Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28594.t1 | RHN42259.1 | 91 | 212 | 14 | 1 | 1 | 212 | 1 | 207 | 1.20E-103 | 386 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28594.t1 | Q2V6J9 | 34.0 | 200 | 119 | 4 | 10 | 202 | 11 | 204 | 3.8e-26 | 119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28594.t1 | A0A396GM87 | 91.0 | 212 | 14 | 1 | 1 | 212 | 1 | 207 | 8.4e-104 | 386.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene28594 | 0.833072 | 6.58E-56 | -1.69E-46 |
| MS.gene049549 | MS.gene28594 | 0.845453 | 4.02E-59 | -1.69E-46 |
| MS.gene050809 | MS.gene28594 | 0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene28594 | 0.81303 | 3.15E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene28594 | 0.833721 | 4.53E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene28594 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene051973 | MS.gene28594 | 0.812021 | 5.23E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene28594 | 0.844145 | 9.06E-59 | -1.69E-46 |
| MS.gene05240 | MS.gene28594 | 0.864439 | 1.21E-64 | -1.69E-46 |
| MS.gene052606 | MS.gene28594 | 0.820713 | 5.93E-53 | -1.69E-46 |
| MS.gene052702 | MS.gene28594 | 0.859136 | 5.10E-63 | -1.69E-46 |
| MS.gene052706 | MS.gene28594 | 0.813406 | 2.60E-51 | -1.69E-46 |
| MS.gene053031 | MS.gene28594 | 0.821245 | 4.47E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene28594 | 0.805095 | 1.58E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene28594 | 0.800059 | 1.72E-48 | -1.69E-46 |
| MS.gene053887 | MS.gene28594 | 0.844712 | 6.38E-59 | -1.69E-46 |
| MS.gene054146 | MS.gene28594 | 0.812196 | 4.79E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene28594 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene28594 | 0.842668 | 2.25E-58 | -1.69E-46 |
| MS.gene054742 | MS.gene28594 | 0.84952 | 3.07E-60 | -1.69E-46 |
| MS.gene05483 | MS.gene28594 | 0.837487 | 5.05E-57 | -1.69E-46 |
| MS.gene054884 | MS.gene28594 | 0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene055240 | MS.gene28594 | 0.816195 | 6.27E-52 | -1.69E-46 |
| MS.gene056218 | MS.gene28594 | 0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene28594 | 0.823832 | 1.12E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene28594 | 0.827345 | 1.65E-54 | -1.69E-46 |
| MS.gene056591 | MS.gene28594 | 0.825412 | 4.76E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene28594 | 0.82139 | 4.14E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene28594 | 0.84254 | 2.43E-58 | -1.69E-46 |
| MS.gene056715 | MS.gene28594 | 0.805315 | 1.42E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene28594 | 0.833429 | 5.36E-56 | -1.69E-46 |
| MS.gene056856 | MS.gene28594 | 0.830066 | 3.62E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene28594 | 0.840567 | 8.05E-58 | -1.69E-46 |
| MS.gene056922 | MS.gene28594 | 0.811905 | 5.54E-51 | -1.69E-46 |
| MS.gene056988 | MS.gene28594 | 0.801459 | 8.91E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene28594 | 0.844692 | 6.46E-59 | -1.69E-46 |
| MS.gene057544 | MS.gene28594 | 0.840037 | 1.11E-57 | -1.69E-46 |
| MS.gene057547 | MS.gene28594 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene28594 | 0.801525 | 8.64E-49 | -1.69E-46 |
| MS.gene057550 | MS.gene28594 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene28594 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene057820 | MS.gene28594 | 0.801813 | 7.54E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene28594 | 0.820347 | 7.20E-53 | -1.69E-46 |
| MS.gene058381 | MS.gene28594 | 0.821633 | 3.64E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene28594 | 0.864905 | 8.68E-65 | -1.69E-46 |
| MS.gene058838 | MS.gene28594 | -0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene28594 | 0.818632 | 1.77E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene28594 | 0.822367 | 2.46E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene28594 | 0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene059955 | MS.gene28594 | 0.861961 | 7.10E-64 | -1.69E-46 |
| MS.gene060087 | MS.gene28594 | 0.837812 | 4.17E-57 | -1.69E-46 |
| MS.gene060405 | MS.gene28594 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene060593 | MS.gene28594 | 0.81896 | 1.49E-52 | -1.69E-46 |
| MS.gene061092 | MS.gene28594 | 0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene061094 | MS.gene28594 | 0.819639 | 1.05E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28594.t1 | MTR_2g034990 | 82.547 | 212 | 33 | 1 | 1 | 208 | 1 | 212 | 2.92e-124 | 360 |
| MS.gene28594.t1 | MTR_2g035020 | 75.980 | 204 | 49 | 0 | 1 | 204 | 1 | 204 | 4.19e-103 | 306 |
| MS.gene28594.t1 | MTR_5g029800 | 73.500 | 200 | 49 | 1 | 1 | 200 | 1 | 196 | 7.92e-98 | 293 |
| MS.gene28594.t1 | MTR_5g067170 | 69.014 | 213 | 57 | 3 | 1 | 212 | 1 | 205 | 1.07e-90 | 275 |
| MS.gene28594.t1 | MTR_7g012120 | 70.500 | 200 | 57 | 1 | 1 | 200 | 6 | 203 | 2.32e-89 | 271 |
| MS.gene28594.t1 | MTR_4g117980 | 61.463 | 205 | 79 | 0 | 1 | 205 | 1 | 205 | 4.94e-85 | 260 |
| MS.gene28594.t1 | MTR_4g117960 | 66.162 | 198 | 65 | 1 | 1 | 198 | 1 | 196 | 4.49e-84 | 258 |
| MS.gene28594.t1 | MTR_6g035185 | 62.121 | 198 | 75 | 0 | 1 | 198 | 1 | 198 | 4.82e-76 | 237 |
| MS.gene28594.t1 | MTR_8g032950 | 58.128 | 203 | 82 | 1 | 2 | 204 | 3 | 202 | 3.81e-69 | 219 |
| MS.gene28594.t1 | MTR_6g035265 | 60.104 | 193 | 68 | 2 | 1 | 193 | 1 | 184 | 6.09e-69 | 218 |
| MS.gene28594.t1 | MTR_0536s0010 | 48.705 | 193 | 87 | 3 | 6 | 198 | 16 | 196 | 3.08e-56 | 186 |
| MS.gene28594.t1 | MTR_4g117950 | 48.663 | 187 | 85 | 2 | 6 | 192 | 1 | 176 | 1.33e-55 | 184 |
| MS.gene28594.t1 | MTR_2g035050 | 80.870 | 115 | 22 | 0 | 1 | 115 | 1 | 115 | 2.48e-55 | 173 |
| MS.gene28594.t1 | MTR_0536s0020 | 47.059 | 187 | 89 | 2 | 7 | 193 | 14 | 190 | 2.15e-53 | 178 |
| MS.gene28594.t1 | MTR_4g117890 | 48.128 | 187 | 87 | 2 | 7 | 193 | 9 | 185 | 4.05e-53 | 177 |
| MS.gene28594.t1 | MTR_4g118000 | 48.438 | 192 | 86 | 2 | 7 | 198 | 8 | 186 | 5.12e-53 | 177 |
| MS.gene28594.t1 | MTR_4g117970 | 59.231 | 130 | 48 | 2 | 81 | 210 | 56 | 180 | 6.52e-43 | 149 |
| MS.gene28594.t1 | MTR_4g031800 | 38.889 | 198 | 113 | 4 | 8 | 202 | 6 | 198 | 7.07e-42 | 147 |
| MS.gene28594.t1 | MTR_0536s0030 | 44.231 | 156 | 77 | 2 | 38 | 193 | 7 | 152 | 2.43e-38 | 136 |
| MS.gene28594.t1 | MTR_2g035040 | 76.923 | 78 | 18 | 0 | 118 | 195 | 23 | 100 | 3.69e-38 | 136 |
| MS.gene28594.t1 | MTR_7g070800 | 38.378 | 185 | 109 | 3 | 6 | 188 | 1 | 182 | 7.18e-34 | 126 |
| MS.gene28594.t1 | MTR_7g070740 | 35.263 | 190 | 118 | 2 | 1 | 188 | 1 | 187 | 3.87e-33 | 124 |
| MS.gene28594.t1 | MTR_7g070780 | 36.316 | 190 | 116 | 2 | 1 | 188 | 1 | 187 | 3.21e-32 | 122 |
| MS.gene28594.t1 | MTR_7g070860 | 38.251 | 183 | 108 | 3 | 8 | 188 | 4 | 183 | 4.50e-32 | 121 |
| MS.gene28594.t1 | MTR_4g485630 | 34.807 | 181 | 111 | 3 | 10 | 189 | 8 | 182 | 1.68e-31 | 119 |
| MS.gene28594.t1 | MTR_6g035295 | 36.126 | 191 | 115 | 5 | 10 | 196 | 11 | 198 | 4.40e-31 | 119 |
| MS.gene28594.t1 | MTR_7g055710 | 34.021 | 194 | 115 | 3 | 1 | 188 | 1 | 187 | 1.66e-30 | 117 |
| MS.gene28594.t1 | MTR_7g070930 | 36.313 | 179 | 109 | 3 | 14 | 190 | 17 | 192 | 3.45e-30 | 116 |
| MS.gene28594.t1 | MTR_5g016660 | 34.211 | 190 | 119 | 3 | 10 | 196 | 9 | 195 | 7.42e-30 | 115 |
| MS.gene28594.t1 | MTR_7g070910 | 35.789 | 190 | 117 | 3 | 1 | 188 | 1 | 187 | 1.06e-29 | 115 |
| MS.gene28594.t1 | MTR_7g070660 | 35.263 | 190 | 118 | 3 | 1 | 188 | 1 | 187 | 5.69e-29 | 113 |
| MS.gene28594.t1 | MTR_5g039900 | 34.211 | 190 | 119 | 3 | 10 | 196 | 12 | 198 | 9.09e-29 | 112 |
| MS.gene28594.t1 | MTR_7g071040 | 34.737 | 190 | 119 | 3 | 1 | 188 | 7 | 193 | 1.09e-28 | 112 |
| MS.gene28594.t1 | MTR_7g070610 | 35.417 | 192 | 117 | 4 | 1 | 188 | 1 | 189 | 1.46e-28 | 112 |
| MS.gene28594.t1 | MTR_8g066610 | 30.732 | 205 | 125 | 4 | 9 | 199 | 7 | 208 | 3.82e-27 | 107 |
| MS.gene28594.t1 | MTR_5g045970 | 34.973 | 183 | 103 | 6 | 15 | 189 | 20 | 194 | 6.97e-27 | 107 |
| MS.gene28594.t1 | MTR_7g071050 | 34.043 | 188 | 114 | 3 | 2 | 187 | 4 | 183 | 8.37e-27 | 106 |
| MS.gene28594.t1 | MTR_7g117405 | 33.696 | 184 | 113 | 4 | 13 | 190 | 12 | 192 | 1.28e-26 | 106 |
| MS.gene28594.t1 | MTR_7g039570 | 32.787 | 183 | 117 | 4 | 10 | 189 | 13 | 192 | 1.50e-26 | 102 |
| MS.gene28594.t1 | MTR_5g045960 | 36.022 | 186 | 107 | 7 | 12 | 189 | 8 | 189 | 2.17e-26 | 105 |
| MS.gene28594.t1 | MTR_7g070810 | 34.896 | 192 | 119 | 4 | 8 | 196 | 6 | 194 | 3.78e-26 | 105 |
| MS.gene28594.t1 | MTR_7g070940 | 34.973 | 183 | 114 | 3 | 8 | 188 | 6 | 185 | 4.89e-26 | 104 |
| MS.gene28594.t1 | MTR_5g040030 | 33.152 | 184 | 117 | 4 | 8 | 188 | 11 | 191 | 5.10e-26 | 104 |
| MS.gene28594.t1 | MTR_4g108250 | 33.679 | 193 | 120 | 4 | 1 | 188 | 1 | 190 | 5.12e-26 | 104 |
| MS.gene28594.t1 | MTR_1g062380 | 33.702 | 181 | 108 | 5 | 15 | 189 | 20 | 194 | 1.68e-25 | 103 |
| MS.gene28594.t1 | MTR_7g102560 | 33.333 | 195 | 113 | 8 | 4 | 189 | 1 | 187 | 2.36e-25 | 102 |
| MS.gene28594.t1 | MTR_1g040310 | 34.010 | 197 | 121 | 5 | 4 | 196 | 8 | 199 | 8.65e-24 | 98.6 |
| MS.gene28594.t1 | MTR_7g102460 | 32.432 | 185 | 116 | 5 | 11 | 188 | 7 | 189 | 2.13e-23 | 97.4 |
| MS.gene28594.t1 | MTR_7g102490 | 30.811 | 185 | 119 | 5 | 11 | 188 | 7 | 189 | 4.63e-23 | 96.7 |
| MS.gene28594.t1 | MTR_7g102450 | 33.862 | 189 | 105 | 6 | 13 | 196 | 11 | 184 | 9.13e-23 | 95.5 |
| MS.gene28594.t1 | MTR_4g024020 | 32.432 | 185 | 116 | 6 | 11 | 188 | 7 | 189 | 1.82e-22 | 94.7 |
| MS.gene28594.t1 | MTR_7g102550 | 32.275 | 189 | 107 | 7 | 13 | 189 | 9 | 188 | 1.99e-22 | 94.7 |
| MS.gene28594.t1 | MTR_4g485590 | 39.552 | 134 | 79 | 1 | 12 | 143 | 10 | 143 | 1.04e-21 | 92.0 |
| MS.gene28594.t1 | MTR_4g485620 | 29.762 | 168 | 113 | 2 | 23 | 188 | 1 | 165 | 1.06e-21 | 92.4 |
| MS.gene28594.t1 | MTR_7g470590 | 36.000 | 125 | 77 | 2 | 1 | 122 | 1 | 125 | 2.01e-21 | 85.9 |
| MS.gene28594.t1 | MTR_7g070570 | 36.000 | 125 | 77 | 2 | 1 | 122 | 1 | 125 | 2.01e-21 | 85.9 |
| MS.gene28594.t1 | MTR_7g070870 | 31.443 | 194 | 124 | 4 | 8 | 198 | 16 | 203 | 4.14e-21 | 90.9 |
| MS.gene28594.t1 | MTR_4g485640 | 30.392 | 204 | 116 | 6 | 19 | 214 | 217 | 402 | 2.30e-18 | 83.2 |
| MS.gene28594.t1 | MTR_7g102520 | 29.121 | 182 | 114 | 7 | 14 | 189 | 15 | 187 | 1.19e-17 | 81.3 |
| MS.gene28594.t1 | MTR_8g044140 | 32.544 | 169 | 105 | 5 | 36 | 200 | 2 | 165 | 1.03e-15 | 75.5 |
| MS.gene28594.t1 | MTR_7g067330 | 31.169 | 154 | 98 | 5 | 9 | 158 | 5 | 154 | 2.26e-12 | 65.5 |
| MS.gene28594.t1 | MTR_8g068330 | 30.216 | 139 | 92 | 3 | 7 | 144 | 4 | 138 | 5.29e-12 | 64.7 |
| MS.gene28594.t1 | MTR_4g123553 | 25.517 | 145 | 104 | 2 | 8 | 152 | 12 | 152 | 3.21e-11 | 62.4 |
| MS.gene28594.t1 | MTR_7g067120 | 28.477 | 151 | 95 | 5 | 9 | 153 | 5 | 148 | 9.64e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28594.t1 | AT2G36780 | 35.326 | 184 | 111 | 4 | 12 | 189 | 13 | 194 | 8.08e-30 | 115 |
| MS.gene28594.t1 | AT2G36790 | 34.921 | 189 | 111 | 6 | 8 | 188 | 8 | 192 | 1.04e-29 | 115 |
| MS.gene28594.t1 | AT2G36770 | 37.500 | 184 | 107 | 4 | 12 | 189 | 13 | 194 | 3.59e-29 | 113 |
| MS.gene28594.t1 | AT2G36760 | 35.676 | 185 | 109 | 5 | 12 | 189 | 13 | 194 | 7.17e-29 | 112 |
| MS.gene28594.t1 | AT4G34131 | 31.959 | 194 | 117 | 6 | 8 | 190 | 7 | 196 | 4.07e-27 | 107 |
| MS.gene28594.t1 | AT3G53150 | 35.204 | 196 | 115 | 7 | 1 | 188 | 10 | 201 | 8.02e-27 | 107 |
| MS.gene28594.t1 | AT2G36750 | 33.511 | 188 | 109 | 6 | 12 | 189 | 9 | 190 | 8.13e-27 | 107 |
| MS.gene28594.t1 | AT2G36800 | 33.333 | 183 | 114 | 5 | 12 | 188 | 11 | 191 | 1.54e-25 | 103 |
| MS.gene28594.t1 | AT4G34135 | 28.497 | 193 | 125 | 4 | 8 | 190 | 8 | 197 | 6.52e-23 | 94.7 |
| MS.gene28594.t1 | AT3G53160 | 32.796 | 186 | 117 | 4 | 9 | 189 | 6 | 188 | 7.00e-23 | 95.9 |
| MS.gene28594.t1 | AT2G15490 | 28.251 | 223 | 126 | 7 | 14 | 212 | 10 | 222 | 7.14e-23 | 93.6 |
| MS.gene28594.t1 | AT4G34135 | 28.497 | 193 | 125 | 4 | 8 | 190 | 8 | 197 | 1.83e-22 | 94.7 |
| MS.gene28594.t1 | AT2G15480 | 29.500 | 200 | 118 | 6 | 5 | 189 | 4 | 195 | 2.81e-22 | 94.4 |
| MS.gene28594.t1 | AT2G15480 | 29.500 | 200 | 118 | 6 | 5 | 189 | 4 | 195 | 3.09e-22 | 94.4 |
| MS.gene28594.t1 | AT4G34138 | 30.729 | 192 | 113 | 6 | 11 | 188 | 9 | 194 | 3.84e-22 | 94.0 |
| MS.gene28594.t1 | AT2G15490 | 30.366 | 191 | 110 | 5 | 14 | 189 | 10 | 192 | 1.17e-21 | 92.4 |
| MS.gene28594.t1 | AT2G15490 | 30.366 | 191 | 110 | 5 | 14 | 189 | 10 | 192 | 1.24e-21 | 92.4 |
| MS.gene28594.t1 | AT1G10400 | 28.571 | 189 | 104 | 7 | 11 | 182 | 5 | 179 | 3.36e-12 | 65.1 |
| MS.gene28594.t1 | AT5G14860 | 25.946 | 185 | 116 | 4 | 14 | 182 | 11 | 190 | 6.78e-12 | 64.3 |
| MS.gene28594.t1 | AT5G03490 | 30.189 | 159 | 104 | 4 | 5 | 160 | 13 | 167 | 1.25e-11 | 63.5 |
| MS.gene28594.t1 | AT2G16890 | 26.012 | 173 | 119 | 4 | 16 | 182 | 14 | 183 | 4.37e-11 | 61.6 |
| MS.gene28594.t1 | AT2G16890 | 26.012 | 173 | 119 | 4 | 16 | 182 | 14 | 183 | 4.37e-11 | 61.6 |
| MS.gene28594.t1 | AT2G22590 | 28.472 | 144 | 95 | 4 | 11 | 148 | 13 | 154 | 9.00e-11 | 60.8 |
| MS.gene28594.t1 | AT2G16890 | 26.012 | 173 | 119 | 4 | 16 | 182 | 14 | 183 | 9.52e-11 | 60.8 |
Find 74 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATACGATGAGGAAAATT+TGG | 0.239558 | 8.4:+26824478 | None:intergenic |
| GTCATAGATTCAATGCCTTT+TGG | 0.250182 | 8.4:+26824778 | None:intergenic |
| TTGTGTCCAGTTGATACTTA+TGG | 0.299094 | 8.4:+26822964 | None:intergenic |
| TTCATTCCATTTCTAGCATC+TGG | 0.324858 | 8.4:-26824973 | MS.gene28594:CDS |
| GGTTTGGGATCTGAAACTTA+TGG | 0.337384 | 8.4:+26824614 | None:intergenic |
| ATCCGTTGAATGTGAGGTTT+GGG | 0.361331 | 8.4:+26824599 | None:intergenic |
| TGGACCCATTGAGGATTTCA+TGG | 0.385605 | 8.4:-26824698 | MS.gene28594:CDS |
| GAAGTAAATTGTTTCTTATG+AGG | 0.385832 | 8.4:+26824545 | None:intergenic |
| GTTTGGGATCTGAAACTTAT+GGG | 0.393118 | 8.4:+26824615 | None:intergenic |
| GGATTGGGCGTTGGAGGGAG+TGG | 0.423540 | 8.4:+26824882 | None:intergenic |
| AGAGTGATTTGGTAAGGGAT+TGG | 0.434057 | 8.4:+26824866 | None:intergenic |
| GGTAAGGGATTGGGCGTTGG+AGG | 0.437108 | 8.4:+26824876 | None:intergenic |
| GAGTGATTTGGTAAGGGATT+GGG | 0.441100 | 8.4:+26824867 | None:intergenic |
| AAGTAAATTGTTTCTTATGA+GGG | 0.441464 | 8.4:+26824546 | None:intergenic |
| TTTGGTAAGGGATTGGGCGT+TGG | 0.449239 | 8.4:+26824873 | None:intergenic |
| ATATGTCCAGATGCTAGAAA+TGG | 0.452356 | 8.4:+26824967 | None:intergenic |
| AATCCGTTGAATGTGAGGTT+TGG | 0.455226 | 8.4:+26824598 | None:intergenic |
| GATTATCCATAAGTATCAAC+TGG | 0.463421 | 8.4:-26822970 | MS.gene28594:CDS |
| TTCTCCATGAAATCCTCAAT+GGG | 0.465488 | 8.4:+26824694 | None:intergenic |
| TTTCTCCATGAAATCCTCAA+TGG | 0.466084 | 8.4:+26824693 | None:intergenic |
| CGGATGAGAGTGATTTGGTA+AGG | 0.483086 | 8.4:+26824860 | None:intergenic |
| AATTTGCTAAGTACCTTTGG+AGG | 0.484015 | 8.4:+26824442 | None:intergenic |
| AGGAAAATTTGGAACAAGAA+AGG | 0.486118 | 8.4:+26824489 | None:intergenic |
| AGCGGCGGATGAGAGTGATT+TGG | 0.490013 | 8.4:+26824855 | None:intergenic |
| GAAAGTCAACAGTGTGGAGG+TGG | 0.499899 | 8.4:+26824821 | None:intergenic |
| CAGTTTGTGAGAATGTTTCA+AGG | 0.500870 | 8.4:-26822996 | MS.gene28594:CDS |
| CCACCGACTCCATCACCTCT+TGG | 0.501615 | 8.4:-26824750 | MS.gene28594:CDS |
| GTAAGGGATTGGGCGTTGGA+GGG | 0.504963 | 8.4:+26824877 | None:intergenic |
| AGAGGTGATGGAGTCGGTGG+TGG | 0.509899 | 8.4:+26824753 | None:intergenic |
| TATCAACTGGACACAACTCT+AGG | 0.511049 | 8.4:-26822957 | MS.gene28594:CDS |
| AGTCAACAGTGTGGAGGTGG+AGG | 0.511867 | 8.4:+26824824 | None:intergenic |
| ATACCCATGGGCAAATGACT+TGG | 0.513883 | 8.4:-26824638 | MS.gene28594:CDS |
| GTCATTTGCCCATGGGTATG+TGG | 0.520069 | 8.4:+26824642 | None:intergenic |
| TGCCCATGGGTATGTGGAGT+CGG | 0.539263 | 8.4:+26824648 | None:intergenic |
| CGTGGTGCAATGCTCCTCCA+TGG | 0.540948 | 8.4:-26824718 | MS.gene28594:CDS |
| GAACAAGTTGACCTCCCAAA+AGG | 0.544221 | 8.4:-26824793 | MS.gene28594:CDS |
| TGGGCCAAGTCATTTGCCCA+TGG | 0.545631 | 8.4:+26824634 | None:intergenic |
| ATCCCAAACCTCACATTCAA+CGG | 0.550263 | 8.4:-26824601 | MS.gene28594:CDS |
| GTGATAATCCGTTGAATGTG+AGG | 0.552125 | 8.4:+26824593 | None:intergenic |
| GTGGATCTTCCAAGAGGTGA+TGG | 0.553266 | 8.4:+26824741 | None:intergenic |
| GCAACTATGTTTGCATCCCA+TGG | 0.559370 | 8.4:-26824925 | MS.gene28594:CDS |
| GGGCCAAGTCATTTGCCCAT+GGG | 0.559413 | 8.4:+26824635 | None:intergenic |
| TGAAATCCTCAATGGGTCCA+TGG | 0.564035 | 8.4:+26824701 | None:intergenic |
| GACTGTGACTTGATGTCCAT+GGG | 0.566462 | 8.4:+26824909 | None:intergenic |
| AGTGTGGAGGTGGAGGAAGA+AGG | 0.574940 | 8.4:+26824831 | None:intergenic |
| GCTCCTCCATGGACCCATTG+AGG | 0.577302 | 8.4:-26824707 | MS.gene28594:CDS |
| GGGAGGTCAACTTGTTCGGA+GGG | 0.579466 | 8.4:+26824799 | None:intergenic |
| GAGGGATTCCACGAGGGAGA+CGG | 0.582027 | 8.4:+26824564 | None:intergenic |
| TGGGAGGTCAACTTGTTCGG+AGG | 0.584972 | 8.4:+26824798 | None:intergenic |
| ATCAACTGGACACAACTCTA+GGG | 0.585282 | 8.4:-26822956 | MS.gene28594:CDS |
| GGATGAGAGTGATTTGGTAA+GGG | 0.591219 | 8.4:+26824861 | None:intergenic |
| TCTCCGACTCCACATACCCA+TGG | 0.591948 | 8.4:-26824651 | MS.gene28594:CDS |
| TGACTGTGACTTGATGTCCA+TGG | 0.595694 | 8.4:+26824908 | None:intergenic |
| ATAAATTGATCAGCAATGGA+AGG | 0.598978 | 8.4:-26825027 | None:intergenic |
| GAGTCGGAGATGATACAATC+CGG | 0.599272 | 8.4:+26824664 | None:intergenic |
| GAGGTGGAGGAAGAAGGAAG+CGG | 0.602669 | 8.4:+26824837 | None:intergenic |
| TTTCATGGAGAAAGATCCAC+CGG | 0.605532 | 8.4:-26824683 | MS.gene28594:CDS |
| CTCCGACTCCACATACCCAT+GGG | 0.612539 | 8.4:-26824650 | MS.gene28594:CDS |
| CTTCCAAGAGGTGATGGAGT+CGG | 0.622827 | 8.4:+26824747 | None:intergenic |
| AGTTTGTGAGAATGTTTCAA+GGG | 0.623613 | 8.4:-26822995 | MS.gene28594:CDS |
| GGAATGAAGTGAAGTTTCAG+TGG | 0.626414 | 8.4:+26824988 | None:intergenic |
| CCAAGAGGTGATGGAGTCGG+TGG | 0.632542 | 8.4:+26824750 | None:intergenic |
| TCGGACAAGGTGATACGATG+AGG | 0.640390 | 8.4:+26824469 | None:intergenic |
| GTGGAGGAAGAAGGAAGCGG+CGG | 0.651820 | 8.4:+26824840 | None:intergenic |
| TCTTATGAGGGATTCCACGA+GGG | 0.666584 | 8.4:+26824558 | None:intergenic |
| AGGGAAAGTCAACAGTGTGG+AGG | 0.673336 | 8.4:+26824818 | None:intergenic |
| TCGGAGATGATACAATCCGG+TGG | 0.682187 | 8.4:+26824667 | None:intergenic |
| TTCTTATGAGGGATTCCACG+AGG | 0.682293 | 8.4:+26824557 | None:intergenic |
| CATGGAGGAGCATTGCACCA+CGG | 0.689620 | 8.4:+26824719 | None:intergenic |
| CGGAGGGAAAGTCAACAGTG+TGG | 0.729197 | 8.4:+26824815 | None:intergenic |
| GGAGGAGCATTGCACCACGG+TGG | 0.729530 | 8.4:+26824722 | None:intergenic |
| AATCCTCAATGGGTCCATGG+AGG | 0.729822 | 8.4:+26824704 | None:intergenic |
| ACCACGGTGGATCTTCCAAG+AGG | 0.735300 | 8.4:+26824735 | None:intergenic |
| ACCTCTTGGAAGATCCACCG+TGG | 0.758381 | 8.4:-26824736 | MS.gene28594:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTGAAATAATTAAAATTAG+TGG | - | chr8.4:26824616-26824635 | MS.gene28594:CDS | 15.0% |
| !! | CTTGTCTTATAATAATTATT+TGG | - | chr8.4:26824353-26824372 | MS.gene28594:intron | 15.0% |
| !! | TGGTTTATTAACATTATTAT+TGG | - | chr8.4:26824636-26824655 | MS.gene28594:CDS | 15.0% |
| !! | AAATTTATAGCCAATTTCTA+GGG | - | chr8.4:26824907-26824926 | MS.gene28594:CDS | 20.0% |
| !! | TGAAAAATTGAAAGATGAAA+TGG | - | chr8.4:26824744-26824763 | MS.gene28594:CDS | 20.0% |
| !! | TGAAATGGTTTATTTATAGT+AGG | - | chr8.4:26824759-26824778 | MS.gene28594:CDS | 20.0% |
| !!! | AAGTAAATTGTTTCTTATGA+GGG | + | chr8.4:26823419-26823438 | None:intergenic | 20.0% |
| !!! | TAACATTATTATTGGTTACT+AGG | - | chr8.4:26824644-26824663 | MS.gene28594:CDS | 20.0% |
| ! | AAAATTCAAAAAAGGATGTC+AGG | - | chr8.4:26824818-26824837 | MS.gene28594:CDS | 25.0% |
| ! | CAAATTTATAGCCAATTTCT+AGG | - | chr8.4:26824906-26824925 | MS.gene28594:CDS | 25.0% |
| ! | TATTAAGAGAAGATGTAAGA+AGG | - | chr8.4:26824706-26824725 | MS.gene28594:CDS | 25.0% |
| ! | TGATAAACAACTATATGAGA+TGG | - | chr8.4:26823822-26823841 | MS.gene28594:intron | 25.0% |
| !! | AATTTATAGCCAATTTCTAG+GGG | - | chr8.4:26824908-26824927 | MS.gene28594:CDS | 25.0% |
| !! | GAAGTAAATTGTTTCTTATG+AGG | + | chr8.4:26823420-26823439 | None:intergenic | 25.0% |
| AAACTGATAACACAATTTCG+AGG | - | chr8.4:26824141-26824160 | MS.gene28594:intron | 30.0% | |
| AACAACAATGTCATTAGGAT+AGG | + | chr8.4:26824459-26824478 | None:intergenic | 30.0% | |
| AAGCCACATGATTAATTCAA+AGG | - | chr8.4:26824411-26824430 | MS.gene28594:intron | 30.0% | |
| AGAGAGAAACATTAGTAAGA+TGG | - | chr8.4:26823957-26823976 | MS.gene28594:intron | 30.0% | |
| AGTCCTTTGAATTAATCATG+TGG | + | chr8.4:26824417-26824436 | None:intergenic | 30.0% | |
| AGTTTGTGAGAATGTTTCAA+GGG | - | chr8.4:26824967-26824986 | MS.gene28594:CDS | 30.0% | |
| ATAACACAATTTCGAGGAAT+TGG | - | chr8.4:26824147-26824166 | MS.gene28594:intron | 30.0% | |
| ATAGTTGCTATGTCAAAAAG+AGG | + | chr8.4:26823025-26823044 | None:intergenic | 30.0% | |
| GAGAGAAACATTAGTAAGAT+GGG | - | chr8.4:26823958-26823977 | MS.gene28594:intron | 30.0% | |
| GATTATCCATAAGTATCAAC+TGG | - | chr8.4:26824992-26825011 | MS.gene28594:CDS | 30.0% | |
| TAGTTGCTATGTCAAAAAGA+GGG | + | chr8.4:26823024-26823043 | None:intergenic | 30.0% | |
| TGTAAGAAGGCAATATGAAA+TGG | - | chr8.4:26824719-26824738 | MS.gene28594:CDS | 30.0% | |
| ! | AGGAAAATTTGGAACAAGAA+AGG | + | chr8.4:26823476-26823495 | None:intergenic | 30.0% |
| ! | ATTTATAGCCAATTTCTAGG+GGG | - | chr8.4:26824909-26824928 | MS.gene28594:CDS | 30.0% |
| ! | GCAGTATTGTACATATGTTT+TGG | - | chr8.4:26823781-26823800 | MS.gene28594:intron | 30.0% |
| ! | TAAGATGGGTTTGATCATTA+GGG | - | chr8.4:26823972-26823991 | MS.gene28594:intron | 30.0% |
| ! | TCATAGATTCAATGCCTTTT+GGG | + | chr8.4:26823186-26823205 | None:intergenic | 30.0% |
| !! | AGAAAATCAGTGATTTGCTA+CGG | - | chr8.4:26824871-26824890 | MS.gene28594:CDS | 30.0% |
| !!! | AGCAAATCACTGATTTTCTT+GGG | + | chr8.4:26824870-26824889 | None:intergenic | 30.0% |
| !!! | TAGCAAATCACTGATTTTCT+TGG | + | chr8.4:26824871-26824890 | None:intergenic | 30.0% |
| AAAGAAAAGTGGTTACCGAA+GGG | - | chr8.4:26823928-26823947 | MS.gene28594:intron | 35.0% | |
| AACAACTTTGCTGAACTTGA+TGG | - | chr8.4:26823592-26823611 | MS.gene28594:intron | 35.0% | |
| AAGAATTGATCTCCATGAAC+CGG | + | chr8.4:26824114-26824133 | None:intergenic | 35.0% | |
| ATATGTCCAGATGCTAGAAA+TGG | + | chr8.4:26822998-26823017 | None:intergenic | 35.0% | |
| CACGAAACAACAATGTCATT+AGG | + | chr8.4:26824464-26824483 | None:intergenic | 35.0% | |
| CAGTTTGTGAGAATGTTTCA+AGG | - | chr8.4:26824966-26824985 | MS.gene28594:CDS | 35.0% | |
| GTGAAGAAGAGAAAGAAAAG+TGG | - | chr8.4:26823917-26823936 | MS.gene28594:intron | 35.0% | |
| GTGAGGAAGCTAAAAATATG+AGG | - | chr8.4:26824277-26824296 | MS.gene28594:intron | 35.0% | |
| GTGATACGATGAGGAAAATT+TGG | + | chr8.4:26823487-26823506 | None:intergenic | 35.0% | |
| GTTCTACGAATAAGAGAAGT+TGG | + | chr8.4:26823676-26823695 | None:intergenic | 35.0% | |
| TGAATTAATCATGTGGCTTG+AGG | + | chr8.4:26824410-26824429 | None:intergenic | 35.0% | |
| TTCTCCATGAAATCCTCAAT+GGG | + | chr8.4:26823271-26823290 | None:intergenic | 35.0% | |
| TTTCTCCATGAAATCCTCAA+TGG | + | chr8.4:26823272-26823291 | None:intergenic | 35.0% | |
| TTTCTCTCTTCAAATCCCTT+CGG | + | chr8.4:26823946-26823965 | None:intergenic | 35.0% | |
| ! | AAGATGGGTTTGATCATTAG+GGG | - | chr8.4:26823973-26823992 | MS.gene28594:intron | 35.0% |
| ! | GTAAGATGGGTTTGATCATT+AGG | - | chr8.4:26823971-26823990 | MS.gene28594:intron | 35.0% |
| ! | GTCATAGATTCAATGCCTTT+TGG | + | chr8.4:26823187-26823206 | None:intergenic | 35.0% |
| ! | GTTTGGGATCTGAAACTTAT+GGG | + | chr8.4:26823350-26823369 | None:intergenic | 35.0% |
| ! | TCTTCTTTCCCTTTCTTTTC+AGG | + | chr8.4:26823892-26823911 | None:intergenic | 35.0% |
| ! | TTGTGTCCAGTTGATACTTA+TGG | + | chr8.4:26825001-26825020 | None:intergenic | 35.0% |
| ! | TTTATAGCCAATTTCTAGGG+GGG | - | chr8.4:26824910-26824929 | MS.gene28594:CDS | 35.0% |
| !! | AAGTACCTTTGGAGGTTTTT+CGG | + | chr8.4:26823515-26823534 | None:intergenic | 35.0% |
| !! | AATTTGCTAAGTACCTTTGG+AGG | + | chr8.4:26823523-26823542 | None:intergenic | 35.0% |
| !! | AGGAATTTGCTAAGTACCTT+TGG | + | chr8.4:26823526-26823545 | None:intergenic | 35.0% |
| !! | CTGTCTCAAGCATCATTTTT+AGG | + | chr8.4:26823546-26823565 | None:intergenic | 35.0% |
| !! | TTCATTCCATTTCTAGCATC+TGG | - | chr8.4:26822989-26823008 | MS.gene28594:CDS | 35.0% |
| !!! | GCAAATCACTGATTTTCTTG+GGG | + | chr8.4:26824869-26824888 | None:intergenic | 35.0% |
| AATAAAACTCGTGCAACGCA+CGG | + | chr8.4:26824678-26824697 | None:intergenic | 40.0% | |
| AATCCGTTGAATGTGAGGTT+TGG | + | chr8.4:26823367-26823386 | None:intergenic | 40.0% | |
| ACAATTTCGAGGAATTGGAG+TGG | - | chr8.4:26824152-26824171 | MS.gene28594:intron | 40.0% | |
| ACACAAGCTATTCAAGAAGG+TGG | - | chr8.4:26824330-26824349 | MS.gene28594:intron | 40.0% | |
| ATCAACTGGACACAACTCTA+GGG | - | chr8.4:26825006-26825025 | MS.gene28594:CDS | 40.0% | |
| ATCCCAAACCTCACATTCAA+CGG | - | chr8.4:26823361-26823380 | MS.gene28594:intron | 40.0% | |
| ATCCGTTGAATGTGAGGTTT+GGG | + | chr8.4:26823366-26823385 | None:intergenic | 40.0% | |
| ATCTGGTCACCCATTCATAT+GGG | - | chr8.4:26823861-26823880 | MS.gene28594:intron | 40.0% | |
| ATTCAAGAGAAAGCAGAGAG+AGG | - | chr8.4:26823697-26823716 | MS.gene28594:intron | 40.0% | |
| CAGGAACAACCCATATGAAT+GGG | + | chr8.4:26823873-26823892 | None:intergenic | 40.0% | |
| GAAAGAAAAGTGGTTACCGA+AGG | - | chr8.4:26823927-26823946 | MS.gene28594:intron | 40.0% | |
| GCAACAGAATGGTGTAAGAA+TGG | - | chr8.4:26824183-26824202 | MS.gene28594:intron | 40.0% | |
| GCTACACAAGCTATTCAAGA+AGG | - | chr8.4:26824327-26824346 | MS.gene28594:intron | 40.0% | |
| GCTCAATATCTTAACCTGTG+GGG | + | chr8.4:26824004-26824023 | None:intergenic | 40.0% | |
| GGAATGAAGTGAAGTTTCAG+TGG | + | chr8.4:26822977-26822996 | None:intergenic | 40.0% | |
| GGCTCAATATCTTAACCTGT+GGG | + | chr8.4:26824005-26824024 | None:intergenic | 40.0% | |
| GGGTTGTTCCTGAAAAGAAA+GGG | - | chr8.4:26823881-26823900 | MS.gene28594:intron | 40.0% | |
| GTGATAATCCGTTGAATGTG+AGG | + | chr8.4:26823372-26823391 | None:intergenic | 40.0% | |
| TATCAACTGGACACAACTCT+AGG | - | chr8.4:26825005-26825024 | MS.gene28594:CDS | 40.0% | |
| TCAGGAACAACCCATATGAA+TGG | + | chr8.4:26823874-26823893 | None:intergenic | 40.0% | |
| TGCTCAAGAGTTTGGAGAAA+AGG | - | chr8.4:26824305-26824324 | MS.gene28594:intron | 40.0% | |
| TGGCTCAATATCTTAACCTG+TGG | + | chr8.4:26824006-26824025 | None:intergenic | 40.0% | |
| TGGGTTGTTCCTGAAAAGAA+AGG | - | chr8.4:26823880-26823899 | MS.gene28594:intron | 40.0% | |
| TTTCATGGAGAAAGATCCAC+CGG | - | chr8.4:26823279-26823298 | MS.gene28594:intron | 40.0% | |
| ! | ATGGTGTAAGAATGGTGTTG+TGG | - | chr8.4:26824191-26824210 | MS.gene28594:intron | 40.0% |
| ! | GGTTTGGGATCTGAAACTTA+TGG | + | chr8.4:26823351-26823370 | None:intergenic | 40.0% |
| ! | TAGATTCAATGCCTTTTGGG+AGG | + | chr8.4:26823183-26823202 | None:intergenic | 40.0% |
| ! | TTATAGCCAATTTCTAGGGG+GGG | - | chr8.4:26824911-26824930 | MS.gene28594:CDS | 40.0% |
| !! | AAATCAGTGATTTGCTACGG+CGG | - | chr8.4:26824874-26824893 | MS.gene28594:CDS | 40.0% |
| !! | AGAGTGATTTGGTAAGGGAT+TGG | + | chr8.4:26823099-26823118 | None:intergenic | 40.0% |
| !! | GAGTGATTTGGTAAGGGATT+GGG | + | chr8.4:26823098-26823117 | None:intergenic | 40.0% |
| !! | GGATGAGAGTGATTTGGTAA+GGG | + | chr8.4:26823104-26823123 | None:intergenic | 40.0% |
| !! | TTTTGGGAGGTCAACTTGTT+CGG | + | chr8.4:26823170-26823189 | None:intergenic | 40.0% |
| AAACCACGAGTCACAAGGTT+TGG | - | chr8.4:26823641-26823660 | MS.gene28594:intron | 45.0% | |
| AATCGTAGAGGCTGTTAGTG+CGG | - | chr8.4:26824068-26824087 | MS.gene28594:intron | 45.0% | |
| AGGCTACTTGCTCAAGAGTT+TGG | - | chr8.4:26824297-26824316 | MS.gene28594:intron | 45.0% | |
| AGTCACAAGGTTTGGCATCT+TGG | - | chr8.4:26823649-26823668 | MS.gene28594:intron | 45.0% | |
| ATAAAACTCGTGCAACGCAC+GGG | + | chr8.4:26824677-26824696 | None:intergenic | 45.0% | |
| ATACCCATGGGCAAATGACT+TGG | - | chr8.4:26823324-26823343 | MS.gene28594:intron | 45.0% | |
| ATAGCATAGAGATGGCAGTG+AGG | - | chr8.4:26824238-26824257 | MS.gene28594:intron | 45.0% | |
| CATCTGGTCACCCATTCATA+TGG | - | chr8.4:26823860-26823879 | MS.gene28594:intron | 45.0% | |
| CTTGTCCGAAAAACCTCCAA+AGG | - | chr8.4:26823507-26823526 | MS.gene28594:intron | 45.0% | |
| GACTGTGACTTGATGTCCAT+GGG | + | chr8.4:26823056-26823075 | None:intergenic | 45.0% | |
| GAGTAGGGATAGCATAGAGA+TGG | - | chr8.4:26824230-26824249 | MS.gene28594:intron | 45.0% | |
| GAGTCGGAGATGATACAATC+CGG | + | chr8.4:26823301-26823320 | None:intergenic | 45.0% | |
| GATTTATGACGCATTGTGGG+GGG | - | chr8.4:26824040-26824059 | MS.gene28594:intron | 45.0% | |
| GCAACTATGTTTGCATCCCA+TGG | - | chr8.4:26823037-26823056 | MS.gene28594:intron | 45.0% | |
| GGATTTATGACGCATTGTGG+GGG | - | chr8.4:26824039-26824058 | MS.gene28594:intron | 45.0% | |
| GGGATTTATGACGCATTGTG+GGG | - | chr8.4:26824038-26824057 | MS.gene28594:intron | 45.0% | |
| GGGGATTTATGACGCATTGT+GGG | - | chr8.4:26824037-26824056 | MS.gene28594:intron | 45.0% | |
| GGGTTTGATCATTAGGGGTT+GGG | - | chr8.4:26823978-26823997 | MS.gene28594:intron | 45.0% | |
| TAAGATATTGAGCCACCCTG+CGG | - | chr8.4:26824011-26824030 | MS.gene28594:intron | 45.0% | |
| TCCGTGAGTTAAGCCAACTT+AGG | + | chr8.4:26823753-26823772 | None:intergenic | 45.0% | |
| TCTTATGAGGGATTCCACGA+GGG | + | chr8.4:26823407-26823426 | None:intergenic | 45.0% | |
| TGAAATCCTCAATGGGTCCA+TGG | + | chr8.4:26823264-26823283 | None:intergenic | 45.0% | |
| TGACTGTGACTTGATGTCCA+TGG | + | chr8.4:26823057-26823076 | None:intergenic | 45.0% | |
| TGGACCCATTGAGGATTTCA+TGG | - | chr8.4:26823264-26823283 | MS.gene28594:intron | 45.0% | |
| TGGGTTTGATCATTAGGGGT+TGG | - | chr8.4:26823977-26823996 | MS.gene28594:intron | 45.0% | |
| TGTTGTGGAGAGAGAGAAGT+TGG | - | chr8.4:26824206-26824225 | MS.gene28594:intron | 45.0% | |
| TTCTTATGAGGGATTCCACG+AGG | + | chr8.4:26823408-26823427 | None:intergenic | 45.0% | |
| ! | AGTTCCAATGATAACGTGGC+CGG | - | chr8.4:26824092-26824111 | MS.gene28594:intron | 45.0% |
| ! | GAACAAGTTGACCTCCCAAA+AGG | - | chr8.4:26823169-26823188 | MS.gene28594:intron | 45.0% |
| ! | GAGATTGATGGACAATGGTG+AGG | - | chr8.4:26824260-26824279 | MS.gene28594:intron | 45.0% |
| ! | GATTTTCTTGGGGACCTGTA+GGG | + | chr8.4:26824859-26824878 | None:intergenic | 45.0% |
| ! | GCCTAAGTTGGCTTAACTCA+CGG | - | chr8.4:26823749-26823768 | MS.gene28594:intron | 45.0% |
| ! | GTGAGGAGATTGATGGACAA+TGG | - | chr8.4:26824255-26824274 | MS.gene28594:intron | 45.0% |
| ! | TATAGCCAATTTCTAGGGGG+GGG | - | chr8.4:26824912-26824931 | MS.gene28594:CDS | 45.0% |
| ! | TCGTGGTTTTCTCGTAGTGT+TGG | + | chr8.4:26823630-26823649 | None:intergenic | 45.0% |
| ! | TGATTTTCTTGGGGACCTGT+AGG | + | chr8.4:26824860-26824879 | None:intergenic | 45.0% |
| !! | AGAGAGAGAAGTTGGTGAGT+AGG | - | chr8.4:26824214-26824233 | MS.gene28594:intron | 45.0% |
| !! | CGGATGAGAGTGATTTGGTA+AGG | + | chr8.4:26823105-26823124 | None:intergenic | 45.0% |
| !! | CTTTGGAGGTTTTTCGGACA+AGG | + | chr8.4:26823509-26823528 | None:intergenic | 45.0% |
| !! | GAGAGAGAAGTTGGTGAGTA+GGG | - | chr8.4:26824215-26824234 | MS.gene28594:intron | 45.0% |
| !! | ATAAAAAAAAAATTCAAAAA+AGG | - | chr8.4:26824810-26824829 | MS.gene28594:CDS | 5.0% |
| AAAGCAGAGAGAGGAGACGA+GGG | - | chr8.4:26823706-26823725 | MS.gene28594:intron | 50.0% | |
| AATCCTCAATGGGTCCATGG+AGG | + | chr8.4:26823261-26823280 | None:intergenic | 50.0% | |
| ACATGCACGAGAGCCTAAGT+TGG | - | chr8.4:26823737-26823756 | MS.gene28594:intron | 50.0% | |
| AGGGAAAGTCAACAGTGTGG+AGG | + | chr8.4:26823147-26823166 | None:intergenic | 50.0% | |
| ATCGTAGAGGCTGTTAGTGC+GGG | - | chr8.4:26824069-26824088 | MS.gene28594:intron | 50.0% | |
| ATGCCAAACCTTGTGACTCG+TGG | + | chr8.4:26823647-26823666 | None:intergenic | 50.0% | |
| CGAGAAAACCACGAGTCACA+AGG | - | chr8.4:26823636-26823655 | MS.gene28594:intron | 50.0% | |
| CGAGGAATTGGAGTGGAAGT+CGG | - | chr8.4:26824159-26824178 | MS.gene28594:intron | 50.0% | |
| GAAAGTCAACAGTGTGGAGG+TGG | + | chr8.4:26823144-26823163 | None:intergenic | 50.0% | |
| GATGGCAGTGAGGAGATTGA+TGG | - | chr8.4:26824248-26824267 | MS.gene28594:intron | 50.0% | |
| GGGGGATTTATGACGCATTG+TGG | - | chr8.4:26824036-26824055 | MS.gene28594:intron | 50.0% | |
| GGGGTTCACATCACTTGAAC+TGG | - | chr8.4:26824941-26824960 | MS.gene28594:CDS | 50.0% | |
| GTCATTTGCCCATGGGTATG+TGG | + | chr8.4:26823323-26823342 | None:intergenic | 50.0% | |
| GTGGATCTTCCAAGAGGTGA+TGG | + | chr8.4:26823224-26823243 | None:intergenic | 50.0% | |
| TCGGACAAGGTGATACGATG+AGG | + | chr8.4:26823496-26823515 | None:intergenic | 50.0% | |
| TCGGAGATGATACAATCCGG+TGG | + | chr8.4:26823298-26823317 | None:intergenic | 50.0% | |
| TGAACCGGCCACGTTATCAT+TGG | + | chr8.4:26824099-26824118 | None:intergenic | 50.0% | |
| TGGAAGTCGGTGCAACAGAA+TGG | - | chr8.4:26824172-26824191 | MS.gene28594:intron | 50.0% | |
| TTTGGTAAGGGATTGGGCGT+TGG | + | chr8.4:26823092-26823111 | None:intergenic | 50.0% | |
| ! | ACTTTTTACCGTCTCCCTCG+TGG | - | chr8.4:26823390-26823409 | MS.gene28594:intron | 50.0% |
| ! | ATAGCCAATTTCTAGGGGGG+GGG | - | chr8.4:26824913-26824932 | MS.gene28594:CDS | 50.0% |
| ! | ATGATAACGTGGCCGGTTCA+TGG | - | chr8.4:26824099-26824118 | MS.gene28594:intron | 50.0% |
| ! | CGGGAGTTCCAATGATAACG+TGG | - | chr8.4:26824088-26824107 | MS.gene28594:intron | 50.0% |
| !! | CTTCCAAGAGGTGATGGAGT+CGG | + | chr8.4:26823218-26823237 | None:intergenic | 50.0% |
| !! | GTGATTTGCTACGGCGGAAA+TGG | - | chr8.4:26824880-26824899 | MS.gene28594:CDS | 50.0% |
| ACCACGGTGGATCTTCCAAG+AGG | + | chr8.4:26823230-26823249 | None:intergenic | 55.0% | |
| ACCTCTTGGAAGATCCACCG+TGG | - | chr8.4:26823226-26823245 | MS.gene28594:intron | 55.0% | |
| AGCGGCGGATGAGAGTGATT+TGG | + | chr8.4:26823110-26823129 | None:intergenic | 55.0% | |
| AGTCAACAGTGTGGAGGTGG+AGG | + | chr8.4:26823141-26823160 | None:intergenic | 55.0% | |
| AGTGTGGAGGTGGAGGAAGA+AGG | + | chr8.4:26823134-26823153 | None:intergenic | 55.0% | |
| ATATTGAGCCACCCTGCGGT+GGG | - | chr8.4:26824015-26824034 | MS.gene28594:intron | 55.0% | |
| CGGAGGGAAAGTCAACAGTG+TGG | + | chr8.4:26823150-26823169 | None:intergenic | 55.0% | |
| CTCCGACTCCACATACCCAT+GGG | - | chr8.4:26823312-26823331 | MS.gene28594:intron | 55.0% | |
| GAAAGCAGAGAGAGGAGACG+AGG | - | chr8.4:26823705-26823724 | MS.gene28594:intron | 55.0% | |
| GAGGTGGAGGAAGAAGGAAG+CGG | + | chr8.4:26823128-26823147 | None:intergenic | 55.0% | |
| GGGCCAAGTCATTTGCCCAT+GGG | + | chr8.4:26823330-26823349 | None:intergenic | 55.0% | |
| TCATAAATCCCCCCACCGCA+GGG | + | chr8.4:26824029-26824048 | None:intergenic | 55.0% | |
| TCTCCGACTCCACATACCCA+TGG | - | chr8.4:26823311-26823330 | MS.gene28594:intron | 55.0% | |
| TGCCCATGGGTATGTGGAGT+CGG | + | chr8.4:26823317-26823336 | None:intergenic | 55.0% | |
| TGGGCCAAGTCATTTGCCCA+TGG | + | chr8.4:26823331-26823350 | None:intergenic | 55.0% | |
| TGGGGGGAACTCAATCGTAG+AGG | - | chr8.4:26824056-26824075 | MS.gene28594:intron | 55.0% | |
| ! | GGGAGGTCAACTTGTTCGGA+GGG | + | chr8.4:26823166-26823185 | None:intergenic | 55.0% |
| ! | TAGCCAATTTCTAGGGGGGG+GGG | - | chr8.4:26824914-26824933 | MS.gene28594:CDS | 55.0% |
| ! | TGGGAGGTCAACTTGTTCGG+AGG | + | chr8.4:26823167-26823186 | None:intergenic | 55.0% |
| !! | CATGGAGGAGCATTGCACCA+CGG | + | chr8.4:26823246-26823265 | None:intergenic | 55.0% |
| !! | GCGTGCGCAATAGAAGCATC+TGG | - | chr8.4:26823844-26823863 | MS.gene28594:intron | 55.0% |
| !! | GTAAGGGATTGGGCGTTGGA+GGG | + | chr8.4:26823088-26823107 | None:intergenic | 55.0% |
| ATGTCAGGTACCCCGCACGT+GGG | - | chr8.4:26824833-26824852 | MS.gene28594:CDS | 60.0% | |
| CGTGGTGCAATGCTCCTCCA+TGG | - | chr8.4:26823244-26823263 | MS.gene28594:intron | 60.0% | |
| GAGGGATTCCACGAGGGAGA+CGG | + | chr8.4:26823401-26823420 | None:intergenic | 60.0% | |
| GATATTGAGCCACCCTGCGG+TGG | - | chr8.4:26824014-26824033 | MS.gene28594:intron | 60.0% | |
| GCTCCTCCATGGACCCATTG+AGG | - | chr8.4:26823255-26823274 | MS.gene28594:intron | 60.0% | |
| GTCATAAATCCCCCCACCGC+AGG | + | chr8.4:26824030-26824049 | None:intergenic | 60.0% | |
| GTGGAGGAAGAAGGAAGCGG+CGG | + | chr8.4:26823125-26823144 | None:intergenic | 60.0% | |
| TATTGAGCCACCCTGCGGTG+GGG | - | chr8.4:26824016-26824035 | MS.gene28594:intron | 60.0% | |
| ! | AGCCAATTTCTAGGGGGGGG+GGG | - | chr8.4:26824915-26824934 | MS.gene28594:CDS | 60.0% |
| !! | AGAGGTGATGGAGTCGGTGG+TGG | + | chr8.4:26823212-26823231 | None:intergenic | 60.0% |
| !! | CCAAGAGGTGATGGAGTCGG+TGG | + | chr8.4:26823215-26823234 | None:intergenic | 60.0% |
| !! | CCACCGACTCCATCACCTCT+TGG | - | chr8.4:26823212-26823231 | MS.gene28594:intron | 60.0% |
| !! | GGTAAGGGATTGGGCGTTGG+AGG | + | chr8.4:26823089-26823108 | None:intergenic | 60.0% |
| ATTGAGCCACCCTGCGGTGG+GGG | - | chr8.4:26824017-26824036 | MS.gene28594:intron | 65.0% | |
| CATTAGGGGTTGGGCCCCAC+AGG | - | chr8.4:26823987-26824006 | MS.gene28594:intron | 65.0% | |
| GATGTCAGGTACCCCGCACG+TGG | - | chr8.4:26824832-26824851 | MS.gene28594:CDS | 65.0% | |
| TAAATCCCCCCACCGCAGGG+TGG | + | chr8.4:26824026-26824045 | None:intergenic | 65.0% | |
| ! | AATTTCTAGGGGGGGGGGGG+GGG | - | chr8.4:26824919-26824938 | MS.gene28594:CDS | 65.0% |
| ! | CAATTTCTAGGGGGGGGGGG+GGG | - | chr8.4:26824918-26824937 | MS.gene28594:CDS | 65.0% |
| ! | CCAATTTCTAGGGGGGGGGG+GGG | - | chr8.4:26824917-26824936 | MS.gene28594:CDS | 65.0% |
| ! | GCCAATTTCTAGGGGGGGGG+GGG | - | chr8.4:26824916-26824935 | MS.gene28594:CDS | 65.0% |
| !! | GGAGGAGCATTGCACCACGG+TGG | + | chr8.4:26823243-26823262 | None:intergenic | 65.0% |
| !! | GGATTGGGCGTTGGAGGGAG+TGG | + | chr8.4:26823083-26823102 | None:intergenic | 65.0% |
| ACCTGTAGGGCCCACGTGCG+GGG | + | chr8.4:26824846-26824865 | None:intergenic | 70.0% | |
| CCCCCCCCCCCCCTAGAAAT+TGG | + | chr8.4:26824920-26824939 | None:intergenic | 70.0% | |
| GACCTGTAGGGCCCACGTGC+GGG | + | chr8.4:26824847-26824866 | None:intergenic | 70.0% | |
| GGACCTGTAGGGCCCACGTG+CGG | + | chr8.4:26824848-26824867 | None:intergenic | 70.0% | |
| TTGAGCCACCCTGCGGTGGG+GGG | - | chr8.4:26824018-26824037 | MS.gene28594:intron | 70.0% | |
| ! | ATTTCTAGGGGGGGGGGGGG+GGG | - | chr8.4:26824920-26824939 | MS.gene28594:CDS | 70.0% |
| ACCCCGCACGTGGGCCCTAC+AGG | - | chr8.4:26824842-26824861 | MS.gene28594:CDS | 75.0% | |
| ! | TTTCTAGGGGGGGGGGGGGG+GGG | - | chr8.4:26824921-26824940 | MS.gene28594:CDS | 75.0% |
| !! | TTCTAGGGGGGGGGGGGGGG+GGG | - | chr8.4:26824922-26824941 | MS.gene28594:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 26822950 | 26825034 | 26822950 | ID=MS.gene28594 |
| chr8.4 | mRNA | 26822950 | 26825034 | 26822950 | ID=MS.gene28594.t1;Parent=MS.gene28594 |
| chr8.4 | exon | 26824456 | 26825034 | 26824456 | ID=MS.gene28594.t1.exon1;Parent=MS.gene28594.t1 |
| chr8.4 | CDS | 26824456 | 26825034 | 26824456 | ID=cds.MS.gene28594.t1;Parent=MS.gene28594.t1 |
| chr8.4 | exon | 26822950 | 26823015 | 26822950 | ID=MS.gene28594.t1.exon2;Parent=MS.gene28594.t1 |
| chr8.4 | CDS | 26822950 | 26823015 | 26822950 | ID=cds.MS.gene28594.t1;Parent=MS.gene28594.t1 |
| Gene Sequence |
| Protein sequence |
