.11e-53 182
MS.gene20093.t1 AT5G49630 30.989 455 260 13 22 432 31 475 2.87e-48 172
MS.gene20093.t1 AT5G09220 28.731 449 272 11 24 432 46 486 4.88e-48 171
MS.gene20093.t1 AT5G63850 29.111 450 269 12 24 432 19 459 2.06e-46 167
MS.gene20093.t1 AT1G44100 28.478 460 279 12 15 432 22 473 1.40e-45 164
MS.gene20093.t1 AT1G77380 29.194 459 280 11 11 432 19 469 2.32e-45 164
MS.gene20093.t1 AT1G08230 30.704 355 227 7 95 436 1 349 6.68e-41 149
MS.gene20093.t1 AT5G23810 28.538 424 247 12 22 400 24 436 1.76e-38 145
MS.gene20093.t1 AT1G08230 30.816 331 210 7 119 436 6 330 4.25e-38 141
MS.gene20093.t1 AT1G08230 30.816 331 210 7 119 436 6 330 4.25e-38 141
MS.gene20093.t1 AT1G08230 30.816 331 210 7 119 436 6 330 4.25e-38 141
MS.gene20093.t1 AT3G55740 27.009 448 293 21 5 436 8 437 4.94e-27 112
MS.gene20093.t1 AT3G55740 27.820 399 257 19 51 436 1 381 1.31e-26 110
MS.gene20093.t1 AT3G55740 27.820 399 257 19 51 436 1 381 1.31e-26 110
MS.gene20093.t1 AT5G23810 28.834 326 195 10 22 321 24 338 1.57e-26 110
MS.gene20093.t1 AT2G36590 25.926 405 282 13 12 408 12 406 3.62e-26 110
MS.gene20093.t1 AT2G39890 25.566 442 295 17 11 436 17 440 1.49e-25 108
MS.gene20093.t1 AT2G39890 25.566 442 295 17 11 436 17 440 1.49e-25 108
MS.gene20093.t1 AT2G39890 26.065 399 264 15 51 436 1 381 1.68e-25 107
MS.gene20093.t1 AT5G15240 24.318 403 253 12 4 390 17 383 9.87e-21 94.4
MS.gene20093.t1 AT2G36590 27.010 311 211 12 12 316 12 312 1.14e-16 81.3
MS.gene20093.t1 AT5G23810 28.099 242 141 8 22 239 24 256 2.63e-15 76.3
MS.gene20093.t1 AT5G02170 23.274 391 263 12 16 394 125 490 3.74e-14 74.7
MS.gene20093.t1 AT5G02170 23.822 382 243 11 16 394 125 461 4.26e-14 74.3
MS.gene20093.t1 AT3G28960 21.447 387 249 12 25 391 15 366 5.50e-14 73.9
MS.gene20093.t1 AT3G28960 21.447 387 249 12 25 391 15 366 5.50e-14 73.9
MS.gene20093.t1 AT3G28960 21.447 387 249 12 25 391 15 366 5.50e-14 73.9
MS.gene20093.t1 AT3G28960 21.447 387 249 12 25 391 15 366 5.50e-14 73.9
MS.gene20093.t1 AT3G09340 23.387 372 255 12 31 394 139 488 7.73e-14 73.9
MS.gene20093.t1 AT3G09330 23.387 372 255 12 31 394 139 488 1.47e-13 72.8
MS.gene20093.t1 AT2G39130 22.807 399 271 15 6 394 142 513 1.13e-12 70.1
MS.gene20093.t1 AT2G39130 22.807 399 271 15 6 394 142 513 1.13e-12 70.1
MS.gene20093.t1 AT2G41190 22.500 400 287 9 33 428 154 534 1.68e-12 69.7
MS.gene20093.t1 AT2G41190 24.405 336 231 9 33 364 154 470 1.81e-11 66.2
MS.gene20093.t1 AT3G11900 20.244 410 288 11 36 426 41 430 3.50e-11 65.1
MS.gene20093.t1 AT3G11900 20.244 410 288 11 36 426 41 430 3.50e-11 65.1
MS.gene20093.t1 AT2G39130 23.118 372 249 15 6 367 142 486 9.65e-11 63.9

Find 86 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAACTTGAACTCTATTTC+TGG 0.163457 7.3:-60698670 MS.gene20093:CDS
CAGTTGCTCTCATTGGTTAT+TGG 0.237858 7.3:-60698198 MS.gene20093:CDS
AATCATAATTCTTCGCATTA+AGG 0.237872 7.3:+60697020 None:intergenic
GTTATAGAAAATGTTGATTA+TGG 0.261549 7.3:-60698418 MS.gene20093:CDS
GCATTTCTTGACGAACTAAT+TGG 0.266230 7.3:+60699872 None:intergenic
CTCATTGGTTATTGGATGTT+TGG 0.296914 7.3:-60698190 MS.gene20093:CDS
TTTGTTGTTATCCATGTTAT+TGG 0.301091 7.3:-60698097 MS.gene20093:CDS
CCAGAAATAGAGTTCAAGTT+AGG 0.313363 7.3:+60698670 None:intergenic
TACTTTCCAGTTGCTCTCAT+TGG 0.318123 7.3:-60698205 MS.gene20093:CDS
ACTACCCCAGGAACTGTCTT+TGG 0.323215 7.3:-60698382 MS.gene20093:CDS
GCCATTGCAATAAGCCAGTT+TGG 0.358796 7.3:+60698127 None:intergenic
TTTGGTTTCTTCAATGCCCT+TGG 0.367776 7.3:-60698364 MS.gene20093:CDS
GGAGATTCAGCTTGTCTTGG+TGG 0.374415 7.3:-60697527 MS.gene20093:CDS
AAGAAACCAAAGACAGTTCC+TGG 0.375264 7.3:+60698376 None:intergenic
TAGCTTACAAAGTATGTTGT+TGG 0.377102 7.3:+60697665 None:intergenic
TCATCACATTATACACGTTA+TGG 0.383988 7.3:-60698963 MS.gene20093:CDS
CCAAGTTGCGCCATGGCATA+AGG 0.384842 7.3:+60699785 None:intergenic
AACATTGTCTACATGGTAAC+TGG 0.392632 7.3:-60698805 MS.gene20093:CDS
GAACTGGGTCAATATGCTTT+TGG 0.394335 7.3:-60698886 MS.gene20093:CDS
CAATAACCAATGAGAGCAAC+TGG 0.394586 7.3:+60698199 None:intergenic
GTTCGTCAAGAAATGCAAAA+TGG 0.402237 7.3:-60699865 MS.gene20093:CDS
GTTTCAATCATGTCAAATAC+TGG 0.407218 7.3:+60697943 None:intergenic
GCACAAAGCTACAACTATAT+AGG 0.415908 7.3:+60698228 None:intergenic
CTCCACATAGGACCCTTAGA+TGG 0.416492 7.3:+60698265 None:intergenic
ATTATACACGTTATGGCAAA+TGG 0.419864 7.3:-60698956 MS.gene20093:CDS
CTTCAATGCCCTTGGAGATG+TGG 0.427219 7.3:-60698356 MS.gene20093:CDS
ATTGACCTCAATCCTCCAAT+AGG 0.449419 7.3:+60697046 None:intergenic
CAACAACTTATTGTTGAAGT+TGG 0.451243 7.3:-60698832 MS.gene20093:CDS
CAGTTACTCTACAATTGCTT+GGG 0.463934 7.3:-60698461 MS.gene20093:CDS
TATCACCTATTGGAGGATTG+AGG 0.465217 7.3:-60697051 MS.gene20093:CDS
GCAGTTACTCTACAATTGCT+TGG 0.470215 7.3:-60698462 MS.gene20093:intron
ATATAGGTTTGCATTGTGCT+TGG 0.474894 7.3:-60697091 MS.gene20093:intron
CCGCCGCTATCATGTCGTTA+AGG 0.476124 7.3:-60698636 MS.gene20093:intron
CCTTATGCCATGGCGCAACT+TGG 0.477863 7.3:-60699785 MS.gene20093:CDS
TGGGCAGCTTCTGCTCATAA+AGG 0.483954 7.3:-60698442 MS.gene20093:CDS
CACAATGTTACTGCCATGGT+TGG 0.488589 7.3:-60699827 MS.gene20093:CDS
CAGAAATAGAGTTCAAGTTA+GGG 0.490914 7.3:+60698671 None:intergenic
CCATGTTATTGGAAGCTACC+AGG 0.495046 7.3:-60698086 MS.gene20093:intron
TATTGTACGAAATGTGTATG+TGG 0.498916 7.3:-60697872 MS.gene20093:CDS
CAAGACAAGCTGAATCTCCT+TGG 0.500865 7.3:+60697531 None:intergenic
CAAGGAGATTCAGCTTGTCT+TGG 0.504542 7.3:-60697530 MS.gene20093:CDS
CAAGTTGCGCCATGGCATAA+GGG 0.504930 7.3:+60699786 None:intergenic
TGACTTTAGAGAAACCAAAC+TGG 0.513027 7.3:-60698141 MS.gene20093:CDS
TGGTGTTAACATTGTCTACA+TGG 0.520753 7.3:-60698812 MS.gene20093:CDS
ATGCCATGGCGCAACTTGGA+TGG 0.528431 7.3:-60699781 MS.gene20093:intron
CCTGGTAGCTTCCAATAACA+TGG 0.529595 7.3:+60698086 None:intergenic
GTTACTGCCATGGTTGGAGC+TGG 0.535918 7.3:-60699821 MS.gene20093:CDS
ATTGTACGAAATGTGTATGT+GGG 0.542188 7.3:-60697871 MS.gene20093:intron
TCTTAGTCTCCCTTATGCCA+TGG 0.544235 7.3:-60699795 MS.gene20093:CDS
GTGTAGATGGAATTGTTGCT+TGG 0.553420 7.3:+60698296 None:intergenic
TTCAGCTACCATGCATAATG+TGG 0.558234 7.3:-60697569 MS.gene20093:intron
AATGGTTGAGATGCATGAAA+TGG 0.559811 7.3:-60698938 MS.gene20093:CDS
ACCAAACTGGCTTATTGCAA+TGG 0.571650 7.3:-60698128 MS.gene20093:CDS
TACAAAGCTACGACTACCCC+AGG 0.575799 7.3:-60698394 MS.gene20093:CDS
TAACAGTATTAGTCCTCTCA+TGG 0.577651 7.3:-60698987 MS.gene20093:CDS
AAGCAAAAGCCACATCTCCA+AGG 0.583498 7.3:+60698347 None:intergenic
GAGATGCATGAAATGGTACC+CGG 0.589392 7.3:-60698931 MS.gene20093:CDS
CAACCATGGCAGTAACATTG+TGG 0.590369 7.3:+60699828 None:intergenic
GGCTTGCAATATACAAGCCA+AGG 0.591776 7.3:-60697548 MS.gene20093:CDS
ATAAAACGCAACATTGTGGT+AGG 0.595326 7.3:+60697892 None:intergenic
AGAAACCAAAGACAGTTCCT+GGG 0.601129 7.3:+60698377 None:intergenic
TACAATAAAACGCAACATTG+TGG 0.602420 7.3:+60697888 None:intergenic
ACAATCACTCCTCTCCACAT+AGG 0.605359 7.3:+60698253 None:intergenic
AAGAACACCAGCTCCAACCA+TGG 0.608052 7.3:+60699814 None:intergenic
CTAAGATAAAGACATGCACT+TGG 0.610150 7.3:-60700507 None:intergenic
AACCATCTAAGGGTCCTATG+TGG 0.613202 7.3:-60698267 MS.gene20093:CDS
AGGACTAATACTGTTACTCC+AGG 0.615520 7.3:+60698994 None:intergenic
AGCAAAAGCCACATCTCCAA+GGG 0.623365 7.3:+60698348 None:intergenic
AAATAGAGTTCAAGTTAGGG+AGG 0.624445 7.3:+60698674 None:intergenic
ATTGCAAGCCACATTATGCA+TGG 0.627374 7.3:+60697561 None:intergenic
ATACCATCCAAGTTGCGCCA+TGG 0.632975 7.3:+60699778 None:intergenic
ATTCCACAATGTTACTGCCA+TGG 0.635834 7.3:-60699831 MS.gene20093:CDS
ACTTCAACAATAAGTTGTTG+TGG 0.635960 7.3:+60698835 None:intergenic
AGCAACAATTCCATCTACAC+CGG 0.636630 7.3:-60698293 MS.gene20093:CDS
TTTGATAGATATCATGAACT+GGG 0.640129 7.3:-60698901 MS.gene20093:CDS
CGTCAAGAAATGCAAAATGG+TGG 0.644321 7.3:-60699862 MS.gene20093:CDS
TGACATGATTGAAACAGTGA+TGG 0.651752 7.3:-60697935 MS.gene20093:CDS
TGCTTATGCTGGACACAACG+TGG 0.655602 7.3:-60698329 MS.gene20093:CDS
GTGAGACAAGACAAAGTGAA+CGG 0.655631 7.3:+60698696 None:intergenic
GTACCTTAACGACATGATAG+CGG 0.661138 7.3:+60698633 None:intergenic
ATTGTCTACATGGTAACTGG+AGG 0.663381 7.3:-60698802 MS.gene20093:CDS
TCTAAGGGTCCTATGTGGAG+AGG 0.663638 7.3:-60698262 MS.gene20093:CDS
GAAACCAAAGACAGTTCCTG+GGG 0.694600 7.3:+60698378 None:intergenic
ATAATGTGATGAACCATGAG+AGG 0.706479 7.3:+60698974 None:intergenic
AGACAAGACAAAGTGAACGG+AGG 0.734305 7.3:+60698699 None:intergenic
CCTTAACGACATGATAGCGG+CGG 0.739980 7.3:+60698636 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATATGTCAATTTATAT+TGG + chr7.3:60699727-60699746 None:intergenic 10.0%
!! CAAAAATTAACTTAAAAATA+AGG + chr7.3:60697999-60698018 None:intergenic 10.0%
!!! AAAAAATTCTAATTTTGTTT+AGG - chr7.3:60698166-60698185 MS.gene20093:CDS 10.0%
!!! AAAAGTTGATATATTTTATA+GGG - chr7.3:60698342-60698361 MS.gene20093:CDS 10.0%
!!! AAGTTTTTATAAAAAAAGAA+GGG + chr7.3:60699487-60699506 None:intergenic 10.0%
!!! AATACATTTTCATATATTTT+AGG - chr7.3:60697836-60697855 MS.gene20093:intron 10.0%
!!! ATACATTTTCATATATTTTA+GGG - chr7.3:60697837-60697856 MS.gene20093:intron 10.0%
!!! ATTAAATCGTATTTTTTTAA+GGG - chr7.3:60700039-60700058 MS.gene20093:intron 10.0%
!!! GTTAAAAAATTCTAATTTTT+TGG + chr7.3:60698076-60698095 None:intergenic 10.0%
!!! TAAAAAATTCTAATTTTTTG+GGG + chr7.3:60698074-60698093 None:intergenic 10.0%
!!! TAAGTTTTTATAAAAAAAGA+AGG + chr7.3:60699488-60699507 None:intergenic 10.0%
!! AAATAAAAAAATTACACACA+TGG - chr7.3:60697346-60697365 MS.gene20093:intron 15.0%
!! ACAAAATTCTGAATATTTAT+AGG + chr7.3:60700083-60700102 None:intergenic 15.0%
!! CAAAATTCTGAATATTTATA+GGG + chr7.3:60700082-60700101 None:intergenic 15.0%
!! GAAAAATTGGTATATTTATA+GGG + chr7.3:60697908-60697927 None:intergenic 15.0%
!!! AAAACATTTTTTTTTAGAGA+TGG + chr7.3:60697881-60697900 None:intergenic 15.0%
!!! AAAAGTGATTTTATTTTGTA+AGG + chr7.3:60700113-60700132 None:intergenic 15.0%
!!! AAACATTTTTTTTTAGAGAT+GGG + chr7.3:60697880-60697899 None:intergenic 15.0%
!!! AAAGTGTTATTTTATTTTGT+AGG - chr7.3:60700268-60700287 MS.gene20093:intron 15.0%
!!! AAGTGTTATTTTATTTTGTA+GGG - chr7.3:60700269-60700288 MS.gene20093:intron 15.0%
!!! ATTAAGTTTTTTCATTTGAT+AGG + chr7.3:60697137-60697156 None:intergenic 15.0%
!!! ATTGTATTTTATTTTGTAAG+GGG - chr7.3:60697434-60697453 MS.gene20093:intron 15.0%
!!! CATTAAATCGTATTTTTTTA+AGG - chr7.3:60700038-60700057 MS.gene20093:intron 15.0%
!!! CGTTTTGATTTTTTATTTTT+CGG - chr7.3:60697537-60697556 MS.gene20093:CDS 15.0%
!!! CTTTTTTTCATTGATAATAT+AGG - chr7.3:60700396-60700415 MS.gene20093:intron 15.0%
!!! GAAAAGTTGATATATTTTAT+AGG - chr7.3:60698341-60698360 MS.gene20093:CDS 15.0%
!!! GATTGTATTTTATTTTGTAA+GGG - chr7.3:60697433-60697452 MS.gene20093:intron 15.0%
!!! GTTTTGATTTTTTATTTTTC+GGG - chr7.3:60697538-60697557 MS.gene20093:CDS 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr7.3:60697968-60697987 None:intergenic 15.0%
!!! TTTATTTTTTAATAAGAACC+TGG - chr7.3:60700367-60700386 MS.gene20093:intron 15.0%
!! AATGAAAAAAAGATTAAACC+AGG + chr7.3:60700388-60700407 None:intergenic 20.0%
!! AGATTGATGAAAAATTAAAG+AGG - chr7.3:60697584-60697603 MS.gene20093:intron 20.0%
!! ATTCATTGGACATAAAATAT+AGG + chr7.3:60698386-60698405 None:intergenic 20.0%
!! CGAAAAATTGGTATATTTAT+AGG + chr7.3:60697909-60697928 None:intergenic 20.0%
!! GATAAAACAACTTCAATTAA+TGG - chr7.3:60699899-60699918 MS.gene20093:CDS 20.0%
!! TAACAAAGTAAAATACAATC+CGG - chr7.3:60697204-60697223 MS.gene20093:intron 20.0%
!! TGCTGATGAAAAAATTTATA+AGG + chr7.3:60700140-60700159 None:intergenic 20.0%
!! TGTTATCAAACCAATAAAAA+AGG - chr7.3:60697485-60697504 MS.gene20093:intron 20.0%
!! TTCATTGGACATAAAATATA+GGG + chr7.3:60698385-60698404 None:intergenic 20.0%
!!! AAAAAACTTAATAGCTGTTT+TGG - chr7.3:60697145-60697164 MS.gene20093:intron 20.0%
!!! AAAATTTCCATCAACATTTT+TGG - chr7.3:60700208-60700227 MS.gene20093:intron 20.0%
!!! AAGTTAAAGGAAAATTTTAG+AGG + chr7.3:60697940-60697959 None:intergenic 20.0%
!!! ACATTTTCCTTAAACATTTT+AGG + chr7.3:60700236-60700255 None:intergenic 20.0%
!!! AGTTAAAGGAAAATTTTAGA+GGG + chr7.3:60697939-60697958 None:intergenic 20.0%
!!! ATGAAGATGGAAAATTTTAT+AGG - chr7.3:60698280-60698299 MS.gene20093:CDS 20.0%
!!! ATTGTATTTTACTTTGTTAG+AGG + chr7.3:60697203-60697222 None:intergenic 20.0%
!!! CATTTTCCTTAAACATTTTA+GGG + chr7.3:60700235-60700254 None:intergenic 20.0%
!!! GCTGATAGAAAATTTTTATA+GGG + chr7.3:60700171-60700190 None:intergenic 20.0%
!!! GGATTGTATTTTATTTTGTA+AGG - chr7.3:60697432-60697451 MS.gene20093:intron 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr7.3:60697969-60697988 None:intergenic 20.0%
!!! GTTATAGAAAATGTTGATTA+TGG - chr7.3:60699085-60699104 MS.gene20093:intron 20.0%
!!! TAACAATTTTTGAGATTCAT+TGG + chr7.3:60698400-60698419 None:intergenic 20.0%
!!! TATAGGGTTAAATATGTTTT+TGG + chr7.3:60698369-60698388 None:intergenic 20.0%
!!! TCATATTGATTGATTAAAGA+CGG + chr7.3:60698923-60698942 None:intergenic 20.0%
!!! TGCTGATAGAAAATTTTTAT+AGG + chr7.3:60700172-60700191 None:intergenic 20.0%
!!! TTGTATTTTACTTTGTTAGA+GGG + chr7.3:60697202-60697221 None:intergenic 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr7.3:60697853-60697872 MS.gene20093:intron 20.0%
!!! TTTCTTATGTCCTTTTTTAT+TGG + chr7.3:60697498-60697517 None:intergenic 20.0%
! AAATGGAGTTAACAAATGAA+TGG + chr7.3:60698899-60698918 None:intergenic 25.0%
! AAGGACATAAGAAATTCATT+TGG - chr7.3:60697504-60697523 MS.gene20093:intron 25.0%
! AATCATAATTCTTCGCATTA+AGG + chr7.3:60700486-60700505 None:intergenic 25.0%
! AGTTGAAGGAAAAATTTAGA+TGG - chr7.3:60698310-60698329 MS.gene20093:CDS 25.0%
! TTATAGGAACTAAAAGTTGA+AGG - chr7.3:60698296-60698315 MS.gene20093:CDS 25.0%
! TTATAGGGACTAAAAGTTAA+AGG + chr7.3:60697953-60697972 None:intergenic 25.0%
! TTTCATTTGATAGGTACTAA+AGG + chr7.3:60697128-60697147 None:intergenic 25.0%
! TTTGATAGATATCATGAACT+GGG - chr7.3:60698602-60698621 MS.gene20093:intron 25.0%
!! AATTTACAATGTGTTTTCAG+GGG - chr7.3:60698485-60698504 MS.gene20093:intron 25.0%
!! ATATCTATCAAAACGTTTTC+CGG + chr7.3:60698594-60698613 None:intergenic 25.0%
!! CATATGAGTTTACTTTAAAG+AGG - chr7.3:60698249-60698268 MS.gene20093:CDS 25.0%
!! GAATTTACAATGTGTTTTCA+GGG - chr7.3:60698484-60698503 MS.gene20093:intron 25.0%
!! TTTTGATAGATATCATGAAC+TGG - chr7.3:60698601-60698620 MS.gene20093:intron 25.0%
!!! CAATTTGATTTTTTTGCAGT+CGG + chr7.3:60698762-60698781 None:intergenic 25.0%
!!! GCAATTTTTTGATTCTTAAG+AGG + chr7.3:60697171-60697190 None:intergenic 25.0%
!!! TATTGGTTTGATAACAGTTT+TGG + chr7.3:60697481-60697500 None:intergenic 25.0%
!!! TTTGTTGTTATCCATGTTAT+TGG - chr7.3:60699406-60699425 MS.gene20093:intron 25.0%
ACAGAACTGCGAATATTTAT+AGG - chr7.3:60700296-60700315 MS.gene20093:intron 30.0%
ACTTCAACAATAAGTTGTTG+TGG + chr7.3:60698671-60698690 None:intergenic 30.0%
AGAGGAACAAAAAATGAAGA+TGG - chr7.3:60698267-60698286 MS.gene20093:CDS 30.0%
ATTATACACGTTATGGCAAA+TGG - chr7.3:60698547-60698566 MS.gene20093:intron 30.0%
ATTGTACGAAATGTGTATGT+GGG - chr7.3:60699632-60699651 MS.gene20093:intron 30.0%
CAACAACTTATTGTTGAAGT+TGG - chr7.3:60698671-60698690 MS.gene20093:CDS 30.0%
CAGAACTGCGAATATTTATA+GGG - chr7.3:60700297-60700316 MS.gene20093:intron 30.0%
GAGGGATTAAAACGAAAAAT+TGG + chr7.3:60697921-60697940 None:intergenic 30.0%
GATTGATTAAAGACGGTAAA+TGG + chr7.3:60698916-60698935 None:intergenic 30.0%
GTTTCAATCATGTCAAATAC+TGG + chr7.3:60699563-60699582 None:intergenic 30.0%
TACAATAAAACGCAACATTG+TGG + chr7.3:60699618-60699637 None:intergenic 30.0%
TAGCTTACAAAGTATGTTGT+TGG + chr7.3:60699841-60699860 None:intergenic 30.0%
TATCACTTTCCATGAAGTTT+GGG - chr7.3:60697039-60697058 MS.gene20093:CDS 30.0%
TATTGTACGAAATGTGTATG+TGG - chr7.3:60699631-60699650 MS.gene20093:intron 30.0%
TCATCACATTATACACGTTA+TGG - chr7.3:60698540-60698559 MS.gene20093:intron 30.0%
TTATCACTTTCCATGAAGTT+TGG - chr7.3:60697038-60697057 MS.gene20093:CDS 30.0%
TTTGGTCCCTAAAATGTTTA+AGG - chr7.3:60700226-60700245 MS.gene20093:intron 30.0%
! ATATGCTTTTGGTGAAAAGT+TGG - chr7.3:60698628-60698647 MS.gene20093:intron 30.0%
! CAATTGTGTATTTGTTGAGT+TGG - chr7.3:60698462-60698481 MS.gene20093:intron 30.0%
! CAGAAATAGAGTTCAAGTTA+GGG + chr7.3:60698835-60698854 None:intergenic 30.0%
! GGAATTTACAATGTGTTTTC+AGG - chr7.3:60698483-60698502 MS.gene20093:intron 30.0%
! TATCTATCAAAACGTTTTCC+GGG + chr7.3:60698593-60698612 None:intergenic 30.0%
! TATGCTTTTGGTGAAAAGTT+GGG - chr7.3:60698629-60698648 MS.gene20093:intron 30.0%
! TTGATGCTTTTATCACCTAT+TGG - chr7.3:60700442-60700461 MS.gene20093:intron 30.0%
!! AACATTGACTTGGTCAAAAT+TGG + chr7.3:60697269-60697288 None:intergenic 30.0%
!! GCTATTACTTTTCCGTTTTT+CGG - chr7.3:60699778-60699797 MS.gene20093:intron 30.0%
!! GTTGATGGAAATTTTTGACA+AGG + chr7.3:60700203-60700222 None:intergenic 30.0%
AACATTGTCTACATGGTAAC+TGG - chr7.3:60698698-60698717 MS.gene20093:CDS 35.0%
AAGCAATTGTAGAGTAACTG+CGG + chr7.3:60699042-60699061 None:intergenic 35.0%
AATGGTTGAGATGCATGAAA+TGG - chr7.3:60698565-60698584 MS.gene20093:intron 35.0%
ATAAAACGCAACATTGTGGT+AGG + chr7.3:60699614-60699633 None:intergenic 35.0%
ATAATGTGATGAACCATGAG+AGG + chr7.3:60698532-60698551 None:intergenic 35.0%
ATATAGGTTTGCATTGTGCT+TGG - chr7.3:60700412-60700431 MS.gene20093:intron 35.0%
CAGTTACTCTACAATTGCTT+GGG - chr7.3:60699042-60699061 MS.gene20093:intron 35.0%
CCTAACTTGAACTCTATTTC+TGG - chr7.3:60698833-60698852 MS.gene20093:CDS 35.0%
GCACAAAGCTACAACTATAT+AGG + chr7.3:60699278-60699297 None:intergenic 35.0%
GCATTTCTTGACGAACTAAT+TGG + chr7.3:60697634-60697653 None:intergenic 35.0%
GTTCGTCAAGAAATGCAAAA+TGG - chr7.3:60697638-60697657 MS.gene20093:intron 35.0%
TAACAGTATTAGTCCTCTCA+TGG - chr7.3:60698516-60698535 MS.gene20093:intron 35.0%
TGACATGATTGAAACAGTGA+TGG - chr7.3:60699568-60699587 MS.gene20093:intron 35.0%
TGTATTGAAGTCACCTAATG+AGG + chr7.3:60697822-60697841 None:intergenic 35.0%
TTAGGGACCAAAAATGTTGA+TGG + chr7.3:60700218-60700237 None:intergenic 35.0%
! AAATAGAGTTCAAGTTAGGG+AGG + chr7.3:60698832-60698851 None:intergenic 35.0%
! ATGCTTTTATCACCTATTGG+AGG - chr7.3:60700445-60700464 MS.gene20093:intron 35.0%
! CCAGAAATAGAGTTCAAGTT+AGG + chr7.3:60698836-60698855 None:intergenic 35.0%
! CTCATTGGTTATTGGATGTT+TGG - chr7.3:60699313-60699332 MS.gene20093:intron 35.0%
! TGACTTTAGAGAAACCAAAC+TGG - chr7.3:60699362-60699381 MS.gene20093:intron 35.0%
! TGGTGTTAACATTGTCTACA+TGG - chr7.3:60698691-60698710 MS.gene20093:CDS 35.0%
!! AGCATTGACTTGGTCAAAAT+TGG - chr7.3:60697379-60697398 MS.gene20093:intron 35.0%
!! ATTACTTTTCCGTTTTTCGG+TGG - chr7.3:60699781-60699800 MS.gene20093:intron 35.0%
!! CTTTGAAATTGAGTTTCACC+TGG + chr7.3:60699438-60699457 None:intergenic 35.0%
AAAAGCGATACTTAGGAAGC+TGG - chr7.3:60697411-60697430 MS.gene20093:intron 40.0%
AAGAAACCAAAGACAGTTCC+TGG + chr7.3:60699130-60699149 None:intergenic 40.0%
ACACCGGAAAAACCATCTAA+GGG - chr7.3:60699226-60699245 MS.gene20093:intron 40.0%
AGAAACCAAAGACAGTTCCT+GGG + chr7.3:60699129-60699148 None:intergenic 40.0%
AGCAACAATTCCATCTACAC+CGG - chr7.3:60699210-60699229 MS.gene20093:intron 40.0%
AGGACTAATACTGTTACTCC+AGG + chr7.3:60698512-60698531 None:intergenic 40.0%
ATTCCACAATGTTACTGCCA+TGG - chr7.3:60697672-60697691 MS.gene20093:intron 40.0%
ATTGACCTCAATCCTCCAAT+AGG + chr7.3:60700460-60700479 None:intergenic 40.0%
ATTGCAAGCCACATTATGCA+TGG + chr7.3:60699945-60699964 None:intergenic 40.0%
ATTGTCTACATGGTAACTGG+AGG - chr7.3:60698701-60698720 MS.gene20093:CDS 40.0%
CAATAACCAATGAGAGCAAC+TGG + chr7.3:60699307-60699326 None:intergenic 40.0%
CGTCAAGAAATGCAAAATGG+TGG - chr7.3:60697641-60697660 MS.gene20093:intron 40.0%
CTAATAGCTCCCAAACTTCA+TGG + chr7.3:60697051-60697070 None:intergenic 40.0%
CTGAGACCAAAACTGCAAAA+GGG + chr7.3:60697245-60697264 None:intergenic 40.0%
GCAGTTACTCTACAATTGCT+TGG - chr7.3:60699041-60699060 MS.gene20093:intron 40.0%
GTACCTTAACGACATGATAG+CGG + chr7.3:60698873-60698892 None:intergenic 40.0%
GTGAGACAAGACAAAGTGAA+CGG + chr7.3:60698810-60698829 None:intergenic 40.0%
GTGTAGATGGAATTGTTGCT+TGG + chr7.3:60699210-60699229 None:intergenic 40.0%
TACACCGGAAAAACCATCTA+AGG - chr7.3:60699225-60699244 MS.gene20093:intron 40.0%
TACTTTCCAGTTGCTCTCAT+TGG - chr7.3:60699298-60699317 MS.gene20093:intron 40.0%
TATCACCTATTGGAGGATTG+AGG - chr7.3:60700452-60700471 MS.gene20093:intron 40.0%
TGACCAAGTCAATGTTAACG+TGG - chr7.3:60697273-60697292 MS.gene20093:intron 40.0%
TGAGACCAAAACTGCAAAAG+GGG + chr7.3:60697244-60697263 None:intergenic 40.0%
TTAACGCATGACTCCTCATT+AGG - chr7.3:60697806-60697825 MS.gene20093:intron 40.0%
TTCAGCTACCATGCATAATG+TGG - chr7.3:60699934-60699953 MS.gene20093:intron 40.0%
! ACCAAACTGGCTTATTGCAA+TGG - chr7.3:60699375-60699394 MS.gene20093:intron 40.0%
! AGACCACGTTAACATTGACT+TGG + chr7.3:60697279-60697298 None:intergenic 40.0%
! CAGTTGCTCTCATTGGTTAT+TGG - chr7.3:60699305-60699324 MS.gene20093:intron 40.0%
! GAACTGGGTCAATATGCTTT+TGG - chr7.3:60698617-60698636 MS.gene20093:intron 40.0%
! GACTTGGTCAAAATTGGTCT+GGG - chr7.3:60697385-60697404 MS.gene20093:intron 40.0%
! GGCAAAAAGCAATTGATGAC+TGG - chr7.3:60697605-60697624 MS.gene20093:intron 40.0%
! TCTGAGACCAAAACTGCAAA+AGG + chr7.3:60697246-60697265 None:intergenic 40.0%
! TTTGGTTTCTTCAATGCCCT+TGG - chr7.3:60699139-60699158 MS.gene20093:intron 40.0%
!! AGCTTCCTAAGTATCGCTTT+TGG + chr7.3:60697412-60697431 None:intergenic 40.0%
!! TGACTTGGTCAAAATTGGTC+TGG - chr7.3:60697384-60697403 MS.gene20093:intron 40.0%
!!! GGTCTACTAGGATTTTTTGG+TGG - chr7.3:60699802-60699821 MS.gene20093:CDS 40.0%
!!! GGTGGTCTACTAGGATTTTT+TGG - chr7.3:60699799-60699818 MS.gene20093:CDS 40.0%
AACCATCTAAGGGTCCTATG+TGG - chr7.3:60699236-60699255 MS.gene20093:intron 45.0%
AAGCAAAAGCCACATCTCCA+AGG + chr7.3:60699159-60699178 None:intergenic 45.0%
ACAATCACTCCTCTCCACAT+AGG + chr7.3:60699253-60699272 None:intergenic 45.0%
AGACAAGACAAAGTGAACGG+AGG + chr7.3:60698807-60698826 None:intergenic 45.0%
AGCAAAAGCCACATCTCCAA+GGG + chr7.3:60699158-60699177 None:intergenic 45.0%
CAAAAGGGGCAGTACTTAGA+GGG + chr7.3:60697230-60697249 None:intergenic 45.0%
CAACCATGGCAGTAACATTG+TGG + chr7.3:60697678-60697697 None:intergenic 45.0%
CAAGACAAGCTGAATCTCCT+TGG + chr7.3:60699975-60699994 None:intergenic 45.0%
CAAGGAGATTCAGCTTGTCT+TGG - chr7.3:60699973-60699992 MS.gene20093:intron 45.0%
CACAATGTTACTGCCATGGT+TGG - chr7.3:60697676-60697695 MS.gene20093:CDS 45.0%
CCATGTTATTGGAAGCTACC+AGG - chr7.3:60699417-60699436 MS.gene20093:intron 45.0%
CCTAGTAGACCACCGAAAAA+CGG + chr7.3:60699793-60699812 None:intergenic 45.0%
CCTGGTAGCTTCCAATAACA+TGG + chr7.3:60699420-60699439 None:intergenic 45.0%
GAAACCAAAGACAGTTCCTG+GGG + chr7.3:60699128-60699147 None:intergenic 45.0%
GAGATGCATGAAATGGTACC+CGG - chr7.3:60698572-60698591 MS.gene20093:intron 45.0%
GCAATGAACATTGTGAACGC+TGG + chr7.3:60699760-60699779 None:intergenic 45.0%
GCCATTGCAATAAGCCAGTT+TGG + chr7.3:60699379-60699398 None:intergenic 45.0%
GGCTTGCAATATACAAGCCA+AGG - chr7.3:60699955-60699974 MS.gene20093:intron 45.0%
TCTTAGTCTCCCTTATGCCA+TGG - chr7.3:60697708-60697727 MS.gene20093:CDS 45.0%
TGGGACCAAAAGCGATACTT+AGG - chr7.3:60697404-60697423 MS.gene20093:intron 45.0%
! GATGGTTTTTCCGGTGTAGA+TGG + chr7.3:60699223-60699242 None:intergenic 45.0%
! GATGTGGCTTTTGCTTATGC+TGG - chr7.3:60699163-60699182 MS.gene20093:intron 45.0%
! GGACCCTTAGATGGTTTTTC+CGG + chr7.3:60699232-60699251 None:intergenic 45.0%
! TACTGCCCCTTTTGCAGTTT+TGG - chr7.3:60697236-60697255 MS.gene20093:intron 45.0%
!!! ATGAATTTTTATATTTTTTA+TGG + chr7.3:60698127-60698146 None:intergenic 5.0%
!!! TTAAAAAATTCTAATTTTTT+GGG + chr7.3:60698075-60698094 None:intergenic 5.0%
AAGAACACCAGCTCCAACCA+TGG + chr7.3:60697692-60697711 None:intergenic 50.0%
ACTACCCCAGGAACTGTCTT+TGG - chr7.3:60699121-60699140 MS.gene20093:intron 50.0%
ATACCATCCAAGTTGCGCCA+TGG + chr7.3:60697728-60697747 None:intergenic 50.0%
CAAGTTGCGCCATGGCATAA+GGG + chr7.3:60697720-60697739 None:intergenic 50.0%
CTCCACATAGGACCCTTAGA+TGG + chr7.3:60699241-60699260 None:intergenic 50.0%
CTTCAATGCCCTTGGAGATG+TGG - chr7.3:60699147-60699166 MS.gene20093:intron 50.0%
GCAAAAGGGGCAGTACTTAG+AGG + chr7.3:60697231-60697250 None:intergenic 50.0%
GGAGATTCAGCTTGTCTTGG+TGG - chr7.3:60699976-60699995 MS.gene20093:intron 50.0%
GGGTGAAAATCGCAACTTCG+CGG - chr7.3:60697454-60697473 MS.gene20093:intron 50.0%
GGTGAAAATCGCAACTTCGC+GGG - chr7.3:60697455-60697474 MS.gene20093:intron 50.0%
TACAAAGCTACGACTACCCC+AGG - chr7.3:60699109-60699128 MS.gene20093:intron 50.0%
TCTAAGGGTCCTATGTGGAG+AGG - chr7.3:60699241-60699260 MS.gene20093:intron 50.0%
TGACCAAGTCAATGCTGACG+TGG + chr7.3:60697375-60697394 None:intergenic 50.0%
TGCTTATGCTGGACACAACG+TGG - chr7.3:60699174-60699193 MS.gene20093:intron 50.0%
TGGGCAGCTTCTGCTCATAA+AGG - chr7.3:60699061-60699080 MS.gene20093:intron 50.0%
!! CAATGTGTTTTCAGGGGTCC+TGG - chr7.3:60698491-60698510 MS.gene20093:intron 50.0%
!! CCGTTTTTCGGTGGTCTACT+AGG - chr7.3:60699790-60699809 MS.gene20093:CDS 50.0%
!! CCTTAACGACATGATAGCGG+CGG + chr7.3:60698870-60698889 None:intergenic 50.0%
ATGCCATGGCGCAACTTGGA+TGG - chr7.3:60697722-60697741 MS.gene20093:CDS 55.0%
CCAAGTTGCGCCATGGCATA+AGG + chr7.3:60697721-60697740 None:intergenic 55.0%
CCGCCGCTATCATGTCGTTA+AGG - chr7.3:60698867-60698886 MS.gene20093:CDS 55.0%
CCTTATGCCATGGCGCAACT+TGG - chr7.3:60697718-60697737 MS.gene20093:CDS 55.0%
GTTACTGCCATGGTTGGAGC+TGG - chr7.3:60697682-60697701 MS.gene20093:CDS 55.0%
!! CGTCCACGTCAGCATTGACT+TGG - chr7.3:60697369-60697388 MS.gene20093:intron 55.0%
AGGGGCAGTACTTAGAGGGC+CGG + chr7.3:60697226-60697245 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 60697009 60700516 60697009 ID=MS.gene20093
chr7.3 mRNA 60697009 60700516 60697009 ID=MS.gene20093.t1;Parent=MS.gene20093
chr7.3 exon 60700508 60700516 60700508 ID=MS.gene20093.t1.exon1;Parent=MS.gene20093.t1
chr7.3 CDS 60700508 60700516 60700508 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60699782 60699939 60699782 ID=MS.gene20093.t1.exon2;Parent=MS.gene20093.t1
chr7.3 CDS 60699782 60699939 60699782 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60698637 60699020 60698637 ID=MS.gene20093.t1.exon3;Parent=MS.gene20093.t1
chr7.3 CDS 60698637 60699020 60698637 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60698087 60698480 60698087 ID=MS.gene20093.t1.exon4;Parent=MS.gene20093.t1
chr7.3 CDS 60698087 60698480 60698087 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60697872 60697977 60697872 ID=MS.gene20093.t1.exon5;Parent=MS.gene20093.t1
chr7.3 CDS 60697872 60697977 60697872 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60697673 60697764 60697673 ID=MS.gene20093.t1.exon6;Parent=MS.gene20093.t1
chr7.3 CDS 60697673 60697764 60697673 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60697518 60697586 60697518 ID=MS.gene20093.t1.exon7;Parent=MS.gene20093.t1
chr7.3 CDS 60697518 60697586 60697518 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
chr7.3 exon 60697009 60697107 60697009 ID=MS.gene20093.t1.exon8;Parent=MS.gene20093.t1
chr7.3 CDS 60697009 60697107 60697009 ID=cds.MS.gene20093.t1;Parent=MS.gene20093.t1
Gene Sequence

>MS.gene20093

ATGCACTTGGTATGCAACTACAACTTTTGTTATCACTTTCCATGAAGTTTGGGAGCTATTAGAAGCAACTAATTTTTTATTTTTTTTTTAAAGTCAGAAGCAGCTACTCAAAAACGCCTTTAGTACCTATCAAATGAAAAAACTTAATAGCTGTTTTGGCCTCTTAAGAATCAAAAAATTGCGATTTTTGCCCTCTAACAAAGTAAAATACAATCCGGCCCTCTAAGTACTGCCCCTTTTGCAGTTTTGGTCTCAGACCAATTTTGACCAAGTCAATGTTAACGTGGTCTGTGTAATTTTTTAAATTTTTATTTTTTTATTTTTTTAATAATTAAAAAAATAAAAAAATTACACACATGGCGTCCACGTCAGCATTGACTTGGTCAAAATTGGTCTGGGACCAAAAGCGATACTTAGGAAGCTGGATTGTATTTTATTTTGTAAGGGGTGAAAATCGCAACTTCGCGGGCCAAAACTGTTATCAAACCAATAAAAAAGGACATAAGAAATTCATTTGGAAAAAAAATTCGTTTTGATTTTTTATTTTTCGGGTCACTGATTTTATTTATTGAAACAGATTGATGAAAAATTAAAGAGGCAAAAAGCAATTGATGACTGGCTTCCAATTAGTTCGTCAAGAAATGCAAAATGGTGGTATTCTGCATTCCACAATGTTACTGCCATGGTTGGAGCTGGTGTTCTTAGTCTCCCTTATGCCATGGCGCAACTTGGATGGTATATTTTTACTTGCATTTTCTACTTTTACTTTGCAAAGATTAAGCAGAAATTTAACACATTTAACGCATGACTCCTCATTAGGTGACTTCAATACATTTTCATATATTTTAGGGTTAAATATGTTTTTGGTCCCATCTCTAAAAAAAAATGTTTTTAGTCCCTATAAATATACCAATTTTTCGTTTTAATCCCTCTAAAATTTTCCTTTAACTTTTAGTCCCTATAAAATTTTCAATCACTACTTTTTGACCTTATTTTTAAGTTAATTTTTGTATTTTTTAATGAAATTGTGAAGAAATATGTAGAATATTGTAATAAAAAATTCCCCAAAAAATTAGAATTTTTTAACAAAATATAAATTAAATATGAATTTTTAACCATAAAAAATATAAAAATTCATATTAAATTCATGTTTTGTTAAAAAATTCTAATTTTGTTTAGGAGAGATTCTTATAATATTATGAATTTTTCTGCAAAATTTTATTCAAAAATATGAATTCTACATATGAGTTTACTTTAAAGAGGAACAAAAAATGAAGATGGAAAATTTTATAGGAACTAAAAGTTGAAGGAAAAATTTAGATGGACTAAAACGAAAAGTTGATATATTTTATAGGGACCAAAAACATATTTAACCCTATATTTTATGTCCAATGAATCTCAAAAATTGTTATTTATTGTCGTCGACTAAAAAAAGAACAACATATTTGACTATCAATTGTGTATTTGTTGAGTTGGAATTTACAATGTGTTTTCAGGGGTCCTGGAGTAACAGTATTAGTCCTCTCATGGTTCATCACATTATACACGTTATGGCAAATGGTTGAGATGCATGAAATGGTACCCGGAAAACGTTTTGATAGATATCATGAACTGGGTCAATATGCTTTTGGTGAAAAGTTGGGTCTCTATATTGTTGTGCCACAACAACTTATTGTTGAAGTTGGTGTTAACATTGTCTACATGGTAACTGGAGGAAAATCTTTGCAGAAGTTTCATGATACTGTTTGTTCCGACTGCAAAAAAATCAAATTGACTTACTTTATAATGATTTTCGCCTCCGTTCACTTTGTCTTGTCTCACCTCCCTAACTTGAACTCTATTTCTGGTGTCTCTTTAGCCGCCGCTATCATGTCGTTAAGGTACGTACCATTCATTTGTTAACTCCATTTACCGTCTTTAATCAATCAATATGAATGCTAAAGAATTTTTCTCTCTATACGATGAATCTTCATTTCTTTAATCATAAGAAAACATAATTTTCACATGTTAAATTTGACAATGATGTTTCTCCGCAGTTACTCTACAATTGCTTGGGCAGCTTCTGCTCATAAAGGTGTTATAGAAAATGTTGATTATGGTTACAAAGCTACGACTACCCCAGGAACTGTCTTTGGTTTCTTCAATGCCCTTGGAGATGTGGCTTTTGCTTATGCTGGACACAACGTGGTGTTAGAAATCCAAGCAACAATTCCATCTACACCGGAAAAACCATCTAAGGGTCCTATGTGGAGAGGAGTGATTGTAGCCTATATAGTTGTAGCTTTGTGCTACTTTCCAGTTGCTCTCATTGGTTATTGGATGTTTGGAAATAGTGTTGATGACAACATTCTCATGACTTTAGAGAAACCAAACTGGCTTATTGCAATGGCTAACATGTTTGTTGTTATCCATGTTATTGGAAGCTACCAGGTGAAACTCAATTTCAAAGTTCAAAAACTTTCAATTTTTAATTGACCCTTCTTTTTTTATAAAAACTTAATATTTTACTAAGATTGATCACTCTCTTTTGTAAATGTAGATCTATGCAATGCCAGTATTTGACATGATTGAAACAGTGATGGTAAAGAAGTTGAATTTCAAGCCTACCACAATGTTGCGTTTTATTGTACGAAATGTGTATGTGGGTAAGTATAAGCATTTTTAAAAAAATTAAGTTGATATATTACTTTTAGTTCATTTCATTTTTTTTAATCTCCAATATAAATTGACATATAATTTTTTATGATTCCAGCGTTCACAATGTTCATTGCTATTACTTTTCCGTTTTTCGGTGGTCTACTAGGATTTTTTGGTGGATTTGCTTTTGCTCCAACAACATACTTTGTAAGCTAACAACATTAGTGAACTTTGATCTAGTATGAGTTCTTATGATAAAACAACTTCAATTAATGGTTCGTTTAAATTTTCAGCTACCATGCATAATGTGGCTTGCAATATACAAGCCAAGGAGATTCAGCTTGTCTTGGTGGTGTAACTATGTAAGTTTGATTTTCATTTTAAATATTCTTCATTAAATCGTATTTTTTTAAGGGTTAATTAAGTAAATAGTCCCTATAAATATTCAGAATTTTGTTTTTTATCCTTACAAAATAAAATCACTTTTTAGTCCTTATAAATTTTTTCATCAGCATTTTTAGTCCCTATAAAAATTTTCTATCAGCATTTTTAGTCCTTGTCAAAAATTTCCATCAACATTTTTGGTCCCTAAAATGTTTAAGGAAAATGTCACAGAGACTAAAAAGTGTTATTTTATTTTGTAGGGACTAACAGAACTGCGAATATTTATAGGGACTAAAAATTTAATTAACACTTTTTTTTAATACTTGTTTTATTTTATTTTATTTTTTAATAAGAACCTGGTTTAATCTTTTTTTCATTGATAATATAGGTTTGCATTGTGCTTGGCTTATGTTTGATGCTTTTATCACCTATTGGAGGATTGAGGTCAATCATCCTTAATGCGAAGAATTATGATTTCTATTCTTAA

Protein sequence

>MS.gene20093.t1

MHLIDEKLKRQKAIDDWLPISSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMAQLGWGPGVTVLVLSWFITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLIVEVGVNIVYMVTGGKSLQKFHDTVCSDCKKIKLTYFIMIFASVHFVLSHLPNLNSISGVSLAAAIMSLSYSTIAWAASAHKGVIENVDYGYKATTTPGTVFGFFNALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALIGYWMFGNSVDDNILMTLEKPNWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVMVKKLNFKPTTMLRFIVRNVYVAFTMFIAITFPFFGGLLGFFGGFAFAPTTYFLPCIMWLAIYKPRRFSLSWWCNYVCIVLGLCLMLLSPIGGLRSIILNAKNYDFYS