Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36146.t1 | XP_013457203.1 | 97.1 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 1.00E-242 | 849 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36146.t1 | Q7NXD4 | 33.4 | 290 | 163 | 8 | 84 | 364 | 5 | 273 | 3.7e-31 | 137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36146.t1 | A0A072UN52 | 97.1 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 7.4e-243 | 849.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene36146 | 0.803123 | 4.05E-49 | -1.69E-46 |
| MS.gene04917 | MS.gene36146 | 0.803797 | 2.94E-49 | -1.69E-46 |
| MS.gene049255 | MS.gene36146 | 0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene049382 | MS.gene36146 | 0.830251 | 3.26E-55 | -1.69E-46 |
| MS.gene049703 | MS.gene36146 | -0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene36146 | 0.836835 | 7.41E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene36146 | 0.811093 | 8.32E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene36146 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene36146 | 0.801935 | 7.12E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene36146 | 0.839977 | 1.15E-57 | -1.69E-46 |
| MS.gene050586 | MS.gene36146 | 0.802649 | 5.07E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene36146 | -0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene36146 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene36146 | 0.820132 | 8.06E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene36146 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene36146 | 0.82018 | 7.86E-53 | -1.69E-46 |
| MS.gene050987 | MS.gene36146 | 0.82821 | 1.02E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene36146 | 0.843476 | 1.37E-58 | -1.69E-46 |
| MS.gene051245 | MS.gene36146 | 0.830175 | 3.40E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene36146 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene36146 | 0.814266 | 1.68E-51 | -1.69E-46 |
| MS.gene051577 | MS.gene36146 | 0.805214 | 1.49E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene36146 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene36146 | 0.834079 | 3.69E-56 | -1.69E-46 |
| MS.gene051789 | MS.gene36146 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene052286 | MS.gene36146 | 0.828148 | 1.06E-54 | -1.69E-46 |
| MS.gene052302 | MS.gene36146 | 0.824602 | 7.39E-54 | -1.69E-46 |
| MS.gene052376 | MS.gene36146 | 0.822543 | 2.24E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene36146 | 0.827008 | 1.98E-54 | -1.69E-46 |
| MS.gene052856 | MS.gene36146 | 0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene053109 | MS.gene36146 | 0.830266 | 3.24E-55 | -1.69E-46 |
| MS.gene053216 | MS.gene36146 | 0.826753 | 2.28E-54 | -1.69E-46 |
| MS.gene053630 | MS.gene36146 | 0.823179 | 1.59E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene36146 | 0.812064 | 5.12E-51 | -1.69E-46 |
| MS.gene054823 | MS.gene36146 | 0.828114 | 1.08E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene36146 | 0.801187 | 1.01E-48 | -1.69E-46 |
| MS.gene055133 | MS.gene36146 | 0.83626 | 1.04E-56 | -1.69E-46 |
| MS.gene055207 | MS.gene36146 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene36146 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene055816 | MS.gene36146 | -0.807246 | 5.55E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene36146 | -0.814204 | 1.74E-51 | -1.69E-46 |
| MS.gene056432 | MS.gene36146 | 0.827159 | 1.82E-54 | -1.69E-46 |
| MS.gene056552 | MS.gene36146 | 0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene36146 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene056760 | MS.gene36146 | 0.837212 | 5.94E-57 | -1.69E-46 |
| MS.gene057057 | MS.gene36146 | 0.850047 | 2.19E-60 | -1.69E-46 |
| MS.gene057140 | MS.gene36146 | 0.859678 | 3.50E-63 | -1.69E-46 |
| MS.gene057234 | MS.gene36146 | 0.853516 | 2.27E-61 | -1.69E-46 |
| MS.gene057260 | MS.gene36146 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene057754 | MS.gene36146 | 0.821059 | 4.94E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene36146 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene36146 | 0.823307 | 1.49E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene36146 | 0.85137 | 9.28E-61 | -1.69E-46 |
| MS.gene058084 | MS.gene36146 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene058182 | MS.gene36146 | 0.843742 | 1.16E-58 | -1.69E-46 |
| MS.gene058238 | MS.gene36146 | 0.824747 | 6.83E-54 | -1.69E-46 |
| MS.gene058399 | MS.gene36146 | 0.824477 | 7.90E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene36146 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene058654 | MS.gene36146 | 0.820658 | 6.10E-53 | -1.69E-46 |
| MS.gene058661 | MS.gene36146 | -0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene36146 | 0.841327 | 5.08E-58 | -1.69E-46 |
| MS.gene058982 | MS.gene36146 | 0.815305 | 9.90E-52 | -1.69E-46 |
| MS.gene059898 | MS.gene36146 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene36146 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene36146 | 0.804178 | 2.45E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene36146 | 0.862649 | 4.36E-64 | -1.69E-46 |
| MS.gene060296 | MS.gene36146 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene060297 | MS.gene36146 | 0.818929 | 1.52E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene36146 | 0.809905 | 1.50E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene36146 | 0.80333 | 3.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36146.t1 | MTR_4g094258 | 98.448 | 451 | 6 | 1 | 1 | 450 | 1 | 451 | 0.0 | 917 |
| MS.gene36146.t1 | MTR_4g094258 | 92.018 | 451 | 5 | 2 | 1 | 450 | 1 | 421 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36146.t1 | AT2G13840 | 62.619 | 420 | 151 | 3 | 31 | 448 | 17 | 432 | 0.0 | 541 |
Find 106 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTCTTGTTGATGATTT+TGG | 0.031208 | 4.2:+18946232 | MS.gene36146:CDS |
| CAAACCTTGTAATTGTTTCT+AGG | 0.169257 | 4.2:-18949432 | None:intergenic |
| TTGATCATTGTTTACCTCTT+TGG | 0.224468 | 4.2:+18949509 | MS.gene36146:CDS |
| AAAATCCTGTTGCTATTATT+AGG | 0.255436 | 4.2:+18947989 | MS.gene36146:CDS |
| CACTTCCCAGTTCAGATTCA+TGG | 0.274753 | 4.2:-18949297 | None:intergenic |
| CTATATGGTGCAATGCTATA+AGG | 0.299389 | 4.2:+18949368 | MS.gene36146:CDS |
| CAATGCTATAAGGGAATTAT+TGG | 0.306066 | 4.2:+18949378 | MS.gene36146:CDS |
| GATGACCCATGAACAAGTTT+TGG | 0.306632 | 4.2:+18946153 | MS.gene36146:CDS |
| CGGGCTACATGGAGCCTTCC+GGG | 0.310253 | 4.2:-18947712 | None:intergenic |
| GTAGAATCGGCTCGCAAATA+TGG | 0.314220 | 4.2:+18946992 | MS.gene36146:CDS |
| AAAAGTGATGGAAGGCTTGC+AGG | 0.316738 | 4.2:+18948051 | MS.gene36146:CDS |
| TTAAGGTAGCTAGGCCTATA+TGG | 0.320672 | 4.2:+18949353 | MS.gene36146:CDS |
| CTAGAAACAATTACAAGGTT+TGG | 0.330990 | 4.2:+18949433 | MS.gene36146:CDS |
| TGTAACTGAATGGGTTTCAT+TGG | 0.360755 | 4.2:+18946186 | MS.gene36146:CDS |
| TAAAAGCCAAAACTTGTTCA+TGG | 0.361148 | 4.2:-18946159 | None:intergenic |
| TAGAAACAATTACAAGGTTT+GGG | 0.368543 | 4.2:+18949434 | MS.gene36146:CDS |
| TTGCCGTTCTGGCTCATCCA+TGG | 0.379810 | 4.2:+18947959 | MS.gene36146:CDS |
| GAGCATGTTTGTAGGATTGC+AGG | 0.382471 | 4.2:+18947676 | MS.gene36146:CDS |
| TTCCAACGTTTCTACCAGTC+AGG | 0.399060 | 4.2:+18949585 | MS.gene36146:CDS |
| TTAGCATATTACAGCAGTAT+TGG | 0.401822 | 4.2:+18947538 | MS.gene36146:CDS |
| AGGACACCATGAATCTGAAC+TGG | 0.403868 | 4.2:+18949291 | MS.gene36146:CDS |
| GATGAAGTAGCGAAAGAAGA+AGG | 0.406465 | 4.2:-18946214 | None:intergenic |
| AACCTCCTAATAATAGCAAC+AGG | 0.413958 | 4.2:-18947994 | None:intergenic |
| TAATATGCTAAAACGTGAAC+AGG | 0.417023 | 4.2:-18947526 | None:intergenic |
| TTAAATGGGAGCATGTTTGT+AGG | 0.422997 | 4.2:+18947668 | MS.gene36146:CDS |
| TTAAAAGAAGCAGGCCTTCA+TGG | 0.425114 | 4.2:+18948015 | MS.gene36146:CDS |
| CTTATAGCATTGCACCATAT+AGG | 0.426022 | 4.2:-18949367 | None:intergenic |
| CAATTCAAACAAGAGCAATA+AGG | 0.426821 | 4.2:+18946081 | MS.gene36146:CDS |
| GATGGAAAATGAAGAGTTTG+AGG | 0.430917 | 4.2:+18949546 | MS.gene36146:CDS |
| ACGGGCTACATGGAGCCTTC+CGG | 0.436221 | 4.2:-18947713 | None:intergenic |
| CAAATCCTTTCCACAATACA+AGG | 0.438699 | 4.2:-18949485 | None:intergenic |
| TATATGGTGCAATGCTATAA+GGG | 0.441866 | 4.2:+18949369 | MS.gene36146:CDS |
| TTCTAAGTCTCTATGAGAAC+CGG | 0.445315 | 4.2:-18949616 | None:intergenic |
| AAGTCATGCAAAACTAGTAC+TGG | 0.451309 | 4.2:-18949328 | None:intergenic |
| CAACCATAGCACGGGCTACA+TGG | 0.457224 | 4.2:-18947723 | None:intergenic |
| CGAGCCGATTCTACAGCCTC+GGG | 0.458504 | 4.2:-18946983 | None:intergenic |
| GCTCTCTCAACAACCTTAGA+AGG | 0.460070 | 4.2:-18946340 | None:intergenic |
| TCTGACAGATCACGATACTA+TGG | 0.460637 | 4.2:+18946952 | MS.gene36146:CDS |
| TGCCGTTCTGGCTCATCCAT+GGG | 0.473635 | 4.2:+18947960 | MS.gene36146:CDS |
| CATCCCCGAGGCTGTAGAAT+CGG | 0.477174 | 4.2:+18946979 | MS.gene36146:CDS |
| ATGACTTTCTTAAGGTAGCT+AGG | 0.478259 | 4.2:+18949344 | MS.gene36146:CDS |
| ATTAGGAGGTTAAAAGAAGC+AGG | 0.481000 | 4.2:+18948006 | MS.gene36146:CDS |
| TTTATTGCTTCCTCCACCAC+AGG | 0.488429 | 4.2:-18947913 | None:intergenic |
| AACCGGAGTTCCTCCCTGAC+TGG | 0.502354 | 4.2:-18949599 | None:intergenic |
| AAAAGCCAAAACTTGTTCAT+GGG | 0.503915 | 4.2:-18946158 | None:intergenic |
| TAAAACTTACGCCGTTCATG+TGG | 0.507053 | 4.2:-18946363 | None:intergenic |
| CTCAATCCAGTTATGGGAGA+TGG | 0.510681 | 4.2:+18946037 | None:intergenic |
| TTGGTTAAGTAGCCAAGAGA+TGG | 0.514042 | 4.2:+18949528 | MS.gene36146:CDS |
| TATTGGACCATCAAAATTTG+AGG | 0.515732 | 4.2:+18947555 | MS.gene36146:CDS |
| GGGAAGTGAACCTGTGGTGG+AGG | 0.520171 | 4.2:+18947903 | MS.gene36146:CDS |
| ATGAAGTAGCGAAAGAAGAA+GGG | 0.523100 | 4.2:-18946213 | None:intergenic |
| TGTAGACCTCCATCCCATGA+AGG | 0.525586 | 4.2:-18948029 | None:intergenic |
| TAAAAGAAGCAGGCCTTCAT+GGG | 0.526089 | 4.2:+18948016 | MS.gene36146:CDS |
| TTCACCCTTGTATTGTGGAA+AGG | 0.529199 | 4.2:+18949480 | MS.gene36146:CDS |
| ATTGGAGGGTCAGACTATCA+TGG | 0.530154 | 4.2:+18949262 | MS.gene36146:CDS |
| GCGAGCCGATTCTACAGCCT+CGG | 0.530385 | 4.2:-18946984 | None:intergenic |
| GCCCGTGCTATGGTTGAAGC+AGG | 0.533657 | 4.2:+18947730 | MS.gene36146:CDS |
| GCTCCATGTAGCCCGTGCTA+TGG | 0.537065 | 4.2:+18947720 | MS.gene36146:CDS |
| AACGTTGGAAAGCTTCAACT+TGG | 0.537287 | 4.2:-18949572 | None:intergenic |
| CAGGGGAAGTGAACCTGTGG+TGG | 0.538470 | 4.2:+18947900 | MS.gene36146:intron |
| TACCAGTCAGGGAGGAACTC+CGG | 0.543925 | 4.2:+18949597 | MS.gene36146:CDS |
| AGAAGCAGGCCTTCATGGGA+TGG | 0.546814 | 4.2:+18948020 | MS.gene36146:CDS |
| GGAGGTTCACCCTTGTATTG+TGG | 0.547408 | 4.2:+18949475 | MS.gene36146:CDS |
| AAGAAGAATAAGAACAGAGG+TGG | 0.548356 | 4.2:+18946118 | MS.gene36146:CDS |
| CTAACCTAGAAACAATTACA+AGG | 0.549045 | 4.2:+18949428 | MS.gene36146:CDS |
| GTTAGTATTAGACGGTTCCT+CGG | 0.549211 | 4.2:-18949410 | None:intergenic |
| ATCCTGTTGCTATTATTAGG+AGG | 0.550357 | 4.2:+18947992 | MS.gene36146:CDS |
| GCAGGCAACGGAGTTGCTCC+CGG | 0.551611 | 4.2:+18947694 | MS.gene36146:CDS |
| ATTGTACTAACTTCAACACC+TGG | 0.552254 | 4.2:-18947028 | None:intergenic |
| GTTTCTAGGTTAGTATTAGA+CGG | 0.556827 | 4.2:-18949418 | None:intergenic |
| CAATATTACTTGGAGTAAGC+AGG | 0.557337 | 4.2:-18947805 | None:intergenic |
| GGGTCAGACTATCATGGAAG+AGG | 0.560598 | 4.2:+18949268 | MS.gene36146:CDS |
| AAGAAGAAGAATAAGAACAG+AGG | 0.572930 | 4.2:+18946115 | MS.gene36146:CDS |
| ATGGAGGTCTACAAAAGTGA+TGG | 0.578050 | 4.2:+18948039 | MS.gene36146:CDS |
| TCCCTGACTGGTAGAAACGT+TGG | 0.579843 | 4.2:-18949587 | None:intergenic |
| ACCTGCTTCAACCATAGCAC+GGG | 0.581188 | 4.2:-18947731 | None:intergenic |
| AACCTGCTTCAACCATAGCA+CGG | 0.582016 | 4.2:-18947732 | None:intergenic |
| TTTGGGGTGCAGAAGCCTGT+TGG | 0.583868 | 4.2:+18946250 | MS.gene36146:CDS |
| GTTTGTAGGATTGCAGGCAA+CGG | 0.584225 | 4.2:+18947682 | MS.gene36146:CDS |
| TCCAACGTTTCTACCAGTCA+GGG | 0.584764 | 4.2:+18949586 | MS.gene36146:CDS |
| TATGGCATTAAGATAATCCC+AGG | 0.585730 | 4.2:+18947010 | MS.gene36146:CDS |
| GTTGAGAGAGCCCACATGAA+CGG | 0.586954 | 4.2:+18946352 | MS.gene36146:CDS |
| AGTGACCTGGCTGATGCCTA+CGG | 0.590587 | 4.2:+18949229 | MS.gene36146:CDS |
| TGTCACTCTAAATGCAGTGA+TGG | 0.597504 | 4.2:+18946307 | MS.gene36146:CDS |
| TGCCCATGGATGAGCCAGAA+CGG | 0.598033 | 4.2:-18947962 | None:intergenic |
| ACAGATCACGATACTATGGC+AGG | 0.600390 | 4.2:+18946956 | MS.gene36146:CDS |
| GCAACGGAGTTGCTCCCGGA+AGG | 0.600663 | 4.2:+18947698 | MS.gene36146:CDS |
| AAAGGCCGTAGGCATCAGCC+AGG | 0.611891 | 4.2:-18949234 | None:intergenic |
| AGCAGGCCTTCATGGGATGG+AGG | 0.629146 | 4.2:+18948023 | MS.gene36146:CDS |
| TCAGACTATCATGGAAGAGG+AGG | 0.633037 | 4.2:+18949271 | MS.gene36146:CDS |
| TGGTGGAGACACTGAAGCAG+AGG | 0.633552 | 4.2:+18947501 | MS.gene36146:CDS |
| CATGCAAAACTAGTACTGGA+AGG | 0.634426 | 4.2:-18949324 | None:intergenic |
| ATTATTGGAGTGTTATGCCG+AGG | 0.638655 | 4.2:+18949393 | MS.gene36146:CDS |
| AGGTCTACAAAAGTGATGGA+AGG | 0.642912 | 4.2:+18948043 | MS.gene36146:CDS |
| TTGTACTAACTTCAACACCT+GGG | 0.643477 | 4.2:-18947027 | None:intergenic |
| TCTTGGCTACTTAACCAAAG+AGG | 0.654559 | 4.2:-18949523 | None:intergenic |
| AAAACTTACGCCGTTCATGT+GGG | 0.655200 | 4.2:-18946362 | None:intergenic |
| TTATCTTCGAGCAAAGAACA+TGG | 0.660434 | 4.2:+18947615 | MS.gene36146:CDS |
| TTTCAGGGGAAGTGAACCTG+TGG | 0.661634 | 4.2:+18947897 | MS.gene36146:intron |
| GTATGCAGCATATAGTGACC+TGG | 0.671490 | 4.2:+18949216 | MS.gene36146:intron |
| GGACACCATGAATCTGAACT+GGG | 0.676928 | 4.2:+18949292 | MS.gene36146:CDS |
| AAATCCTTTCCACAATACAA+GGG | 0.689638 | 4.2:-18949484 | None:intergenic |
| TACTATGGCAGGCATCCCCG+AGG | 0.703124 | 4.2:+18946967 | MS.gene36146:CDS |
| AACGTTTCTACCAGTCAGGG+AGG | 0.703221 | 4.2:+18949589 | MS.gene36146:CDS |
| GAGCCGATTCTACAGCCTCG+GGG | 0.740138 | 4.2:-18946982 | None:intergenic |
| AAAATGATTTGTGATACTGG+GGG | 0.788482 | 4.2:+18947934 | MS.gene36146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGGTTATTATTTTATA+AGG | + | chr4.2:18946708-18946727 | MS.gene36146:intron | 10.0% |
| !!! | ATTTTTGTTTGAATTATTTA+AGG | + | chr4.2:18946429-18946448 | MS.gene36146:intron | 10.0% |
| !! | AATATGTAATGAATATAAGA+AGG | - | chr4.2:18946588-18946607 | None:intergenic | 15.0% |
| !! | TTAATTAGAATCAATTATGA+AGG | + | chr4.2:18947363-18947382 | MS.gene36146:intron | 15.0% |
| !!! | ATTTTTCTTAACTACAAAAA+TGG | - | chr4.2:18947860-18947879 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAGTTAAGAAAAA+TGG | + | chr4.2:18947859-18947878 | MS.gene36146:intron | 15.0% |
| !!! | TACAGTTTTTTTGTTTTATT+TGG | - | chr4.2:18946485-18946504 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGTAACTGAAT+GGG | + | chr4.2:18946177-18946196 | MS.gene36146:CDS | 15.0% |
| !!! | AATTAACTTGAACTTGAAAT+TGG | - | chr4.2:18947349-18947368 | None:intergenic | 20.0% |
| !!! | ACATAAAAATCGTTATTTTG+CGG | + | chr4.2:18948974-18948993 | MS.gene36146:intron | 20.0% |
| !!! | ATAAAAATGATTTGTGATAC+TGG | + | chr4.2:18947931-18947950 | MS.gene36146:CDS | 20.0% |
| !!! | ATAAGTTTTTGTCAAACATA+AGG | + | chr4.2:18947584-18947603 | MS.gene36146:CDS | 20.0% |
| !!! | CTTTTAAATTTGTAACTGAA+TGG | + | chr4.2:18946176-18946195 | MS.gene36146:CDS | 20.0% |
| !!! | GATTTTTATGTTTCCAAAAT+CGG | - | chr4.2:18948965-18948984 | None:intergenic | 20.0% |
| !!! | TAAAAATGATTTGTGATACT+GGG | + | chr4.2:18947932-18947951 | MS.gene36146:CDS | 20.0% |
| !!! | TAAGTTTTTGTCAAACATAA+GGG | + | chr4.2:18947585-18947604 | MS.gene36146:CDS | 20.0% |
| !!! | TATTTTGAATGAATCAATTC+TGG | + | chr4.2:18947212-18947231 | MS.gene36146:intron | 20.0% |
| !!! | TTAGTACAATATTTTATCCA+AGG | + | chr4.2:18947041-18947060 | MS.gene36146:CDS | 20.0% |
| ! | AAAGCTTAACAAGCTAAAAA+TGG | + | chr4.2:18947642-18947661 | MS.gene36146:CDS | 25.0% |
| ! | AAGCGATAATATTCAATACT+CGG | + | chr4.2:18948849-18948868 | MS.gene36146:intron | 25.0% |
| ! | AATCGTCACTAAACAAAATT+GGG | + | chr4.2:18948425-18948444 | MS.gene36146:intron | 25.0% |
| ! | AGGATAATGAAGTCAATTTA+AGG | + | chr4.2:18946728-18946747 | MS.gene36146:intron | 25.0% |
| ! | ATGCGTTACAATCTAAATTA+CGG | + | chr4.2:18946612-18946631 | MS.gene36146:intron | 25.0% |
| ! | CTTAAGTTTGAAAATTACCT+TGG | - | chr4.2:18947061-18947080 | None:intergenic | 25.0% |
| ! | GGACACATTTACATAAAATT+AGG | + | chr4.2:18947269-18947288 | MS.gene36146:intron | 25.0% |
| ! | GGATGATAATTAGATTTGAT+GGG | + | chr4.2:18948626-18948645 | MS.gene36146:intron | 25.0% |
| ! | TAATAATTGTATTCAGAGGA+TGG | + | chr4.2:18946537-18946556 | MS.gene36146:intron | 25.0% |
| ! | TAATGAAGTCAATTTAAGGA+TGG | + | chr4.2:18946732-18946751 | MS.gene36146:intron | 25.0% |
| ! | TAGAAACAATTACAAGGTTT+GGG | + | chr4.2:18949434-18949453 | MS.gene36146:CDS | 25.0% |
| ! | TCACTAAATCTTACAATTTG+AGG | - | chr4.2:18948311-18948330 | None:intergenic | 25.0% |
| ! | TCTCATAAAAACCAAAACTA+AGG | + | chr4.2:18948132-18948151 | MS.gene36146:intron | 25.0% |
| ! | TGGATGATAATTAGATTTGA+TGG | + | chr4.2:18948625-18948644 | MS.gene36146:intron | 25.0% |
| ! | TGGTTAATAATTGTATTCAG+AGG | + | chr4.2:18946533-18946552 | MS.gene36146:intron | 25.0% |
| !! | AAAAATGATTTGTGATACTG+GGG | + | chr4.2:18947933-18947952 | MS.gene36146:CDS | 25.0% |
| !! | AAAATCCTGTTGCTATTATT+AGG | + | chr4.2:18947989-18948008 | MS.gene36146:CDS | 25.0% |
| !! | AAGAAAACTACCATTTGTTA+TGG | - | chr4.2:18948569-18948588 | None:intergenic | 25.0% |
| !! | ATTGATTTCCTTTGTAGTTT+AGG | + | chr4.2:18946877-18946896 | MS.gene36146:intron | 25.0% |
| !! | CAATTGATTTAGTGTATGTT+TGG | - | chr4.2:18947425-18947444 | None:intergenic | 25.0% |
| !! | TGTGCATCATTTTATGATTA+TGG | + | chr4.2:18946692-18946711 | MS.gene36146:intron | 25.0% |
| !! | TTAAGCATCTTGTATTTTCA+GGG | + | chr4.2:18947882-18947901 | MS.gene36146:intron | 25.0% |
| !! | TTCCAATGAATTCTAAAAGA+TGG | + | chr4.2:18946824-18946843 | MS.gene36146:intron | 25.0% |
| !!! | AACCATCTTTTAGAATTCAT+TGG | - | chr4.2:18946829-18946848 | None:intergenic | 25.0% |
| !!! | CGATATAATAGTTTTAAACC+TGG | + | chr4.2:18948379-18948398 | MS.gene36146:intron | 25.0% |
| !!! | TGATCTTGCTTGTTAATTTT+TGG | + | chr4.2:18949194-18949213 | MS.gene36146:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTGTCGT+AGG | + | chr4.2:18946393-18946412 | MS.gene36146:intron | 25.0% |
| AAATCCTTTCCACAATACAA+GGG | - | chr4.2:18949487-18949506 | None:intergenic | 30.0% | |
| AAGAAGAAGAATAAGAACAG+AGG | + | chr4.2:18946115-18946134 | MS.gene36146:CDS | 30.0% | |
| AATATTCAATACTCGGAATC+AGG | + | chr4.2:18948856-18948875 | MS.gene36146:intron | 30.0% | |
| ACTTTGTCAATTGTCATACA+AGG | + | chr4.2:18948162-18948181 | MS.gene36146:intron | 30.0% | |
| AGAACCAATGGAGAAAAAAA+AGG | - | chr4.2:18947458-18947477 | None:intergenic | 30.0% | |
| AGCTAAAAATGGCTCTTAAA+TGG | + | chr4.2:18947653-18947672 | MS.gene36146:CDS | 30.0% | |
| ATATTCAATACTCGGAATCA+GGG | + | chr4.2:18948857-18948876 | MS.gene36146:intron | 30.0% | |
| ATCGCTTCACTAATATGATT+AGG | - | chr4.2:18948836-18948855 | None:intergenic | 30.0% | |
| CAATCGTCACTAAACAAAAT+TGG | + | chr4.2:18948424-18948443 | MS.gene36146:intron | 30.0% | |
| CAATGCTATAAGGGAATTAT+TGG | + | chr4.2:18949378-18949397 | MS.gene36146:CDS | 30.0% | |
| CAATTCAAACAAGAGCAATA+AGG | + | chr4.2:18946081-18946100 | MS.gene36146:CDS | 30.0% | |
| CAATTCTGGTATAAATGAGT+TGG | + | chr4.2:18947226-18947245 | MS.gene36146:intron | 30.0% | |
| CATAAAAACCAAAACTAAGG+TGG | + | chr4.2:18948135-18948154 | MS.gene36146:intron | 30.0% | |
| CTAACCTAGAAACAATTACA+AGG | + | chr4.2:18949428-18949447 | MS.gene36146:CDS | 30.0% | |
| CTAGAAACAATTACAAGGTT+TGG | + | chr4.2:18949433-18949452 | MS.gene36146:CDS | 30.0% | |
| GAAAGTTAACTGTATTGTAG+AGG | + | chr4.2:18946766-18946785 | MS.gene36146:intron | 30.0% | |
| GCTAAAAATGGCTCTTAAAT+GGG | + | chr4.2:18947654-18947673 | MS.gene36146:CDS | 30.0% | |
| TAATATGCTAAAACGTGAAC+AGG | - | chr4.2:18947529-18947548 | None:intergenic | 30.0% | |
| TATATGGTGCAATGCTATAA+GGG | + | chr4.2:18949369-18949388 | MS.gene36146:CDS | 30.0% | |
| TATTGGACCATCAAAATTTG+AGG | + | chr4.2:18947555-18947574 | MS.gene36146:CDS | 30.0% | |
| TGTGATGTTATCAAATCATC+AGG | + | chr4.2:18948256-18948275 | MS.gene36146:intron | 30.0% | |
| TGTTACCATTTGTTCATAAC+AGG | + | chr4.2:18946916-18946935 | MS.gene36146:intron | 30.0% | |
| TGTTGTCACAATTGTGTAAT+AGG | + | chr4.2:18949127-18949146 | MS.gene36146:intron | 30.0% | |
| TTAGCATATTACAGCAGTAT+TGG | + | chr4.2:18947538-18947557 | MS.gene36146:CDS | 30.0% | |
| TTGATCATTGTTTACCTCTT+TGG | + | chr4.2:18949509-18949528 | MS.gene36146:CDS | 30.0% | |
| TTTCACCTGTTATGAACAAA+TGG | - | chr4.2:18946924-18946943 | None:intergenic | 30.0% | |
| TTTGATATTGCAATGAAACG+TGG | + | chr4.2:18948924-18948943 | MS.gene36146:intron | 30.0% | |
| ! | AAAAGCCAAAACTTGTTCAT+GGG | - | chr4.2:18946161-18946180 | None:intergenic | 30.0% |
| ! | AAAATGATTTGTGATACTGG+GGG | + | chr4.2:18947934-18947953 | MS.gene36146:CDS | 30.0% |
| ! | AGTTTTGCATGACTTTCTTA+AGG | + | chr4.2:18949336-18949355 | MS.gene36146:CDS | 30.0% |
| ! | CAAACCTTGTAATTGTTTCT+AGG | - | chr4.2:18949435-18949454 | None:intergenic | 30.0% |
| ! | GTTAAGCATCTTGTATTTTC+AGG | + | chr4.2:18947881-18947900 | MS.gene36146:intron | 30.0% |
| ! | GTTTCTAGGTTAGTATTAGA+CGG | - | chr4.2:18949421-18949440 | None:intergenic | 30.0% |
| ! | TAAAAGCCAAAACTTGTTCA+TGG | - | chr4.2:18946162-18946181 | None:intergenic | 30.0% |
| ! | TAAATGAGTTGGATGTAATG+TGG | + | chr4.2:18947237-18947256 | MS.gene36146:intron | 30.0% |
| ! | TAAGCATCTTGTATTTTCAG+GGG | + | chr4.2:18947883-18947902 | MS.gene36146:intron | 30.0% |
| ! | TAGGTTGAACGATAAATTTG+AGG | + | chr4.2:18947288-18947307 | MS.gene36146:intron | 30.0% |
| ! | TTCTAAAAGATGGTTGTCTA+AGG | + | chr4.2:18946834-18946853 | MS.gene36146:intron | 30.0% |
| ! | TTGATGCTTGTTGATTGAAT+TGG | + | chr4.2:18947085-18947104 | MS.gene36146:intron | 30.0% |
| ! | TTTTTGTCAAACATAAGGGA+CGG | + | chr4.2:18947589-18947608 | MS.gene36146:CDS | 30.0% |
| !!! | AAGTCCTTTTTTTTCTCCAT+TGG | + | chr4.2:18947451-18947470 | MS.gene36146:intron | 30.0% |
| !!! | ATCTCTTGTTGATGATTTTG+GGG | + | chr4.2:18946234-18946253 | MS.gene36146:CDS | 30.0% |
| !!! | CATCTCTTGTTGATGATTTT+GGG | + | chr4.2:18946233-18946252 | MS.gene36146:CDS | 30.0% |
| !!! | TCATCTCTTGTTGATGATTT+TGG | + | chr4.2:18946232-18946251 | MS.gene36146:CDS | 30.0% |
| AAAACGAGCCTAAACTACAA+AGG | - | chr4.2:18946888-18946907 | None:intergenic | 35.0% | |
| AAAATCGGATGTTACTGCAT+TGG | - | chr4.2:18948950-18948969 | None:intergenic | 35.0% | |
| AACCTCCTAATAATAGCAAC+AGG | - | chr4.2:18947997-18948016 | None:intergenic | 35.0% | |
| AAGAAGAATAAGAACAGAGG+TGG | + | chr4.2:18946118-18946137 | MS.gene36146:CDS | 35.0% | |
| AAGTCAATTTAAGGATGGTG+TGG | + | chr4.2:18946737-18946756 | MS.gene36146:intron | 35.0% | |
| AAGTCATGCAAAACTAGTAC+TGG | - | chr4.2:18949331-18949350 | None:intergenic | 35.0% | |
| AGCTTGAACACTTAAAACTG+TGG | + | chr4.2:18946513-18946532 | MS.gene36146:intron | 35.0% | |
| AGGCTGAAATTCAATTGTAG+AGG | + | chr4.2:18947308-18947327 | MS.gene36146:intron | 35.0% | |
| ATAACAAGTGAAGTGATGCA+TGG | + | chr4.2:18948352-18948371 | MS.gene36146:intron | 35.0% | |
| ATCAAAAAGATATCGGGCAA+AGG | - | chr4.2:18947779-18947798 | None:intergenic | 35.0% | |
| ATCATCCAATGTCCACAAAA+AGG | - | chr4.2:18948613-18948632 | None:intergenic | 35.0% | |
| ATCTAGCAATCAACAAGTGA+AGG | - | chr4.2:18947836-18947855 | None:intergenic | 35.0% | |
| ATGAAGTAGCGAAAGAAGAA+GGG | - | chr4.2:18946216-18946235 | None:intergenic | 35.0% | |
| ATGACTTTCTTAAGGTAGCT+AGG | + | chr4.2:18949344-18949363 | MS.gene36146:CDS | 35.0% | |
| ATTAGGAGGTTAAAAGAAGC+AGG | + | chr4.2:18948006-18948025 | MS.gene36146:CDS | 35.0% | |
| ATTGTACTAACTTCAACACC+TGG | - | chr4.2:18947031-18947050 | None:intergenic | 35.0% | |
| CAAATCCTTTCCACAATACA+AGG | - | chr4.2:18949488-18949507 | None:intergenic | 35.0% | |
| CAATATTACTTGGAGTAAGC+AGG | - | chr4.2:18947808-18947827 | None:intergenic | 35.0% | |
| CTATATGGTGCAATGCTATA+AGG | + | chr4.2:18949368-18949387 | MS.gene36146:CDS | 35.0% | |
| CTTATAGCATTGCACCATAT+AGG | - | chr4.2:18949370-18949389 | None:intergenic | 35.0% | |
| CTTCATACAGTCTCTTTATG+TGG | - | chr4.2:18948712-18948731 | None:intergenic | 35.0% | |
| GATGGAAAATGAAGAGTTTG+AGG | + | chr4.2:18949546-18949565 | MS.gene36146:CDS | 35.0% | |
| GATGTAATGTGGTTTATGTC+TGG | + | chr4.2:18947248-18947267 | MS.gene36146:intron | 35.0% | |
| GCACATATTTCAAAGAGTTG+TGG | - | chr4.2:18946677-18946696 | None:intergenic | 35.0% | |
| GTCCACCATCAAAAAGATAT+CGG | - | chr4.2:18947786-18947805 | None:intergenic | 35.0% | |
| TAATTGTCCAAGTGCATGTT+TGG | + | chr4.2:18947170-18947189 | MS.gene36146:intron | 35.0% | |
| TATGGCATTAAGATAATCCC+AGG | + | chr4.2:18947010-18947029 | MS.gene36146:CDS | 35.0% | |
| TCCACCATCAAAAAGATATC+GGG | - | chr4.2:18947785-18947804 | None:intergenic | 35.0% | |
| TCTGTGTCTTCCATAACAAA+TGG | + | chr4.2:18948556-18948575 | MS.gene36146:intron | 35.0% | |
| TGTTCGTTTATGACTAGACA+TGG | - | chr4.2:18949051-18949070 | None:intergenic | 35.0% | |
| TTATCTTCGAGCAAAGAACA+TGG | + | chr4.2:18947615-18947634 | MS.gene36146:CDS | 35.0% | |
| TTGTACTAACTTCAACACCT+GGG | - | chr4.2:18947030-18947049 | None:intergenic | 35.0% | |
| ! | AAGTAGATCCACCTTAGTTT+TGG | - | chr4.2:18948146-18948165 | None:intergenic | 35.0% |
| ! | AATGCAGTAACATCCGATTT+TGG | + | chr4.2:18948949-18948968 | MS.gene36146:intron | 35.0% |
| ! | ACTCTTCATTTTCCATCTCT+TGG | - | chr4.2:18949543-18949562 | None:intergenic | 35.0% |
| ! | ATCCTGTTGCTATTATTAGG+AGG | + | chr4.2:18947992-18948011 | MS.gene36146:CDS | 35.0% |
| ! | GGTTATTACGTAAGTGTTGT+GGG | - | chr4.2:18948514-18948533 | None:intergenic | 35.0% |
| ! | TGGTTATTACGTAAGTGTTG+TGG | - | chr4.2:18948515-18948534 | None:intergenic | 35.0% |
| ! | TGTAACTGAATGGGTTTCAT+TGG | + | chr4.2:18946186-18946205 | MS.gene36146:CDS | 35.0% |
| ! | TGTTGATTGAATTGGCACTT+TGG | + | chr4.2:18947093-18947112 | MS.gene36146:intron | 35.0% |
| ! | TTAAATGGGAGCATGTTTGT+AGG | + | chr4.2:18947668-18947687 | MS.gene36146:CDS | 35.0% |
| ! | TTTGCCCGATATCTTTTTGA+TGG | + | chr4.2:18947778-18947797 | MS.gene36146:CDS | 35.0% |
| !! | TAAGCTGTTTTGTCATTTCC+AGG | - | chr4.2:18948400-18948419 | None:intergenic | 35.0% |
| !! | TCTAGCTCCTCAAATTTTGA+TGG | - | chr4.2:18947565-18947584 | None:intergenic | 35.0% |
| !!! | ACAGGATTTTTTAATGCCCA+TGG | - | chr4.2:18947979-18947998 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCCACTTTTTG+AGG | - | chr4.2:18947410-18947429 | None:intergenic | 35.0% |
| !!! | TCCATCTCCACTTATTTTAG+AGG | - | chr4.2:18946792-18946811 | None:intergenic | 35.0% |
| !!! | TCGGAATCAGGGTTTTAAAT+GGG | + | chr4.2:18948868-18948887 | MS.gene36146:intron | 35.0% |
| AAAACTTACGCCGTTCATGT+GGG | - | chr4.2:18946365-18946384 | None:intergenic | 40.0% | |
| AAAGAGACTGTATGAAGCCT+AGG | + | chr4.2:18948715-18948734 | MS.gene36146:intron | 40.0% | |
| AACGTTGGAAAGCTTCAACT+TGG | - | chr4.2:18949575-18949594 | None:intergenic | 40.0% | |
| ACAACACAATGAGACGTAGT+AGG | - | chr4.2:18949113-18949132 | None:intergenic | 40.0% | |
| ATATCAAAGATCGCGACACA+AGG | - | chr4.2:18948912-18948931 | None:intergenic | 40.0% | |
| ATCATGGGATGAATAGCAGA+TGG | - | chr4.2:18948799-18948818 | None:intergenic | 40.0% | |
| ATCCAATGTCCACAAAAAGG+TGG | - | chr4.2:18948610-18948629 | None:intergenic | 40.0% | |
| ATGGAGGTCTACAAAAGTGA+TGG | + | chr4.2:18948039-18948058 | MS.gene36146:CDS | 40.0% | |
| CAGAAGCCTGTTGGAAAAAA+TGG | + | chr4.2:18946259-18946278 | MS.gene36146:CDS | 40.0% | |
| CTACTTACCTCCTCAAAAAG+TGG | + | chr4.2:18947397-18947416 | MS.gene36146:intron | 40.0% | |
| CTGCTATTCATCCCATGATA+TGG | + | chr4.2:18948800-18948819 | MS.gene36146:intron | 40.0% | |
| GAAGGCAACGCAATATTACT+TGG | - | chr4.2:18947818-18947837 | None:intergenic | 40.0% | |
| GATGAAGTAGCGAAAGAAGA+AGG | - | chr4.2:18946217-18946236 | None:intergenic | 40.0% | |
| GGAAGACACAGAATAATGAC+TGG | - | chr4.2:18948548-18948567 | None:intergenic | 40.0% | |
| GTCTCTTTATGTGGATCAGA+AGG | - | chr4.2:18948703-18948722 | None:intergenic | 40.0% | |
| GTGAACCTCCCTTAAAAATG+CGG | - | chr4.2:18949465-18949484 | None:intergenic | 40.0% | |
| GTTAGTATTAGACGGTTCCT+CGG | - | chr4.2:18949413-18949432 | None:intergenic | 40.0% | |
| TAAAACTTACGCCGTTCATG+TGG | - | chr4.2:18946366-18946385 | None:intergenic | 40.0% | |
| TAAAAGAAGCAGGCCTTCAT+GGG | + | chr4.2:18948016-18948035 | MS.gene36146:CDS | 40.0% | |
| TAATGACTGGTGCATTCACT+TGG | - | chr4.2:18948535-18948554 | None:intergenic | 40.0% | |
| TATCAAAGATCGCGACACAA+GGG | - | chr4.2:18948911-18948930 | None:intergenic | 40.0% | |
| TATGATCAACCACTAAGCCT+AGG | - | chr4.2:18948735-18948754 | None:intergenic | 40.0% | |
| TCCAATGTCCACAAAAAGGT+GGG | - | chr4.2:18948609-18948628 | None:intergenic | 40.0% | |
| TCTGACAGATCACGATACTA+TGG | + | chr4.2:18946952-18946971 | MS.gene36146:CDS | 40.0% | |
| TCTTGGCTACTTAACCAAAG+AGG | - | chr4.2:18949526-18949545 | None:intergenic | 40.0% | |
| TGAACCTCCCTTAAAAATGC+GGG | - | chr4.2:18949464-18949483 | None:intergenic | 40.0% | |
| TGTAGAACCAAACATGCACT+TGG | - | chr4.2:18947180-18947199 | None:intergenic | 40.0% | |
| TGTCACTCTAAATGCAGTGA+TGG | + | chr4.2:18946307-18946326 | MS.gene36146:CDS | 40.0% | |
| TTAAAAGAAGCAGGCCTTCA+TGG | + | chr4.2:18948015-18948034 | MS.gene36146:CDS | 40.0% | |
| TTAAGGTAGCTAGGCCTATA+TGG | + | chr4.2:18949353-18949372 | MS.gene36146:CDS | 40.0% | |
| TTCACCCTTGTATTGTGGAA+AGG | + | chr4.2:18949480-18949499 | MS.gene36146:CDS | 40.0% | |
| TTGGTTAAGTAGCCAAGAGA+TGG | + | chr4.2:18949528-18949547 | MS.gene36146:CDS | 40.0% | |
| ! | AGGTCTACAAAAGTGATGGA+AGG | + | chr4.2:18948043-18948062 | MS.gene36146:CDS | 40.0% |
| ! | ATTATTGGAGTGTTATGCCG+AGG | + | chr4.2:18949393-18949412 | MS.gene36146:CDS | 40.0% |
| ! | CATGCAAAACTAGTACTGGA+AGG | - | chr4.2:18949327-18949346 | None:intergenic | 40.0% |
| ! | CTGACCCTCCAATTTTCAAA+AGG | - | chr4.2:18949255-18949274 | None:intergenic | 40.0% |
| ! | GATGACCCATGAACAAGTTT+TGG | + | chr4.2:18946153-18946172 | MS.gene36146:CDS | 40.0% |
| ! | TCCAATTTTCAAAAGGCCGT+AGG | - | chr4.2:18949248-18949267 | None:intergenic | 40.0% |
| ! | TGGCTTTTTGTCTCCTTCTA+AGG | + | chr4.2:18946327-18946346 | MS.gene36146:CDS | 40.0% |
| !! | AAGTGCATGTTTGGTTCTAC+AGG | + | chr4.2:18947179-18947198 | MS.gene36146:intron | 40.0% |
| !! | ACGGCCTTTTGAAAATTGGA+GGG | + | chr4.2:18949248-18949267 | MS.gene36146:CDS | 40.0% |
| !! | AGTGCATGTTTGGTTCTACA+GGG | + | chr4.2:18947180-18947199 | MS.gene36146:intron | 40.0% |
| !! | GCAAGAAGCATCCATATCAT+GGG | - | chr4.2:18948814-18948833 | None:intergenic | 40.0% |
| !! | GCCTCTAAAATAAGTGGAGA+TGG | + | chr4.2:18946788-18946807 | MS.gene36146:intron | 40.0% |
| !! | GTAGAGGCCTCTAAAATAAG+TGG | + | chr4.2:18946782-18946801 | MS.gene36146:intron | 40.0% |
| !! | TACGGCCTTTTGAAAATTGG+AGG | + | chr4.2:18949247-18949266 | MS.gene36146:CDS | 40.0% |
| !!! | CGGAATCAGGGTTTTAAATG+GGG | + | chr4.2:18948869-18948888 | MS.gene36146:intron | 40.0% |
| !!! | CTCGGAATCAGGGTTTTAAA+TGG | + | chr4.2:18948867-18948886 | MS.gene36146:intron | 40.0% |
| !!! | CTGTCACCATTTTTTCCAAC+AGG | - | chr4.2:18946268-18946287 | None:intergenic | 40.0% |
| !!! | GGAATCAGGGTTTTAAATGG+GGG | + | chr4.2:18948870-18948889 | MS.gene36146:intron | 40.0% |
| !!! | TTTGGTTCCACTTTTTGAGG+AGG | - | chr4.2:18947407-18947426 | None:intergenic | 40.0% |
| AACCTGCTTCAACCATAGCA+CGG | - | chr4.2:18947735-18947754 | None:intergenic | 45.0% | |
| ACAGATCACGATACTATGGC+AGG | + | chr4.2:18946956-18946975 | MS.gene36146:CDS | 45.0% | |
| AGGACACCATGAATCTGAAC+TGG | + | chr4.2:18949291-18949310 | MS.gene36146:CDS | 45.0% | |
| ATTGGAGGGTCAGACTATCA+TGG | + | chr4.2:18949262-18949281 | MS.gene36146:CDS | 45.0% | |
| CACTTCCCAGTTCAGATTCA+TGG | - | chr4.2:18949300-18949319 | None:intergenic | 45.0% | |
| CCAATGTCCACAAAAAGGTG+GGG | - | chr4.2:18948608-18948627 | None:intergenic | 45.0% | |
| CTTGTGTTGCCTCTAACTAG+AGG | + | chr4.2:18947120-18947139 | MS.gene36146:intron | 45.0% | |
| GAGACGTAGTAGGCAGTATT+CGG | - | chr4.2:18949103-18949122 | None:intergenic | 45.0% | |
| GAGCATGTTTGTAGGATTGC+AGG | + | chr4.2:18947676-18947695 | MS.gene36146:CDS | 45.0% | |
| GCTCTCTCAACAACCTTAGA+AGG | - | chr4.2:18946343-18946362 | None:intergenic | 45.0% | |
| GGACACCATGAATCTGAACT+GGG | + | chr4.2:18949292-18949311 | MS.gene36146:CDS | 45.0% | |
| GTATGCAGCATATAGTGACC+TGG | + | chr4.2:18949216-18949235 | MS.gene36146:intron | 45.0% | |
| GTTTGTAGGATTGCAGGCAA+CGG | + | chr4.2:18947682-18947701 | MS.gene36146:CDS | 45.0% | |
| TCAGACTATCATGGAAGAGG+AGG | + | chr4.2:18949271-18949290 | MS.gene36146:CDS | 45.0% | |
| TCCAACGTTTCTACCAGTCA+GGG | + | chr4.2:18949586-18949605 | MS.gene36146:CDS | 45.0% | |
| TCTGATGTTTGCCCATCTAC+TGG | + | chr4.2:18947475-18947494 | MS.gene36146:intron | 45.0% | |
| TGGGCAAACATCAGAACCAA+TGG | - | chr4.2:18947470-18947489 | None:intergenic | 45.0% | |
| TGTATGAAGCCTAGGCTTAG+TGG | + | chr4.2:18948723-18948742 | MS.gene36146:intron | 45.0% | |
| TGTTGCCTCTAACTAGAGGA+GGG | + | chr4.2:18947124-18947143 | MS.gene36146:intron | 45.0% | |
| TTCCAACGTTTCTACCAGTC+AGG | + | chr4.2:18949585-18949604 | MS.gene36146:CDS | 45.0% | |
| TTTAAGGATGGTGTGGCTGA+TGG | + | chr4.2:18946744-18946763 | MS.gene36146:intron | 45.0% | |
| TTTATTGCTTCCTCCACCAC+AGG | - | chr4.2:18947916-18947935 | None:intergenic | 45.0% | |
| ! | AAAAGTGATGGAAGGCTTGC+AGG | + | chr4.2:18948051-18948070 | MS.gene36146:CDS | 45.0% |
| ! | GCCCGATATCTTTTTGATGG+TGG | + | chr4.2:18947781-18947800 | MS.gene36146:CDS | 45.0% |
| ! | GGGAGAACCCGCATTTTTAA+GGG | + | chr4.2:18949454-18949473 | MS.gene36146:CDS | 45.0% |
| ! | TGGGAGAACCCGCATTTTTA+AGG | + | chr4.2:18949453-18949472 | MS.gene36146:CDS | 45.0% |
| !! | AGAACCCGCATTTTTAAGGG+AGG | + | chr4.2:18949457-18949476 | MS.gene36146:CDS | 45.0% |
| !! | ATGGTTAGCCTCTATCTCAC+CGG | - | chr4.2:18949032-18949051 | None:intergenic | 45.0% |
| !! | GCCTACGGCCTTTTGAAAAT+TGG | + | chr4.2:18949244-18949263 | MS.gene36146:CDS | 45.0% |
| !! | GGCAAGAAGCATCCATATCA+TGG | - | chr4.2:18948815-18948834 | None:intergenic | 45.0% |
| !! | GTAGAATCGGCTCGCAAATA+TGG | + | chr4.2:18946992-18947011 | MS.gene36146:CDS | 45.0% |
| AACGTTTCTACCAGTCAGGG+AGG | + | chr4.2:18949589-18949608 | MS.gene36146:CDS | 50.0% | |
| ACCTGCTTCAACCATAGCAC+GGG | - | chr4.2:18947734-18947753 | None:intergenic | 50.0% | |
| ACTCATCACTACCGCCAACT+TGG | + | chr4.2:18949001-18949020 | MS.gene36146:intron | 50.0% | |
| CTCATCACTACCGCCAACTT+GGG | + | chr4.2:18949002-18949021 | MS.gene36146:intron | 50.0% | |
| GGAGGTTCACCCTTGTATTG+TGG | + | chr4.2:18949475-18949494 | MS.gene36146:CDS | 50.0% | |
| GGGTCAGACTATCATGGAAG+AGG | + | chr4.2:18949268-18949287 | MS.gene36146:CDS | 50.0% | |
| GTGTTGCCTCTAACTAGAGG+AGG | + | chr4.2:18947123-18947142 | MS.gene36146:intron | 50.0% | |
| GTTGAGAGAGCCCACATGAA+CGG | + | chr4.2:18946352-18946371 | MS.gene36146:CDS | 50.0% | |
| GTTGCCTCTAACTAGAGGAG+GGG | + | chr4.2:18947125-18947144 | MS.gene36146:intron | 50.0% | |
| TCCCTGACTGGTAGAAACGT+TGG | - | chr4.2:18949590-18949609 | None:intergenic | 50.0% | |
| TGTAGACCTCCATCCCATGA+AGG | - | chr4.2:18948032-18948051 | None:intergenic | 50.0% | |
| TTGCCTCTAACTAGAGGAGG+GGG | + | chr4.2:18947126-18947145 | MS.gene36146:intron | 50.0% | |
| TTTCAGGGGAAGTGAACCTG+TGG | + | chr4.2:18947897-18947916 | MS.gene36146:intron | 50.0% | |
| ! | CCCCACCTTTTTGTGGACAT+TGG | + | chr4.2:18948605-18948624 | MS.gene36146:intron | 50.0% |
| ! | TGCACTACCCCACCTTTTTG+TGG | + | chr4.2:18948598-18948617 | MS.gene36146:intron | 50.0% |
| AGAAGCAGGCCTTCATGGGA+TGG | + | chr4.2:18948020-18948039 | MS.gene36146:CDS | 55.0% | |
| AGTGACCTGGCTGATGCCTA+CGG | + | chr4.2:18949229-18949248 | MS.gene36146:CDS | 55.0% | |
| CATCCCCGAGGCTGTAGAAT+CGG | + | chr4.2:18946979-18946998 | MS.gene36146:CDS | 55.0% | |
| CTCCACCACTGCCAGTAGAT+GGG | - | chr4.2:18947489-18947508 | None:intergenic | 55.0% | |
| GTTTGCCCATCTACTGGCAG+TGG | + | chr4.2:18947481-18947500 | MS.gene36146:intron | 55.0% | |
| TACCAGTCAGGGAGGAACTC+CGG | + | chr4.2:18949597-18949616 | MS.gene36146:CDS | 55.0% | |
| TCTCCACCACTGCCAGTAGA+TGG | - | chr4.2:18947490-18947509 | None:intergenic | 55.0% | |
| TGCCCATGGATGAGCCAGAA+CGG | - | chr4.2:18947965-18947984 | None:intergenic | 55.0% | |
| TGCCTCTAACTAGAGGAGGG+GGG | + | chr4.2:18947127-18947146 | MS.gene36146:intron | 55.0% | |
| TGGTGGAGACACTGAAGCAG+AGG | + | chr4.2:18947501-18947520 | MS.gene36146:CDS | 55.0% | |
| TTCCCCCCTCCTCTAGTTAG+AGG | - | chr4.2:18947132-18947151 | None:intergenic | 55.0% | |
| ! | CAACCATAGCACGGGCTACA+TGG | - | chr4.2:18947726-18947745 | None:intergenic | 55.0% |
| ! | TTTGGGGTGCAGAAGCCTGT+TGG | + | chr4.2:18946250-18946269 | MS.gene36146:CDS | 55.0% |
| !! | TGCCGTTCTGGCTCATCCAT+GGG | + | chr4.2:18947960-18947979 | MS.gene36146:CDS | 55.0% |
| !! | TTGCCGTTCTGGCTCATCCA+TGG | + | chr4.2:18947959-18947978 | MS.gene36146:CDS | 55.0% |
| AAAGGCCGTAGGCATCAGCC+AGG | - | chr4.2:18949237-18949256 | None:intergenic | 60.0% | |
| AACCGGAGTTCCTCCCTGAC+TGG | - | chr4.2:18949602-18949621 | None:intergenic | 60.0% | |
| AGCAGGCCTTCATGGGATGG+AGG | + | chr4.2:18948023-18948042 | MS.gene36146:CDS | 60.0% | |
| CAGGGGAAGTGAACCTGTGG+TGG | + | chr4.2:18947900-18947919 | MS.gene36146:intron | 60.0% | |
| GCCCGTGCTATGGTTGAAGC+AGG | + | chr4.2:18947730-18947749 | MS.gene36146:CDS | 60.0% | |
| GCTCCATGTAGCCCGTGCTA+TGG | + | chr4.2:18947720-18947739 | MS.gene36146:CDS | 60.0% | |
| GGGAAGTGAACCTGTGGTGG+AGG | + | chr4.2:18947903-18947922 | MS.gene36146:CDS | 60.0% | |
| TACTATGGCAGGCATCCCCG+AGG | + | chr4.2:18946967-18946986 | MS.gene36146:CDS | 60.0% | |
| TGCCCATCTACTGGCAGTGG+TGG | + | chr4.2:18947484-18947503 | MS.gene36146:intron | 60.0% | |
| ! | ACGGGCTACATGGAGCCTTC+CGG | - | chr4.2:18947716-18947735 | None:intergenic | 60.0% |
| ! | CGAGCCGATTCTACAGCCTC+GGG | - | chr4.2:18946986-18947005 | None:intergenic | 60.0% |
| ! | GAGCCGATTCTACAGCCTCG+GGG | - | chr4.2:18946985-18947004 | None:intergenic | 60.0% |
| ! | GCGAGCCGATTCTACAGCCT+CGG | - | chr4.2:18946987-18947006 | None:intergenic | 60.0% |
| ! | TCTCACCGGCTAGCCCAAGT+TGG | - | chr4.2:18949018-18949037 | None:intergenic | 60.0% |
| !! | TACCGCCAACTTGGGCTAGC+CGG | + | chr4.2:18949010-18949029 | MS.gene36146:intron | 60.0% |
| !! | TACTGGGGGTGTTGCCGTTC+TGG | + | chr4.2:18947948-18947967 | MS.gene36146:CDS | 60.0% |
| !! | TGGGCTAGCCGGTGAGATAG+AGG | + | chr4.2:18949021-18949040 | MS.gene36146:intron | 60.0% |
| CGGGCTACATGGAGCCTTCC+GGG | - | chr4.2:18947715-18947734 | None:intergenic | 65.0% | |
| GCAACGGAGTTGCTCCCGGA+AGG | + | chr4.2:18947698-18947717 | MS.gene36146:CDS | 65.0% | |
| GCAGGCAACGGAGTTGCTCC+CGG | + | chr4.2:18947694-18947713 | MS.gene36146:CDS | 65.0% | |
| ! | CACCGGCTAGCCCAAGTTGG+CGG | - | chr4.2:18949015-18949034 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 18946049 | 18949636 | 18946049 | ID=MS.gene36146 |
| chr4.2 | mRNA | 18946049 | 18949636 | 18946049 | ID=MS.gene36146.t1;Parent=MS.gene36146 |
| chr4.2 | exon | 18946049 | 18946375 | 18946049 | ID=MS.gene36146.t1.exon1;Parent=MS.gene36146.t1 |
| chr4.2 | CDS | 18946049 | 18946375 | 18946049 | ID=cds.MS.gene36146.t1;Parent=MS.gene36146.t1 |
| chr4.2 | exon | 18946938 | 18947062 | 18946938 | ID=MS.gene36146.t1.exon2;Parent=MS.gene36146.t1 |
| chr4.2 | CDS | 18946938 | 18947062 | 18946938 | ID=cds.MS.gene36146.t1;Parent=MS.gene36146.t1 |
| chr4.2 | exon | 18947501 | 18947818 | 18947501 | ID=MS.gene36146.t1.exon3;Parent=MS.gene36146.t1 |
| chr4.2 | CDS | 18947501 | 18947818 | 18947501 | ID=cds.MS.gene36146.t1;Parent=MS.gene36146.t1 |
| chr4.2 | exon | 18947903 | 18948072 | 18947903 | ID=MS.gene36146.t1.exon4;Parent=MS.gene36146.t1 |
| chr4.2 | CDS | 18947903 | 18948072 | 18947903 | ID=cds.MS.gene36146.t1;Parent=MS.gene36146.t1 |
| chr4.2 | exon | 18949224 | 18949636 | 18949224 | ID=MS.gene36146.t1.exon5;Parent=MS.gene36146.t1 |
| chr4.2 | CDS | 18949224 | 18949636 | 18949224 | ID=cds.MS.gene36146.t1;Parent=MS.gene36146.t1 |
| Gene Sequence |
| Protein sequence |
