AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058019

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058019.t1 MTR_4g075040 98.737 396 4 1 1 395 1 396 0.0 796
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058019.t1 AT5G23120 88.415 328 38 0 68 395 99 426 0.0 611
MS.gene058019.t1 AT5G23120 88.415 328 38 0 68 395 76 403 0.0 609

Find 110 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATGTTCTGGATTCTTC+TGG 0.285677 4.2:+33682383 None:intergenic
CAATTGGAAGGCTGCTGTTC+AGG 0.287529 4.2:-33683520 MS.gene058019:CDS
TTCTGCAATGAACTGTCTTC+TGG 0.287847 4.2:+33685395 None:intergenic
GGGGACGAGGCAAACCCTTT+TGG 0.313718 4.2:-33684128 MS.gene058019:CDS
CAGCTCTCCATCCCATGTTC+TGG 0.319178 4.2:+33682373 None:intergenic
CAGTGTCGGCTACTCTTAAT+AGG 0.333230 4.2:-33683494 MS.gene058019:intron
CCGCTCAGTGCTGAACTTCC+TGG 0.336143 4.2:-33683932 MS.gene058019:CDS
TGACCATGGTTAGGATCTTC+AGG 0.343300 4.2:+33685249 None:intergenic
AGGTCTCGGAGAATGAATTA+TGG 0.357969 4.2:+33685458 None:intergenic
GACAAGAAGGGATTTGTATT+GGG 0.359279 4.2:-33680189 MS.gene058019:CDS
CCAATTGTATCCTCTGTTTG+AGG 0.361796 4.2:+33683536 None:intergenic
TCCTGATGCTGGAGAGAGTT+GGG 0.369099 4.2:-33683963 MS.gene058019:CDS
TGCTGAACTTCCTGGCGATA+TGG 0.370530 4.2:-33683924 MS.gene058019:intron
CAGGACGAGGCTTGGGCAGC+AGG 0.377236 4.2:-33681154 MS.gene058019:CDS
TGACAAGAAGGGATTTGTAT+TGG 0.379966 4.2:-33680190 MS.gene058019:CDS
CCATTCAGAAAGAGTTTCTT+CGG 0.385353 4.2:+33685329 None:intergenic
AGAAGGAACAAGCACGGATA+TGG 0.385547 4.2:+33685365 None:intergenic
GGAGAGCTGATGGTGGTCTC+TGG 0.387735 4.2:-33682359 MS.gene058019:CDS
GGAGTGTACAATAGAATTGC+AGG 0.392250 4.2:+33683983 None:intergenic
AGAACAACACCAGGATCAAT+AGG 0.395959 4.2:+33685291 None:intergenic
ACAACGAAGCTTCGAGGTCT+CGG 0.398831 4.2:+33685444 None:intergenic
CTAAAGATGGTGGAAGAACT+TGG 0.399326 4.2:-33684102 MS.gene058019:CDS
ATTCTCTTGAGAACTAATAA+TGG 0.408224 4.2:-33681121 MS.gene058019:CDS
TCCCAACTCTCTCCAGCATC+AGG 0.409768 4.2:+33683962 None:intergenic
GGATTTGTATTGGGAAATGA+TGG 0.410591 4.2:-33680180 MS.gene058019:CDS
CGAAGAAACTCTTTCTGAAT+GGG 0.410853 4.2:-33685328 MS.gene058019:CDS
TGAATTATGGATTTAGAAGA+AGG 0.411112 4.2:+33685471 None:intergenic
CACCATCTTTAGTCTCCAAA+AGG 0.415846 4.2:+33684113 None:intergenic
CATGACCTGGGAGCCTGGTC+AGG 0.417923 4.2:-33683019 MS.gene058019:intron
CCGAAGAAACTCTTTCTGAA+TGG 0.427453 4.2:-33685329 MS.gene058019:CDS
GCAGATAACTGAAGAGTTTG+AGG 0.428888 4.2:-33681627 MS.gene058019:intron
CCTGTTCAAAGCCGAGGGTT+CGG 0.431022 4.2:-33681599 MS.gene058019:CDS
CCGAACCCTCGGCTTTGAAC+AGG 0.435583 4.2:+33681599 None:intergenic
TTTAATTCTATCAGCTTCAA+AGG 0.439570 4.2:-33684031 MS.gene058019:CDS
GAATGTGCAGGTATACATAA+AGG 0.445622 4.2:-33683613 MS.gene058019:intron
ATGGATACAGGACGAGGCTT+GGG 0.449840 4.2:-33681161 MS.gene058019:intron
CCTCAAACAGAGGATACAAT+TGG 0.450180 4.2:-33683536 MS.gene058019:CDS
ACAGTTTCTAGTGGTATTAG+TGG 0.451172 4.2:-33683129 MS.gene058019:CDS
AATGAACTGTCTTCTGGTTC+TGG 0.453938 4.2:+33685401 None:intergenic
GTTTATCTTCCTATTGATCC+TGG 0.455494 4.2:-33685300 MS.gene058019:CDS
TTCTACATGACCTGGGAGCC+TGG 0.456770 4.2:-33683024 MS.gene058019:CDS
CGTGCTTGTTCCTTCTCAGT+TGG 0.461186 4.2:-33685358 MS.gene058019:CDS
GGTCTCTGGCTTCTTGTTCG+TGG 0.472681 4.2:-33682345 MS.gene058019:CDS
GCTTGGGCAGCAGGTGGCAG+TGG 0.472705 4.2:-33681145 MS.gene058019:CDS
GGAGTCTTGCTTCGCTACCT+TGG 0.483417 4.2:-33680159 MS.gene058019:CDS
AAATGATTATGACCATGGTT+AGG 0.486803 4.2:+33685240 None:intergenic
TATGGATACAGGACGAGGCT+TGG 0.491666 4.2:-33681162 MS.gene058019:intron
TTAATTCTATCAGCTTCAAA+GGG 0.492876 4.2:-33684030 MS.gene058019:CDS
CCTCACCTGACCAGGCTCCC+AGG 0.496515 4.2:+33683014 None:intergenic
GCTTTGACAACGAAGCTTCG+AGG 0.496960 4.2:+33685438 None:intergenic
CTGGCAACTGCTCTGTTATG+TGG 0.499429 4.2:+33682402 None:intergenic
GGTTCGGCATTCTTGATGTC+GGG 0.503991 4.2:-33681583 MS.gene058019:CDS
CTAATAATGGTGGCAAGTCA+TGG 0.505941 4.2:-33681108 MS.gene058019:CDS
GAAGAAGGTAGTTGAGATAA+CGG 0.506695 4.2:+33685486 None:intergenic
ATCAGCTTCAAAGGGAAAGA+AGG 0.507563 4.2:-33684022 MS.gene058019:CDS
CTATTGTACACTCCTGATGC+TGG 0.512463 4.2:-33683974 MS.gene058019:CDS
AGTGGTGCAAGCTATTACAC+TGG 0.515102 4.2:-33683111 MS.gene058019:CDS
GGGTTCGGCATTCTTGATGT+CGG 0.521429 4.2:-33681584 MS.gene058019:CDS
ACCATCTTTAGTCTCCAAAA+GGG 0.524391 4.2:+33684114 None:intergenic
AGTAAAAGCCTCACCTGACC+AGG 0.530594 4.2:+33683006 None:intergenic
CAGGTTCATTGATGACAAGA+AGG 0.533069 4.2:-33680202 MS.gene058019:CDS
CTCCTGATGCTGGAGAGAGT+TGG 0.533505 4.2:-33683964 MS.gene058019:CDS
TCGGATTTCGCCAACTGAGA+AGG 0.534102 4.2:+33685348 None:intergenic
TAATGAGAAGAGCGCGGAGA+TGG 0.535243 4.2:-33683586 MS.gene058019:CDS
GTGAATTGCAGAGTCGCCAT+TGG 0.540011 4.2:+33685540 None:intergenic
CATCAAGAATGCCGAACCCT+CGG 0.540289 4.2:+33681588 None:intergenic
CTCTTCAGAACAGTTTCTAG+TGG 0.545286 4.2:-33683138 MS.gene058019:intron
AAATCTTCATCTTCTGCGGA+TGG 0.551204 4.2:+33684064 None:intergenic
GTTAAAATCTTCATCTTCTG+CGG 0.555309 4.2:+33684060 None:intergenic
GAAGAATCCAGAACATGGGA+TGG 0.558266 4.2:-33682380 MS.gene058019:CDS
AACTGTCTTCTGGTTCTGGA+AGG 0.558899 4.2:+33685405 None:intergenic
AGCATGTATACCATATCGCC+AGG 0.562377 4.2:+33683914 None:intergenic
GCGGAGATGGTGACTGATGA+AGG 0.562743 4.2:-33683573 MS.gene058019:CDS
TGCCAGAAGAATCCAGAACA+TGG 0.568338 4.2:-33682385 MS.gene058019:CDS
CTAAATTAAAGCTCTATCCA+AGG 0.575896 4.2:+33680142 None:intergenic
TGTTGTCAGCAGCTTTGTCA+CGG 0.577018 4.2:+33681083 None:intergenic
ACTGCAACATACCTTCCATC+GGG 0.579159 4.2:+33683063 None:intergenic
GTGGCAACTTCTACATGACC+TGG 0.579453 4.2:-33683032 MS.gene058019:CDS
ATATATGTTACCTCAAACAG+AGG 0.581515 4.2:-33683546 MS.gene058019:CDS
GACTGCAACATACCTTCCAT+CGG 0.584903 4.2:+33683062 None:intergenic
GACGAGGCTTGGGCAGCAGG+TGG 0.586594 4.2:-33681151 MS.gene058019:CDS
AGGTTCATTGATGACAAGAA+GGG 0.586700 4.2:-33680201 MS.gene058019:CDS
GCTTCAAAGGGAAAGAAGGA+TGG 0.587319 4.2:-33684018 MS.gene058019:CDS
AACAAGCACGGATATGGCAG+TGG 0.589638 4.2:+33685371 None:intergenic
AAATTCCTGTTCAAAGCCGA+GGG 0.590036 4.2:-33681604 MS.gene058019:CDS
CTCTGGCTTCTTGTTCGTGG+AGG 0.590994 4.2:-33682342 MS.gene058019:CDS
GAAATTCCTGTTCAAAGCCG+AGG 0.592799 4.2:-33681605 MS.gene058019:CDS
TGATGTCGGGTATCGTTCAA+CGG 0.598924 4.2:-33681570 MS.gene058019:intron
GGGAAAGAAGGATGGATCGT+GGG 0.604713 4.2:-33684010 MS.gene058019:CDS
TAAAGATGGTGGAAGAACTT+GGG 0.606864 4.2:-33684101 MS.gene058019:CDS
GTTCCTGAAGATCCTAACCA+TGG 0.609851 4.2:-33685252 MS.gene058019:intron
TCAATCGATCTCCCGATGGA+AGG 0.610839 4.2:-33683074 MS.gene058019:CDS
TGCTGTTCAGGAATCAGTGT+CGG 0.620604 4.2:-33683508 MS.gene058019:CDS
ATGCTGGAGAGAGTTGGGAA+AGG 0.633423 4.2:-33683958 MS.gene058019:CDS
CTCTTGAGAACTAATAATGG+TGG 0.633424 4.2:-33681118 MS.gene058019:CDS
AACATGGGATGGAGAGCTGA+TGG 0.634621 4.2:-33682369 MS.gene058019:CDS
AGATAACGGTCTGCATAGTG+TGG 0.640173 4.2:+33685500 None:intergenic
GCCAGAAGAATCCAGAACAT+GGG 0.641481 4.2:-33682384 MS.gene058019:CDS
AAACAGAGGATACAATTGGA+AGG 0.654671 4.2:-33683532 MS.gene058019:CDS
TGGCAACTTCTACATGACCT+GGG 0.659223 4.2:-33683031 MS.gene058019:CDS
TATGTTGCAGTCTCAAGTCG+TGG 0.661059 4.2:-33683051 MS.gene058019:CDS
AGGGAAAGAAGGATGGATCG+TGG 0.669551 4.2:-33684011 MS.gene058019:CDS
ACTGTCAATCGATCTCCCGA+TGG 0.671901 4.2:-33683078 MS.gene058019:CDS
TAACGGTCTGCATAGTGTGG+CGG 0.676139 4.2:+33685503 None:intergenic
TCTGCGGATGGTATAGAACG+TGG 0.679981 4.2:+33684076 None:intergenic
ATATCAAGAAGAACAACACC+AGG 0.683523 4.2:+33685282 None:intergenic
CAACTGAGAAGGAACAAGCA+CGG 0.687509 4.2:+33685359 None:intergenic
GGCAACTAATGAGAAGAGCG+CGG 0.689314 4.2:-33683592 MS.gene058019:CDS
ATGGGATGGAGAGCTGATGG+TGG 0.712985 4.2:-33682366 MS.gene058019:CDS
CCAGGAAGTTCAGCACTGAG+CGG 0.727546 4.2:+33683932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATTATTATTAGTAGT+AGG - chr4.2:33681845-33681864 MS.gene058019:intron 10.0%
!! TATATTCTACAAAATATTAT+CGG + chr4.2:33684863-33684882 None:intergenic 10.0%
!! TTGAAAATAAAATAAAATTG+AGG + chr4.2:33684003-33684022 None:intergenic 10.0%
!!! ATATTTTCATAAGTTATTTT+CGG + chr4.2:33681160-33681179 None:intergenic 10.0%
!!! TATTTTTTTCATAGAAATAT+GGG + chr4.2:33681268-33681287 None:intergenic 10.0%
!!! TTATTTTTTTCATAGAAATA+TGG + chr4.2:33681269-33681288 None:intergenic 10.0%
!! AAAAAGAAATTACAAAATGT+AGG - chr4.2:33680892-33680911 MS.gene058019:intron 15.0%
!! ATACAAAATTTGCAAAATTA+TGG - chr4.2:33684512-33684531 MS.gene058019:intron 15.0%
!! GATACATTAAAAATATTCTT+AGG - chr4.2:33682838-33682857 MS.gene058019:intron 15.0%
!!! CATTTTGTAATTTCTTTTTT+TGG + chr4.2:33680891-33680910 None:intergenic 15.0%
!!! TTTGAGATTTATTATATATG+TGG + chr4.2:33683911-33683930 None:intergenic 15.0%
!! AAAATAATGATAGAAGTGAA+AGG + chr4.2:33683887-33683906 None:intergenic 20.0%
!! AAATAAACCAAAATGAAAAG+TGG + chr4.2:33683727-33683746 None:intergenic 20.0%
!! AAATAATGATAGAAGTGAAA+GGG + chr4.2:33683886-33683905 None:intergenic 20.0%
!! AATAAAGGAAAATAAAGTAG+TGG + chr4.2:33685283-33685302 None:intergenic 20.0%
!! AATAAGGTGAAAATATCTTA+TGG - chr4.2:33681335-33681354 MS.gene058019:intron 20.0%
!! AATAAGTTGTTTATCAAAAC+AGG + chr4.2:33680978-33680997 None:intergenic 20.0%
!! ACATTAAGACATATATTACA+AGG + chr4.2:33683138-33683157 None:intergenic 20.0%
!! ATATTATTATTAGTAGTAGG+AGG - chr4.2:33681848-33681867 MS.gene058019:intron 20.0%
!! ATCAGTCTTAAAAAAAACAT+TGG - chr4.2:33684402-33684421 MS.gene058019:intron 20.0%
!! ATTGACCAAAAAGAATTTAA+TGG + chr4.2:33683940-33683959 None:intergenic 20.0%
!! CACACATGAAAAATAAATAT+AGG - chr4.2:33685399-33685418 MS.gene058019:CDS 20.0%
!! GTAGATAAATACAATACATT+CGG + chr4.2:33683757-33683776 None:intergenic 20.0%
!! TATATAATAATACATGAGTG+AGG + chr4.2:33684296-33684315 None:intergenic 20.0%
!! TATGAATGTTAATACGAAAA+GGG + chr4.2:33684323-33684342 None:intergenic 20.0%
!! TATTAATACATTTGGAAGTA+GGG - chr4.2:33682386-33682405 MS.gene058019:CDS 20.0%
!! TTATGAATGTTAATACGAAA+AGG + chr4.2:33684324-33684343 None:intergenic 20.0%
!! TTTGAATTTGTGTTGTAAAA+TGG - chr4.2:33681511-33681530 MS.gene058019:intron 20.0%
!! TTTGATTGAGTATATTTAAG+TGG - chr4.2:33684232-33684251 MS.gene058019:intron 20.0%
!!! AAATGTTTTCTTAAAAGTAG+TGG + chr4.2:33682948-33682967 None:intergenic 20.0%
!!! AAATTTGTTTCTAATGTAGA+AGG - chr4.2:33680809-33680828 MS.gene058019:intron 20.0%
!!! AAGATGAAGATTTTAACTAT+AGG - chr4.2:33681638-33681657 MS.gene058019:intron 20.0%
!!! ACACTGCAAATATTTTATTT+CGG - chr4.2:33682499-33682518 MS.gene058019:intron 20.0%
!!! CATGATTTGTAATAGAAATA+TGG + chr4.2:33681453-33681472 None:intergenic 20.0%
!!! CTACTTTTAAGAAAACATTT+CGG - chr4.2:33682948-33682967 MS.gene058019:intron 20.0%
!!! CTATATTTATTTTTCATGTG+TGG + chr4.2:33685401-33685420 None:intergenic 20.0%
!!! CTATGGACTAAAATATAAAA+TGG - chr4.2:33684937-33684956 MS.gene058019:intron 20.0%
!!! TACATGTTTATTTCATTTTC+AGG - chr4.2:33683256-33683275 MS.gene058019:intron 20.0%
!!! TTGATCCATTAAATTCTTTT+TGG - chr4.2:33683932-33683951 MS.gene058019:CDS 20.0%
! AAAAAAGAAATCTATCCAGA+AGG + chr4.2:33683473-33683492 None:intergenic 25.0%
! AAAAAGAAATCTATCCAGAA+GGG + chr4.2:33683472-33683491 None:intergenic 25.0%
! AAAGAGTTACATTCCTTAAA+TGG + chr4.2:33682311-33682330 None:intergenic 25.0%
! AAATGAAATGATTATGACCA+TGG + chr4.2:33680460-33680479 None:intergenic 25.0%
! AAATGATATCTATGGCTAAA+TGG + chr4.2:33683195-33683214 None:intergenic 25.0%
! AAGCTATCATAGAAAACTTA+TGG + chr4.2:33680586-33680605 None:intergenic 25.0%
! AGTGTTTATTTGTGTAAAAC+TGG - chr4.2:33684885-33684904 MS.gene058019:intron 25.0%
! ATAAATATAGGAGATTCTGA+AGG - chr4.2:33685411-33685430 MS.gene058019:CDS 25.0%
! ATGAATGTTAATACGAAAAG+GGG + chr4.2:33684322-33684341 None:intergenic 25.0%
! ATTAAACTGTTTATCCAAAG+AGG - chr4.2:33680724-33680743 MS.gene058019:intron 25.0%
! ATTCTCTTGAGAACTAATAA+TGG - chr4.2:33684571-33684590 MS.gene058019:intron 25.0%
! ATTTGCAAAATTATGGATAC+AGG - chr4.2:33684519-33684538 MS.gene058019:intron 25.0%
! CAGTTGAAATGATTAATGTT+TGG + chr4.2:33681977-33681996 None:intergenic 25.0%
! GAAAATAAAGTAGTGGTATT+GGG + chr4.2:33685276-33685295 None:intergenic 25.0%
! GAAAGTCGTATTAATACATT+TGG - chr4.2:33682378-33682397 MS.gene058019:CDS 25.0%
! GAATGCATAATGTATATGTA+TGG - chr4.2:33682271-33682290 MS.gene058019:intron 25.0%
! GGACTAAAATATAAAATGGA+TGG - chr4.2:33684941-33684960 MS.gene058019:intron 25.0%
! GTATTAATACATTTGGAAGT+AGG - chr4.2:33682385-33682404 MS.gene058019:CDS 25.0%
! TAATCAAGTGTTTATAGCAT+AGG + chr4.2:33680708-33680727 None:intergenic 25.0%
! TACAAAATGTAGGTACTATT+TGG - chr4.2:33680902-33680921 MS.gene058019:intron 25.0%
! TACAGGATGTAAAACATTAT+GGG + chr4.2:33683797-33683816 None:intergenic 25.0%
! TGAATTATGGATTTAGAAGA+AGG + chr4.2:33680224-33680243 None:intergenic 25.0%
! TTAAACTGTTTATCCAAAGA+GGG - chr4.2:33680725-33680744 MS.gene058019:intron 25.0%
! TTAATTCTATCAGCTTCAAA+GGG - chr4.2:33681662-33681681 MS.gene058019:intron 25.0%
! TTATCATGTATAAGTGCTTA+TGG + chr4.2:33680660-33680679 None:intergenic 25.0%
! TTCTACAAAATATTATCGGT+TGG + chr4.2:33684859-33684878 None:intergenic 25.0%
! TTTAATTCTATCAGCTTCAA+AGG - chr4.2:33681661-33681680 MS.gene058019:intron 25.0%
! TTTGTGTTGTAAAATGGAAA+CGG - chr4.2:33681517-33681536 MS.gene058019:intron 25.0%
!! AATTGACTTATTTGAGCTTA+TGG - chr4.2:33680542-33680561 MS.gene058019:intron 25.0%
!! AGAGTTTGTAGAACTTTTAT+TGG - chr4.2:33685436-33685455 MS.gene058019:CDS 25.0%
!! AGTTCTAATCAAAGAAGATT+CGG + chr4.2:33682874-33682893 None:intergenic 25.0%
!! TAAAATTTTACTGCATTCAG+AGG - chr4.2:33684145-33684164 MS.gene058019:intron 25.0%
!! TTGGTGATAAATCTTGTAAA+TGG - chr4.2:33685455-33685474 MS.gene058019:CDS 25.0%
!! TTTAGCCATAGATATCATTT+TGG - chr4.2:33683195-33683214 MS.gene058019:intron 25.0%
!!! ACTTGTACATTTTCTAAGAA+AGG + chr4.2:33683857-33683876 None:intergenic 25.0%
!!! CTTGTACATTTTCTAAGAAA+GGG + chr4.2:33683856-33683875 None:intergenic 25.0%
!!! GAAATATGGTTTGTTCAAAT+TGG + chr4.2:33681439-33681458 None:intergenic 25.0%
!!! GATAAAAACTAGTTTTGTGT+TGG - chr4.2:33680757-33680776 MS.gene058019:intron 25.0%
!!! TGAAGTCAAACTGTTTTTAT+AGG - chr4.2:33681291-33681310 MS.gene058019:intron 25.0%
!!! TTGTACATTTTCTAAGAAAG+GGG + chr4.2:33683855-33683874 None:intergenic 25.0%
AAAATTGAGGATGTAATCAG+TGG + chr4.2:33683990-33684009 None:intergenic 30.0%
AAATACAATACATTCGGTAG+AGG + chr4.2:33683751-33683770 None:intergenic 30.0%
AAATGATTATGACCATGGTT+AGG + chr4.2:33680455-33680474 None:intergenic 30.0%
AACTGTACAAAAGTAACTGT+TGG - chr4.2:33681992-33682011 MS.gene058019:intron 30.0%
AATAATCCCTATCTCACTAA+AGG + chr4.2:33685020-33685039 None:intergenic 30.0%
ACAGGATGTAAAACATTATG+GGG + chr4.2:33683796-33683815 None:intergenic 30.0%
ACATTCCTTAAATGGCATTA+TGG + chr4.2:33682303-33682322 None:intergenic 30.0%
ACCAACCAAAATGATATCTA+TGG + chr4.2:33683203-33683222 None:intergenic 30.0%
ACCTATTACCAAACAAGATA+AGG + chr4.2:33683647-33683666 None:intergenic 30.0%
AGAAGTGAAAAGGGATTAAA+AGG - chr4.2:33683826-33683845 MS.gene058019:intron 30.0%
ATACTATAAGAGCTCAGTTA+AGG + chr4.2:33680935-33680954 None:intergenic 30.0%
ATATATGTTACCTCAAACAG+AGG - chr4.2:33682146-33682165 MS.gene058019:intron 30.0%
ATCCTGTGCTAACAATATAA+CGG + chr4.2:33685368-33685387 None:intergenic 30.0%
CTACAGGATGTAAAACATTA+TGG + chr4.2:33683798-33683817 None:intergenic 30.0%
CTGTATCATGGAAATAACTA+TGG - chr4.2:33684920-33684939 MS.gene058019:intron 30.0%
CTTCTGCACTAATAGTAATA+GGG - chr4.2:33683227-33683246 MS.gene058019:intron 30.0%
GAAGTGAAAAGGGATTAAAA+GGG - chr4.2:33683827-33683846 MS.gene058019:intron 30.0%
GAGAATATATCAACAACATG+AGG + chr4.2:33684772-33684791 None:intergenic 30.0%
GATTGAGTATATTTAAGTGG+CGG - chr4.2:33684235-33684254 MS.gene058019:intron 30.0%
GCATAATGTATATGTATGGA+TGG - chr4.2:33682275-33682294 MS.gene058019:intron 30.0%
GGAAAATAAAGTAGTGGTAT+TGG + chr4.2:33685277-33685296 None:intergenic 30.0%
GTACAATTAGATAAACCACA+TGG + chr4.2:33682767-33682786 None:intergenic 30.0%
GTACACTAGAATGATATTCT+TGG + chr4.2:33683414-33683433 None:intergenic 30.0%
GTTAAAATCTTCATCTTCTG+CGG + chr4.2:33681635-33681654 None:intergenic 30.0%
GTTTATTTGTGTAAAACTGG+AGG - chr4.2:33684888-33684907 MS.gene058019:intron 30.0%
TAGCTTATACGAAATTAGCA+TGG - chr4.2:33680600-33680619 MS.gene058019:intron 30.0%
TATACTCAAGAGTAGCAATA+TGG - chr4.2:33682356-33682375 MS.gene058019:CDS 30.0%
TATTAGCATCTCTTGAGAAT+AGG + chr4.2:33684833-33684852 None:intergenic 30.0%
TCTTCTGCACTAATAGTAAT+AGG - chr4.2:33683226-33683245 MS.gene058019:intron 30.0%
TGGATGTACAAGAAGATTAT+TGG + chr4.2:33682928-33682947 None:intergenic 30.0%
TGTAGAAATAGCCTATTCAT+AGG + chr4.2:33681052-33681071 None:intergenic 30.0%
TGTGGTTTATCTAATTGTAC+AGG - chr4.2:33682767-33682786 MS.gene058019:intron 30.0%
TTCTGATAATTGCATCTGAT+AGG + chr4.2:33685333-33685352 None:intergenic 30.0%
TTGGAGAGCTTATTGAAATA+AGG - chr4.2:33681319-33681338 MS.gene058019:intron 30.0%
TTTACTCTCCTTATCTTGTT+TGG - chr4.2:33683636-33683655 MS.gene058019:intron 30.0%
! TAACCAGAAAGACTTTGAAA+TGG + chr4.2:33683515-33683534 None:intergenic 30.0%
! TCCTTATCTTGTTTGGTAAT+AGG - chr4.2:33683643-33683662 MS.gene058019:intron 30.0%
! TTCAGAGGATTGCTTTATTA+AGG - chr4.2:33684160-33684179 MS.gene058019:intron 30.0%
! TTCTTTGATTGATTTCATCC+AGG - chr4.2:33682975-33682994 MS.gene058019:intron 30.0%
! TTTTACATCCTGTAGAAGTA+GGG - chr4.2:33683803-33683822 MS.gene058019:intron 30.0%
!! AACCAGAAAGACTTTGAAAT+GGG + chr4.2:33683514-33683533 None:intergenic 30.0%
!! TATTTCATTTTCAGGCATAC+TGG - chr4.2:33683264-33683283 MS.gene058019:intron 30.0%
!! TGCATAATTTTGAGAACAGA+AGG - chr4.2:33684030-33684049 MS.gene058019:CDS 30.0%
!! TTGCTTGGTAGTTTTACTTT+TGG - chr4.2:33682737-33682756 MS.gene058019:intron 30.0%
!!! ACTGTTTTTATAGGCTATCT+TGG - chr4.2:33681300-33681319 MS.gene058019:intron 30.0%
!!! GTTAGCAGAATTTTTTCTTC+AGG + chr4.2:33683025-33683044 None:intergenic 30.0%
!!! TAAGGAAAATGTTGTTTTGC+TGG - chr4.2:33684178-33684197 MS.gene058019:intron 30.0%
AAAATTATGGATACAGGACG+AGG - chr4.2:33684525-33684544 MS.gene058019:intron 35.0%
AAACACTTGTGAGACTGTTT+GGG + chr4.2:33681206-33681225 None:intergenic 35.0%
AAACAGAGGATACAATTGGA+AGG - chr4.2:33682160-33682179 MS.gene058019:intron 35.0%
ACATAAGTTGTTGAATGTGC+AGG - chr4.2:33682067-33682086 MS.gene058019:intron 35.0%
ACCATCTTTAGTCTCCAAAA+GGG + chr4.2:33681581-33681600 None:intergenic 35.0%
AGCAGGTTAGAATTAGAGAA+AGG + chr4.2:33685149-33685168 None:intergenic 35.0%
AGGAGTAATACAAAGACCAA+TGG + chr4.2:33684808-33684827 None:intergenic 35.0%
ATATCAAGAAGAACAACACC+AGG + chr4.2:33680413-33680432 None:intergenic 35.0%
ATCCAGGTGATATCATTGAT+AGG - chr4.2:33682991-33683010 MS.gene058019:intron 35.0%
ATCCGTTATATTGTTAGCAC+AGG - chr4.2:33685363-33685382 MS.gene058019:CDS 35.0%
ATCCTATCAATGATATCACC+TGG + chr4.2:33682996-33683015 None:intergenic 35.0%
CAATTCCAGTCACACAATAT+AGG + chr4.2:33680527-33680546 None:intergenic 35.0%
CAGTTACATCAAACGAAGTT+TGG + chr4.2:33682246-33682265 None:intergenic 35.0%
CATAGAAATATGGGTCTGTT+TGG + chr4.2:33681259-33681278 None:intergenic 35.0%
CCATTCAGAAAGAGTTTCTT+CGG + chr4.2:33680366-33680385 None:intergenic 35.0%
CGAAGAAACTCTTTCTGAAT+GGG - chr4.2:33680364-33680383 MS.gene058019:intron 35.0%
CTACCAAAATTTCCACTTCA+CGG - chr4.2:33685050-33685069 MS.gene058019:intron 35.0%
CTCTTGAGAACTAATAATGG+TGG - chr4.2:33684574-33684593 MS.gene058019:intron 35.0%
CTTGGAGAAATGAAAACAGT+CGG - chr4.2:33684974-33684993 MS.gene058019:intron 35.0%
GAAGAAGGTAGTTGAGATAA+CGG + chr4.2:33680209-33680228 None:intergenic 35.0%
GAATGTAACTCTTTCAAGCT+AGG - chr4.2:33682317-33682336 MS.gene058019:CDS 35.0%
GAATGTGCAGGTATACATAA+AGG - chr4.2:33682079-33682098 MS.gene058019:intron 35.0%
GACAAGAAGGGATTTGTATT+GGG - chr4.2:33685503-33685522 MS.gene058019:CDS 35.0%
GATGTGGAAGAAAGAGAAAA+AGG + chr4.2:33685201-33685220 None:intergenic 35.0%
GGATTTGTATTGGGAAATGA+TGG - chr4.2:33685512-33685531 MS.gene058019:CDS 35.0%
GTCTTAATGTCTCGAATAGT+TGG - chr4.2:33683148-33683167 MS.gene058019:intron 35.0%
GTTAGAATTAGAGAAAGGTG+AGG + chr4.2:33685144-33685163 None:intergenic 35.0%
GTTTATCTTCCTATTGATCC+TGG - chr4.2:33680392-33680411 MS.gene058019:intron 35.0%
TAAACACTTGTGAGACTGTT+TGG + chr4.2:33681207-33681226 None:intergenic 35.0%
TAATACATTTGGAAGTAGGG+TGG - chr4.2:33682389-33682408 MS.gene058019:CDS 35.0%
TATCATTTCTATGCCCTCTT+TGG + chr4.2:33680741-33680760 None:intergenic 35.0%
TATGGTGCATGTTTATAGGA+GGG + chr4.2:33685308-33685327 None:intergenic 35.0%
TGACAAGAAGGGATTTGTAT+TGG - chr4.2:33685502-33685521 MS.gene058019:CDS 35.0%
! AGGTTCATTGATGACAAGAA+GGG - chr4.2:33685491-33685510 MS.gene058019:CDS 35.0%
! GTTTTACATCCTGTAGAAGT+AGG - chr4.2:33683802-33683821 MS.gene058019:intron 35.0%
! TGCTTTTGCTTCTATTTGCT+TGG - chr4.2:33682722-33682741 MS.gene058019:intron 35.0%
! TGGATCCATAATGCCATTTA+AGG - chr4.2:33682295-33682314 MS.gene058019:intron 35.0%
! TTTTGCCTATATTGTGTGAC+TGG - chr4.2:33680519-33680538 MS.gene058019:intron 35.0%
!! AAGTGGAAATTTTGGTAGCT+GGG + chr4.2:33685048-33685067 None:intergenic 35.0%
!! ACAGTTTCTAGTGGTATTAG+TGG - chr4.2:33682563-33682582 MS.gene058019:intron 35.0%
!! AGACTTTGAAATGGGTGAAA+AGG + chr4.2:33683506-33683525 None:intergenic 35.0%
!! GCCATAGATATCATTTTGGT+TGG - chr4.2:33683199-33683218 MS.gene058019:intron 35.0%
!! TAAAGATGGTGGAAGAACTT+GGG - chr4.2:33681591-33681610 MS.gene058019:CDS 35.0%
!! TAAAGGAGGTACTCTTACTA+AGG + chr4.2:33685003-33685022 None:intergenic 35.0%
!!! AGCAGAATTTTTTCTTCAGG+AGG + chr4.2:33683022-33683041 None:intergenic 35.0%
AAAGAGAAAAAGGAGCAGGA+AGG + chr4.2:33685191-33685210 None:intergenic 40.0%
AAAGGTGAGGAAATCATTGG+CGG + chr4.2:33685131-33685150 None:intergenic 40.0%
AAATCTTCATCTTCTGCGGA+TGG + chr4.2:33681631-33681650 None:intergenic 40.0%
AAATTCCTGTTCAAAGCCGA+GGG - chr4.2:33684088-33684107 MS.gene058019:CDS 40.0%
AAGGGAATGAGTGAAAAGGA+AGG + chr4.2:33683454-33683473 None:intergenic 40.0%
AATCCCTATCTCACTAAAGG+AGG + chr4.2:33685017-33685036 None:intergenic 40.0%
AATGAAAAGTGGACAGCACA+AGG + chr4.2:33683716-33683735 None:intergenic 40.0%
AATGTCTCGAATAGTTGGCT+TGG - chr4.2:33683153-33683172 MS.gene058019:intron 40.0%
AATTGCATCTGATAGGCCTA+TGG + chr4.2:33685326-33685345 None:intergenic 40.0%
AGAACAACACCAGGATCAAT+AGG + chr4.2:33680404-33680423 None:intergenic 40.0%
AGAAGTAGGGAGAAGTGAAA+AGG - chr4.2:33683816-33683835 MS.gene058019:intron 40.0%
AGGAGTTAGCATCTGTATCA+TGG - chr4.2:33684908-33684927 MS.gene058019:intron 40.0%
AGGTCTCGGAGAATGAATTA+TGG + chr4.2:33680237-33680256 None:intergenic 40.0%
AGTACCTCCTTTAGTGAGAT+AGG - chr4.2:33685010-33685029 MS.gene058019:intron 40.0%
ATACCCCCTTCATTCTGTTA+CGG - chr4.2:33685078-33685097 MS.gene058019:intron 40.0%
ATCAGCTTCAAAGGGAAAGA+AGG - chr4.2:33681670-33681689 MS.gene058019:intron 40.0%
ATGAAAAGTGGACAGCACAA+GGG + chr4.2:33683715-33683734 None:intergenic 40.0%
ATGGATGGAGATGATCTACT+TGG - chr4.2:33684956-33684975 MS.gene058019:intron 40.0%
ATGGTGCATGTTTATAGGAG+GGG + chr4.2:33685307-33685326 None:intergenic 40.0%
ATTAGTAGTAGGAGGAGTAG+TGG - chr4.2:33681856-33681875 MS.gene058019:intron 40.0%
CAAGGGAAGAGAATGCAATA+AGG + chr4.2:33683698-33683717 None:intergenic 40.0%
CACCATCTTTAGTCTCCAAA+AGG + chr4.2:33681582-33681601 None:intergenic 40.0%
CACCCATTTCAAAGTCTTTC+TGG - chr4.2:33683509-33683528 MS.gene058019:CDS 40.0%
CAGTGCAAAAAGCAAAAGAG+AGG + chr4.2:33683067-33683086 None:intergenic 40.0%
CCAATTGTATCCTCTGTTTG+AGG + chr4.2:33682159-33682178 None:intergenic 40.0%
CCGAAGAAACTCTTTCTGAA+TGG - chr4.2:33680363-33680382 MS.gene058019:intron 40.0%
CCTCAAACAGAGGATACAAT+TGG - chr4.2:33682156-33682175 MS.gene058019:intron 40.0%
CGAGAGCTCTACAAGTAAAT+TGG + chr4.2:33684731-33684750 None:intergenic 40.0%
CTAATAATGGTGGCAAGTCA+TGG - chr4.2:33684584-33684603 MS.gene058019:intron 40.0%
CTATGGTGCATGTTTATAGG+AGG + chr4.2:33685309-33685328 None:intergenic 40.0%
CTCCTATAAACATGCACCAT+AGG - chr4.2:33685307-33685326 MS.gene058019:CDS 40.0%
CTTATGGACATGTCGTAAGT+TGG - chr4.2:33681351-33681370 MS.gene058019:intron 40.0%
GAAGAAAGAGAAAAAGGAGC+AGG + chr4.2:33685195-33685214 None:intergenic 40.0%
GAAGGCCACTAGTATCATAT+GGG + chr4.2:33683436-33683455 None:intergenic 40.0%
GAAGTAGGGAGAAGTGAAAA+GGG - chr4.2:33683817-33683836 MS.gene058019:intron 40.0%
GACCAATGGAACAAAAGAAG+TGG + chr4.2:33684794-33684813 None:intergenic 40.0%
GAGAAAGGTGAGGAAATCAT+TGG + chr4.2:33685134-33685153 None:intergenic 40.0%
GAGCTCTACAAGTAAATTGG+AGG + chr4.2:33684728-33684747 None:intergenic 40.0%
GCAGATAACTGAAGAGTTTG+AGG - chr4.2:33684065-33684084 MS.gene058019:CDS 40.0%
GCATCTCTTGAGAATAGGAA+AGG + chr4.2:33684828-33684847 None:intergenic 40.0%
GGAGTGTACAATAGAATTGC+AGG + chr4.2:33681712-33681731 None:intergenic 40.0%
GTACCTCCTTTAGTGAGATA+GGG - chr4.2:33685011-33685030 MS.gene058019:intron 40.0%
GTAGCAGTAGAAACAAGCAT+TGG + chr4.2:33681814-33681833 None:intergenic 40.0%
GTGCAAGATAGAGATAGAGA+TGG + chr4.2:33683599-33683618 None:intergenic 40.0%
GTGTACCCATATGATACTAG+TGG - chr4.2:33683428-33683447 MS.gene058019:intron 40.0%
GTTTATAGGAGGGGGAATAA+AGG + chr4.2:33685298-33685317 None:intergenic 40.0%
TATCAACAACATGAGGAACC+TGG + chr4.2:33684765-33684784 None:intergenic 40.0%
TCCTCTAAGTGCCTATGAAT+AGG - chr4.2:33681038-33681057 MS.gene058019:intron 40.0%
TTCTGCAATGAACTGTCTTC+TGG + chr4.2:33680300-33680319 None:intergenic 40.0%
! AAATGGAAACGGATTTGTCC+TGG - chr4.2:33681528-33681547 MS.gene058019:intron 40.0%
! ACATAGCTTTTGCGTTGAGT+TGG - chr4.2:33681910-33681929 MS.gene058019:intron 40.0%
! ATGTCTCGAATAGTTGGCTT+GGG - chr4.2:33683154-33683173 MS.gene058019:intron 40.0%
! CAGGTTCATTGATGACAAGA+AGG - chr4.2:33685490-33685509 MS.gene058019:CDS 40.0%
! CTCCACTTCTTTTGTTCCAT+TGG - chr4.2:33684789-33684808 MS.gene058019:intron 40.0%
! CTCTTCAGAACAGTTTCTAG+TGG - chr4.2:33682554-33682573 MS.gene058019:intron 40.0%
! GATCCGTGAAGTGGAAATTT+TGG + chr4.2:33685056-33685075 None:intergenic 40.0%
! GGTAGTCTTTTTCTCAGCAA+AGG - chr4.2:33683371-33683390 MS.gene058019:intron 40.0%
! GTGAGGCTTTTACTTAGTGA+TGG - chr4.2:33682695-33682714 MS.gene058019:intron 40.0%
! GTTTTGTCACACTTTTCACG+TGG - chr4.2:33683567-33683586 MS.gene058019:CDS 40.0%
! TAAATGGTTTCACTTGCTGC+AGG - chr4.2:33685471-33685490 MS.gene058019:CDS 40.0%
!! AATGAACTGTCTTCTGGTTC+TGG + chr4.2:33680294-33680313 None:intergenic 40.0%
!! ACCCTTTTGGAGACTAAAGA+TGG - chr4.2:33681577-33681596 MS.gene058019:CDS 40.0%
!! CACTAGAAACTGTTCTGAAG+AGG + chr4.2:33682556-33682575 None:intergenic 40.0%
!! CTAAAGATGGTGGAAGAACT+TGG - chr4.2:33681590-33681609 MS.gene058019:CDS 40.0%
!! CTTTTGGAGACTAAAGATGG+TGG - chr4.2:33681580-33681599 MS.gene058019:CDS 40.0%
!! GAAGTGGAAATTTTGGTAGC+TGG + chr4.2:33685049-33685068 None:intergenic 40.0%
!! GACAAAGAGGAGGTATTTAG+AGG + chr4.2:33685105-33685124 None:intergenic 40.0%
!! GTGCTGTCCACTTTTCATTT+TGG - chr4.2:33683717-33683736 MS.gene058019:intron 40.0%
!! TTTACTTTTGGCATGCCATG+TGG - chr4.2:33682749-33682768 MS.gene058019:intron 40.0%
!! TTTTTCTCAGCAAAGGCACA+GGG - chr4.2:33683378-33683397 MS.gene058019:intron 40.0%
AAGTGTGCATCAACGGAGAA+AGG + chr4.2:33685238-33685257 None:intergenic 45.0%
ACAACATGAGGAACCTGGTT+TGG + chr4.2:33684760-33684779 None:intergenic 45.0%
ACTGCAACATACCTTCCATC+GGG + chr4.2:33682632-33682651 None:intergenic 45.0%
AGAAGGAACAAGCACGGATA+TGG + chr4.2:33680330-33680349 None:intergenic 45.0%
AGAGGACCGTAACAGAATGA+AGG + chr4.2:33685087-33685106 None:intergenic 45.0%
AGCAGGAAGGAGTAACAACA+TGG + chr4.2:33685178-33685197 None:intergenic 45.0%
AGCATGTATACCATATCGCC+AGG + chr4.2:33681781-33681800 None:intergenic 45.0%
AGGACCGTAACAGAATGAAG+GGG + chr4.2:33685085-33685104 None:intergenic 45.0%
AGTGGTGCAAGCTATTACAC+TGG - chr4.2:33682581-33682600 MS.gene058019:intron 45.0%
AGTGTGCATCAACGGAGAAA+GGG + chr4.2:33685237-33685256 None:intergenic 45.0%
CAACTGAGAAGGAACAAGCA+CGG + chr4.2:33680336-33680355 None:intergenic 45.0%
CCAGAAGGGAATGAGTGAAA+AGG + chr4.2:33683458-33683477 None:intergenic 45.0%
CTATTGTACACTCCTGATGC+TGG - chr4.2:33681718-33681737 MS.gene058019:intron 45.0%
GAAATTCCTGTTCAAAGCCG+AGG - chr4.2:33684087-33684106 MS.gene058019:CDS 45.0%
GAAGAATCCAGAACATGGGA+TGG - chr4.2:33683312-33683331 MS.gene058019:intron 45.0%
GACTGCAACATACCTTCCAT+CGG + chr4.2:33682633-33682652 None:intergenic 45.0%
GAGGACCGTAACAGAATGAA+GGG + chr4.2:33685086-33685105 None:intergenic 45.0%
GCCAGAAGAATCCAGAACAT+GGG - chr4.2:33683308-33683327 MS.gene058019:intron 45.0%
GCCTATTCATAGGCACTTAG+AGG + chr4.2:33681042-33681061 None:intergenic 45.0%
GCTTCAAAGGGAAAGAAGGA+TGG - chr4.2:33681674-33681693 MS.gene058019:intron 45.0%
GGAAGGCCACTAGTATCATA+TGG + chr4.2:33683437-33683456 None:intergenic 45.0%
GGCCTATGGTGCATGTTTAT+AGG + chr4.2:33685312-33685331 None:intergenic 45.0%
GTTCCTGAAGATCCTAACCA+TGG - chr4.2:33680440-33680459 MS.gene058019:intron 45.0%
TAACAACATGGACAGCTAGC+AGG + chr4.2:33685166-33685185 None:intergenic 45.0%
TATGTTGCAGTCTCAAGTCG+TGG - chr4.2:33682641-33682660 MS.gene058019:intron 45.0%
TCAACGGAGAAAGGGACAAA+TGG + chr4.2:33685229-33685248 None:intergenic 45.0%
TCACTTCTCCCTACTTCTAC+AGG + chr4.2:33683814-33683833 None:intergenic 45.0%
TGACCATGGTTAGGATCTTC+AGG + chr4.2:33680446-33680465 None:intergenic 45.0%
TGCCAGAAGAATCCAGAACA+TGG - chr4.2:33683307-33683326 MS.gene058019:intron 45.0%
TGCTGTTCAGGAATCAGTGT+CGG - chr4.2:33682184-33682203 MS.gene058019:intron 45.0%
TGGCAACTTCTACATGACCT+GGG - chr4.2:33682661-33682680 MS.gene058019:intron 45.0%
TGGTGCATGTTTATAGGAGG+GGG + chr4.2:33685306-33685325 None:intergenic 45.0%
! AGATAACGGTCTGCATAGTG+TGG + chr4.2:33680195-33680214 None:intergenic 45.0%
! CCTTTTCACTCATTCCCTTC+TGG - chr4.2:33683455-33683474 MS.gene058019:intron 45.0%
! GGTATTGGGTCTAAAGAGCA+AGG + chr4.2:33685262-33685281 None:intergenic 45.0%
! GTCCTGGTAGGTTTTCTTCT+GGG - chr4.2:33681544-33681563 MS.gene058019:intron 45.0%
! TCCCATGTTCTGGATTCTTC+TGG + chr4.2:33683312-33683331 None:intergenic 45.0%
! TCCTGGTAGGTTTTCTTCTG+GGG - chr4.2:33681545-33681564 MS.gene058019:intron 45.0%
! TGATGTCGGGTATCGTTCAA+CGG - chr4.2:33684122-33684141 MS.gene058019:CDS 45.0%
! TGTCCTGGTAGGTTTTCTTC+TGG - chr4.2:33681543-33681562 MS.gene058019:intron 45.0%
! TGTTGTCAGCAGCTTTGTCA+CGG + chr4.2:33684612-33684631 None:intergenic 45.0%
!! AACTGTCTTCTGGTTCTGGA+AGG + chr4.2:33680290-33680309 None:intergenic 45.0%
!! ATGAGGAACCTGGTTTGGTT+GGG + chr4.2:33684755-33684774 None:intergenic 45.0%
!! CAGTGTCGGCTACTCTTAAT+AGG - chr4.2:33682198-33682217 MS.gene058019:intron 45.0%
!! CTTTTTCTCAGCAAAGGCAC+AGG - chr4.2:33683377-33683396 MS.gene058019:intron 45.0%
!! TTTTCTCAGCAAAGGCACAG+GGG - chr4.2:33683379-33683398 MS.gene058019:intron 45.0%
AACAAGCACGGATATGGCAG+TGG + chr4.2:33680324-33680343 None:intergenic 50.0%
AACATGGGATGGAGAGCTGA+TGG - chr4.2:33683323-33683342 MS.gene058019:intron 50.0%
AAGGATGAGCTGACGCATCA+TGG + chr4.2:33683119-33683138 None:intergenic 50.0%
ACAACGAAGCTTCGAGGTCT+CGG + chr4.2:33680251-33680270 None:intergenic 50.0%
ACTGTCAATCGATCTCCCGA+TGG - chr4.2:33682614-33682633 MS.gene058019:intron 50.0%
AGGGAAAGAAGGATGGATCG+TGG - chr4.2:33681681-33681700 MS.gene058019:intron 50.0%
AGTAAAAGCCTCACCTGACC+AGG + chr4.2:33682689-33682708 None:intergenic 50.0%
ATGCTGGAGAGAGTTGGGAA+AGG - chr4.2:33681734-33681753 MS.gene058019:intron 50.0%
ATGGATACAGGACGAGGCTT+GGG - chr4.2:33684531-33684550 MS.gene058019:intron 50.0%
CAATTGGAAGGCTGCTGTTC+AGG - chr4.2:33682172-33682191 MS.gene058019:intron 50.0%
CATCAAGAATGCCGAACCCT+CGG + chr4.2:33684107-33684126 None:intergenic 50.0%
CGTGCTTGTTCCTTCTCAGT+TGG - chr4.2:33680334-33680353 MS.gene058019:intron 50.0%
CTGGCAACTGCTCTGTTATG+TGG + chr4.2:33683293-33683312 None:intergenic 50.0%
GCAAGGCAAGTGTGCATCAA+CGG + chr4.2:33685245-33685264 None:intergenic 50.0%
GCTTTGACAACGAAGCTTCG+AGG + chr4.2:33680257-33680276 None:intergenic 50.0%
GGACCGTAACAGAATGAAGG+GGG + chr4.2:33685084-33685103 None:intergenic 50.0%
GGCAACTAATGAGAAGAGCG+CGG - chr4.2:33682100-33682119 MS.gene058019:intron 50.0%
GGGAAAGAAGGATGGATCGT+GGG - chr4.2:33681682-33681701 MS.gene058019:intron 50.0%
GGGTTCGGCATTCTTGATGT+CGG - chr4.2:33684108-33684127 MS.gene058019:CDS 50.0%
GGTTCGGCATTCTTGATGTC+GGG - chr4.2:33684109-33684128 MS.gene058019:CDS 50.0%
GTAGTAGGAGGAGTAGTGGT+AGG - chr4.2:33681860-33681879 MS.gene058019:intron 50.0%
GTGGCAACTTCTACATGACC+TGG - chr4.2:33682660-33682679 MS.gene058019:intron 50.0%
TAACGGTCTGCATAGTGTGG+CGG + chr4.2:33680192-33680211 None:intergenic 50.0%
TATGGATACAGGACGAGGCT+TGG - chr4.2:33684530-33684549 MS.gene058019:intron 50.0%
TCAATCGATCTCCCGATGGA+AGG - chr4.2:33682618-33682637 MS.gene058019:intron 50.0%
TCATTGGCGGAGAGACAAAG+AGG + chr4.2:33685118-33685137 None:intergenic 50.0%
TCCCCAGAAGAAAACCTACC+AGG + chr4.2:33681549-33681568 None:intergenic 50.0%
TCCTGATGCTGGAGAGAGTT+GGG - chr4.2:33681729-33681748 MS.gene058019:intron 50.0%
TCGGATTTCGCCAACTGAGA+AGG + chr4.2:33680347-33680366 None:intergenic 50.0%
TCTGCGGATGGTATAGAACG+TGG + chr4.2:33681619-33681638 None:intergenic 50.0%
TGCTGAACTTCCTGGCGATA+TGG - chr4.2:33681768-33681787 MS.gene058019:intron 50.0%
! GGAAACGGATTTGTCCTGGT+AGG - chr4.2:33681532-33681551 MS.gene058019:intron 50.0%
! TAATGAGAAGAGCGCGGAGA+TGG - chr4.2:33682106-33682125 MS.gene058019:intron 50.0%
!! CATGAGGAACCTGGTTTGGT+TGG + chr4.2:33684756-33684775 None:intergenic 50.0%
!! TAGGTTTTCTTCTGGGGACG+AGG - chr4.2:33681551-33681570 MS.gene058019:intron 50.0%
ATGGGATGGAGAGCTGATGG+TGG - chr4.2:33683326-33683345 MS.gene058019:intron 55.0%
CAGCTCTCCATCCCATGTTC+TGG + chr4.2:33683322-33683341 None:intergenic 55.0%
CCTGTTCAAAGCCGAGGGTT+CGG - chr4.2:33684093-33684112 MS.gene058019:CDS 55.0%
CTCCTGATGCTGGAGAGAGT+TGG - chr4.2:33681728-33681747 MS.gene058019:intron 55.0%
GCGGAGATGGTGACTGATGA+AGG - chr4.2:33682119-33682138 MS.gene058019:intron 55.0%
GGAGTCTTGCTTCGCTACCT+TGG - chr4.2:33685533-33685552 MS.gene058019:CDS 55.0%
GGGACAAATGGCTGCAGATG+TGG + chr4.2:33685217-33685236 None:intergenic 55.0%
TCCCAACTCTCTCCAGCATC+AGG + chr4.2:33681733-33681752 None:intergenic 55.0%
TGACGCATCATGGCGCATTG+AGG + chr4.2:33683109-33683128 None:intergenic 55.0%
TTCTACATGACCTGGGAGCC+TGG - chr4.2:33682668-33682687 MS.gene058019:intron 55.0%
TTGGCGGAGAGACAAAGAGG+AGG + chr4.2:33685115-33685134 None:intergenic 55.0%
! CCAGGAAGTTCAGCACTGAG+CGG + chr4.2:33681763-33681782 None:intergenic 55.0%
! CTCTGGCTTCTTGTTCGTGG+AGG - chr4.2:33683350-33683369 MS.gene058019:intron 55.0%
! GGGGTATCTGATCCGTGAAG+TGG + chr4.2:33685065-33685084 None:intergenic 55.0%
! GGTCTCTGGCTTCTTGTTCG+TGG - chr4.2:33683347-33683366 MS.gene058019:intron 55.0%
GCTCTCGTCCCAACCAAACC+AGG - chr4.2:33684744-33684763 MS.gene058019:intron 60.0%
! CCGCTCAGTGCTGAACTTCC+TGG - chr4.2:33681760-33681779 MS.gene058019:intron 60.0%
! GGGGACGAGGCAAACCCTTT+TGG - chr4.2:33681564-33681583 MS.gene058019:intron 60.0%
!! CCGAACCCTCGGCTTTGAAC+AGG + chr4.2:33684096-33684115 None:intergenic 60.0%
!! GGAGAGCTGATGGTGGTCTC+TGG - chr4.2:33683333-33683352 MS.gene058019:intron 60.0%
CATGACCTGGGAGCCTGGTC+AGG - chr4.2:33682673-33682692 MS.gene058019:intron 65.0%
CAGGACGAGGCTTGGGCAGC+AGG - chr4.2:33684538-33684557 MS.gene058019:intron 70.0%
CCTCACCTGACCAGGCTCCC+AGG + chr4.2:33682681-33682700 None:intergenic 70.0%
CCTGGGAGCCTGGTCAGGTG+AGG - chr4.2:33682678-33682697 MS.gene058019:intron 70.0%
GACGAGGCTTGGGCAGCAGG+TGG - chr4.2:33684541-33684560 MS.gene058019:intron 70.0%
GCTTGGGCAGCAGGTGGCAG+TGG - chr4.2:33684547-33684566 MS.gene058019:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 33680155 33685559 33680155 ID=MS.gene058019
chr4.2 mRNA 33680155 33685559 33680155 ID=MS.gene058019.t1;Parent=MS.gene058019
chr4.2 exon 33685253 33685559 33685253 ID=MS.gene058019.t1.exon1;Parent=MS.gene058019.t1
chr4.2 CDS 33685253 33685559 33685253 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33683925 33684160 33683925 ID=MS.gene058019.t1.exon2;Parent=MS.gene058019.t1
chr4.2 CDS 33683925 33684160 33683925 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33683495 33683625 33683495 ID=MS.gene058019.t1.exon3;Parent=MS.gene058019.t1
chr4.2 CDS 33683495 33683625 33683495 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33683020 33683152 33683020 ID=MS.gene058019.t1.exon4;Parent=MS.gene058019.t1
chr4.2 CDS 33683020 33683152 33683020 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33682314 33682436 33682314 ID=MS.gene058019.t1.exon5;Parent=MS.gene058019.t1
chr4.2 CDS 33682314 33682436 33682314 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33681571 33681645 33681571 ID=MS.gene058019.t1.exon6;Parent=MS.gene058019.t1
chr4.2 CDS 33681571 33681645 33681571 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33681058 33681173 33681058 ID=MS.gene058019.t1.exon7;Parent=MS.gene058019.t1
chr4.2 CDS 33681058 33681173 33681058 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
chr4.2 exon 33680155 33680221 33680155 ID=MS.gene058019.t1.exon8;Parent=MS.gene058019.t1
chr4.2 CDS 33680155 33680221 33680155 ID=cds.MS.gene058019.t1;Parent=MS.gene058019.t1
Gene Sequence

>MS.gene058019

ATGGCGACTCTGCAATTCACATTCACAGACTCAACCGCCACACTATGCAGACCGTTATCTCAACTACCTTCTTCTAAATCCATAATTCATTCTCCGAGACCTCGAAGCTTCGTTGTCAAAGCTTCTCTCGAACCTTCCAGAACCAGAAGACAGTTCATTGCAGAAACCACTGCCATATCCGTGCTTGTTCCTTCTCAGTTGGCGAAATCCGAAGAAACTCTTTCTGAATGGGAAAGAGTTTATCTTCCTATTGATCCTGGTGTTGTTCTTCTTGATATCGCTTTTGTTCCTGAAGATCCTAACCATGGTCATAATCATTTCATTTTCTTGCTTTTCTTTGTGTTTTGTTTAACTTCATAATTGATTTTGCCTATATTGTGTGACTGGAATTGACTTATTTGAGCTTATGGAAATAATTTATGACATATCCATAAGTTTTCTATGATAGCTTATACGAAATTAGCATGGCTTTAATTTATCTTTTGTTATAGAAATAGTTTATCCATAAGCACTTATACATGATAAAACATATGCACTTATATGATAAGCGCCTATGCTATAAACACTTGATTAAACTGTTTATCCAAAGAGGGCATAGAAATGATAAAAACTAGTTTTGTGTTGGATTGAATAAAATGCACTAACTTTTGCTTTAAATTTGTTTCTAATGTAGAAGGATGCAAACATAAATTACTTCACTTTAAACTTAATTAAATTTTACAAAATTTGTTCACCAAAAAAAGAAATTACAAAATGTAGGTACTATTTGGATCAACACCTTAACTGAGCTCTTATAGTATAAGTGCTTATGTATACACTACCTGTTTTGATAAACAACTTATTTTGCAGTTTATGACATAAGTGCTTATCACATTAGCGCTTATCCTCTAAGTGCCTATGAATAGGCTATTTCTACAGTCAAAGATAAAAAAAAAGTCAAACTGCTTTCGAAAAGCTATAAGTTGTTTTCATAAGCTATGATGAATAGCTTATGAAAATAAGCCGAAAATAACTTATGAAAATATCATAAGCTGCTTTCATAAGTTCTCCCAAACAGTCTCACAAGTGTTTATGCTAGTAGTTATACTTAAATAAGTCAATCCAAACAGACCCATATTTCTATGAAAAAAATAAGATGAAGTCAAACTGTTTTTATAGGCTATCTTGGAGAGCTTATTGAAATAAGGTGAAAATATCTTATGGACATGTCGTAAGTTGGTATTCTTAAGCTCTTCGAAACAGTCTTACAAATGCTTATGTCGTTAGATAAGCTCAAATAAGCCAATTTGAACAAACCATATTTCTATTACAAATCATGTTTATGAAATGCTTGCGTAATCAGTCTTGTTTTTGTTGTTTGAATTTGTGTTGTAAAATGGAAACGGATTTGTCCTGGTAGGTTTTCTTCTGGGGACGAGGCAAACCCTTTTGGAGACTAAAGATGGTGGAAGAACTTGGGCTCCACGTTCTATACCATCCGCAGAAGATGAAGATTTTAACTATAGGTTTAATTCTATCAGCTTCAAAGGGAAAGAAGGATGGATCGTGGGAAAACCTGCAATTCTATTGTACACTCCTGATGCTGGAGAGAGTTGGGAAAGGATACCGCTCAGTGCTGAACTTCCTGGCGATATGGTATACATGCTTCATTCAAATCCAATGCTTGTTTCTACTGCTACTACAAATACTATAAATATTATTATTAGTAGTAGGAGGAGTAGTGGTAGGCTGATAGCAGTAGTTTTTTTTTAAAAGACATAGCTTTTGCGTTGAGTTGGAAAATTTACACAAGTTTTTGCATTGCTTTCAGATTAAAAATCCAAACATTAATCATTTCAACTGTACAAAAGTAACTGTTGGAACATATGTGACAACATTAACTCTACTCAAAAAGCATGTTCATCAAATGCTCACATAAGTTGTTGAATGTGCAGGTATACATAAAGGCAACTAATGAGAAGAGCGCGGAGATGGTGACTGATGAAGGTGCAATATATGTTACCTCAAACAGAGGATACAATTGGAAGGCTGCTGTTCAGGAATCAGTGTCGGCTACTCTTAATAGGTGAGTTTCTGAGAGACAAAAAACCAAACTTCGTTTGATGTAACTGTCTGAGAATGCATAATGTATATGTATGGATGGATCCATAATGCCATTTAAGGAATGTAACTCTTTCAAGCTAGGAAGTGAACTAAGCTAATATACTCAAGAGTAGCAATATGGAAAGTCGTATTAATACATTTGGAAGTAGGGTGGTCTTTTATGATGCTATTAATGAACAAATTCAACTTCTTATTTATCTGTTTCATAATCTCTTTCAACGTGCTATCTTTCATATTTTCTACACTGCAAATATTTTATTTCGGTTTTATACATGACATTTATCTAGCTATGTTGCCTCTTCAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGCTATTACACTGGAACTTTCAATACTGTCAATCGATCTCCCGATGGAAGGTATGTTGCAGTCTCAAGTCGTGGCAACTTCTACATGACCTGGGAGCCTGGTCAGGTGAGGCTTTTACTTAGTGATGGCTTTTGCTTTTGCTTCTATTTGCTTGGTAGTTTTACTTTTGGCATGCCATGTGGTTTATCTAATTGTACAGGAATATTGTTACACTTACATCATTGTTGCACGTTGAAACAAAATAGTTTGATACATTAAAAATATTCTTAGGAGTATTAACACCGAATCTTCTTTGATTAGAACTCAAGATGTACTAAATTTTAGCACGATGCATGCCAATAATCTTCTTGTACATCCACTACTTTTAAGAAAACATTTCGGTTTCTTCTTTGATTGATTTCATCCAGGTGATATCATTGATAGGATAGACCTCCTGAAGAAAAAATTCTGCTAACATACAAAATTATAAAAGATCCTCTCTTTTGCTTTTTGCACTGATTAAATCTGTACTTTCTTCCTCAATGCGCCATGATGCGTCAGCTCATCCTTGTAATATATGTCTTAATGTCTCGAATAGTTGGCTTGGGTAGATTATGAGTTTTCCATTTAGCCATAGATATCATTTTGGTTGGTGTTTCTTCTGCACTAATAGTAATAGGGCTTAATTACATGTTTATTTCATTTTCAGGCATACTGGCAGCCACATAACAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTCTGGCTTCTTGTTCGTGGAGGTAGTCTTTTTCTCAGCAAAGGCACAGGGGTAATTAATTCCAAGAATATCATTCTAGTGTACCCATATGATACTAGTGGCCTTCCTTTTCACTCATTCCCTTCTGGATAGATTTCTTTTTTATAAAGTTTTCCTTTTCACCCATTTCAAAGTCTTTCTGGTTATACTTTTTAGTTATGTCTTTCATTCAGTAAAAGTTTTGTCACACTTTTCACGTGGATATTTCCATCTCTATCTCTATCTTGCACATTCACACACTACTTTATTTACTCTCCTTATCTTGTTTGGTAATAGGTCAACTTCTGTCTTTGTTCAAACGTCTTTCCTTATTGCATTCTCTTCCCTTGTGCTGTCCACTTTTCATTTTGGTTTATTTGCCTCTACCGAATGTATTGTATTTATCTACATTCACGATTCAACTGCCCCATAATGTTTTACATCCTGTAGAAGTAGGGAGAAGTGAAAAGGGATTAAAAGGGAACCCCTTTCTTAGAAAATGTACAAGTGCATAACCCTTTCACTTCTATCATTATTTTACCACATATATAATAAATCTCAAAATTGATCCATTAAATTCTTTTTGGTCAATCATAATTGACTTCATATACTTTTCTTGCCACTGATTACATCCTCAATTTTATTTTATTTTCAAATTTAGTTGCATAATTTTGAGAACAGAAGGTATTTCATTGTTGCAGATAACTGAAGAGTTTGAGGAAATTCCTGTTCAAAGCCGAGGGTTCGGCATTCTTGATGTCGGGTATCGTTCAACGGTAAAATTTTACTGCATTCAGAGGATTGCTTTATTAAGGAAAATGTTGTTTTGCTGGAAAAGTTTAACATAGAAGTTATACAAATGAATTTGATTGAGTATATTTAAGTGGCGGTGTGTAGTTACTACAAAATAACTTTTACATAAACACCTCACTCATGTATTATTATATATTTCCCCTTTTCGTATTAACATTCATAACAATTTCTTCTTGCTAAATTACATTGCTGCTTCGTTGAATCAACAATTTCTTGCTTGTATCAGTCTTAAAAAAAACATTGGCGATATGACTAATGCCTCTGCAGTTCTTTCAATACGACTATTATTACTTTCAAATTTTGAGAATAATGTTGAAAACATTTTCTTTATATACAAAATTTGCAAAATTATGGATACAGGACGAGGCTTGGGCAGCAGGTGGCAGTGGTATTCTCTTGAGAACTAATAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTAAAGTGAGTATAAGTATTACTAGACTCTGCTTTTATGTAATTGTACTTAATTATTAGTGTACTCTTTAAAACCTCCAATTTACTTGTAGAGCTCTCGTCCCAACCAAACCAGGTTCCTCATGTTGTTGATATATTCTCCACTTCTTTTGTTCCATTGGTCTTTGTATTACTCCTTTCCTATTCTCAAGAGATGCTAATAGAACCAACCGATAATATTTTGTAGAATATAATAGTGTTTATTTGTGTAAAACTGGAGGAGTTAGCATCTGTATCATGGAAATAACTATGGACTAAAATATAAAATGGATGGAGATGATCTACTTGGAGAAATGAAAACAGTCGGTCACCTTAGTAAGAGTACCTCCTTTAGTGAGATAGGGATTATTCTACACCCAGCTACCAAAATTTCCACTTCACGGATCAGATACCCCCTTCATTCTGTTACGGTCCTCTAAATACCTCCTCTTTGTCTCTCCGCCAATGATTTCCTCACCTTTCTCTAATTCTAACCTGCTAGCTGTCCATGTTGTTACTCCTTCCTGCTCCTTTTTCTCTTTCTTCCACATCTGCAGCCATTTGTCCCTTTCTCCGTTGATGCACACTTGCCTTGCTCTTTAGACCCAATACCACTACTTTATTTTCCTTTATTCCCCCTCCTATAAACATGCACCATAGGCCTATCAGATGCAATTATCAGAAATGATACTTTATCCGTTATATTGTTAGCACAGGATGAAAAAATTTCCACACATGAAAAATAAATATAGGAGATTCTGAAGGTCAGAGTTTGTAGAACTTTTATTGGTGATAAATCTTGTAAATGGTTTCACTTGCTGCAGGTTCATTGATGACAAGAAGGGATTTGTATTGGGAAATGATGGAGTCTTGCTTCGCTACCTTGGATAG
Protein sequence

>MS.gene058019.t1

MATLQFTFTDSTATLCRPLSQLPSSKSIIHSPRPRSFVVKASLEPSRTRRQFIAETTAISVLVPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPEDPNHGFLLGTRQTLLETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIPLSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADGGLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG