Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24539.t1 | XP_003589035.2 | 86.7 | 264 | 31 | 3 | 1 | 262 | 1 | 262 | 2.50E-108 | 401.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24539.t1 | G7IBA2 | 86.7 | 264 | 31 | 3 | 1 | 262 | 1 | 262 | 1.8e-108 | 401.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049580 | MS.gene24539 | 0.811233 | 7.76E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene24539 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene24539 | 0.86677 | 2.24E-65 | -1.69E-46 |
| MS.gene050303 | MS.gene24539 | 0.819766 | 9.78E-53 | -1.69E-46 |
| MS.gene051063 | MS.gene24539 | 0.825519 | 4.48E-54 | -1.69E-46 |
| MS.gene051245 | MS.gene24539 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene051349 | MS.gene24539 | 0.80029 | 1.55E-48 | -1.69E-46 |
| MS.gene051451 | MS.gene24539 | 0.810637 | 1.04E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene24539 | 0.967186 | 6.23E-127 | -1.69E-46 |
| MS.gene051746 | MS.gene24539 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene24539 | 0.819472 | 1.14E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene24539 | 0.839902 | 1.20E-57 | -1.69E-46 |
| MS.gene052176 | MS.gene24539 | 0.828206 | 1.02E-54 | -1.69E-46 |
| MS.gene052286 | MS.gene24539 | 0.845654 | 3.55E-59 | -1.69E-46 |
| MS.gene052302 | MS.gene24539 | 0.858733 | 6.73E-63 | -1.69E-46 |
| MS.gene052309 | MS.gene24539 | -0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene052376 | MS.gene24539 | 0.852508 | 4.41E-61 | -1.69E-46 |
| MS.gene052856 | MS.gene24539 | 0.803579 | 3.26E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene24539 | 0.82095 | 5.23E-53 | -1.69E-46 |
| MS.gene053294 | MS.gene24539 | 0.811327 | 7.40E-51 | -1.69E-46 |
| MS.gene055174 | MS.gene24539 | 0.809175 | 2.15E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene24539 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene24539 | 0.815704 | 8.07E-52 | -1.69E-46 |
| MS.gene056069 | MS.gene24539 | -0.800979 | 1.12E-48 | -1.69E-46 |
| MS.gene056091 | MS.gene24539 | 0.816519 | 5.30E-52 | -1.69E-46 |
| MS.gene056601 | MS.gene24539 | 0.80469 | 1.91E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene24539 | 0.850709 | 1.42E-60 | -1.69E-46 |
| MS.gene057057 | MS.gene24539 | 0.811973 | 5.36E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene24539 | 0.871159 | 8.45E-67 | -1.69E-46 |
| MS.gene057140 | MS.gene24539 | 0.817359 | 3.44E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene24539 | 0.847858 | 8.86E-60 | -1.69E-46 |
| MS.gene057555 | MS.gene24539 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene24539 | 0.827647 | 1.39E-54 | -1.69E-46 |
| MS.gene05795 | MS.gene24539 | 0.827173 | 1.81E-54 | -1.69E-46 |
| MS.gene058055 | MS.gene24539 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene24539 | 0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene058200 | MS.gene24539 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene24539 | 0.857731 | 1.34E-62 | -1.69E-46 |
| MS.gene058906 | MS.gene24539 | 0.845044 | 5.19E-59 | -1.69E-46 |
| MS.gene05954 | MS.gene24539 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene24539 | 0.848606 | 5.51E-60 | -1.69E-46 |
| MS.gene060165 | MS.gene24539 | 0.835634 | 1.50E-56 | -1.69E-46 |
| MS.gene060297 | MS.gene24539 | 0.820574 | 6.39E-53 | -1.69E-46 |
| MS.gene060586 | MS.gene24539 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene060619 | MS.gene24539 | 0.836553 | 8.75E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24539.t1 | MTR_1g016630 | 88.636 | 264 | 26 | 3 | 1 | 262 | 1 | 262 | 6.46e-153 | 427 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24539.t1 | AT3G20430 | 49.627 | 268 | 119 | 7 | 1 | 260 | 1 | 260 | 8.48e-70 | 216 |
Find 45 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGATGGTAAGCGATTT+CGG | 0.295356 | 1.2:+5966033 | MS.gene24539:CDS |
| ATTATCTCTTTGTAAGCATT+TGG | 0.296419 | 1.2:-5966098 | None:intergenic |
| TAATAATACAGAAGCAATTC+AGG | 0.298572 | 1.2:+5966872 | MS.gene24539:intron |
| CGGCGACACCGTTTCGATTA+TGG | 0.307561 | 1.2:-5962570 | None:intergenic |
| AAGAGAAAGAGAAAGGCTTT+AGG | 0.415930 | 1.2:+5962685 | MS.gene24539:CDS |
| ATTCTTAATCTGTCATGAAC+AGG | 0.445504 | 1.2:-5967060 | None:intergenic |
| TGATGTTGAAGAGGGTGAAT+TGG | 0.447652 | 1.2:+5962528 | MS.gene24539:CDS |
| AGATCATCATCATAGGAAAC+AGG | 0.457123 | 1.2:-5967084 | None:intergenic |
| ATACAGCTGTAGGTTGCCTT+GGG | 0.458577 | 1.2:+5963071 | MS.gene24539:CDS |
| TCCTATGATGATGATCTGCT+TGG | 0.462050 | 1.2:+5967090 | MS.gene24539:CDS |
| TATACAGCTGTAGGTTGCCT+TGG | 0.468657 | 1.2:+5963070 | MS.gene24539:CDS |
| AAGAAACCTGTCAATGTTGA+TGG | 0.484273 | 1.2:-5962722 | None:intergenic |
| ATGCACCCATCAACATTGAC+AGG | 0.486157 | 1.2:+5962716 | MS.gene24539:CDS |
| GCTTACCATCAGCAGTCTGC+TGG | 0.494811 | 1.2:-5966025 | None:intergenic |
| TGGAATTTGGGCATGGAGGG+TGG | 0.498961 | 1.2:+5962451 | None:intergenic |
| AGCAGTCTGCTGGCCTCCAC+AGG | 0.505033 | 1.2:-5966015 | None:intergenic |
| GTTTGGAATTTGGGCATGGA+GGG | 0.508864 | 1.2:+5962448 | None:intergenic |
| GATGGTAAGCGATTTCGGAC+AGG | 0.509601 | 1.2:+5966038 | MS.gene24539:CDS |
| TCCAAGCAGATCATCATCAT+AGG | 0.511312 | 1.2:-5967091 | None:intergenic |
| CAAGATCAAGATAAACCGCC+AGG | 0.529708 | 1.2:+5967018 | MS.gene24539:CDS |
| GAGAAAGGCTTTAGGAGGAT+CGG | 0.532126 | 1.2:+5962693 | MS.gene24539:CDS |
| ATGGATGCCTGCTTAAAACT+TGG | 0.535810 | 1.2:-5966898 | None:intergenic |
| ATGGTAAGCGATTTCGGACA+GGG | 0.567855 | 1.2:+5966039 | MS.gene24539:CDS |
| GAACAAGACCATAATCGAAA+CGG | 0.575699 | 1.2:+5962562 | MS.gene24539:CDS |
| CGCTCAACGCAGAAATCCCA+AGG | 0.577857 | 1.2:-5963087 | None:intergenic |
| AGAAAGAGAAAGGCTTTAGG+AGG | 0.581783 | 1.2:+5962688 | MS.gene24539:CDS |
| TGCATTTGCGATGCGCAAGT+AGG | 0.587168 | 1.2:-5966997 | None:intergenic |
| AAACGGTGTCGCCGCCACAC+AGG | 0.597293 | 1.2:+5962579 | MS.gene24539:CDS |
| AGAAGAAGACGATGTTGAGA+TGG | 0.597325 | 1.2:+5962504 | MS.gene24539:CDS |
| AGAGGAGGATTCTTCTCAAG+AGG | 0.611513 | 1.2:+5966927 | MS.gene24539:CDS |
| GGTTTGTGATAGAGACATGT+CGG | 0.623578 | 1.2:+5963017 | MS.gene24539:intron |
| GAGATGGTTGATGTTGAAGA+GGG | 0.630707 | 1.2:+5962520 | MS.gene24539:CDS |
| GGAGGCCAGCAGACTGCTGA+TGG | 0.631237 | 1.2:+5966020 | MS.gene24539:CDS |
| TGAGATGGTTGATGTTGAAG+AGG | 0.639578 | 1.2:+5962519 | MS.gene24539:CDS |
| GGTAAGCGATTTCGGACAGG+GGG | 0.641482 | 1.2:+5966041 | MS.gene24539:CDS |
| AAGTAGGATTGTCAGAAACA+TGG | 0.643430 | 1.2:-5966981 | None:intergenic |
| AGAAACCTGTCAATGTTGAT+GGG | 0.647666 | 1.2:-5962721 | None:intergenic |
| GTTGAGCGATATCGTCAAAG+AGG | 0.648067 | 1.2:+5963102 | MS.gene24539:CDS |
| TACATGGTATATACAGCTGT+AGG | 0.664112 | 1.2:+5963061 | MS.gene24539:CDS |
| GACGCAATACAGTCCTGTGG+AGG | 0.666430 | 1.2:+5966002 | MS.gene24539:CDS |
| TGCGCACTAGAAAATGTACA+AGG | 0.667493 | 1.2:-5966952 | None:intergenic |
| TGGTAAGCGATTTCGGACAG+GGG | 0.706451 | 1.2:+5966040 | MS.gene24539:CDS |
| GTAGACGCAATACAGTCCTG+TGG | 0.714054 | 1.2:+5965999 | MS.gene24539:CDS |
| GAGATTATGATCCTGTGTGG+CGG | 0.728683 | 1.2:-5962590 | None:intergenic |
| AATGAGATTATGATCCTGTG+TGG | 0.779299 | 1.2:-5962593 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTGTATAAAATTAAATAT+TGG | - | chr1.2:5965292-5965311 | None:intergenic | 10.0% |
| !! | GTATTATCAATATAATTATT+CGG | + | chr1.2:5964278-5964297 | MS.gene24539:intron | 10.0% |
| !! | TAAATAAATCATGAAATATA+AGG | - | chr1.2:5964160-5964179 | None:intergenic | 10.0% |
| !! | TATTTCATGATTTATTTAAT+AGG | + | chr1.2:5964162-5964181 | MS.gene24539:intron | 10.0% |
| !!! | TTTAACATTTTAATTTTTTC+TGG | + | chr1.2:5965457-5965476 | MS.gene24539:intron | 10.0% |
| !! | AATAAAGGGAAATTATTAAA+AGG | - | chr1.2:5965010-5965029 | None:intergenic | 15.0% |
| !! | GATATCTTATTGAAATAATA+AGG | - | chr1.2:5964338-5964357 | None:intergenic | 15.0% |
| !! | GTTAAATTCTTATAAAACAA+AGG | - | chr1.2:5965443-5965462 | None:intergenic | 15.0% |
| !! | TAAAATTAATACCAGAAAAA+TGG | + | chr1.2:5966583-5966602 | MS.gene24539:intron | 15.0% |
| !!! | AGAGTATTTGAATTATATTT+TGG | + | chr1.2:5964117-5964136 | MS.gene24539:intron | 15.0% |
| !!! | GAGTATTTGAATTATATTTT+GGG | + | chr1.2:5964118-5964137 | MS.gene24539:intron | 15.0% |
| !!! | TATTTAGGAAAATTCAATTT+TGG | - | chr1.2:5965367-5965386 | None:intergenic | 15.0% |
| !! | AAATAATATTTGAATGACCT+TGG | - | chr1.2:5966803-5966822 | None:intergenic | 20.0% |
| !! | AATAATTTCCCTTTATTGAT+GGG | + | chr1.2:5965013-5965032 | MS.gene24539:intron | 20.0% |
| !! | AATTTCATTACAGTTATAGA+AGG | + | chr1.2:5965416-5965435 | MS.gene24539:intron | 20.0% |
| !! | AGAATTACAAAATCAGTATT+AGG | - | chr1.2:5963650-5963669 | None:intergenic | 20.0% |
| !! | AGAGTAAAGTGAAAAAAAAA+AGG | - | chr1.2:5966394-5966413 | None:intergenic | 20.0% |
| !! | AGAGTAATGATTAAATGTAA+TGG | - | chr1.2:5962930-5962949 | None:intergenic | 20.0% |
| !! | ATCTAAGGAAAAAAACAATA+TGG | - | chr1.2:5964586-5964605 | None:intergenic | 20.0% |
| !! | ATTATACTCTTCATAAATCA+TGG | + | chr1.2:5965819-5965838 | MS.gene24539:intron | 20.0% |
| !! | CCAAAATTCATAACAAAAAA+TGG | - | chr1.2:5965778-5965797 | None:intergenic | 20.0% |
| !! | TAATAATTTCCCTTTATTGA+TGG | + | chr1.2:5965012-5965031 | MS.gene24539:intron | 20.0% |
| !! | TATATGAGAGAAAAATAAAG+TGG | - | chr1.2:5965321-5965340 | None:intergenic | 20.0% |
| !! | TATTGAAATAATAAGGACTT+GGG | - | chr1.2:5964331-5964350 | None:intergenic | 20.0% |
| !! | TCATGAAATATAAGGAAATA+TGG | - | chr1.2:5964152-5964171 | None:intergenic | 20.0% |
| !! | TCTAAGGAAAAAAACAATAT+GGG | - | chr1.2:5964585-5964604 | None:intergenic | 20.0% |
| !! | TCTTCAATTATTAAGATATC+TGG | - | chr1.2:5963351-5963370 | None:intergenic | 20.0% |
| !! | TGTATTTACTTATGTCAAAA+CGG | - | chr1.2:5962962-5962981 | None:intergenic | 20.0% |
| !! | TTATTGAAATAATAAGGACT+TGG | - | chr1.2:5964332-5964351 | None:intergenic | 20.0% |
| !! | TTCATTTGATAAAACAGTTT+AGG | - | chr1.2:5963322-5963341 | None:intergenic | 20.0% |
| !!! | AACTGTTTTATCAAATGAAA+AGG | + | chr1.2:5963323-5963342 | MS.gene24539:intron | 20.0% |
| !!! | CCATTTTTTGTTATGAATTT+TGG | + | chr1.2:5965775-5965794 | MS.gene24539:intron | 20.0% |
| !!! | GTTGAAATCTAAAATATTGT+TGG | + | chr1.2:5965611-5965630 | MS.gene24539:intron | 20.0% |
| !!! | TTAAGATTTTAGTGTAAACA+TGG | + | chr1.2:5965540-5965559 | MS.gene24539:intron | 20.0% |
| !!! | TTGGATTGATAATTTTTACT+AGG | - | chr1.2:5966357-5966376 | None:intergenic | 20.0% |
| !!! | TTGTTTTGAACTTTTTTGTT+TGG | + | chr1.2:5964428-5964447 | MS.gene24539:intron | 20.0% |
| !!! | TTTGAATTATATTTTGGGTT+TGG | + | chr1.2:5964123-5964142 | MS.gene24539:intron | 20.0% |
| !!! | TTTTTTTCACTTTACTCTAA+TGG | + | chr1.2:5966396-5966415 | MS.gene24539:intron | 20.0% |
| ! | AAGTATCTGTTGAAATGATA+AGG | - | chr1.2:5964893-5964912 | None:intergenic | 25.0% |
| ! | AATAGTAAAGGAACAATTGA+TGG | + | chr1.2:5965510-5965529 | MS.gene24539:intron | 25.0% |
| ! | AGTAATAGATAAGCATAATC+AGG | - | chr1.2:5965130-5965149 | None:intergenic | 25.0% |
| ! | ATAACACATTCAGCATTATT+AGG | - | chr1.2:5962768-5962787 | None:intergenic | 25.0% |
| ! | ATACAAGTAAAAGAACACAA+AGG | - | chr1.2:5963826-5963845 | None:intergenic | 25.0% |
| ! | ATTATCAAACCAGTGTAAAA+AGG | - | chr1.2:5963505-5963524 | None:intergenic | 25.0% |
| ! | ATTATCTCTTTGTAAGCATT+TGG | - | chr1.2:5966101-5966120 | None:intergenic | 25.0% |
| ! | CAATATAATTATTCGGAGTT+TGG | + | chr1.2:5964285-5964304 | MS.gene24539:intron | 25.0% |
| ! | CTAAGAACTATTGATATTTG+GGG | + | chr1.2:5963559-5963578 | MS.gene24539:intron | 25.0% |
| ! | GAAAGAGAAAAAATCATACA+TGG | + | chr1.2:5963045-5963064 | MS.gene24539:CDS | 25.0% |
| ! | GATTATATTTAAGAGCAACT+GGG | - | chr1.2:5966764-5966783 | None:intergenic | 25.0% |
| ! | GATTATGAAATCAGTTAAGA+AGG | - | chr1.2:5963797-5963816 | None:intergenic | 25.0% |
| ! | GCTAAGAACTATTGATATTT+GGG | + | chr1.2:5963558-5963577 | MS.gene24539:intron | 25.0% |
| ! | GTACACTGTAAAAAAATCTA+AGG | - | chr1.2:5964601-5964620 | None:intergenic | 25.0% |
| ! | TAAAAACAAGAGAAAGAGAA+AGG | + | chr1.2:5962678-5962697 | MS.gene24539:CDS | 25.0% |
| ! | TAACACATTCAGCATTATTA+GGG | - | chr1.2:5962767-5962786 | None:intergenic | 25.0% |
| ! | TAACTGTAATGAAATTCAGA+TGG | - | chr1.2:5965412-5965431 | None:intergenic | 25.0% |
| ! | TAAGAACTATTGATATTTGG+GGG | + | chr1.2:5963560-5963579 | MS.gene24539:intron | 25.0% |
| ! | TAATAATACAGAAGCAATTC+AGG | + | chr1.2:5966872-5966891 | MS.gene24539:intron | 25.0% |
| ! | TAATTAAGTGTTAAACTCAC+AGG | + | chr1.2:5965977-5965996 | MS.gene24539:intron | 25.0% |
| ! | TATCAAACAAAAAATCTTCC+CGG | - | chr1.2:5966647-5966666 | None:intergenic | 25.0% |
| ! | TCAAAGTTTAAACAGAGAAT+TGG | - | chr1.2:5965250-5965269 | None:intergenic | 25.0% |
| ! | TGATTATATTTAAGAGCAAC+TGG | - | chr1.2:5966765-5966784 | None:intergenic | 25.0% |
| ! | TGATTCTCCTACATATATTA+GGG | - | chr1.2:5965576-5965595 | None:intergenic | 25.0% |
| ! | TGCTAAGAACTATTGATATT+TGG | + | chr1.2:5963557-5963576 | MS.gene24539:intron | 25.0% |
| ! | TGTTTAAGCAGTAAAAAGTA+AGG | - | chr1.2:5966159-5966178 | None:intergenic | 25.0% |
| ! | TTGATTCTCCTACATATATT+AGG | - | chr1.2:5965577-5965596 | None:intergenic | 25.0% |
| !! | ATCTAGTAGGAGTATAAATA+AGG | + | chr1.2:5964197-5964216 | MS.gene24539:intron | 25.0% |
| !! | ATGAAAGTATATTGTTGAGT+AGG | + | chr1.2:5965486-5965505 | MS.gene24539:intron | 25.0% |
| !! | CATTATTAGGGTTTGAAATT+GGG | - | chr1.2:5962755-5962774 | None:intergenic | 25.0% |
| !! | CATTGATTAATAATCAACCA+AGG | + | chr1.2:5966783-5966802 | MS.gene24539:intron | 25.0% |
| !! | GATTTATGAAGAGTATAATG+TGG | - | chr1.2:5965818-5965837 | None:intergenic | 25.0% |
| !! | TAAGAATGATCGATATTTTG+TGG | + | chr1.2:5963861-5963880 | MS.gene24539:intron | 25.0% |
| !! | TACAAAGTTGTTTCAAATTG+TGG | - | chr1.2:5963253-5963272 | None:intergenic | 25.0% |
| !! | TCTAGTAGGAGTATAAATAA+GGG | + | chr1.2:5964198-5964217 | MS.gene24539:intron | 25.0% |
| !! | TCTTTGGGTTTAATTATGTT+TGG | + | chr1.2:5965910-5965929 | MS.gene24539:intron | 25.0% |
| !! | TGATTAAATGTAATGGAACA+AGG | - | chr1.2:5962923-5962942 | None:intergenic | 25.0% |
| !! | TGTTGAAATGATAAGGTTTT+AGG | - | chr1.2:5964886-5964905 | None:intergenic | 25.0% |
| !! | TTGTTTTCAGACATTCTAAA+TGG | - | chr1.2:5963288-5963307 | None:intergenic | 25.0% |
| !! | TTTGTGTTCTTTTACTTGTA+TGG | + | chr1.2:5963825-5963844 | MS.gene24539:intron | 25.0% |
| !!! | AATTCTTCTTATTTCTATCG+AGG | + | chr1.2:5963671-5963690 | MS.gene24539:intron | 25.0% |
| !!! | AGACCAATTACTCTAAAATT+TGG | + | chr1.2:5964398-5964417 | MS.gene24539:intron | 25.0% |
| !!! | ATCCCAAATTTTAGAGTAAT+TGG | - | chr1.2:5964404-5964423 | None:intergenic | 25.0% |
| !!! | ATGAACAATTTCCATTTTTC+TGG | - | chr1.2:5966597-5966616 | None:intergenic | 25.0% |
| !!! | ATGAATTATGTGCTTTTTTC+AGG | + | chr1.2:5962996-5963015 | MS.gene24539:intron | 25.0% |
| !!! | CTTTACTCTAATGGATTTTA+AGG | + | chr1.2:5966405-5966424 | MS.gene24539:intron | 25.0% |
| !!! | GACCAATTACTCTAAAATTT+GGG | + | chr1.2:5964399-5964418 | MS.gene24539:intron | 25.0% |
| AAAACAACTGAACTTGTCTT+TGG | + | chr1.2:5965894-5965913 | MS.gene24539:intron | 30.0% | |
| AAAACCCAACAACATTTGTA+AGG | - | chr1.2:5964028-5964047 | None:intergenic | 30.0% | |
| AAAACTGGACAAAATATAGC+TGG | + | chr1.2:5966467-5966486 | MS.gene24539:intron | 30.0% | |
| AAACAACTGAACTTGTCTTT+GGG | + | chr1.2:5965895-5965914 | MS.gene24539:intron | 30.0% | |
| AACACATCAGAAACTGTAAA+TGG | - | chr1.2:5965176-5965195 | None:intergenic | 30.0% | |
| AAGAATGTGAGACCAATTAT+GGG | - | chr1.2:5964470-5964489 | None:intergenic | 30.0% | |
| AATAATAAGGACTTGGGAAA+AGG | - | chr1.2:5964325-5964344 | None:intergenic | 30.0% | |
| AGATGAAAATCAACATTGCA+AGG | - | chr1.2:5963146-5963165 | None:intergenic | 30.0% | |
| AGCAAGTACAAAATTCCTAA+AGG | - | chr1.2:5965666-5965685 | None:intergenic | 30.0% | |
| AGTTTAAACAGAGAATTGGA+AGG | - | chr1.2:5965246-5965265 | None:intergenic | 30.0% | |
| ATACTCTTCATAAATCATGG+TGG | + | chr1.2:5965822-5965841 | MS.gene24539:intron | 30.0% | |
| ATTCTTAATCTGTCATGAAC+AGG | - | chr1.2:5967063-5967082 | None:intergenic | 30.0% | |
| ATTTGTCCAATGAACGTATT+AGG | + | chr1.2:5965726-5965745 | MS.gene24539:intron | 30.0% | |
| CAAAACCTCTCAGTAAAAAT+CGG | + | chr1.2:5962650-5962669 | MS.gene24539:CDS | 30.0% | |
| CGATAAGAATGATACGTATT+TGG | + | chr1.2:5963701-5963720 | MS.gene24539:intron | 30.0% | |
| CTAATACCTAATACGTTCAT+TGG | - | chr1.2:5965735-5965754 | None:intergenic | 30.0% | |
| CTGTAAATGGTTGTATTGTA+TGG | - | chr1.2:5965163-5965182 | None:intergenic | 30.0% | |
| GCAAGTACAAAATTCCTAAA+GGG | - | chr1.2:5965665-5965684 | None:intergenic | 30.0% | |
| TAAGAATGATACGTATTTGG+TGG | + | chr1.2:5963704-5963723 | MS.gene24539:intron | 30.0% | |
| TAAGAATGTGAGACCAATTA+TGG | - | chr1.2:5964471-5964490 | None:intergenic | 30.0% | |
| TCATTTCAACAGATACTTTG+CGG | + | chr1.2:5964895-5964914 | MS.gene24539:intron | 30.0% | |
| TGTTGAGTAGGTAATAGTAA+AGG | + | chr1.2:5965498-5965517 | MS.gene24539:intron | 30.0% | |
| TGTTTAAACTTTGATGTTCC+TGG | + | chr1.2:5965256-5965275 | MS.gene24539:intron | 30.0% | |
| TTAGGAGAATAGACATGTAT+TGG | - | chr1.2:5963632-5963651 | None:intergenic | 30.0% | |
| TTGTATTGTATGGTCTTCTA+GGG | - | chr1.2:5965153-5965172 | None:intergenic | 30.0% | |
| TTTCTCTCATATAAACAGAG+CGG | + | chr1.2:5965328-5965347 | MS.gene24539:intron | 30.0% | |
| ! | AATGCAACACACATTTTACT+GGG | - | chr1.2:5964970-5964989 | None:intergenic | 30.0% |
| ! | AGAATCAAACTGAAGGTTTT+TGG | + | chr1.2:5965589-5965608 | MS.gene24539:intron | 30.0% |
| ! | ATCTAAAATATTGTTGGACG+AGG | + | chr1.2:5965617-5965636 | MS.gene24539:intron | 30.0% |
| ! | GCATTATTAGGGTTTGAAAT+TGG | - | chr1.2:5962756-5962775 | None:intergenic | 30.0% |
| ! | GCTACTATCTTTTACGAAAA+AGG | - | chr1.2:5966716-5966735 | None:intergenic | 30.0% |
| ! | GTTTGATAATTCTGAATCCT+CGG | + | chr1.2:5963515-5963534 | MS.gene24539:intron | 30.0% |
| ! | TCTAAAATATTGTTGGACGA+GGG | + | chr1.2:5965618-5965637 | MS.gene24539:intron | 30.0% |
| ! | TGATTTTCATCTTGAATGCA+TGG | + | chr1.2:5963154-5963173 | MS.gene24539:intron | 30.0% |
| ! | TTAAGCATACAACAGTCTTT+TGG | + | chr1.2:5966524-5966543 | MS.gene24539:intron | 30.0% |
| ! | TTCATGACTTTTGAATTAGC+AGG | + | chr1.2:5966612-5966631 | MS.gene24539:intron | 30.0% |
| !! | CTGTTTTCAGCTTATTTTCA+GGG | + | chr1.2:5962887-5962906 | MS.gene24539:intron | 30.0% |
| !! | GATTTTAGTGTAAACATGGT+AGG | + | chr1.2:5965544-5965563 | MS.gene24539:intron | 30.0% |
| !!! | TCAATTTTGGCTTACTTTGT+TGG | - | chr1.2:5965354-5965373 | None:intergenic | 30.0% |
| !!! | TTGTTGGGTTTTTTCATAGA+TGG | + | chr1.2:5964036-5964055 | MS.gene24539:intron | 30.0% |
| AAAACAGGATGCATACGTAA+TGG | - | chr1.2:5963469-5963488 | None:intergenic | 35.0% | |
| AAAGGGTGGCTTACAATATT+AGG | - | chr1.2:5965648-5965667 | None:intergenic | 35.0% | |
| AAATTTGTGACGTGCCAAAT+CGG | - | chr1.2:5965954-5965973 | None:intergenic | 35.0% | |
| AAGAAACCTGTCAATGTTGA+TGG | - | chr1.2:5962725-5962744 | None:intergenic | 35.0% | |
| AAGAGAAAGAGAAAGGCTTT+AGG | + | chr1.2:5962685-5962704 | MS.gene24539:CDS | 35.0% | |
| AAGTAGGATTGTCAGAAACA+TGG | - | chr1.2:5966984-5967003 | None:intergenic | 35.0% | |
| AATATTGTAAGCCACCCTTT+AGG | + | chr1.2:5965648-5965667 | MS.gene24539:intron | 35.0% | |
| AATGAGATTATGATCCTGTG+TGG | - | chr1.2:5962596-5962615 | None:intergenic | 35.0% | |
| AATTAGCAGGCAAAAAGTTC+CGG | + | chr1.2:5966625-5966644 | MS.gene24539:intron | 35.0% | |
| ACTCATAATCCAAATTCGCA+AGG | - | chr1.2:5964741-5964760 | None:intergenic | 35.0% | |
| AGAAACCTGTCAATGTTGAT+GGG | - | chr1.2:5962724-5962743 | None:intergenic | 35.0% | |
| AGATAAGCATAATCAGGTCA+AGG | - | chr1.2:5965124-5965143 | None:intergenic | 35.0% | |
| AGATCATCATCATAGGAAAC+AGG | - | chr1.2:5967087-5967106 | None:intergenic | 35.0% | |
| AGTACAAAATTCCTAAAGGG+TGG | - | chr1.2:5965662-5965681 | None:intergenic | 35.0% | |
| AGTAGACTAAGTGTGTGTTT+GGG | + | chr1.2:5966222-5966241 | MS.gene24539:intron | 35.0% | |
| AGTTCAGATTCTACCTGATT+TGG | + | chr1.2:5965093-5965112 | MS.gene24539:intron | 35.0% | |
| ATGTAGGAGAATCAAACTGA+AGG | + | chr1.2:5965582-5965601 | MS.gene24539:intron | 35.0% | |
| CAATTCCATATATTAGACCG+AGG | + | chr1.2:5966550-5966569 | MS.gene24539:intron | 35.0% | |
| CCAACCTTACAAATGTTGTT+GGG | + | chr1.2:5964021-5964040 | MS.gene24539:intron | 35.0% | |
| CTCACAGTTGTAGAAAACAT+AGG | - | chr1.2:5966503-5966522 | None:intergenic | 35.0% | |
| CTTAACCATTGAAGTGAAGT+AGG | + | chr1.2:5964487-5964506 | MS.gene24539:intron | 35.0% | |
| GAAATGTTTCCTTGCGAATT+TGG | + | chr1.2:5964729-5964748 | MS.gene24539:intron | 35.0% | |
| GAACAAGACCATAATCGAAA+CGG | + | chr1.2:5962562-5962581 | MS.gene24539:CDS | 35.0% | |
| GAAGTGAAGTGATTTCTGTT+TGG | + | chr1.2:5966297-5966316 | MS.gene24539:intron | 35.0% | |
| GAATGTGAGTCTAATCTAGT+AGG | + | chr1.2:5964184-5964203 | MS.gene24539:intron | 35.0% | |
| GGACTAAAAGCAACTTTACT+TGG | + | chr1.2:5966426-5966445 | MS.gene24539:intron | 35.0% | |
| GTCTAAATTCGTGTAGGATA+GGG | + | chr1.2:5963176-5963195 | MS.gene24539:intron | 35.0% | |
| GTTGTATTGTATGGTCTTCT+AGG | - | chr1.2:5965154-5965173 | None:intergenic | 35.0% | |
| TACATGGTATATACAGCTGT+AGG | + | chr1.2:5963061-5963080 | MS.gene24539:CDS | 35.0% | |
| TACTCACCTCTTCTTAGAAA+AGG | + | chr1.2:5965066-5965085 | MS.gene24539:intron | 35.0% | |
| TCCAACCTTACAAATGTTGT+TGG | + | chr1.2:5964020-5964039 | MS.gene24539:intron | 35.0% | |
| TGGTTAAAATCTGCAAGGTT+GGG | - | chr1.2:5965209-5965228 | None:intergenic | 35.0% | |
| TTTCATCGTTGTCCCATAAT+TGG | + | chr1.2:5964455-5964474 | MS.gene24539:intron | 35.0% | |
| TTTGACGAAGCAAAATCAAG+AGG | - | chr1.2:5963405-5963424 | None:intergenic | 35.0% | |
| ! | AAAGGACTTTTGCATTGAGT+TGG | - | chr1.2:5966376-5966395 | None:intergenic | 35.0% |
| ! | AATATTGGTGTTTATCAGCC+AGG | - | chr1.2:5965277-5965296 | None:intergenic | 35.0% |
| ! | AATTTTATGTTCACCTGCCT+CGG | - | chr1.2:5966570-5966589 | None:intergenic | 35.0% |
| ! | ATGCATCCTGTTTTACTTGT+AGG | + | chr1.2:5963475-5963494 | MS.gene24539:intron | 35.0% |
| ! | CAATGCAACACACATTTTAC+TGG | - | chr1.2:5964971-5964990 | None:intergenic | 35.0% |
| ! | CGATTTTTACTGAGAGGTTT+TGG | - | chr1.2:5962652-5962671 | None:intergenic | 35.0% |
| ! | CTTTGCGGATTTTCTAATCT+TGG | + | chr1.2:5964910-5964929 | MS.gene24539:intron | 35.0% |
| ! | GTGTTCTTTTACTTGTATGG+AGG | + | chr1.2:5963828-5963847 | MS.gene24539:intron | 35.0% |
| ! | TATTTTGTGGTGCAAGTTTG+TGG | + | chr1.2:5963874-5963893 | MS.gene24539:intron | 35.0% |
| ! | TGAATGTCAGAGCATTACTT+GGG | - | chr1.2:5963433-5963452 | None:intergenic | 35.0% |
| ! | TTGAATGTCAGAGCATTACT+TGG | - | chr1.2:5963434-5963453 | None:intergenic | 35.0% |
| !! | CTCTAACCTTTTCTAAGAAG+AGG | - | chr1.2:5965075-5965094 | None:intergenic | 35.0% |
| !! | GCTGTTTTCAGCTTATTTTC+AGG | + | chr1.2:5962886-5962905 | MS.gene24539:intron | 35.0% |
| !! | GTTTCTGGTTAAAATCTGCA+AGG | - | chr1.2:5965214-5965233 | None:intergenic | 35.0% |
| !!! | CTTTTTAAAGCTGTCCGATT+TGG | + | chr1.2:5965937-5965956 | MS.gene24539:intron | 35.0% |
| AACCATCTAAACAGCAGTCT+TGG | - | chr1.2:5966685-5966704 | None:intergenic | 40.0% | |
| AATAAGGACTTGGGAAAAGG+AGG | - | chr1.2:5964322-5964341 | None:intergenic | 40.0% | |
| ACACAATCAAAAGAACACCG+AGG | - | chr1.2:5963535-5963554 | None:intergenic | 40.0% | |
| AGAAGAAGACGATGTTGAGA+TGG | + | chr1.2:5962504-5962523 | MS.gene24539:CDS | 40.0% | |
| ATGGATGCCTGCTTAAAACT+TGG | - | chr1.2:5966901-5966920 | None:intergenic | 40.0% | |
| ATTAGCAGGCAAAAAGTTCC+GGG | + | chr1.2:5966626-5966645 | MS.gene24539:intron | 40.0% | |
| CAAGTATTCGGAAGTAAGAC+AGG | - | chr1.2:5963766-5963785 | None:intergenic | 40.0% | |
| CAGTAGACTAAGTGTGTGTT+TGG | + | chr1.2:5966221-5966240 | MS.gene24539:intron | 40.0% | |
| CATTTGTAAGGTTGGAACCA+AGG | - | chr1.2:5964016-5964035 | None:intergenic | 40.0% | |
| CCCAACAACATTTGTAAGGT+TGG | - | chr1.2:5964024-5964043 | None:intergenic | 40.0% | |
| CTGGTTAAAATCTGCAAGGT+TGG | - | chr1.2:5965210-5965229 | None:intergenic | 40.0% | |
| CTTTACGATTGTCCAAACTG+CGG | + | chr1.2:5963202-5963221 | MS.gene24539:intron | 40.0% | |
| GAAAAAAGCAAGAGAGTTCG+AGG | + | chr1.2:5966121-5966140 | MS.gene24539:CDS | 40.0% | |
| GAAGCAAAATCAAGAGGACT+GGG | - | chr1.2:5963399-5963418 | None:intergenic | 40.0% | |
| GAGACAGCCCTAATATATGT+AGG | + | chr1.2:5965566-5965585 | MS.gene24539:intron | 40.0% | |
| GCCACATTCCCATCAATAAA+GGG | - | chr1.2:5965024-5965043 | None:intergenic | 40.0% | |
| GGAGAACCTACAAGTAAAAC+AGG | - | chr1.2:5963484-5963503 | None:intergenic | 40.0% | |
| GGTCTAAATTCGTGTAGGAT+AGG | + | chr1.2:5963175-5963194 | MS.gene24539:intron | 40.0% | |
| GGTTTGTGATAGAGACATGT+CGG | + | chr1.2:5963017-5963036 | MS.gene24539:intron | 40.0% | |
| TCAAGCAGTAAGGACTTTGT+TGG | + | chr1.2:5965688-5965707 | MS.gene24539:intron | 40.0% | |
| TCCAAGCAGATCATCATCAT+AGG | - | chr1.2:5967094-5967113 | None:intergenic | 40.0% | |
| TCCCTTTATTGATGGGAATG+TGG | + | chr1.2:5965020-5965039 | MS.gene24539:intron | 40.0% | |
| TGATGTTGAAGAGGGTGAAT+TGG | + | chr1.2:5962528-5962547 | MS.gene24539:CDS | 40.0% | |
| TGCATGGTCTAAATTCGTGT+AGG | + | chr1.2:5963170-5963189 | MS.gene24539:intron | 40.0% | |
| TGCCACATTCCCATCAATAA+AGG | - | chr1.2:5965025-5965044 | None:intergenic | 40.0% | |
| TGCGCACTAGAAAATGTACA+AGG | - | chr1.2:5966955-5966974 | None:intergenic | 40.0% | |
| TGTTCCATTAAGTGCATCGA+CGG | + | chr1.2:5966196-5966215 | MS.gene24539:intron | 40.0% | |
| ! | AACCAAGACTGCTGTTTAGA+TGG | + | chr1.2:5966680-5966699 | MS.gene24539:intron | 40.0% |
| ! | AAGGAGCACATGCAAGTATT+CGG | - | chr1.2:5963778-5963797 | None:intergenic | 40.0% |
| ! | ACAGGAACACGTTTCTTTTC+AGG | - | chr1.2:5967045-5967064 | None:intergenic | 40.0% |
| ! | AGAATCCTCCTCTTTTTGCA+TGG | - | chr1.2:5966920-5966939 | None:intergenic | 40.0% |
| ! | ATTGGTCTCTGAATAGTAGC+AGG | - | chr1.2:5964386-5964405 | None:intergenic | 40.0% |
| ! | CAACATTGCAAGGAAGTACA+AGG | - | chr1.2:5963136-5963155 | None:intergenic | 40.0% |
| ! | CGATATCGTCAAAGAGGTAT+TGG | + | chr1.2:5963108-5963127 | MS.gene24539:intron | 40.0% |
| ! | GAGATGGTTGATGTTGAAGA+GGG | + | chr1.2:5962520-5962539 | MS.gene24539:CDS | 40.0% |
| ! | GTAGGTTCTCCTTTTTACAC+TGG | + | chr1.2:5963493-5963512 | MS.gene24539:intron | 40.0% |
| ! | GTGAAGTAGGTGCTGTATAA+TGG | + | chr1.2:5964500-5964519 | MS.gene24539:intron | 40.0% |
| ! | TACTTGCTGATCAAGCAGTA+AGG | + | chr1.2:5965678-5965697 | MS.gene24539:intron | 40.0% |
| ! | TCCTATGATGATGATCTGCT+TGG | + | chr1.2:5967090-5967109 | MS.gene24539:CDS | 40.0% |
| ! | TGAGATGGTTGATGTTGAAG+AGG | + | chr1.2:5962519-5962538 | MS.gene24539:CDS | 40.0% |
| !! | ACATTTTCTAGTGCGCATCA+GGG | + | chr1.2:5966958-5966977 | MS.gene24539:CDS | 40.0% |
| !! | AGAAAGAGAAAGGCTTTAGG+AGG | + | chr1.2:5962688-5962707 | MS.gene24539:CDS | 40.0% |
| !! | GCATACTAAAGAAGCATTGC+TGG | - | chr1.2:5964530-5964549 | None:intergenic | 40.0% |
| !! | TACATTTTCTAGTGCGCATC+AGG | + | chr1.2:5966957-5966976 | MS.gene24539:CDS | 40.0% |
| !! | TTCTAATCTTGGCTTGTCAC+TGG | + | chr1.2:5964921-5964940 | MS.gene24539:intron | 40.0% |
| ACCTGCCTCGGTCTAATATA+TGG | - | chr1.2:5966558-5966577 | None:intergenic | 45.0% | |
| AGAGGAGGATTCTTCTCAAG+AGG | + | chr1.2:5966927-5966946 | MS.gene24539:CDS | 45.0% | |
| AGTAGCAGGACAAGTCACAA+AGG | - | chr1.2:5964372-5964391 | None:intergenic | 45.0% | |
| ATACAGCTGTAGGTTGCCTT+GGG | + | chr1.2:5963071-5963090 | MS.gene24539:CDS | 45.0% | |
| ATGCACCCATCAACATTGAC+AGG | + | chr1.2:5962716-5962735 | MS.gene24539:CDS | 45.0% | |
| ATGGTAAGCGATTTCGGACA+GGG | + | chr1.2:5966039-5966058 | MS.gene24539:CDS | 45.0% | |
| CAAGATCAAGATAAACCGCC+AGG | + | chr1.2:5967018-5967037 | MS.gene24539:CDS | 45.0% | |
| CAGCACCTACTTCACTTCAA+TGG | - | chr1.2:5964495-5964514 | None:intergenic | 45.0% | |
| CGAAGCAAAATCAAGAGGAC+TGG | - | chr1.2:5963400-5963419 | None:intergenic | 45.0% | |
| CTGCTGATGGTAAGCGATTT+CGG | + | chr1.2:5966033-5966052 | MS.gene24539:CDS | 45.0% | |
| GAGATTATGATCCTGTGTGG+CGG | - | chr1.2:5962593-5962612 | None:intergenic | 45.0% | |
| GATATTTGGGGGTGAGTTTG+AGG | + | chr1.2:5963571-5963590 | MS.gene24539:intron | 45.0% | |
| GTTGAGCGATATCGTCAAAG+AGG | + | chr1.2:5963102-5963121 | MS.gene24539:CDS | 45.0% | |
| TAAGGTTGGAACCAAGGTTG+AGG | - | chr1.2:5964010-5964029 | None:intergenic | 45.0% | |
| TAGCCACTTCAACCTCTCTT+GGG | + | chr1.2:5963977-5963996 | MS.gene24539:intron | 45.0% | |
| TATACAGCTGTAGGTTGCCT+TGG | + | chr1.2:5963070-5963089 | MS.gene24539:CDS | 45.0% | |
| TCCATATATTAGACCGAGGC+AGG | + | chr1.2:5966554-5966573 | MS.gene24539:intron | 45.0% | |
| TGGGAATGTGGCATTGTTTG+AGG | + | chr1.2:5965032-5965051 | MS.gene24539:intron | 45.0% | |
| TGTGGTGTTTGCCTTGTGTA+TGG | + | chr1.2:5963892-5963911 | MS.gene24539:intron | 45.0% | |
| TTACTGGGAGATGAAGAGAG+AGG | - | chr1.2:5964955-5964974 | None:intergenic | 45.0% | |
| ! | ACTGCTGTTTAGATGGTTCC+GGG | + | chr1.2:5966687-5966706 | MS.gene24539:intron | 45.0% |
| ! | CGCTTCCGATTTTTACTGAG+AGG | - | chr1.2:5962658-5962677 | None:intergenic | 45.0% |
| ! | CTTTTACGAAAAAGGCAGCC+CGG | - | chr1.2:5966708-5966727 | None:intergenic | 45.0% |
| ! | GACTGCTGTTTAGATGGTTC+CGG | + | chr1.2:5966686-5966705 | MS.gene24539:intron | 45.0% |
| ! | GGAAGGAGCAAACTAGTTTC+TGG | - | chr1.2:5965229-5965248 | None:intergenic | 45.0% |
| ! | GTCTTTGCACTCACGTTTTG+TGG | + | chr1.2:5964557-5964576 | MS.gene24539:intron | 45.0% |
| !! | AAGGAACAATTGATGGCGCT+AGG | + | chr1.2:5965517-5965536 | MS.gene24539:intron | 45.0% |
| !! | ACACGTTTCTTTTCAGGACC+TGG | - | chr1.2:5967039-5967058 | None:intergenic | 45.0% |
| !! | GAGAAAGGCTTTAGGAGGAT+CGG | + | chr1.2:5962693-5962712 | MS.gene24539:CDS | 45.0% |
| !!! | GATAAGGTTTTAGGCGCAGA+AGG | - | chr1.2:5964877-5964896 | None:intergenic | 45.0% |
| !! | AATAAAAATATGATATATTT+AGG | - | chr1.2:5965382-5965401 | None:intergenic | 5.0% |
| AGCCACTTCAACCTCTCTTG+GGG | + | chr1.2:5963978-5963997 | MS.gene24539:intron | 50.0% | |
| CGTGAGTGCAAAGACAGATG+AGG | - | chr1.2:5964552-5964571 | None:intergenic | 50.0% | |
| GATGGTAAGCGATTTCGGAC+AGG | + | chr1.2:5966038-5966057 | MS.gene24539:CDS | 50.0% | |
| GCAGAGAACCACCATACACA+AGG | - | chr1.2:5963906-5963925 | None:intergenic | 50.0% | |
| GCAGGACAAGTCACAAAGGA+AGG | - | chr1.2:5964368-5964387 | None:intergenic | 50.0% | |
| GCAGGCATCCATGCAAAAAG+AGG | + | chr1.2:5966909-5966928 | MS.gene24539:CDS | 50.0% | |
| GGACTTGGGAAAAGGAGGAA+AGG | - | chr1.2:5964317-5964336 | None:intergenic | 50.0% | |
| GGCATCCATGCAAAAAGAGG+AGG | + | chr1.2:5966912-5966931 | MS.gene24539:CDS | 50.0% | |
| GGTCAAGGCTGAACCAAATC+AGG | - | chr1.2:5965109-5965128 | None:intergenic | 50.0% | |
| GGTGTTTGCCTTGTGTATGG+TGG | + | chr1.2:5963895-5963914 | MS.gene24539:intron | 50.0% | |
| GTAGACGCAATACAGTCCTG+TGG | + | chr1.2:5965999-5966018 | MS.gene24539:CDS | 50.0% | |
| GTAGCCACTTCAACCTCTCT+TGG | + | chr1.2:5963976-5963995 | MS.gene24539:intron | 50.0% | |
| TGCATTTGCGATGCGCAAGT+AGG | - | chr1.2:5967000-5967019 | None:intergenic | 50.0% | |
| TGGTAAGCGATTTCGGACAG+GGG | + | chr1.2:5966040-5966059 | MS.gene24539:CDS | 50.0% | |
| TGTGCCGTCGATGCACTTAA+TGG | - | chr1.2:5966203-5966222 | None:intergenic | 50.0% | |
| TTGCAATTGCAGCCGCAGTT+TGG | - | chr1.2:5963217-5963236 | None:intergenic | 50.0% | |
| !! | CGTTTCTTTTCAGGACCTGG+CGG | - | chr1.2:5967036-5967055 | None:intergenic | 50.0% |
| !!! | CAGGCAGCCAAGTTTTAAGC+AGG | + | chr1.2:5966891-5966910 | MS.gene24539:CDS | 50.0% |
| !!! | GGTTTTAGGCGCAGAAGGAA+AGG | - | chr1.2:5964872-5964891 | None:intergenic | 50.0% |
| CACCCCAAGAGAGGTTGAAG+TGG | - | chr1.2:5963983-5964002 | None:intergenic | 55.0% | |
| CACTTCAACCTCTCTTGGGG+TGG | + | chr1.2:5963981-5964000 | MS.gene24539:intron | 55.0% | |
| CGCTCAACGCAGAAATCCCA+AGG | - | chr1.2:5963090-5963109 | None:intergenic | 55.0% | |
| CGGCGACACCGTTTCGATTA+TGG | - | chr1.2:5962573-5962592 | None:intergenic | 55.0% | |
| GACGCAATACAGTCCTGTGG+AGG | + | chr1.2:5966002-5966021 | MS.gene24539:CDS | 55.0% | |
| GCTTACCATCAGCAGTCTGC+TGG | - | chr1.2:5966028-5966047 | None:intergenic | 55.0% | |
| GGTAAGCGATTTCGGACAGG+GGG | + | chr1.2:5966041-5966060 | MS.gene24539:CDS | 55.0% | |
| TGAGGAAACCACCCCAAGAG+AGG | - | chr1.2:5963992-5964011 | None:intergenic | 55.0% | |
| TGGGGTGGTTTCCTCAACCT+TGG | + | chr1.2:5963996-5964015 | MS.gene24539:intron | 55.0% | |
| AAGCGATTTCGGACAGGGGG+TGG | + | chr1.2:5966044-5966063 | MS.gene24539:CDS | 60.0% | |
| GGACAGGGGGTGGTGTATTG+TGG | + | chr1.2:5966054-5966073 | MS.gene24539:CDS | 60.0% | |
| GGAGGCCAGCAGACTGCTGA+TGG | + | chr1.2:5966020-5966039 | MS.gene24539:CDS | 65.0% | |
| ! | AGCAGTCTGCTGGCCTCCAC+AGG | - | chr1.2:5966018-5966037 | None:intergenic | 65.0% |
| !! | AAACGGTGTCGCCGCCACAC+AGG | + | chr1.2:5962579-5962598 | MS.gene24539:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 5962463 | 5967146 | 5962463 | ID=MS.gene24539 |
| chr1.2 | mRNA | 5962463 | 5967146 | 5962463 | ID=MS.gene24539.t1;Parent=MS.gene24539 |
| chr1.2 | exon | 5962463 | 5962737 | 5962463 | ID=MS.gene24539.t1.exon1;Parent=MS.gene24539.t1 |
| chr1.2 | CDS | 5962463 | 5962737 | 5962463 | ID=cds.MS.gene24539.t1;Parent=MS.gene24539.t1 |
| chr1.2 | exon | 5963018 | 5963123 | 5963018 | ID=MS.gene24539.t1.exon2;Parent=MS.gene24539.t1 |
| chr1.2 | CDS | 5963018 | 5963123 | 5963018 | ID=cds.MS.gene24539.t1;Parent=MS.gene24539.t1 |
| chr1.2 | exon | 5965999 | 5966142 | 5965999 | ID=MS.gene24539.t1.exon3;Parent=MS.gene24539.t1 |
| chr1.2 | CDS | 5965999 | 5966142 | 5965999 | ID=cds.MS.gene24539.t1;Parent=MS.gene24539.t1 |
| chr1.2 | exon | 5966883 | 5967146 | 5966883 | ID=MS.gene24539.t1.exon4;Parent=MS.gene24539.t1 |
| chr1.2 | CDS | 5966883 | 5967146 | 5966883 | ID=cds.MS.gene24539.t1;Parent=MS.gene24539.t1 |
| Gene Sequence |
| Protein sequence |
