Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24120.t1 | RHN77635.1 | 89.3 | 261 | 4 | 1 | 28 | 264 | 43 | 303 | 2.60E-124 | 454.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24120.t1 | Q94CH7 | 47.1 | 274 | 108 | 2 | 28 | 264 | 47 | 320 | 8.9e-65 | 248.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24120.t1 | G7I7S5 | 89.3 | 261 | 4 | 1 | 28 | 264 | 34 | 294 | 1.9e-124 | 454.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene24120 | 0.808138 | 3.59E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene24120 | 0.804483 | 2.11E-49 | -1.69E-46 |
| MS.gene049257 | MS.gene24120 | 0.801331 | 9.47E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene24120 | 0.810431 | 1.16E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene24120 | 0.80214 | 6.46E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene24120 | 0.812254 | 4.65E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene24120 | 0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene24120 | 0.812204 | 4.77E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene24120 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene24120 | 0.829299 | 5.56E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene24120 | 0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene051941 | MS.gene24120 | 0.812352 | 4.43E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene24120 | 0.802952 | 4.39E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene24120 | 0.810227 | 1.28E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene24120 | 0.805762 | 1.14E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene24120 | 0.801771 | 7.70E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene24120 | 0.862693 | 4.23E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene24120 | 0.856905 | 2.34E-62 | -1.69E-46 |
| MS.gene052505 | MS.gene24120 | 0.842451 | 2.57E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene24120 | 0.832488 | 9.19E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene24120 | 0.853683 | 2.03E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene24120 | 0.853045 | 3.10E-61 | -1.69E-46 |
| MS.gene052982 | MS.gene24120 | 0.812524 | 4.06E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene24120 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene053480 | MS.gene24120 | 0.85491 | 8.98E-62 | -1.69E-46 |
| MS.gene053632 | MS.gene24120 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene24120 | 0.822087 | 2.86E-53 | -1.69E-46 |
| MS.gene053873 | MS.gene24120 | 0.815951 | 7.10E-52 | -1.69E-46 |
| MS.gene054102 | MS.gene24120 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene24120 | 0.841558 | 4.42E-58 | -1.69E-46 |
| MS.gene054344 | MS.gene24120 | 0.841048 | 6.02E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene24120 | -0.822984 | 1.77E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene24120 | 0.813034 | 3.14E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene24120 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene24120 | 0.832913 | 7.21E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene24120 | 0.838687 | 2.48E-57 | -1.69E-46 |
| MS.gene055744 | MS.gene24120 | 0.833966 | 3.94E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene24120 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene24120 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene24120 | 0.825546 | 4.42E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene24120 | 0.800561 | 1.36E-48 | -1.69E-46 |
| MS.gene056514 | MS.gene24120 | 0.820768 | 5.76E-53 | -1.69E-46 |
| MS.gene056877 | MS.gene24120 | 0.850688 | 1.44E-60 | -1.69E-46 |
| MS.gene057019 | MS.gene24120 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene24120 | 0.839985 | 1.14E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene24120 | 0.83495 | 2.23E-56 | -1.69E-46 |
| MS.gene057196 | MS.gene24120 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene24120 | 0.832053 | 1.18E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene24120 | 0.842971 | 1.87E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene24120 | 0.826178 | 3.13E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene24120 | 0.827239 | 1.75E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene24120 | 0.800011 | 1.76E-48 | -1.69E-46 |
| MS.gene057856 | MS.gene24120 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene24120 | 0.828968 | 6.69E-55 | -1.69E-46 |
| MS.gene058338 | MS.gene24120 | 0.808373 | 3.20E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene24120 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene24120 | 0.807226 | 5.60E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene24120 | 0.868807 | 4.96E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene24120 | 0.805832 | 1.10E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene24120 | 0.841017 | 6.13E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene24120 | 0.821105 | 4.82E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene24120 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene24120 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene24120 | 0.820128 | 8.08E-53 | -1.69E-46 |
| MS.gene059512 | MS.gene24120 | 0.824721 | 6.92E-54 | -1.69E-46 |
| MS.gene059756 | MS.gene24120 | 0.815862 | 7.44E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene24120 | -0.808412 | 3.14E-50 | -1.69E-46 |
| MS.gene060485 | MS.gene24120 | 0.870019 | 2.00E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene24120 | 0.840611 | 7.83E-58 | -1.69E-46 |
| MS.gene061231 | MS.gene24120 | 0.82833 | 9.55E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24120.t1 | MTR_1g025680 | 89.272 | 261 | 4 | 1 | 28 | 264 | 34 | 294 | 3.25e-161 | 456 |
| MS.gene24120.t1 | MTR_3g114090 | 68.199 | 261 | 59 | 1 | 28 | 264 | 36 | 296 | 5.23e-124 | 357 |
| MS.gene24120.t1 | MTR_1g025700 | 68.582 | 261 | 57 | 2 | 28 | 264 | 50 | 309 | 3.13e-122 | 353 |
| MS.gene24120.t1 | MTR_1g025720 | 65.517 | 261 | 65 | 2 | 28 | 264 | 37 | 296 | 5.94e-117 | 340 |
| MS.gene24120.t1 | MTR_1g025780 | 62.835 | 261 | 71 | 3 | 28 | 264 | 41 | 299 | 3.24e-110 | 323 |
| MS.gene24120.t1 | MTR_1g025760 | 62.264 | 265 | 74 | 3 | 28 | 267 | 80 | 343 | 1.08e-107 | 318 |
| MS.gene24120.t1 | MTR_3g114120 | 59.387 | 261 | 81 | 2 | 28 | 264 | 47 | 306 | 1.16e-107 | 316 |
| MS.gene24120.t1 | MTR_5g022630 | 49.618 | 262 | 107 | 2 | 28 | 264 | 43 | 304 | 5.62e-82 | 251 |
| MS.gene24120.t1 | MTR_8g075230 | 48.659 | 261 | 109 | 2 | 28 | 264 | 36 | 295 | 2.14e-81 | 249 |
| MS.gene24120.t1 | MTR_8g075200 | 47.126 | 261 | 113 | 2 | 28 | 264 | 41 | 300 | 7.60e-78 | 241 |
| MS.gene24120.t1 | MTR_5g022640 | 46.565 | 262 | 114 | 3 | 28 | 264 | 43 | 303 | 3.60e-76 | 236 |
| MS.gene24120.t1 | MTR_8g075220 | 47.368 | 266 | 110 | 4 | 28 | 264 | 40 | 304 | 6.86e-76 | 235 |
| MS.gene24120.t1 | MTR_6g034400 | 79.508 | 122 | 25 | 0 | 81 | 202 | 3 | 124 | 1.77e-65 | 201 |
| MS.gene24120.t1 | MTR_1g025910 | 42.023 | 257 | 121 | 5 | 33 | 264 | 41 | 294 | 8.37e-59 | 191 |
| MS.gene24120.t1 | MTR_5g084750 | 37.165 | 261 | 139 | 2 | 28 | 264 | 30 | 289 | 1.07e-55 | 183 |
| MS.gene24120.t1 | MTR_5g084770 | 36.140 | 285 | 154 | 4 | 5 | 264 | 7 | 288 | 6.78e-53 | 176 |
| MS.gene24120.t1 | MTR_4g087985 | 36.027 | 297 | 143 | 6 | 12 | 268 | 15 | 304 | 1.37e-52 | 175 |
| MS.gene24120.t1 | MTR_3g082830 | 38.697 | 261 | 135 | 4 | 28 | 264 | 38 | 297 | 4.75e-52 | 174 |
| MS.gene24120.t1 | MTR_3g464730 | 37.405 | 262 | 138 | 4 | 28 | 264 | 28 | 288 | 1.63e-50 | 169 |
| MS.gene24120.t1 | MTR_5g084790 | 38.314 | 261 | 136 | 4 | 28 | 264 | 32 | 291 | 3.03e-50 | 169 |
| MS.gene24120.t1 | MTR_2g015080 | 36.567 | 268 | 135 | 5 | 31 | 264 | 41 | 307 | 5.84e-50 | 169 |
| MS.gene24120.t1 | MTR_5g074270 | 35.227 | 264 | 143 | 3 | 28 | 264 | 33 | 295 | 7.37e-47 | 160 |
| MS.gene24120.t1 | MTR_8g014910 | 34.483 | 261 | 146 | 2 | 28 | 264 | 32 | 291 | 4.56e-45 | 155 |
| MS.gene24120.t1 | MTR_5g083040 | 33.455 | 275 | 150 | 4 | 21 | 264 | 25 | 297 | 3.57e-43 | 150 |
| MS.gene24120.t1 | MTR_2g100620 | 32.184 | 261 | 152 | 2 | 28 | 264 | 31 | 290 | 7.60e-40 | 142 |
| MS.gene24120.t1 | MTR_2g084585 | 33.585 | 265 | 147 | 6 | 28 | 266 | 30 | 291 | 1.08e-39 | 141 |
| MS.gene24120.t1 | MTR_4g056280 | 33.969 | 262 | 146 | 4 | 28 | 264 | 30 | 289 | 4.27e-39 | 140 |
| MS.gene24120.t1 | MTR_4g056160 | 30.534 | 262 | 156 | 2 | 28 | 264 | 27 | 287 | 3.30e-36 | 132 |
| MS.gene24120.t1 | MTR_1g079540 | 32.423 | 293 | 167 | 6 | 1 | 264 | 1 | 291 | 7.79e-36 | 131 |
| MS.gene24120.t1 | MTR_7g116520 | 34.340 | 265 | 146 | 5 | 26 | 264 | 32 | 294 | 4.54e-35 | 129 |
| MS.gene24120.t1 | MTR_1g079530 | 36.402 | 239 | 124 | 5 | 26 | 238 | 27 | 263 | 5.12e-35 | 129 |
| MS.gene24120.t1 | MTR_7g116570 | 33.708 | 267 | 145 | 7 | 26 | 264 | 32 | 294 | 8.28e-34 | 126 |
| MS.gene24120.t1 | MTR_7g116500 | 32.993 | 294 | 161 | 7 | 3 | 264 | 4 | 293 | 4.24e-33 | 124 |
| MS.gene24120.t1 | MTR_8g087890 | 32.319 | 263 | 145 | 7 | 30 | 264 | 33 | 290 | 5.16e-33 | 124 |
| MS.gene24120.t1 | MTR_1g079590 | 39.106 | 179 | 104 | 4 | 27 | 202 | 30 | 206 | 5.69e-33 | 120 |
| MS.gene24120.t1 | MTR_1g069175 | 32.830 | 265 | 150 | 5 | 27 | 264 | 32 | 295 | 2.95e-32 | 122 |
| MS.gene24120.t1 | MTR_7g116510 | 34.717 | 265 | 144 | 5 | 27 | 264 | 24 | 286 | 3.64e-32 | 121 |
| MS.gene24120.t1 | MTR_0565s0010 | 32.576 | 264 | 144 | 9 | 30 | 264 | 34 | 292 | 8.67e-32 | 120 |
| MS.gene24120.t1 | MTR_5g078210 | 30.651 | 261 | 152 | 5 | 31 | 265 | 28 | 285 | 1.09e-31 | 119 |
| MS.gene24120.t1 | MTR_1g024890 | 33.333 | 264 | 148 | 5 | 27 | 264 | 31 | 292 | 1.35e-31 | 120 |
| MS.gene24120.t1 | MTR_5g078210 | 30.769 | 260 | 151 | 5 | 31 | 264 | 28 | 284 | 2.58e-31 | 119 |
| MS.gene24120.t1 | MTR_3g098270 | 31.835 | 267 | 151 | 6 | 27 | 264 | 33 | 297 | 3.00e-31 | 119 |
| MS.gene24120.t1 | MTR_8g087870 | 33.065 | 248 | 135 | 6 | 28 | 248 | 29 | 272 | 9.58e-31 | 117 |
| MS.gene24120.t1 | MTR_8g079050 | 32.721 | 272 | 143 | 9 | 28 | 264 | 37 | 303 | 1.06e-30 | 118 |
| MS.gene24120.t1 | MTR_6g021530 | 32.210 | 267 | 152 | 6 | 25 | 264 | 26 | 290 | 5.34e-30 | 115 |
| MS.gene24120.t1 | MTR_4g019880 | 31.597 | 288 | 164 | 7 | 8 | 264 | 9 | 294 | 6.63e-30 | 115 |
| MS.gene24120.t1 | MTR_3g024510 | 33.333 | 264 | 141 | 9 | 30 | 264 | 40 | 297 | 7.05e-30 | 115 |
| MS.gene24120.t1 | MTR_3g005650 | 33.206 | 262 | 144 | 8 | 28 | 264 | 30 | 285 | 3.28e-29 | 114 |
| MS.gene24120.t1 | MTR_7g008060 | 31.321 | 265 | 141 | 6 | 26 | 264 | 31 | 280 | 1.76e-28 | 111 |
| MS.gene24120.t1 | MTR_4g035353 | 31.502 | 273 | 157 | 6 | 18 | 263 | 21 | 290 | 1.19e-27 | 109 |
| MS.gene24120.t1 | MTR_2g033930 | 33.333 | 267 | 144 | 9 | 26 | 264 | 30 | 290 | 1.64e-27 | 109 |
| MS.gene24120.t1 | MTR_2g017915 | 35.652 | 230 | 136 | 8 | 28 | 249 | 33 | 258 | 3.21e-27 | 108 |
| MS.gene24120.t1 | MTR_4g036375 | 36.242 | 149 | 94 | 1 | 28 | 176 | 30 | 177 | 4.87e-27 | 104 |
| MS.gene24120.t1 | MTR_5g009100 | 31.801 | 261 | 150 | 7 | 30 | 264 | 48 | 306 | 5.87e-27 | 108 |
| MS.gene24120.t1 | MTR_2g017875 | 34.135 | 208 | 129 | 6 | 13 | 215 | 19 | 223 | 2.21e-26 | 106 |
| MS.gene24120.t1 | MTR_2g033920 | 30.370 | 270 | 156 | 7 | 27 | 268 | 34 | 299 | 1.28e-25 | 103 |
| MS.gene24120.t1 | MTR_2g017925 | 43.333 | 150 | 79 | 5 | 28 | 175 | 33 | 178 | 5.59e-25 | 102 |
| MS.gene24120.t1 | MTR_3g052480 | 33.209 | 268 | 144 | 7 | 28 | 264 | 33 | 296 | 5.61e-25 | 102 |
| MS.gene24120.t1 | MTR_2g033920 | 30.451 | 266 | 153 | 7 | 27 | 264 | 34 | 295 | 7.99e-25 | 102 |
| MS.gene24120.t1 | MTR_2g017955 | 36.649 | 191 | 113 | 6 | 28 | 214 | 33 | 219 | 8.84e-25 | 102 |
| MS.gene24120.t1 | MTR_3g052490 | 32.197 | 264 | 151 | 4 | 28 | 264 | 32 | 294 | 3.17e-24 | 100 |
| MS.gene24120.t1 | MTR_2g017965 | 37.158 | 183 | 102 | 5 | 7 | 179 | 4 | 183 | 4.35e-24 | 100 |
| MS.gene24120.t1 | MTR_5g093090 | 32.453 | 265 | 149 | 6 | 28 | 264 | 28 | 290 | 4.38e-24 | 99.0 |
| MS.gene24120.t1 | MTR_4g122200 | 31.955 | 266 | 147 | 8 | 28 | 264 | 35 | 295 | 8.26e-24 | 99.4 |
| MS.gene24120.t1 | MTR_5g093090 | 32.453 | 265 | 149 | 6 | 28 | 264 | 28 | 290 | 1.12e-23 | 99.0 |
| MS.gene24120.t1 | MTR_0009s0250 | 32.819 | 259 | 145 | 11 | 28 | 264 | 33 | 284 | 1.61e-23 | 98.2 |
| MS.gene24120.t1 | MTR_3g023220 | 31.276 | 243 | 138 | 8 | 28 | 246 | 33 | 270 | 1.87e-23 | 98.2 |
| MS.gene24120.t1 | MTR_3g435540 | 28.897 | 263 | 161 | 5 | 30 | 267 | 25 | 286 | 2.15e-23 | 98.2 |
| MS.gene24120.t1 | MTR_5g093090 | 39.130 | 161 | 90 | 3 | 28 | 181 | 28 | 187 | 6.79e-23 | 94.0 |
| MS.gene24120.t1 | MTR_3g005660 | 29.851 | 268 | 149 | 9 | 30 | 264 | 38 | 299 | 9.08e-23 | 96.3 |
| MS.gene24120.t1 | MTR_8g031430 | 30.418 | 263 | 146 | 8 | 28 | 264 | 37 | 288 | 1.35e-22 | 95.9 |
| MS.gene24120.t1 | MTR_8g031420 | 29.434 | 265 | 150 | 8 | 26 | 264 | 33 | 286 | 2.71e-22 | 95.1 |
| MS.gene24120.t1 | MTR_2g044100 | 32.812 | 192 | 123 | 4 | 21 | 211 | 36 | 222 | 5.16e-22 | 94.7 |
| MS.gene24120.t1 | MTR_3g052580 | 31.955 | 266 | 148 | 7 | 28 | 264 | 28 | 289 | 6.49e-22 | 94.4 |
| MS.gene24120.t1 | MTR_3g052580 | 31.955 | 266 | 148 | 7 | 28 | 264 | 27 | 288 | 8.53e-22 | 94.0 |
| MS.gene24120.t1 | MTR_4g108690 | 28.244 | 262 | 162 | 6 | 31 | 267 | 30 | 290 | 1.25e-21 | 93.2 |
| MS.gene24120.t1 | MTR_8g022810 | 31.132 | 212 | 133 | 6 | 12 | 215 | 18 | 224 | 2.46e-21 | 91.7 |
| MS.gene24120.t1 | MTR_8g022810 | 31.132 | 212 | 133 | 6 | 12 | 215 | 18 | 224 | 3.25e-21 | 92.0 |
| MS.gene24120.t1 | MTR_3g069780 | 28.369 | 282 | 159 | 10 | 18 | 264 | 20 | 293 | 4.80e-20 | 89.0 |
| MS.gene24120.t1 | MTR_8g031400 | 29.278 | 263 | 149 | 8 | 28 | 264 | 37 | 288 | 5.60e-20 | 88.6 |
| MS.gene24120.t1 | MTR_2g018015 | 35.533 | 197 | 110 | 8 | 28 | 215 | 36 | 224 | 1.64e-19 | 86.7 |
| MS.gene24120.t1 | MTR_3g438030 | 27.758 | 281 | 162 | 8 | 18 | 264 | 20 | 293 | 1.88e-19 | 87.0 |
| MS.gene24120.t1 | MTR_3g463930 | 27.090 | 299 | 158 | 10 | 14 | 264 | 30 | 316 | 2.70e-19 | 87.0 |
| MS.gene24120.t1 | MTR_3g463960 | 27.055 | 292 | 160 | 10 | 14 | 264 | 30 | 309 | 7.31e-19 | 85.5 |
| MS.gene24120.t1 | MTR_3g463950 | 27.055 | 292 | 160 | 10 | 14 | 264 | 30 | 309 | 7.31e-19 | 85.5 |
| MS.gene24120.t1 | MTR_3g463970 | 27.055 | 292 | 160 | 10 | 14 | 264 | 30 | 309 | 7.31e-19 | 85.5 |
| MS.gene24120.t1 | MTR_3g463940 | 27.055 | 292 | 160 | 10 | 14 | 264 | 30 | 309 | 7.31e-19 | 85.5 |
| MS.gene24120.t1 | MTR_8g031390 | 28.137 | 263 | 151 | 9 | 28 | 264 | 37 | 287 | 2.07e-18 | 83.6 |
| MS.gene24120.t1 | MTR_8g031390 | 28.137 | 263 | 151 | 9 | 28 | 264 | 37 | 287 | 2.36e-18 | 84.0 |
| MS.gene24120.t1 | MTR_8g022790 | 27.645 | 293 | 173 | 8 | 5 | 264 | 8 | 294 | 3.31e-18 | 83.6 |
| MS.gene24120.t1 | MTR_8g074580 | 33.939 | 165 | 102 | 4 | 12 | 170 | 28 | 191 | 3.62e-18 | 84.0 |
| MS.gene24120.t1 | MTR_3g021460 | 35.751 | 193 | 113 | 9 | 28 | 215 | 31 | 217 | 6.05e-18 | 82.8 |
| MS.gene24120.t1 | MTR_6g049220 | 47.191 | 89 | 46 | 1 | 28 | 116 | 30 | 117 | 1.94e-17 | 78.2 |
| MS.gene24120.t1 | MTR_1g030268 | 28.904 | 301 | 159 | 13 | 5 | 267 | 23 | 306 | 3.37e-17 | 80.5 |
| MS.gene24120.t1 | MTR_1g030268 | 28.859 | 298 | 157 | 13 | 5 | 264 | 23 | 303 | 6.95e-17 | 80.1 |
| MS.gene24120.t1 | MTR_2g461580 | 34.104 | 173 | 102 | 5 | 5 | 175 | 15 | 177 | 7.06e-17 | 79.7 |
| MS.gene24120.t1 | MTR_1g030275 | 28.136 | 295 | 157 | 12 | 8 | 264 | 25 | 302 | 3.38e-16 | 77.8 |
| MS.gene24120.t1 | MTR_2g015580 | 28.364 | 275 | 157 | 9 | 27 | 264 | 46 | 317 | 3.62e-16 | 77.8 |
| MS.gene24120.t1 | MTR_2g079080 | 27.972 | 286 | 165 | 9 | 13 | 264 | 15 | 293 | 6.44e-16 | 77.0 |
| MS.gene24120.t1 | MTR_2g079090 | 27.972 | 286 | 165 | 9 | 13 | 264 | 15 | 293 | 6.76e-16 | 77.0 |
| MS.gene24120.t1 | MTR_2g087292 | 30.417 | 240 | 125 | 9 | 28 | 264 | 33 | 233 | 2.09e-15 | 74.7 |
| MS.gene24120.t1 | MTR_8g074570 | 33.108 | 148 | 92 | 3 | 29 | 170 | 39 | 185 | 2.88e-15 | 75.1 |
| MS.gene24120.t1 | MTR_2g043980 | 27.305 | 282 | 159 | 10 | 20 | 264 | 26 | 298 | 4.87e-14 | 71.6 |
| MS.gene24120.t1 | MTR_2g015630 | 27.839 | 273 | 150 | 10 | 33 | 264 | 36 | 302 | 8.23e-14 | 70.9 |
| MS.gene24120.t1 | MTR_5g062890 | 52.727 | 55 | 26 | 0 | 28 | 82 | 28 | 82 | 5.11e-12 | 61.2 |
| MS.gene24120.t1 | MTR_1g060490 | 26.087 | 253 | 150 | 10 | 27 | 257 | 36 | 273 | 6.13e-12 | 65.5 |
| MS.gene24120.t1 | MTR_7g104220 | 30.366 | 191 | 114 | 8 | 25 | 214 | 39 | 211 | 6.73e-12 | 65.1 |
| MS.gene24120.t1 | MTR_8g074560 | 33.908 | 174 | 99 | 6 | 11 | 170 | 7 | 178 | 1.14e-11 | 64.7 |
| MS.gene24120.t1 | MTR_6g007100 | 24.286 | 280 | 167 | 8 | 19 | 264 | 24 | 292 | 2.10e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24120.t1 | AT1G75890 | 49.425 | 261 | 108 | 1 | 28 | 264 | 47 | 307 | 2.14e-84 | 257 |
| MS.gene24120.t1 | AT1G75890 | 49.425 | 261 | 108 | 1 | 28 | 264 | 76 | 336 | 3.38e-84 | 258 |
| MS.gene24120.t1 | AT1G75890 | 47.080 | 274 | 108 | 2 | 28 | 264 | 47 | 320 | 8.33e-81 | 248 |
| MS.gene24120.t1 | AT1G75900 | 49.057 | 265 | 109 | 3 | 24 | 264 | 39 | 301 | 1.01e-80 | 248 |
| MS.gene24120.t1 | AT1G75880 | 47.510 | 261 | 112 | 2 | 28 | 264 | 52 | 311 | 8.03e-78 | 240 |
| MS.gene24120.t1 | AT1G75880 | 47.328 | 262 | 112 | 3 | 28 | 264 | 52 | 312 | 4.93e-76 | 236 |
| MS.gene24120.t1 | AT3G14820 | 47.893 | 261 | 107 | 4 | 28 | 264 | 32 | 287 | 2.70e-74 | 231 |
| MS.gene24120.t1 | AT5G42170 | 46.360 | 261 | 112 | 3 | 28 | 264 | 50 | 306 | 2.04e-73 | 229 |
| MS.gene24120.t1 | AT1G20120 | 42.652 | 279 | 132 | 3 | 10 | 264 | 63 | 337 | 4.74e-70 | 221 |
| MS.gene24120.t1 | AT3G43550 | 42.857 | 287 | 131 | 6 | 5 | 266 | 10 | 288 | 2.92e-67 | 211 |
| MS.gene24120.t1 | AT1G20132 | 44.061 | 261 | 121 | 2 | 28 | 264 | 61 | 320 | 4.47e-65 | 208 |
| MS.gene24120.t1 | AT1G59406 | 45.038 | 262 | 114 | 5 | 28 | 264 | 30 | 286 | 4.59e-65 | 207 |
| MS.gene24120.t1 | AT1G59030 | 45.038 | 262 | 114 | 5 | 28 | 264 | 30 | 286 | 4.59e-65 | 207 |
| MS.gene24120.t1 | AT1G58725 | 45.038 | 262 | 114 | 5 | 28 | 264 | 30 | 286 | 4.59e-65 | 207 |
| MS.gene24120.t1 | AT3G43570 | 46.835 | 237 | 117 | 4 | 28 | 264 | 30 | 257 | 1.46e-64 | 205 |
| MS.gene24120.t1 | AT1G58520 | 44.656 | 262 | 115 | 5 | 28 | 264 | 30 | 286 | 3.35e-63 | 202 |
| MS.gene24120.t1 | AT1G58525 | 44.656 | 262 | 115 | 5 | 28 | 264 | 30 | 286 | 3.35e-63 | 202 |
| MS.gene24120.t1 | AT1G73610 | 40.541 | 259 | 132 | 3 | 27 | 264 | 34 | 291 | 1.60e-62 | 200 |
| MS.gene24120.t1 | AT5G63170 | 40.927 | 259 | 130 | 3 | 28 | 264 | 28 | 285 | 2.94e-59 | 192 |
| MS.gene24120.t1 | AT2G31540 | 39.544 | 263 | 133 | 2 | 28 | 264 | 35 | 297 | 2.34e-56 | 185 |
| MS.gene24120.t1 | AT1G20135 | 39.615 | 260 | 133 | 3 | 28 | 264 | 29 | 287 | 8.40e-56 | 182 |
| MS.gene24120.t1 | AT2G04570 | 37.762 | 286 | 152 | 4 | 4 | 264 | 3 | 287 | 1.87e-55 | 182 |
| MS.gene24120.t1 | AT1G23500 | 42.366 | 262 | 122 | 4 | 28 | 264 | 35 | 292 | 2.02e-55 | 182 |
| MS.gene24120.t1 | AT1G20130 | 40.299 | 268 | 128 | 3 | 28 | 264 | 184 | 450 | 4.64e-55 | 185 |
| MS.gene24120.t1 | AT1G20130 | 40.299 | 268 | 128 | 3 | 28 | 264 | 204 | 470 | 7.53e-55 | 185 |
| MS.gene24120.t1 | AT1G58430 | 39.394 | 264 | 132 | 3 | 28 | 264 | 35 | 297 | 1.11e-53 | 178 |
| MS.gene24120.t1 | AT2G40250 | 36.940 | 268 | 135 | 5 | 28 | 264 | 36 | 300 | 1.09e-52 | 175 |
| MS.gene24120.t1 | AT1G06990 | 35.165 | 273 | 150 | 2 | 18 | 264 | 27 | 298 | 1.75e-51 | 172 |
| MS.gene24120.t1 | AT1G75920 | 41.132 | 265 | 125 | 5 | 28 | 264 | 29 | 290 | 8.68e-51 | 170 |
| MS.gene24120.t1 | AT2G30220 | 36.996 | 273 | 144 | 3 | 19 | 264 | 24 | 295 | 1.18e-50 | 170 |
| MS.gene24120.t1 | AT5G45960 | 37.218 | 266 | 137 | 4 | 28 | 264 | 47 | 311 | 1.04e-49 | 168 |
| MS.gene24120.t1 | AT2G30310 | 36.502 | 263 | 141 | 2 | 28 | 264 | 34 | 296 | 6.35e-49 | 166 |
| MS.gene24120.t1 | AT2G24560 | 35.227 | 264 | 143 | 3 | 28 | 264 | 34 | 296 | 2.37e-48 | 163 |
| MS.gene24120.t1 | AT2G42990 | 35.789 | 285 | 156 | 5 | 6 | 264 | 4 | 287 | 2.76e-48 | 164 |
| MS.gene24120.t1 | AT2G24560 | 35.227 | 264 | 143 | 3 | 28 | 264 | 34 | 296 | 7.73e-48 | 163 |
| MS.gene24120.t1 | AT1G75910 | 38.636 | 264 | 134 | 4 | 28 | 264 | 28 | 290 | 2.19e-47 | 161 |
| MS.gene24120.t1 | AT4G26790 | 34.483 | 261 | 146 | 2 | 28 | 264 | 29 | 288 | 3.14e-47 | 161 |
| MS.gene24120.t1 | AT4G26790 | 34.483 | 261 | 146 | 2 | 28 | 264 | 29 | 288 | 3.14e-47 | 161 |
| MS.gene24120.t1 | AT5G03810 | 35.055 | 271 | 150 | 3 | 19 | 264 | 21 | 290 | 8.48e-47 | 160 |
| MS.gene24120.t1 | AT1G75920 | 38.929 | 280 | 125 | 6 | 28 | 264 | 24 | 300 | 9.54e-47 | 160 |
| MS.gene24120.t1 | AT1G75920 | 37.109 | 256 | 131 | 4 | 37 | 264 | 9 | 262 | 2.62e-42 | 147 |
| MS.gene24120.t1 | AT3G16370 | 32.567 | 261 | 151 | 2 | 28 | 264 | 30 | 289 | 3.78e-41 | 145 |
| MS.gene24120.t1 | AT5G03820 | 32.946 | 258 | 146 | 2 | 28 | 259 | 33 | 289 | 7.73e-39 | 139 |
| MS.gene24120.t1 | AT5G03820 | 32.946 | 258 | 146 | 2 | 28 | 259 | 61 | 317 | 1.36e-38 | 139 |
| MS.gene24120.t1 | AT1G75930 | 37.269 | 271 | 140 | 9 | 20 | 264 | 24 | 290 | 2.21e-37 | 135 |
| MS.gene24120.t1 | AT5G22810 | 30.241 | 291 | 170 | 6 | 4 | 264 | 9 | 296 | 3.75e-37 | 135 |
| MS.gene24120.t1 | AT5G45950 | 31.273 | 275 | 162 | 5 | 12 | 264 | 26 | 295 | 1.24e-36 | 133 |
| MS.gene24120.t1 | AT5G33370 | 33.333 | 264 | 148 | 5 | 27 | 264 | 29 | 290 | 1.25e-33 | 125 |
| MS.gene24120.t1 | AT5G33370 | 33.333 | 264 | 148 | 5 | 27 | 264 | 29 | 290 | 3.68e-33 | 124 |
| MS.gene24120.t1 | AT5G18430 | 38.211 | 246 | 133 | 7 | 27 | 262 | 27 | 263 | 3.89e-33 | 124 |
| MS.gene24120.t1 | AT1G75920 | 34.340 | 265 | 112 | 6 | 28 | 264 | 29 | 259 | 2.44e-32 | 121 |
| MS.gene24120.t1 | AT3G53100 | 29.066 | 289 | 175 | 3 | 5 | 264 | 1 | 288 | 4.62e-32 | 121 |
| MS.gene24120.t1 | AT1G29670 | 35.878 | 262 | 136 | 10 | 30 | 264 | 34 | 290 | 5.02e-32 | 121 |
| MS.gene24120.t1 | AT1G29670 | 35.878 | 262 | 136 | 10 | 30 | 264 | 102 | 358 | 7.51e-32 | 122 |
| MS.gene24120.t1 | AT4G28780 | 30.714 | 280 | 162 | 6 | 11 | 264 | 18 | 291 | 7.32e-31 | 118 |
| MS.gene24120.t1 | AT3G04290 | 32.197 | 264 | 151 | 5 | 27 | 264 | 28 | 289 | 1.13e-30 | 117 |
| MS.gene24120.t1 | AT1G29660 | 32.319 | 263 | 145 | 9 | 30 | 264 | 34 | 291 | 6.53e-30 | 115 |
| MS.gene24120.t1 | AT3G50400 | 32.714 | 269 | 148 | 7 | 28 | 264 | 34 | 301 | 1.08e-29 | 115 |
| MS.gene24120.t1 | AT5G45670 | 31.599 | 269 | 150 | 8 | 25 | 264 | 26 | 289 | 2.38e-29 | 114 |
| MS.gene24120.t1 | AT4G18970 | 31.716 | 268 | 151 | 7 | 25 | 264 | 25 | 288 | 3.77e-29 | 113 |
| MS.gene24120.t1 | AT2G23540 | 30.970 | 268 | 153 | 7 | 28 | 264 | 48 | 314 | 4.09e-29 | 114 |
| MS.gene24120.t1 | AT4G18970 | 31.716 | 268 | 151 | 7 | 25 | 264 | 25 | 288 | 5.58e-29 | 114 |
| MS.gene24120.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 28 | 256 | 43 | 289 | 1.08e-28 | 112 |
| MS.gene24120.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 28 | 256 | 43 | 289 | 1.08e-28 | 112 |
| MS.gene24120.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 28 | 256 | 43 | 289 | 1.08e-28 | 112 |
| MS.gene24120.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 28 | 256 | 43 | 289 | 1.08e-28 | 112 |
| MS.gene24120.t1 | AT5G08460 | 32.210 | 267 | 149 | 6 | 28 | 264 | 49 | 313 | 2.16e-28 | 112 |
| MS.gene24120.t1 | AT2G19010 | 31.429 | 280 | 148 | 10 | 1 | 251 | 5 | 269 | 3.04e-28 | 110 |
| MS.gene24120.t1 | AT2G19010 | 31.429 | 280 | 148 | 10 | 1 | 251 | 35 | 299 | 4.40e-28 | 111 |
| MS.gene24120.t1 | AT2G04020 | 41.935 | 186 | 81 | 9 | 28 | 203 | 43 | 211 | 1.40e-27 | 107 |
| MS.gene24120.t1 | AT2G19050 | 31.048 | 248 | 135 | 10 | 30 | 251 | 33 | 270 | 3.34e-27 | 107 |
| MS.gene24120.t1 | AT5G37690 | 29.278 | 263 | 151 | 6 | 31 | 264 | 30 | 286 | 4.44e-27 | 108 |
| MS.gene24120.t1 | AT2G04020 | 41.935 | 186 | 81 | 9 | 28 | 203 | 43 | 211 | 9.45e-27 | 106 |
| MS.gene24120.t1 | AT2G19050 | 30.952 | 252 | 130 | 10 | 30 | 251 | 33 | 270 | 1.03e-26 | 107 |
| MS.gene24120.t1 | AT4G10950 | 29.167 | 264 | 157 | 7 | 28 | 264 | 71 | 331 | 1.57e-26 | 107 |
| MS.gene24120.t1 | AT5G41890 | 32.222 | 270 | 145 | 9 | 30 | 264 | 33 | 299 | 2.23e-26 | 106 |
| MS.gene24120.t1 | AT2G19060 | 32.800 | 250 | 130 | 9 | 30 | 251 | 32 | 271 | 8.06e-26 | 104 |
| MS.gene24120.t1 | AT1G71691 | 30.627 | 271 | 158 | 8 | 19 | 264 | 46 | 311 | 1.45e-25 | 103 |
| MS.gene24120.t1 | AT5G15720 | 32.463 | 268 | 145 | 10 | 28 | 264 | 30 | 292 | 2.52e-25 | 102 |
| MS.gene24120.t1 | AT1G71691 | 30.627 | 271 | 158 | 8 | 19 | 264 | 46 | 311 | 3.44e-25 | 103 |
| MS.gene24120.t1 | AT5G55050 | 34.457 | 267 | 137 | 8 | 31 | 264 | 42 | 303 | 5.62e-25 | 102 |
| MS.gene24120.t1 | AT5G15720 | 32.103 | 271 | 148 | 10 | 25 | 264 | 27 | 292 | 7.34e-25 | 102 |
| MS.gene24120.t1 | AT4G16230 | 37.500 | 192 | 112 | 6 | 28 | 215 | 30 | 217 | 5.20e-24 | 97.8 |
| MS.gene24120.t1 | AT4G10950 | 29.167 | 264 | 153 | 8 | 28 | 264 | 71 | 327 | 5.29e-24 | 100 |
| MS.gene24120.t1 | AT1G74460 | 28.077 | 260 | 161 | 6 | 30 | 264 | 25 | 283 | 1.43e-23 | 98.6 |
| MS.gene24120.t1 | AT1G53940 | 29.520 | 271 | 159 | 9 | 26 | 269 | 37 | 302 | 1.05e-22 | 95.1 |
| MS.gene24120.t1 | AT5G37690 | 28.137 | 263 | 146 | 7 | 31 | 264 | 30 | 278 | 1.08e-22 | 95.9 |
| MS.gene24120.t1 | AT1G53920 | 35.593 | 177 | 107 | 6 | 28 | 203 | 48 | 218 | 2.63e-22 | 95.5 |
| MS.gene24120.t1 | AT1G71250 | 30.682 | 264 | 153 | 6 | 28 | 264 | 41 | 301 | 6.20e-22 | 94.4 |
| MS.gene24120.t1 | AT1G33811 | 27.778 | 270 | 158 | 9 | 28 | 264 | 34 | 299 | 7.56e-22 | 94.0 |
| MS.gene24120.t1 | AT1G53940 | 28.947 | 266 | 157 | 9 | 26 | 264 | 37 | 297 | 1.08e-19 | 87.8 |
| MS.gene24120.t1 | AT4G30140 | 32.661 | 248 | 130 | 12 | 30 | 251 | 35 | 271 | 1.34e-17 | 81.6 |
| MS.gene24120.t1 | AT5G40990 | 29.630 | 270 | 150 | 11 | 26 | 264 | 35 | 295 | 1.64e-17 | 81.6 |
| MS.gene24120.t1 | AT3G05180 | 25.279 | 269 | 164 | 7 | 28 | 264 | 36 | 299 | 9.06e-17 | 79.7 |
| MS.gene24120.t1 | AT5G03610 | 28.063 | 253 | 145 | 7 | 29 | 259 | 44 | 281 | 9.50e-17 | 79.3 |
| MS.gene24120.t1 | AT2G27360 | 29.181 | 281 | 146 | 8 | 27 | 264 | 32 | 302 | 1.22e-16 | 79.3 |
| MS.gene24120.t1 | AT1G28590 | 30.068 | 296 | 147 | 13 | 19 | 267 | 25 | 307 | 3.10e-16 | 78.2 |
| MS.gene24120.t1 | AT2G31550 | 28.846 | 156 | 85 | 2 | 135 | 264 | 1 | 156 | 1.11e-15 | 74.3 |
| MS.gene24120.t1 | AT1G71120 | 39.474 | 152 | 81 | 5 | 28 | 176 | 31 | 174 | 1.57e-15 | 75.9 |
| MS.gene24120.t1 | AT1G28580 | 28.269 | 283 | 151 | 10 | 27 | 267 | 36 | 308 | 1.15e-14 | 73.6 |
| MS.gene24120.t1 | AT1G53990 | 36.747 | 166 | 83 | 8 | 11 | 169 | 17 | 167 | 2.72e-14 | 72.4 |
| MS.gene24120.t1 | AT1G28610 | 27.857 | 280 | 149 | 11 | 27 | 264 | 30 | 298 | 3.63e-14 | 72.0 |
| MS.gene24120.t1 | AT3G14225 | 36.538 | 156 | 85 | 7 | 26 | 175 | 35 | 182 | 5.70e-14 | 71.6 |
| MS.gene24120.t1 | AT1G28570 | 29.329 | 283 | 142 | 11 | 27 | 264 | 33 | 302 | 5.95e-14 | 71.6 |
| MS.gene24120.t1 | AT3G14225 | 36.478 | 159 | 85 | 7 | 26 | 175 | 35 | 186 | 7.20e-14 | 71.2 |
| MS.gene24120.t1 | AT1G31550 | 27.719 | 285 | 149 | 11 | 27 | 267 | 35 | 306 | 2.63e-13 | 69.7 |
| MS.gene24120.t1 | AT1G28600 | 28.322 | 286 | 140 | 12 | 27 | 264 | 30 | 298 | 4.55e-13 | 68.9 |
| MS.gene24120.t1 | AT4G16220 | 46.809 | 94 | 45 | 3 | 28 | 121 | 30 | 118 | 5.45e-13 | 67.4 |
| MS.gene24120.t1 | AT1G31550 | 34.756 | 164 | 86 | 7 | 27 | 178 | 35 | 189 | 1.71e-12 | 67.4 |
| MS.gene24120.t1 | AT3G09930 | 26.087 | 253 | 151 | 7 | 29 | 259 | 40 | 278 | 1.82e-12 | 67.0 |
| MS.gene24120.t1 | AT3G09930 | 26.087 | 253 | 151 | 7 | 29 | 259 | 40 | 278 | 1.82e-12 | 67.0 |
| MS.gene24120.t1 | AT1G28640 | 26.899 | 316 | 166 | 15 | 1 | 264 | 1 | 303 | 6.52e-12 | 65.5 |
| MS.gene24120.t1 | AT1G28670 | 27.899 | 276 | 156 | 10 | 27 | 264 | 34 | 304 | 7.00e-12 | 65.5 |
| MS.gene24120.t1 | AT1G28610 | 31.373 | 204 | 102 | 9 | 27 | 203 | 30 | 222 | 2.17e-11 | 62.8 |
| MS.gene24120.t1 | AT5G14450 | 24.275 | 276 | 162 | 8 | 28 | 264 | 41 | 308 | 2.84e-11 | 63.5 |
| MS.gene24120.t1 | AT1G28600 | 34.940 | 166 | 77 | 9 | 27 | 175 | 30 | 181 | 9.02e-11 | 60.8 |
Find 56 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCTTCTAATTTCTTAA+AGG | 0.156477 | 1.2:-463710 | MS.gene24120:intron |
| TCCTGATTATGCTGATCTTA+TGG | 0.251081 | 1.2:-463737 | MS.gene24120:CDS |
| TCCTGCTGTTTGGATAATTC+TGG | 0.287953 | 1.2:+463151 | None:intergenic |
| AAATCACTGGGCTGGAGATT+TGG | 0.299729 | 1.2:+464138 | None:intergenic |
| GTTCCAGCAGTGTTGGTGTT+TGG | 0.319690 | 1.2:-465886 | MS.gene24120:intron |
| TGCTTTGCATCTGGTGGTGC+TGG | 0.320744 | 1.2:-464102 | MS.gene24120:CDS |
| AGAATTTCTACCAGCATACT+TGG | 0.356901 | 1.2:-464163 | MS.gene24120:CDS |
| TTGTGGTCAGTTGAAGAATT+AGG | 0.371518 | 1.2:-464192 | MS.gene24120:intron |
| ATTGTAAACTCTAATAAATA+TGG | 0.372700 | 1.2:-463090 | MS.gene24120:CDS |
| CCTTTGAAATCTTTCCCATA+AGG | 0.400518 | 1.2:+465796 | None:intergenic |
| ACTGGTGTGTGCTTTGCATC+TGG | 0.407233 | 1.2:-464111 | MS.gene24120:CDS |
| CAGTCAGCAATATCATTATC+TGG | 0.410346 | 1.2:-463925 | MS.gene24120:CDS |
| TACAATAGCAAATTGTCAAA+GGG | 0.412333 | 1.2:-463189 | MS.gene24120:CDS |
| ACCATAAGATCAGCATAATC+AGG | 0.417873 | 1.2:+463736 | None:intergenic |
| GGAGATTCTATCGTGGATAC+AGG | 0.422024 | 1.2:-465865 | MS.gene24120:CDS |
| GGAAAATTAAGAGGACTTGT+TGG | 0.429168 | 1.2:-463874 | MS.gene24120:CDS |
| CATAATCAGGAAAATCATAC+TGG | 0.431311 | 1.2:+463749 | None:intergenic |
| ATGTAAACAATCCTGCTGTT+TGG | 0.434657 | 1.2:+463141 | None:intergenic |
| CCATTTCAGAGAACAGCTGC+TGG | 0.443466 | 1.2:-463261 | MS.gene24120:intron |
| TTCAAAGGAGGGATTCCAAC+AGG | 0.451153 | 1.2:-465781 | MS.gene24120:CDS |
| CAGCCCAGTGATTTACCTAC+TGG | 0.453091 | 1.2:-464129 | MS.gene24120:CDS |
| ATTCTTTGAACAAATCTAGT+TGG | 0.462739 | 1.2:+463902 | None:intergenic |
| ACCAGAATTATCCAAACAGC+AGG | 0.467487 | 1.2:-463152 | MS.gene24120:CDS |
| AAAGTTCCCTCAGACTTCAT+AGG | 0.491281 | 1.2:-465742 | MS.gene24120:intron |
| ACAAACTTTATGATCAGAAA+AGG | 0.494534 | 1.2:-466929 | MS.gene24120:intron |
| TTGAAATCTTTCCCATAAGG+TGG | 0.509489 | 1.2:+465799 | None:intergenic |
| CCATTGCTAAATCTTCCTGT+TGG | 0.510054 | 1.2:+465766 | None:intergenic |
| CTTCTAATCATAAAGATGGT+TGG | 0.516729 | 1.2:+466962 | None:intergenic |
| TCCTTTGACATCTCAAACTG+CGG | 0.523946 | 1.2:-464073 | MS.gene24120:intron |
| ATACAATAGCAAATTGTCAA+AGG | 0.525696 | 1.2:-463190 | MS.gene24120:CDS |
| TGTTTCAGTTCCAGCAGTGT+TGG | 0.525916 | 1.2:-465893 | MS.gene24120:intron |
| AGACAGAACAAACTTCATCT+TGG | 0.527036 | 1.2:-463848 | MS.gene24120:CDS |
| TAATCTTCTAATCATAAAGA+TGG | 0.533757 | 1.2:+466958 | None:intergenic |
| GAATACATAGGAAAATTAAG+AGG | 0.545890 | 1.2:-463883 | MS.gene24120:CDS |
| GCGAGACAAGAAATATGTGT+TGG | 0.549615 | 1.2:+463783 | None:intergenic |
| CAGTAGGTAAATCACTGGGC+TGG | 0.554672 | 1.2:+464130 | None:intergenic |
| CACACCAGTAGGTAAATCAC+TGG | 0.556309 | 1.2:+464125 | None:intergenic |
| TATGGGAAAGATTTCAAAGG+AGG | 0.566990 | 1.2:-465793 | MS.gene24120:CDS |
| AGATTTGGATCCAAGTATGC+TGG | 0.578680 | 1.2:+464153 | None:intergenic |
| ATGGGAAAGATTTCAAAGGA+GGG | 0.579064 | 1.2:-465792 | MS.gene24120:CDS |
| TGTAGTACCTATGAAGTCTG+AGG | 0.593842 | 1.2:+465735 | None:intergenic |
| CAGCTGCTGGAGGAATAGAA+AGG | 0.604803 | 1.2:-463248 | MS.gene24120:CDS |
| GGTGTGTGCTTTGCATCTGG+TGG | 0.610085 | 1.2:-464108 | MS.gene24120:CDS |
| CCTTATGGGAAAGATTTCAA+AGG | 0.615497 | 1.2:-465796 | MS.gene24120:CDS |
| TTACAATGATGTCAAGCAGA+GGG | 0.617872 | 1.2:+463106 | None:intergenic |
| ACAATAGCAAATTGTCAAAG+GGG | 0.619212 | 1.2:-463188 | MS.gene24120:CDS |
| GATGCAAAGCACACACCAGT+AGG | 0.632880 | 1.2:+464114 | None:intergenic |
| GATTTGTTCAAAGAATACAT+AGG | 0.632933 | 1.2:-463895 | MS.gene24120:CDS |
| CCAACAGGAAGATTTAGCAA+TGG | 0.634651 | 1.2:-465766 | MS.gene24120:CDS |
| GTAGTACCTATGAAGTCTGA+GGG | 0.653162 | 1.2:+465736 | None:intergenic |
| TTTCAGAGAACAGCTGCTGG+AGG | 0.657240 | 1.2:-463258 | MS.gene24120:intron |
| TTTACAATGATGTCAAGCAG+AGG | 0.658645 | 1.2:+463105 | None:intergenic |
| ACCGCAGTTTGAGATGTCAA+AGG | 0.661904 | 1.2:+464072 | None:intergenic |
| CATTACTGCCCAATACCACA+AGG | 0.663942 | 1.2:+463812 | None:intergenic |
| GGTGTTTGGAGATTCTATCG+TGG | 0.689331 | 1.2:-465872 | MS.gene24120:CDS |
| ACACCAGTAGGTAAATCACT+GGG | 0.703062 | 1.2:+464126 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAATTAACAAAAATATTA+GGG | - | chr1.2:463685-463704 | MS.gene24120:intron | 10.0% |
| !!! | TTCAATACATATATTTTAAT+CGG | + | chr1.2:466539-466558 | None:intergenic | 10.0% |
| !! | AAAATGCAATAAATAAAAAC+TGG | - | chr1.2:464616-464635 | MS.gene24120:intron | 15.0% |
| !! | AAATAAAAAAATACTTGGTA+AGG | + | chr1.2:466675-466694 | None:intergenic | 15.0% |
| !! | AACAATGCATAATATATATA+AGG | - | chr1.2:464880-464899 | MS.gene24120:intron | 15.0% |
| !! | ATTGTAAACTCTAATAAATA+TGG | - | chr1.2:466961-466980 | MS.gene24120:CDS | 15.0% |
| !! | CAAGTAATATTATTATGAAA+TGG | + | chr1.2:464098-464117 | None:intergenic | 15.0% |
| !! | CCTTAATTAACAAAAATATT+AGG | - | chr1.2:463684-463703 | MS.gene24120:intron | 15.0% |
| !! | GCTTAATTAACAAAAAAAAA+GGG | - | chr1.2:463721-463740 | MS.gene24120:CDS | 15.0% |
| !! | TGCTTAATTAACAAAAAAAA+AGG | - | chr1.2:463720-463739 | MS.gene24120:CDS | 15.0% |
| !! | TGTAAAATAAATACATACAT+GGG | - | chr1.2:465351-465370 | MS.gene24120:intron | 15.0% |
| !! | TTGTAAAATAAATACATACA+TGG | - | chr1.2:465350-465369 | MS.gene24120:intron | 15.0% |
| !!! | ATAAGATTTTATTAAAACAC+AGG | - | chr1.2:463190-463209 | MS.gene24120:CDS | 15.0% |
| !!! | ATTTTTTTTCGAACTTTTAA+AGG | - | chr1.2:464446-464465 | MS.gene24120:intron | 15.0% |
| !!! | CCTAATATTTTTGTTAATTA+AGG | + | chr1.2:463687-463706 | None:intergenic | 15.0% |
| !!! | TAACTTCTAAAAAGATATTA+GGG | + | chr1.2:466020-466039 | None:intergenic | 15.0% |
| !!! | TAGTTTGATTATGTTTTATA+TGG | + | chr1.2:464990-465009 | None:intergenic | 15.0% |
| !!! | TCACTTTTATAGTTATAAAA+TGG | - | chr1.2:466638-466657 | MS.gene24120:intron | 15.0% |
| !!! | TTTTTTTTCGAACTTTTAAA+GGG | - | chr1.2:464447-464466 | MS.gene24120:intron | 15.0% |
| !! | AAAATATTAGGGAACTAAAT+TGG | - | chr1.2:463696-463715 | MS.gene24120:intron | 20.0% |
| !! | AATAAATGAGCTAAACAAAA+TGG | - | chr1.2:463894-463913 | MS.gene24120:CDS | 20.0% |
| !! | AATATAATATGAAACCAACA+TGG | + | chr1.2:463655-463674 | None:intergenic | 20.0% |
| !! | ATATATATTTAGTGTGTAAC+TGG | + | chr1.2:463380-463399 | None:intergenic | 20.0% |
| !! | ATTTATTAACTAGTGCTTTA+AGG | + | chr1.2:465770-465789 | None:intergenic | 20.0% |
| !! | TAAAACATAATCAAACTACT+AGG | - | chr1.2:464992-465011 | MS.gene24120:intron | 20.0% |
| !! | TAATCTTCTAATCATAAAGA+TGG | + | chr1.2:463096-463115 | None:intergenic | 20.0% |
| !! | TTATAAATTAAATGTGACAC+TGG | - | chr1.2:463787-463806 | MS.gene24120:CDS | 20.0% |
| !! | TTGTATGATGATAATTTCTA+TGG | + | chr1.2:465417-465436 | None:intergenic | 20.0% |
| !! | TTTATTAACTAGTGCTTTAA+GGG | + | chr1.2:465769-465788 | None:intergenic | 20.0% |
| !!! | AACTTCTAAAAAGATATTAG+GGG | + | chr1.2:466019-466038 | None:intergenic | 20.0% |
| !!! | CAAGTTAAGTAAGTTTTTAA+TGG | + | chr1.2:466043-466062 | None:intergenic | 20.0% |
| !!! | GTAACTTCTAAAAAGATATT+AGG | + | chr1.2:466021-466040 | None:intergenic | 20.0% |
| !!! | GTATATATAAAAGCATTTGT+TGG | + | chr1.2:463582-463601 | None:intergenic | 20.0% |
| !!! | TATGTTTTATATGGAATATC+AGG | + | chr1.2:464981-465000 | None:intergenic | 20.0% |
| ! | AAAGAAAGGGAATTCATTAA+AGG | + | chr1.2:464069-464088 | None:intergenic | 25.0% |
| ! | ACAAACTTTATGATCAGAAA+AGG | - | chr1.2:463122-463141 | MS.gene24120:CDS | 25.0% |
| ! | ACAATCAAGATTAAGTCATT+AGG | - | chr1.2:465026-465045 | MS.gene24120:intron | 25.0% |
| ! | ATACAATAGCAAATTGTCAA+AGG | - | chr1.2:466861-466880 | MS.gene24120:intron | 25.0% |
| ! | ATCACAAACAAGTATATACA+CGG | + | chr1.2:465727-465746 | None:intergenic | 25.0% |
| ! | ATGATACAAGTAAGAATAGA+TGG | - | chr1.2:465662-465681 | MS.gene24120:intron | 25.0% |
| ! | ATGCTTCTCATATTTAGAAA+AGG | - | chr1.2:463987-464006 | MS.gene24120:intron | 25.0% |
| ! | ATTCTTTGAACAAATCTAGT+TGG | + | chr1.2:466152-466171 | None:intergenic | 25.0% |
| ! | CAACACACATTCATTTAAAT+TGG | - | chr1.2:466440-466459 | MS.gene24120:intron | 25.0% |
| ! | CTAAACATAGGTATTCAAAA+TGG | - | chr1.2:464486-464505 | MS.gene24120:intron | 25.0% |
| ! | GAAATGGAGAAAAAAAGAAA+GGG | + | chr1.2:464082-464101 | None:intergenic | 25.0% |
| ! | GAATACATAGGAAAATTAAG+AGG | - | chr1.2:466168-466187 | MS.gene24120:intron | 25.0% |
| ! | GATAATTTCTATGGAATCTT+GGG | + | chr1.2:465408-465427 | None:intergenic | 25.0% |
| ! | GCATATGCTAGTATATATTA+TGG | - | chr1.2:464041-464060 | MS.gene24120:intron | 25.0% |
| ! | GTAAATTAGGGTTTAGTTAT+CGG | + | chr1.2:463748-463767 | None:intergenic | 25.0% |
| ! | TAACAAGTTGCAAATATCTT+GGG | - | chr1.2:466377-466396 | MS.gene24120:intron | 25.0% |
| ! | TAATCGGTTGAAATTCAAAT+TGG | + | chr1.2:466523-466542 | None:intergenic | 25.0% |
| ! | TAATGACTTAATCTTGATTG+TGG | + | chr1.2:465027-465046 | None:intergenic | 25.0% |
| ! | TACAATAGCAAATTGTCAAA+GGG | - | chr1.2:466862-466881 | MS.gene24120:intron | 25.0% |
| ! | TAGTTTATTTATCCGTGATT+CGG | + | chr1.2:464563-464582 | None:intergenic | 25.0% |
| ! | TATGTTTAAACAATGTCCTT+AGG | - | chr1.2:464781-464800 | MS.gene24120:intron | 25.0% |
| ! | TGAAATGGAGAAAAAAAGAA+AGG | + | chr1.2:464083-464102 | None:intergenic | 25.0% |
| ! | TGATAATTTCTATGGAATCT+TGG | + | chr1.2:465409-465428 | None:intergenic | 25.0% |
| ! | TTAACAAGTTGCAAATATCT+TGG | - | chr1.2:466376-466395 | MS.gene24120:intron | 25.0% |
| ! | TTAGTGAGTGTAAATACAAA+AGG | + | chr1.2:465144-465163 | None:intergenic | 25.0% |
| ! | TTCAGCTTCTAATTTCTTAA+AGG | - | chr1.2:466341-466360 | MS.gene24120:intron | 25.0% |
| ! | TTTGAGTATATATTGTCATC+AGG | + | chr1.2:464832-464851 | None:intergenic | 25.0% |
| !! | ATGGTAATTACAACTTTTGT+TGG | - | chr1.2:466980-466999 | MS.gene24120:CDS | 25.0% |
| !! | ATGTAGTACATTTTTGAACA+GGG | - | chr1.2:465523-465542 | MS.gene24120:intron | 25.0% |
| !! | ATGTTTAGAATACTCTAAGA+TGG | + | chr1.2:464474-464493 | None:intergenic | 25.0% |
| !! | CATAATTGAATCGGTTTAAT+CGG | - | chr1.2:464529-464548 | MS.gene24120:intron | 25.0% |
| !! | GATTTGTTCAAAGAATACAT+AGG | - | chr1.2:466156-466175 | MS.gene24120:intron | 25.0% |
| !! | TATGTAGTACATTTTTGAAC+AGG | - | chr1.2:465522-465541 | MS.gene24120:intron | 25.0% |
| !! | TCTTAGAGTATTCTAAACAT+AGG | - | chr1.2:464474-464493 | MS.gene24120:intron | 25.0% |
| !!! | ATAAAAGCATTTGTTGGTAT+AGG | + | chr1.2:463576-463595 | None:intergenic | 25.0% |
| !!! | TAAAAGCATTTGTTGGTATA+GGG | + | chr1.2:463575-463594 | None:intergenic | 25.0% |
| !!! | TAACCTACTTTTTTGTATTG+TGG | - | chr1.2:465842-465861 | MS.gene24120:CDS | 25.0% |
| !!! | TATTTTTAACAAGTGTCCTA+AGG | - | chr1.2:464668-464687 | MS.gene24120:intron | 25.0% |
| AAAACTGGTTGAATCAATTG+CGG | - | chr1.2:464631-464650 | MS.gene24120:intron | 30.0% | |
| AAATGTTAACAAGTGTCCTA+AGG | + | chr1.2:464800-464819 | None:intergenic | 30.0% | |
| AATAAATACATACATGGGAG+AGG | - | chr1.2:465356-465375 | MS.gene24120:intron | 30.0% | |
| ACAAGTATATACACGGATTT+AGG | + | chr1.2:465720-465739 | None:intergenic | 30.0% | |
| ACAATAGCAAATTGTCAAAG+GGG | - | chr1.2:466863-466882 | MS.gene24120:intron | 30.0% | |
| ATCAAGTGACTCTATAATCA+GGG | + | chr1.2:463479-463498 | None:intergenic | 30.0% | |
| ATGGAATCATTATGACATCT+AGG | - | chr1.2:464505-464524 | MS.gene24120:intron | 30.0% | |
| CAAGTATATACACGGATTTA+GGG | + | chr1.2:465719-465738 | None:intergenic | 30.0% | |
| CAATTGCGGTTATTTAGTTA+GGG | - | chr1.2:464645-464664 | MS.gene24120:intron | 30.0% | |
| CACATTCTTTATCTTGTATG+CGG | + | chr1.2:464940-464959 | None:intergenic | 30.0% | |
| CATAATCAGGAAAATCATAC+TGG | + | chr1.2:466305-466324 | None:intergenic | 30.0% | |
| CATCTAGGTCATAATTGAAT+CGG | - | chr1.2:464520-464539 | MS.gene24120:intron | 30.0% | |
| CTTCTAATCATAAAGATGGT+TGG | + | chr1.2:463092-463111 | None:intergenic | 30.0% | |
| CTTGTTGCATGTAAAACAAA+GGG | - | chr1.2:464114-464133 | MS.gene24120:CDS | 30.0% | |
| GATAAAGAATGTGGTTATCT+AGG | - | chr1.2:464947-464966 | MS.gene24120:intron | 30.0% | |
| GTGAATTCATGAGTCATTAA+TGG | - | chr1.2:463144-463163 | MS.gene24120:CDS | 30.0% | |
| TACTTACCAGTCGTAAATTA+GGG | + | chr1.2:463760-463779 | None:intergenic | 30.0% | |
| TAGAAACTAAAGTGAATCGA+CGG | + | chr1.2:465086-465105 | None:intergenic | 30.0% | |
| TATCAACAACATCTTAACTC+TGG | - | chr1.2:463498-463517 | MS.gene24120:intron | 30.0% | |
| TATCAAGTGACTCTATAATC+AGG | + | chr1.2:463480-463499 | None:intergenic | 30.0% | |
| TCAATTGCGGTTATTTAGTT+AGG | - | chr1.2:464644-464663 | MS.gene24120:intron | 30.0% | |
| TGAAAGGAAATATATGAGCT+AGG | - | chr1.2:466721-466740 | MS.gene24120:intron | 30.0% | |
| TGACCACAATACAAAAAAGT+AGG | + | chr1.2:465848-465867 | None:intergenic | 30.0% | |
| TGAGTGTAAATACAAAAGGA+CGG | + | chr1.2:465140-465159 | None:intergenic | 30.0% | |
| TGATATCCTCTGAATCATAT+AGG | - | chr1.2:466476-466495 | MS.gene24120:intron | 30.0% | |
| TGCAAAACTATAATGTCTTC+AGG | + | chr1.2:463863-463882 | None:intergenic | 30.0% | |
| TTCCTTTCATTTGTATTGAG+AGG | + | chr1.2:466710-466729 | None:intergenic | 30.0% | |
| ! | AAAAGTAGCAACTTTTGCAT+TGG | + | chr1.2:464760-464779 | None:intergenic | 30.0% |
| ! | AAGACATATTTTCCTTCTGT+GGG | + | chr1.2:464709-464728 | None:intergenic | 30.0% |
| ! | ACTTGTTGCATGTAAAACAA+AGG | - | chr1.2:464113-464132 | MS.gene24120:CDS | 30.0% |
| ! | ATAGGGGTCAACATTTTAAA+TGG | + | chr1.2:463558-463577 | None:intergenic | 30.0% |
| ! | TAGGGGTCAACATTTTAAAT+GGG | + | chr1.2:463557-463576 | None:intergenic | 30.0% |
| ! | TTCCCTTTTGTCTTATACAT+CGG | + | chr1.2:464404-464423 | None:intergenic | 30.0% |
| !! | AAAAGCATTTGTTGGTATAG+GGG | + | chr1.2:463574-463593 | None:intergenic | 30.0% |
| !! | TGTCGATTTAGCATTTGTTA+TGG | - | chr1.2:463922-463941 | MS.gene24120:CDS | 30.0% |
| AAATATATGAGCTAGGTGCA+AGG | - | chr1.2:466728-466747 | MS.gene24120:intron | 35.0% | |
| AATATGAAACCAACATGGTG+TGG | + | chr1.2:463650-463669 | None:intergenic | 35.0% | |
| ACCATAAGATCAGCATAATC+AGG | + | chr1.2:466318-466337 | None:intergenic | 35.0% | |
| ACTAAACCCTAATTTACGAC+TGG | - | chr1.2:463751-463770 | MS.gene24120:CDS | 35.0% | |
| AGAATTTCTACCAGCATACT+TGG | - | chr1.2:465888-465907 | MS.gene24120:intron | 35.0% | |
| AGACAGAACAAACTTCATCT+TGG | - | chr1.2:466203-466222 | MS.gene24120:intron | 35.0% | |
| ATGGAATCTTGGGTTTGAAT+TGG | + | chr1.2:465398-465417 | None:intergenic | 35.0% | |
| ATGGGAAAGATTTCAAAGGA+GGG | - | chr1.2:464259-464278 | MS.gene24120:intron | 35.0% | |
| ATGTAAACAATCCTGCTGTT+TGG | + | chr1.2:466913-466932 | None:intergenic | 35.0% | |
| CACCTCTCAATACAAATGAA+AGG | - | chr1.2:466705-466724 | MS.gene24120:intron | 35.0% | |
| CAGTCAGCAATATCATTATC+TGG | - | chr1.2:466126-466145 | MS.gene24120:intron | 35.0% | |
| CCTTATGGGAAAGATTTCAA+AGG | - | chr1.2:464255-464274 | MS.gene24120:intron | 35.0% | |
| CGCATACAAGATAAAGAATG+TGG | - | chr1.2:464938-464957 | MS.gene24120:intron | 35.0% | |
| CTACTTACCAGTCGTAAATT+AGG | + | chr1.2:463761-463780 | None:intergenic | 35.0% | |
| CTTTCATTTGTATTGAGAGG+TGG | + | chr1.2:466707-466726 | None:intergenic | 35.0% | |
| GACCGATGTATAAGACAAAA+GGG | - | chr1.2:464399-464418 | MS.gene24120:intron | 35.0% | |
| GAGTGTAAATACAAAAGGAC+GGG | + | chr1.2:465139-465158 | None:intergenic | 35.0% | |
| GGAAAATTAAGAGGACTTGT+TGG | - | chr1.2:466177-466196 | MS.gene24120:intron | 35.0% | |
| GTTCCTTAAACAATGTCCTT+AGG | + | chr1.2:464687-464706 | None:intergenic | 35.0% | |
| TATATACACGGATTTAGGGA+TGG | + | chr1.2:465715-465734 | None:intergenic | 35.0% | |
| TATGGGAAAGATTTCAAAGG+AGG | - | chr1.2:464258-464277 | MS.gene24120:intron | 35.0% | |
| TATGGTTGTTGAGGTTTGAA+CGG | + | chr1.2:464910-464929 | None:intergenic | 35.0% | |
| TATTCAATGCACCACCAATT+GGG | - | chr1.2:466761-466780 | MS.gene24120:intron | 35.0% | |
| TCAAGTCTCAACACAAAAAC+TGG | - | chr1.2:466611-466630 | MS.gene24120:intron | 35.0% | |
| TCCTGATTATGCTGATCTTA+TGG | - | chr1.2:466314-466333 | MS.gene24120:intron | 35.0% | |
| TGAAATACTACTTGTCTAGC+AGG | + | chr1.2:464361-464380 | None:intergenic | 35.0% | |
| TGACCGATGTATAAGACAAA+AGG | - | chr1.2:464398-464417 | MS.gene24120:intron | 35.0% | |
| TGTCCTAAGGACATTGTTTA+AGG | - | chr1.2:464681-464700 | MS.gene24120:intron | 35.0% | |
| TTACAATGATGTCAAGCAGA+GGG | + | chr1.2:466948-466967 | None:intergenic | 35.0% | |
| TTGAAATCTTTCCCATAAGG+TGG | + | chr1.2:464255-464274 | None:intergenic | 35.0% | |
| TTGAACAGGGTAATCAGTAA+AGG | - | chr1.2:465536-465555 | MS.gene24120:intron | 35.0% | |
| TTGGTCGCACTAAATTTATG+TGG | + | chr1.2:466504-466523 | None:intergenic | 35.0% | |
| TTGTGGTCAGTTGAAGAATT+AGG | - | chr1.2:465859-465878 | MS.gene24120:CDS | 35.0% | |
| TTTACAATGATGTCAAGCAG+AGG | + | chr1.2:466949-466968 | None:intergenic | 35.0% | |
| ! | AGTCTTTTCCTTGTGGTATT+GGG | - | chr1.2:466231-466250 | MS.gene24120:intron | 35.0% |
| ! | CAAGACATATTTTCCTTCTG+TGG | + | chr1.2:464710-464729 | None:intergenic | 35.0% |
| ! | GTTGCAATTTTCCACCTTAT+GGG | - | chr1.2:464241-464260 | MS.gene24120:intron | 35.0% |
| ! | TAGTCTTTTCCTTGTGGTAT+TGG | - | chr1.2:466230-466249 | MS.gene24120:intron | 35.0% |
| !! | CCTTTGAAATCTTTCCCATA+AGG | + | chr1.2:464258-464277 | None:intergenic | 35.0% |
| !!! | CTTGTATGCGGTCTTTTTTA+TGG | + | chr1.2:464928-464947 | None:intergenic | 35.0% |
| !!! | GGTCTTTTTTATGGTTGTTG+AGG | + | chr1.2:464919-464938 | None:intergenic | 35.0% |
| AAAGTTCCCTCAGACTTCAT+AGG | - | chr1.2:464309-464328 | MS.gene24120:intron | 40.0% | |
| ACACCAGTAGGTAAATCACT+GGG | + | chr1.2:465928-465947 | None:intergenic | 40.0% | |
| ACCAGAATTATCCAAACAGC+AGG | - | chr1.2:466899-466918 | MS.gene24120:intron | 40.0% | |
| ACTGCTGGAACTGAAACATT+TGG | + | chr1.2:464156-464175 | None:intergenic | 40.0% | |
| AGATTTGGATCCAAGTATGC+TGG | + | chr1.2:465901-465920 | None:intergenic | 40.0% | |
| CCAACAGGAAGATTTAGCAA+TGG | - | chr1.2:464285-464304 | MS.gene24120:intron | 40.0% | |
| CCATTGCTAAATCTTCCTGT+TGG | + | chr1.2:464288-464307 | None:intergenic | 40.0% | |
| GAGAAAATAGTGACTTGACG+TGG | - | chr1.2:463827-463846 | MS.gene24120:CDS | 40.0% | |
| GCGAGACAAGAAATATGTGT+TGG | + | chr1.2:466271-466290 | None:intergenic | 40.0% | |
| GTAGTACCTATGAAGTCTGA+GGG | + | chr1.2:464318-464337 | None:intergenic | 40.0% | |
| GTATTCAATGCACCACCAAT+TGG | - | chr1.2:466760-466779 | MS.gene24120:intron | 40.0% | |
| GTGGAACCTATATGATTCAG+AGG | + | chr1.2:466485-466504 | None:intergenic | 40.0% | |
| TCCTTTGACATCTCAAACTG+CGG | - | chr1.2:465978-465997 | MS.gene24120:intron | 40.0% | |
| TGAAATGGCAAACACCCAAT+TGG | + | chr1.2:466778-466797 | None:intergenic | 40.0% | |
| TGTAGTACCTATGAAGTCTG+AGG | + | chr1.2:464319-464338 | None:intergenic | 40.0% | |
| TTGTTTAAGGAACCCACAGA+AGG | - | chr1.2:464694-464713 | MS.gene24120:intron | 40.0% | |
| ! | CAAGTCACTATTTTCTCGCA+AGG | + | chr1.2:463824-463843 | None:intergenic | 40.0% |
| ! | CAGTCTAAGTTGAATCTCCA+AGG | - | chr1.2:465202-465221 | MS.gene24120:intron | 40.0% |
| ! | CGTTGCAATTTTCCACCTTA+TGG | - | chr1.2:464240-464259 | MS.gene24120:intron | 40.0% |
| ! | CTGAAACATTTGGTGGAAGT+TGG | + | chr1.2:464146-464165 | None:intergenic | 40.0% |
| ! | GGCAAATAGTCTTTTCCTTG+TGG | - | chr1.2:466224-466243 | MS.gene24120:intron | 40.0% |
| ! | TCCTGCTGTTTGGATAATTC+TGG | + | chr1.2:466903-466922 | None:intergenic | 40.0% |
| AATATTGCCACCTCACCTCA+AGG | - | chr1.2:465107-465126 | MS.gene24120:intron | 45.0% | |
| AATGGCAAACACCCAATTGG+TGG | + | chr1.2:466775-466794 | None:intergenic | 45.0% | |
| CACACCAGTAGGTAAATCAC+TGG | + | chr1.2:465929-465948 | None:intergenic | 45.0% | |
| CATTACTGCCCAATACCACA+AGG | + | chr1.2:466242-466261 | None:intergenic | 45.0% | |
| CGTGTGGTCAAAAAGAGTCA+CGG | + | chr1.2:463277-463296 | None:intergenic | 45.0% | |
| GAAGTTGAAGACGCTGAACA+AGG | - | chr1.2:463333-463352 | MS.gene24120:intron | 45.0% | |
| GCAATCACAATATAGCGCCT+TGG | + | chr1.2:465222-465241 | None:intergenic | 45.0% | |
| GCTGGAACTGAAACATTTGG+TGG | + | chr1.2:464153-464172 | None:intergenic | 45.0% | |
| GGAGATTCTATCGTGGATAC+AGG | - | chr1.2:464186-464205 | MS.gene24120:intron | 45.0% | |
| GGTGTTTGGAGATTCTATCG+TGG | - | chr1.2:464179-464198 | MS.gene24120:CDS | 45.0% | |
| TATATGAGCTAGGTGCAAGG+AGG | - | chr1.2:466731-466750 | MS.gene24120:intron | 45.0% | |
| TCGGTCTTTCAACCGAATCA+CGG | - | chr1.2:464548-464567 | MS.gene24120:intron | 45.0% | |
| TGTTTCAGTTCCAGCAGTGT+TGG | - | chr1.2:464158-464177 | MS.gene24120:CDS | 45.0% | |
| TTCAAAGGAGGGATTCCAAC+AGG | - | chr1.2:464270-464289 | MS.gene24120:intron | 45.0% | |
| ! | AAATCACTGGGCTGGAGATT+TGG | + | chr1.2:465916-465935 | None:intergenic | 45.0% |
| ! | ACCGCAGTTTGAGATGTCAA+AGG | + | chr1.2:465982-466001 | None:intergenic | 45.0% |
| ! | CTCTTTTTGACCACACGCAA+CGG | - | chr1.2:463280-463299 | MS.gene24120:intron | 45.0% |
| ! | TTTTCTCGCAAGGTCTAGCA+TGG | + | chr1.2:463814-463833 | None:intergenic | 45.0% |
| !! | AAAAAAAATAAAAAAATACT+TGG | + | chr1.2:466680-466699 | None:intergenic | 5.0% |
| !!! | AAGTATTTTTTTATTTTTTT+TGG | - | chr1.2:466679-466698 | MS.gene24120:intron | 5.0% |
| !!! | AATAATTTTTTTAAGAAAAA+AGG | + | chr1.2:463430-463449 | None:intergenic | 5.0% |
| AAAAAGAGTCACGGTGCAGC+AGG | + | chr1.2:463268-463287 | None:intergenic | 50.0% | |
| ACTGGTGTGTGCTTTGCATC+TGG | - | chr1.2:465940-465959 | MS.gene24120:intron | 50.0% | |
| AGGGATGGCAATGAGGATGA+TGG | + | chr1.2:465700-465719 | None:intergenic | 50.0% | |
| AGTAGCCCTGAGTGTCCATA+AGG | + | chr1.2:465251-465270 | None:intergenic | 50.0% | |
| CAGCCCAGTGATTTACCTAC+TGG | - | chr1.2:465922-465941 | MS.gene24120:intron | 50.0% | |
| CAGCTGCTGGAGGAATAGAA+AGG | - | chr1.2:466803-466822 | MS.gene24120:intron | 50.0% | |
| CAGTAGGTAAATCACTGGGC+TGG | + | chr1.2:465924-465943 | None:intergenic | 50.0% | |
| CATGGTGTGGCATGACGTAA+TGG | + | chr1.2:463637-463656 | None:intergenic | 50.0% | |
| CCATTTCAGAGAACAGCTGC+TGG | - | chr1.2:466790-466809 | MS.gene24120:intron | 50.0% | |
| CGGATTTAGGGATGGCAATG+AGG | + | chr1.2:465707-465726 | None:intergenic | 50.0% | |
| GATGCAAAGCACACACCAGT+AGG | + | chr1.2:465940-465959 | None:intergenic | 50.0% | |
| GGGATGGCAATGAGGATGAT+GGG | + | chr1.2:465699-465718 | None:intergenic | 50.0% | |
| GGTGGCTAGAGTGGAGAATA+TGG | - | chr1.2:463301-463320 | MS.gene24120:intron | 50.0% | |
| TACGTCATGCCACACCATGT+TGG | - | chr1.2:463638-463657 | MS.gene24120:intron | 50.0% | |
| TCGTGCCTTATGGACACTCA+GGG | - | chr1.2:465243-465262 | MS.gene24120:intron | 50.0% | |
| TCTCCAAACACCAACACTGC+TGG | + | chr1.2:464171-464190 | None:intergenic | 50.0% | |
| TGTGATTGCCTCGTGCCTTA+TGG | - | chr1.2:465233-465252 | MS.gene24120:intron | 50.0% | |
| TTTCAGAGAACAGCTGCTGG+AGG | - | chr1.2:466793-466812 | MS.gene24120:intron | 50.0% | |
| ! | CCAGCAGCTGTTCTCTGAAA+TGG | + | chr1.2:466793-466812 | None:intergenic | 50.0% |
| ! | TTTTTGACCACACGCAACGG+TGG | - | chr1.2:463283-463302 | MS.gene24120:intron | 50.0% |
| !! | ATGGCAATGAGGATGATGGG+TGG | + | chr1.2:465696-465715 | None:intergenic | 50.0% |
| !! | GTTCCAGCAGTGTTGGTGTT+TGG | - | chr1.2:464165-464184 | MS.gene24120:CDS | 50.0% |
| !! | TGGCAATGAGGATGATGGGT+GGG | + | chr1.2:465695-465714 | None:intergenic | 50.0% |
| CTCGTGCCTTATGGACACTC+AGG | - | chr1.2:465242-465261 | MS.gene24120:intron | 55.0% | |
| CTGAGTGTCCATAAGGCACG+AGG | + | chr1.2:465244-465263 | None:intergenic | 55.0% | |
| GAGCTAGGTGCAAGGAGGAT+TGG | - | chr1.2:466736-466755 | MS.gene24120:intron | 55.0% | |
| GGTGTGTGCTTTGCATCTGG+TGG | - | chr1.2:465943-465962 | MS.gene24120:intron | 55.0% | |
| TGCAGCAGGCAGGCATACAT+TGG | + | chr1.2:463254-463273 | None:intergenic | 55.0% | |
| ! | TGCTTTGCATCTGGTGGTGC+TGG | - | chr1.2:465949-465968 | MS.gene24120:intron | 55.0% |
| !! | AAGGACGGGCTTTAGCCTTG+AGG | + | chr1.2:465125-465144 | None:intergenic | 55.0% |
| !! | GCTTTAGCCTTGAGGTGAGG+TGG | + | chr1.2:465117-465136 | None:intergenic | 55.0% |
| !! | GGCAATGAGGATGATGGGTG+GGG | + | chr1.2:465694-465713 | None:intergenic | 55.0% |
| ACACGCAACGGTGGCTAGAG+TGG | - | chr1.2:463292-463311 | MS.gene24120:intron | 60.0% | |
| ACTCTAGCCACCGTTGCGTG+TGG | + | chr1.2:463293-463312 | None:intergenic | 60.0% | |
| !! | CGGGCTTTAGCCTTGAGGTG+AGG | + | chr1.2:465120-465139 | None:intergenic | 60.0% |
| AGAGTCACGGTGCAGCAGGC+AGG | + | chr1.2:463264-463283 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 463062 | 467011 | 463062 | ID=MS.gene24120 |
| chr1.2 | mRNA | 463062 | 467011 | 463062 | ID=MS.gene24120.t1;Parent=MS.gene24120 |
| chr1.2 | exon | 466930 | 467011 | 466930 | ID=MS.gene24120.t1.exon1;Parent=MS.gene24120.t1 |
| chr1.2 | CDS | 466930 | 467011 | 466930 | ID=cds.MS.gene24120.t1;Parent=MS.gene24120.t1 |
| chr1.2 | exon | 465743 | 465901 | 465743 | ID=MS.gene24120.t1.exon2;Parent=MS.gene24120.t1 |
| chr1.2 | CDS | 465743 | 465901 | 465743 | ID=cds.MS.gene24120.t1;Parent=MS.gene24120.t1 |
| chr1.2 | exon | 464074 | 464204 | 464074 | ID=MS.gene24120.t1.exon3;Parent=MS.gene24120.t1 |
| chr1.2 | CDS | 464074 | 464204 | 464074 | ID=cds.MS.gene24120.t1;Parent=MS.gene24120.t1 |
| chr1.2 | exon | 463711 | 463944 | 463711 | ID=MS.gene24120.t1.exon4;Parent=MS.gene24120.t1 |
| chr1.2 | CDS | 463711 | 463944 | 463711 | ID=cds.MS.gene24120.t1;Parent=MS.gene24120.t1 |
| chr1.2 | exon | 463062 | 463274 | 463062 | ID=MS.gene24120.t1.exon5;Parent=MS.gene24120.t1 |
| chr1.2 | CDS | 463062 | 463274 | 463062 | ID=cds.MS.gene24120.t1;Parent=MS.gene24120.t1 |
| Gene Sequence |
| Protein sequence |
