Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37276.t1 | XP_013467673.1 | 97.6 | 295 | 7 | 0 | 1 | 295 | 3 | 297 | 2.80E-156 | 561.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37276.t1 | Q8S9M1 | 67.1 | 277 | 86 | 3 | 23 | 295 | 24 | 299 | 2.3e-98 | 360.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37276.t1 | I3SSW0 | 97.6 | 295 | 7 | 0 | 1 | 295 | 3 | 297 | 2.0e-156 | 561.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene37276 | 0.824492 | 7.84E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene37276 | 0.812474 | 4.16E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene37276 | 0.806092 | 9.73E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene37276 | 0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene37276 | 0.826624 | 2.45E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene37276 | 0.811635 | 6.34E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene37276 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene37276 | 0.819703 | 1.01E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene37276 | 0.869436 | 3.10E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene37276 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene37276 | 0.836229 | 1.06E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene37276 | 0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene37276 | 0.830379 | 3.04E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene37276 | 0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene37276 | 0.821268 | 4.42E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene37276 | 0.825493 | 4.55E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene37276 | 0.811297 | 7.51E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene37276 | 0.808708 | 2.71E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene37276 | 0.842697 | 2.21E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene37276 | 0.818387 | 2.01E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene37276 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene37276 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene37276 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene37276 | 0.818746 | 1.67E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene37276 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene37276 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene37276 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene057086 | MS.gene37276 | 0.831099 | 2.02E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene37276 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene37276 | 0.850935 | 1.23E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene37276 | 0.858347 | 8.77E-63 | -1.69E-46 |
| MS.gene057826 | MS.gene37276 | 0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene057845 | MS.gene37276 | 0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene37276 | 0.843935 | 1.03E-58 | -1.69E-46 |
| MS.gene058006 | MS.gene37276 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene37276 | 0.820762 | 5.78E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene37276 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene37276 | 0.839792 | 1.28E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene37276 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene37276 | 0.812457 | 4.20E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene37276 | 0.817234 | 3.66E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene37276 | 0.819527 | 1.11E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene37276 | 0.81994 | 8.92E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene37276 | 0.804488 | 2.11E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene37276 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene37276 | 0.840362 | 9.10E-58 | -1.69E-46 |
| MS.gene060485 | MS.gene37276 | 0.816173 | 6.34E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene37276 | 0.80499 | 1.66E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene37276 | 0.820664 | 6.09E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37276 | MS.gene37079 | PPI |
| MS.gene000110 | MS.gene37276 | PPI |
| MS.gene37276 | MS.gene034498 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37276.t1 | MTR_1g054070 | 97.627 | 295 | 7 | 0 | 1 | 295 | 3 | 297 | 0.0 | 589 |
| MS.gene37276.t1 | MTR_1g054070 | 95.254 | 295 | 7 | 1 | 1 | 295 | 3 | 290 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37276.t1 | AT2G42130 | 67.626 | 278 | 83 | 4 | 23 | 295 | 24 | 299 | 2.27e-132 | 377 |
| MS.gene37276.t1 | AT3G58010 | 68.443 | 244 | 74 | 2 | 39 | 280 | 48 | 290 | 3.26e-126 | 362 |
| MS.gene37276.t1 | AT3G58010 | 68.443 | 244 | 74 | 2 | 39 | 280 | 48 | 290 | 3.26e-126 | 362 |
| MS.gene37276.t1 | AT2G42130 | 66.300 | 273 | 67 | 4 | 46 | 295 | 1 | 271 | 2.57e-125 | 358 |
| MS.gene37276.t1 | AT2G42130 | 70.040 | 247 | 68 | 3 | 23 | 264 | 24 | 269 | 7.84e-122 | 350 |
| MS.gene37276.t1 | AT2G42130 | 66.807 | 238 | 73 | 3 | 23 | 255 | 24 | 260 | 1.70e-109 | 318 |
| MS.gene37276.t1 | AT2G42130 | 71.078 | 204 | 58 | 1 | 92 | 295 | 2 | 204 | 8.33e-106 | 306 |
Find 71 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCCTTCATCTTCTTCA+TGG | 0.258486 | 1.2:-39940973 | MS.gene37276:CDS |
| TTCTTAGTCTCTTACGTTGT+GGG | 0.278150 | 1.2:+39939847 | None:intergenic |
| TCGAGTCTCGTTAAAACTTC+TGG | 0.337043 | 1.2:+39937042 | None:intergenic |
| CGATGGAACTTTGAGTGGTT+TGG | 0.345387 | 1.2:-39939742 | MS.gene37276:CDS |
| CGATGCATCGCCGTCATCCC+TGG | 0.349723 | 1.2:-39937022 | MS.gene37276:CDS |
| TGGTTTGGTCCCGGATCTCC+CGG | 0.349816 | 1.2:-39939727 | MS.gene37276:CDS |
| TGGTTCTGATGCAGATAATA+AGG | 0.361190 | 1.2:-39937080 | MS.gene37276:intron |
| AACACCTAGCTTTCATAATC+TGG | 0.372388 | 1.2:+39936988 | None:intergenic |
| TGCAAACAACCCGGGAGATC+CGG | 0.376914 | 1.2:+39939717 | None:intergenic |
| TACGTTGTGGGCCGAGGTGT+TGG | 0.377460 | 1.2:+39939859 | None:intergenic |
| GACAAATTAGCTAAACTTGA+AGG | 0.384219 | 1.2:+39939537 | None:intergenic |
| AGAGTTCCAGATCAGCTTAA+AGG | 0.395182 | 1.2:-39939004 | MS.gene37276:CDS |
| GATGTGAATGAAAGGATAAC+TGG | 0.412353 | 1.2:-39939898 | MS.gene37276:CDS |
| TGCTGCTTATGCTAAGGAAA+TGG | 0.412492 | 1.2:-39940873 | MS.gene37276:CDS |
| GTCTCTTACGTTGTGGGCCG+AGG | 0.413534 | 1.2:+39939853 | None:intergenic |
| AGTGCACCTTTAAGCTGATC+TGG | 0.440569 | 1.2:+39938998 | None:intergenic |
| TGGCCCCTCCACAGTTAACT+TGG | 0.446873 | 1.2:+39939087 | None:intergenic |
| AACTTTGAGTGGTTTGGTCC+CGG | 0.448840 | 1.2:-39939736 | MS.gene37276:CDS |
| TACAGGTCACCCTTTCTAGA+AGG | 0.454407 | 1.2:-39939766 | MS.gene37276:intron |
| TATTGTGTCACCAACAGTCT+TGG | 0.471270 | 1.2:-39939032 | MS.gene37276:CDS |
| GCAAACAACCCGGGAGATCC+GGG | 0.477403 | 1.2:+39939718 | None:intergenic |
| GCTTAAAGGTGCACTTGGGC+AGG | 0.488898 | 1.2:-39938990 | MS.gene37276:CDS |
| AAGCTGTTGTAAAACATTAA+CGG | 0.490678 | 1.2:+39938967 | None:intergenic |
| CTCCCGGGTTGTTTGCAGCT+AGG | 0.494564 | 1.2:-39939711 | MS.gene37276:CDS |
| ATGGATGTCTTTATCAAGGA+TGG | 0.497103 | 1.2:-39939510 | MS.gene37276:CDS |
| TTACGTGATGCTCTCGCCGA+TGG | 0.498253 | 1.2:-39938935 | MS.gene37276:CDS |
| TACTCCTCTTTCATTCTAAG+TGG | 0.499661 | 1.2:+39939067 | None:intergenic |
| TTCCATCGACCTTCTAGAAA+GGG | 0.507609 | 1.2:+39939757 | None:intergenic |
| TGAAAGAGGAGTATGTGGAA+GGG | 0.508535 | 1.2:-39939057 | MS.gene37276:CDS |
| GAAGCGATTCTTTAGCAGAA+AGG | 0.509807 | 1.2:+39940846 | None:intergenic |
| GTTCCATCGACCTTCTAGAA+AGG | 0.510788 | 1.2:+39939756 | None:intergenic |
| GATCAGCTTAAAGGTGCACT+TGG | 0.514009 | 1.2:-39938995 | MS.gene37276:CDS |
| ATGAAAGAGGAGTATGTGGA+AGG | 0.518572 | 1.2:-39939058 | MS.gene37276:CDS |
| GCTATGGTTCAAGTTCAAAC+TGG | 0.521173 | 1.2:-39940902 | MS.gene37276:CDS |
| CGCATCACGTGGCAGAAGCG+TGG | 0.523439 | 1.2:-39940935 | MS.gene37276:CDS |
| CAGATAATAAGGAACACAGC+TGG | 0.524577 | 1.2:-39937069 | MS.gene37276:CDS |
| AATCTGGACTTGATTCTCCC+AGG | 0.529092 | 1.2:+39937004 | None:intergenic |
| GCGTGGGTGTTGCAGAGCTA+TGG | 0.530484 | 1.2:-39940918 | MS.gene37276:CDS |
| AAGTCCAGATTATGAAAGCT+AGG | 0.531868 | 1.2:-39936992 | None:intergenic |
| TCAACCAAGTTAACTGTGGA+GGG | 0.536332 | 1.2:-39939091 | MS.gene37276:CDS |
| ATTTCCTTAGCATAAGCAGC+AGG | 0.537111 | 1.2:+39940875 | None:intergenic |
| AAAGAATTGATGTGAATGAA+AGG | 0.540601 | 1.2:-39939906 | MS.gene37276:CDS |
| CTTGATTCTCCCAGGGATGA+CGG | 0.547658 | 1.2:+39937012 | None:intergenic |
| GATGCATCGCCGTCATCCCT+GGG | 0.548574 | 1.2:-39937021 | MS.gene37276:CDS |
| TAGAATGAAAGAGGAGTATG+TGG | 0.549259 | 1.2:-39939062 | MS.gene37276:CDS |
| TACGTGATGCTCTCGCCGAT+GGG | 0.553971 | 1.2:-39938934 | MS.gene37276:CDS |
| ATCTGGACTTGATTCTCCCA+GGG | 0.556575 | 1.2:+39937005 | None:intergenic |
| CACCCTTTCTAGAAGGTCGA+TGG | 0.556922 | 1.2:-39939759 | MS.gene37276:CDS |
| AGAGCATCACGTAAAGGTAC+GGG | 0.563086 | 1.2:+39938944 | None:intergenic |
| ACTTTCCATGAAGAAGATGA+AGG | 0.563489 | 1.2:+39940968 | None:intergenic |
| CTCAACCAAGTTAACTGTGG+AGG | 0.564278 | 1.2:-39939092 | MS.gene37276:CDS |
| TATCCTAGCTGCAAACAACC+CGG | 0.564632 | 1.2:+39939708 | None:intergenic |
| GGTTTGGTCCCGGATCTCCC+GGG | 0.565476 | 1.2:-39939726 | MS.gene37276:CDS |
| GAGAGCATCACGTAAAGGTA+CGG | 0.569225 | 1.2:+39938943 | None:intergenic |
| AAGGTCGATGGAACTTTGAG+TGG | 0.570543 | 1.2:-39939747 | MS.gene37276:CDS |
| GCATCACGTGGCAGAAGCGT+GGG | 0.572199 | 1.2:-39940934 | MS.gene37276:CDS |
| AGATAATAAGGAACACAGCT+GGG | 0.572812 | 1.2:-39937068 | MS.gene37276:CDS |
| CATGATTTCTTATCTCGATG+AGG | 0.578981 | 1.2:-39938419 | MS.gene37276:CDS |
| TCGGCGAGAGCATCACGTAA+AGG | 0.589648 | 1.2:+39938938 | None:intergenic |
| GGGGCCACTTAGAATGAAAG+AGG | 0.591481 | 1.2:-39939071 | MS.gene37276:CDS |
| ATCCTAGCTGCAAACAACCC+GGG | 0.603680 | 1.2:+39939709 | None:intergenic |
| TTTCAGTTTAAGGATGCAGG+TGG | 0.612143 | 1.2:-39939967 | MS.gene37276:intron |
| ACTCTGTCTTCCAAGACTGT+TGG | 0.616520 | 1.2:+39939022 | None:intergenic |
| TGCACCTGCTGCTTATGCTA+AGG | 0.621082 | 1.2:-39940879 | MS.gene37276:CDS |
| TTTGTGATTGTTGAAATACA+AGG | 0.627714 | 1.2:+39941001 | None:intergenic |
| ATCAGCTTAAAGGTGCACTT+GGG | 0.627941 | 1.2:-39938994 | MS.gene37276:CDS |
| CAACCAAGTTAACTGTGGAG+GGG | 0.634924 | 1.2:-39939090 | MS.gene37276:CDS |
| TCTCTCAACCAAGTTAACTG+TGG | 0.636429 | 1.2:-39939095 | MS.gene37276:CDS |
| AAAGGATAACTGGTCTTGAG+CGG | 0.638722 | 1.2:-39939888 | MS.gene37276:CDS |
| TTTCAACTTCACGCATCACG+TGG | 0.646833 | 1.2:-39940946 | MS.gene37276:CDS |
| AGCGGCTCAATCCAACACCT+CGG | 0.670774 | 1.2:-39939870 | MS.gene37276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATCTGTTAAATAT+TGG | - | chr1.2:39939198-39939217 | MS.gene37276:intron | 10.0% |
| !! | ATTAACAAAAATTAAAACAA+TGG | + | chr1.2:39937266-39937285 | None:intergenic | 10.0% |
| !! | TTAACAAAAATTAAAACAAT+GGG | + | chr1.2:39937265-39937284 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTTTCATTTTAAT+AGG | - | chr1.2:39940860-39940879 | MS.gene37276:CDS | 10.0% |
| !!! | TTTGTTAATTTATTTAGTTT+TGG | - | chr1.2:39937277-39937296 | MS.gene37276:intron | 10.0% |
| !!! | TTTTAATTGAAAAAACTTAT+AGG | + | chr1.2:39938796-39938815 | None:intergenic | 10.0% |
| !! | CAATTTAGTATGAAAAAATA+TGG | + | chr1.2:39940318-39940337 | None:intergenic | 15.0% |
| !! | TAACAAAAATTAAAACAATG+GGG | + | chr1.2:39937264-39937283 | None:intergenic | 15.0% |
| !!! | AAACACATTATTTTTAAACT+CGG | - | chr1.2:39938558-39938577 | MS.gene37276:intron | 15.0% |
| !!! | AATTTTAAACAAAGTATGAA+AGG | + | chr1.2:39938875-39938894 | None:intergenic | 15.0% |
| !!! | GTTTTAATTTTTTGTATGTT+TGG | - | chr1.2:39937301-39937320 | MS.gene37276:intron | 15.0% |
| !!! | TGAAATAATTTTACTTTATG+TGG | + | chr1.2:39938690-39938709 | None:intergenic | 15.0% |
| !!! | TTCAAATTGATTTTAGTAAA+TGG | + | chr1.2:39940569-39940588 | None:intergenic | 15.0% |
| !!! | TTCTTTTACATAATGATTTT+CGG | - | chr1.2:39938651-39938670 | MS.gene37276:intron | 15.0% |
| !! | ATATACATTCATGTAAAAGT+GGG | + | chr1.2:39937596-39937615 | None:intergenic | 20.0% |
| !! | ATTATAACCCTTGTATAAAT+TGG | + | chr1.2:39937743-39937762 | None:intergenic | 20.0% |
| !! | ATTGAAAACCAATTTATACA+AGG | - | chr1.2:39937732-39937751 | MS.gene37276:intron | 20.0% |
| !! | GAGATAATTATAGGTAAAAA+TGG | + | chr1.2:39940898-39940917 | None:intergenic | 20.0% |
| !! | TATATACATTCATGTAAAAG+TGG | + | chr1.2:39937597-39937616 | None:intergenic | 20.0% |
| !! | TGATTAAATTATTGCATGTT+TGG | + | chr1.2:39937710-39937729 | None:intergenic | 20.0% |
| !! | TTATTCAAAAAGCTTAGAAA+TGG | + | chr1.2:39938209-39938228 | None:intergenic | 20.0% |
| !! | TTATTTCAACATTTCTTGTT+AGG | - | chr1.2:39938702-39938721 | MS.gene37276:intron | 20.0% |
| !! | TTCACTGATAAAATAATCAT+TGG | - | chr1.2:39939279-39939298 | MS.gene37276:intron | 20.0% |
| !! | TTGAAAACCAATTTATACAA+GGG | - | chr1.2:39937733-39937752 | MS.gene37276:intron | 20.0% |
| !!! | AATCAACTTCATTTTATTCT+TGG | + | chr1.2:39937964-39937983 | None:intergenic | 20.0% |
| !!! | TTTAGCTAATTTGTCAAAAA+TGG | - | chr1.2:39938498-39938517 | MS.gene37276:intron | 20.0% |
| ! | AAAAATGGATGTCTTTATCA+AGG | - | chr1.2:39938513-39938532 | MS.gene37276:intron | 25.0% |
| ! | AAAGAATTGATGTGAATGAA+AGG | - | chr1.2:39938121-39938140 | MS.gene37276:intron | 25.0% |
| ! | AAATACTGTTTATAAGTGGA+AGG | + | chr1.2:39940052-39940071 | None:intergenic | 25.0% |
| ! | AAGAGAACAATAAGAAATGT+TGG | - | chr1.2:39939393-39939412 | MS.gene37276:intron | 25.0% |
| ! | AAGCTGTTGTAAAACATTAA+CGG | + | chr1.2:39939063-39939082 | None:intergenic | 25.0% |
| ! | AATAACAGTTACAAGTAATG+AGG | - | chr1.2:39937781-39937800 | MS.gene37276:intron | 25.0% |
| ! | AATAATCCAAAAAATGAAGC+AGG | + | chr1.2:39937235-39937254 | None:intergenic | 25.0% |
| ! | ATAAAGTTAGGAGGATATAT+AGG | + | chr1.2:39940605-39940624 | None:intergenic | 25.0% |
| ! | ATTAACACATGATACTATTG+AGG | + | chr1.2:39940488-39940507 | None:intergenic | 25.0% |
| ! | ATTGAAAAAACTTATAGGCA+TGG | + | chr1.2:39938791-39938810 | None:intergenic | 25.0% |
| ! | CACTTATAAACAGTATTTCA+GGG | - | chr1.2:39940054-39940073 | MS.gene37276:intron | 25.0% |
| ! | CCTATAATTATCTCAAATCA+TGG | - | chr1.2:39940904-39940923 | MS.gene37276:CDS | 25.0% |
| ! | GAATTACAACAGATTTACAT+CGG | + | chr1.2:39940760-39940779 | None:intergenic | 25.0% |
| ! | TAATATCTGAATGATTATGC+TGG | - | chr1.2:39940927-39940946 | MS.gene37276:CDS | 25.0% |
| ! | TATTGTGATATGATAGCTAA+AGG | - | chr1.2:39937804-39937823 | MS.gene37276:intron | 25.0% |
| ! | TTTCATCTAGCTATAAAGTT+AGG | + | chr1.2:39940617-39940636 | None:intergenic | 25.0% |
| ! | TTTGTGATTGTTGAAATACA+AGG | + | chr1.2:39937029-39937048 | None:intergenic | 25.0% |
| !! | AGCTTTTTGAATAAGATGTA+AGG | - | chr1.2:39938215-39938234 | MS.gene37276:intron | 25.0% |
| !! | CCATGATTTGAGATAATTAT+AGG | + | chr1.2:39940907-39940926 | None:intergenic | 25.0% |
| !! | CGGCAAATATATACTTTTAT+TGG | + | chr1.2:39940740-39940759 | None:intergenic | 25.0% |
| !! | GCTTTTTGAATAAGATGTAA+GGG | - | chr1.2:39938216-39938235 | MS.gene37276:intron | 25.0% |
| !! | TTTTCAACAACTTCAAAACA+TGG | - | chr1.2:39940373-39940392 | MS.gene37276:intron | 25.0% |
| !! | TTTTTGATGAAATATGAGTG+TGG | - | chr1.2:39937414-39937433 | MS.gene37276:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr1.2:39937363-39937382 | MS.gene37276:intron | 25.0% |
| !!! | ATGGAAGTTTTTGAAATATG+TGG | - | chr1.2:39939312-39939331 | MS.gene37276:intron | 25.0% |
| !!! | GTCTGAAAGTGTTTATAAAT+GGG | + | chr1.2:39939837-39939856 | None:intergenic | 25.0% |
| !!! | TGCTTCATTTTTTGGATTAT+TGG | - | chr1.2:39937234-39937253 | MS.gene37276:intron | 25.0% |
| !!! | TGGAAGTTTTTGAAATATGT+GGG | - | chr1.2:39939313-39939332 | MS.gene37276:intron | 25.0% |
| AACAACTTCAAAACATGGTA+GGG | - | chr1.2:39940378-39940397 | MS.gene37276:intron | 30.0% | |
| AACAATCCGAAGAAAAACTT+CGG | + | chr1.2:39938387-39938406 | None:intergenic | 30.0% | |
| AACATGGAAAGGGAAAAAAT+TGG | - | chr1.2:39940811-39940830 | MS.gene37276:intron | 30.0% | |
| AAGTACTACTACATTACAAC+TGG | - | chr1.2:39940107-39940126 | MS.gene37276:intron | 30.0% | |
| ACATTCTACTCACTTTCAAT+CGG | - | chr1.2:39937632-39937651 | MS.gene37276:intron | 30.0% | |
| ATATGCATTGTAATCTACGA+AGG | + | chr1.2:39939692-39939711 | None:intergenic | 30.0% | |
| CAATTGTAGAAGCAAAATGA+CGG | + | chr1.2:39937547-39937566 | None:intergenic | 30.0% | |
| CACAAAACAACAGAATAAAC+AGG | + | chr1.2:39939251-39939270 | None:intergenic | 30.0% | |
| CATAACTACCTGTTAAAACA+AGG | + | chr1.2:39938749-39938768 | None:intergenic | 30.0% | |
| CCAAAAAAGAAAGTAACTTG+TGG | - | chr1.2:39939342-39939361 | MS.gene37276:intron | 30.0% | |
| CCACTTATAAACAGTATTTC+AGG | - | chr1.2:39940053-39940072 | MS.gene37276:intron | 30.0% | |
| CCTGAAATACTGTTTATAAG+TGG | + | chr1.2:39940056-39940075 | None:intergenic | 30.0% | |
| CGAGATCAAGCTAAATTTAA+GGG | + | chr1.2:39938421-39938440 | None:intergenic | 30.0% | |
| GAACTAACTACACAAATTGT+TGG | - | chr1.2:39937826-39937845 | MS.gene37276:intron | 30.0% | |
| GACAAATTAGCTAAACTTGA+AGG | + | chr1.2:39938493-39938512 | None:intergenic | 30.0% | |
| GGAAAAAATTGGAAAGCAAT+AGG | - | chr1.2:39940822-39940841 | MS.gene37276:intron | 30.0% | |
| GGTTCTACAACGAATAAAAT+TGG | + | chr1.2:39937689-39937708 | None:intergenic | 30.0% | |
| GTAATTCACTTATACATGCT+AGG | - | chr1.2:39940773-39940792 | MS.gene37276:intron | 30.0% | |
| TTCAAAAAGCTTAGAAATGG+AGG | + | chr1.2:39938206-39938225 | None:intergenic | 30.0% | |
| ! | TAACTGTTACTTGCATTATC+AGG | - | chr1.2:39940140-39940159 | MS.gene37276:intron | 30.0% |
| ! | TGATGTCATTTCATGTTTGA+AGG | - | chr1.2:39939564-39939583 | MS.gene37276:intron | 30.0% |
| ! | TTTTCCTCACTGTTATAGTT+TGG | - | chr1.2:39940405-39940424 | MS.gene37276:intron | 30.0% |
| !! | GGTCTGAAAGTGTTTATAAA+TGG | + | chr1.2:39939838-39939857 | None:intergenic | 30.0% |
| !! | TGAAAGTGTTTATAAATGGG+AGG | + | chr1.2:39939834-39939853 | None:intergenic | 30.0% |
| !! | TGAGGCAAAATTGATTTTAG+AGG | - | chr1.2:39937337-39937356 | MS.gene37276:intron | 30.0% |
| !! | TTCTTAAAAGCCGTTTTGTA+TGG | + | chr1.2:39939803-39939822 | None:intergenic | 30.0% |
| !!! | CCACAAGTTACTTTCTTTTT+TGG | + | chr1.2:39939345-39939364 | None:intergenic | 30.0% |
| !!! | CTTGTTTTAACAGGTAGTTA+TGG | - | chr1.2:39938747-39938766 | MS.gene37276:intron | 30.0% |
| !!! | TTGTTTTAGTTGAGTGTTGT+AGG | - | chr1.2:39938893-39938912 | MS.gene37276:intron | 30.0% |
| AACTACCTGTTAAAACAAGG+TGG | + | chr1.2:39938746-39938765 | None:intergenic | 35.0% | |
| AATCATTGGAGAAGACGTAA+TGG | - | chr1.2:39939293-39939312 | MS.gene37276:intron | 35.0% | |
| AATGACATGGTAACATGGAA+AGG | - | chr1.2:39940800-39940819 | MS.gene37276:intron | 35.0% | |
| ACATGGGTACTCTTAAGATT+TGG | - | chr1.2:39939761-39939780 | MS.gene37276:CDS | 35.0% | |
| ACATTCATGTAAAAGTGGGT+TGG | + | chr1.2:39937592-39937611 | None:intergenic | 35.0% | |
| ACTATGCGCTGCTAATATTA+GGG | - | chr1.2:39939225-39939244 | MS.gene37276:intron | 35.0% | |
| ACTTTCCATGAAGAAGATGA+AGG | + | chr1.2:39937062-39937081 | None:intergenic | 35.0% | |
| AGAAAAACTTCGGACTAACA+AGG | + | chr1.2:39938377-39938396 | None:intergenic | 35.0% | |
| AGATAATAAGGAACACAGCT+GGG | - | chr1.2:39940959-39940978 | MS.gene37276:CDS | 35.0% | |
| AGGGTTTAATAGGTCTTGAA+GGG | - | chr1.2:39940458-39940477 | MS.gene37276:intron | 35.0% | |
| AGTGAATTTGAGTACAAGCT+TGG | + | chr1.2:39938024-39938043 | None:intergenic | 35.0% | |
| ATAAGACTTTCCGGAAATCA+AGG | + | chr1.2:39940248-39940267 | None:intergenic | 35.0% | |
| ATATCTAGCAATTTCAAGCC+AGG | + | chr1.2:39939373-39939392 | None:intergenic | 35.0% | |
| ATGACATGGTAACATGGAAA+GGG | - | chr1.2:39940801-39940820 | MS.gene37276:intron | 35.0% | |
| ATGGATGTCTTTATCAAGGA+TGG | - | chr1.2:39938517-39938536 | MS.gene37276:intron | 35.0% | |
| CAACAACTTCAAAACATGGT+AGG | - | chr1.2:39940377-39940396 | MS.gene37276:intron | 35.0% | |
| CAATTCCTTCATCTTCTTCA+TGG | - | chr1.2:39937054-39937073 | MS.gene37276:CDS | 35.0% | |
| CATCTAGCTATAAAGTTAGG+AGG | + | chr1.2:39940614-39940633 | None:intergenic | 35.0% | |
| CATGATTTCTTATCTCGATG+AGG | - | chr1.2:39939608-39939627 | MS.gene37276:intron | 35.0% | |
| CATGGGTACTCTTAAGATTT+GGG | - | chr1.2:39939762-39939781 | MS.gene37276:CDS | 35.0% | |
| CCTAACTTAGCCATACAAAA+CGG | - | chr1.2:39939790-39939809 | MS.gene37276:intron | 35.0% | |
| CGAGTTAGAGTCAGTTATAA+AGG | + | chr1.2:39937483-39937502 | None:intergenic | 35.0% | |
| CTGCAAACATATAAAGCACA+GGG | + | chr1.2:39938463-39938482 | None:intergenic | 35.0% | |
| GAGGTGAATATAGAAATCAG+TGG | + | chr1.2:39939143-39939162 | None:intergenic | 35.0% | |
| GATGTGAATGAAAGGATAAC+TGG | - | chr1.2:39938129-39938148 | MS.gene37276:intron | 35.0% | |
| GCACTAAGAAACACATACAT+GGG | - | chr1.2:39939745-39939764 | MS.gene37276:CDS | 35.0% | |
| GCGAGATCAAGCTAAATTTA+AGG | + | chr1.2:39938422-39938441 | None:intergenic | 35.0% | |
| GTACTCAAATTCACTTACTC+TGG | - | chr1.2:39938029-39938048 | MS.gene37276:intron | 35.0% | |
| GTTTGAATGACATGGTAACA+TGG | - | chr1.2:39940795-39940814 | MS.gene37276:intron | 35.0% | |
| TACTCCTCTTTCATTCTAAG+TGG | + | chr1.2:39938963-39938982 | None:intergenic | 35.0% | |
| TAGTCCAAAAGATCTTGGAA+TGG | - | chr1.2:39939949-39939968 | MS.gene37276:CDS | 35.0% | |
| TCATCCAAACTATAACAGTG+AGG | + | chr1.2:39940412-39940431 | None:intergenic | 35.0% | |
| TCCAAAAAATGAAGCAGGAA+AGG | + | chr1.2:39937230-39937249 | None:intergenic | 35.0% | |
| TGAAAATGAAAAACCGCTCA+GGG | - | chr1.2:39940439-39940458 | MS.gene37276:intron | 35.0% | |
| TGACTTATGACCTTGATTTC+CGG | - | chr1.2:39940235-39940254 | MS.gene37276:intron | 35.0% | |
| TGCACTAAGAAACACATACA+TGG | - | chr1.2:39939744-39939763 | MS.gene37276:CDS | 35.0% | |
| TTCATGCTCTTTATTGCTAC+AGG | - | chr1.2:39938244-39938263 | MS.gene37276:intron | 35.0% | |
| TTCTTAGTCTCTTACGTTGT+GGG | + | chr1.2:39938183-39938202 | None:intergenic | 35.0% | |
| TTTAATAGGTCTTGAAGGGA+AGG | - | chr1.2:39940462-39940481 | MS.gene37276:intron | 35.0% | |
| ! | AAGTCAGAGAACATTTTCAG+AGG | + | chr1.2:39939162-39939181 | None:intergenic | 35.0% |
| ! | ATTGACTTAGAACGAGCTAA+AGG | - | chr1.2:39937874-39937893 | MS.gene37276:intron | 35.0% |
| ! | CATTTTATTCTTGGACACAG+CGG | + | chr1.2:39937955-39937974 | None:intergenic | 35.0% |
| ! | CTACATTACAACTGGTGTTT+TGG | - | chr1.2:39940115-39940134 | MS.gene37276:intron | 35.0% |
| ! | GAAAGGTGCAAACTCTTTAT+AGG | + | chr1.2:39938858-39938877 | None:intergenic | 35.0% |
| ! | GGAGACATCTTTTCAGTTTA+AGG | - | chr1.2:39938050-39938069 | MS.gene37276:intron | 35.0% |
| ! | GTGATGTATGTTAGACCTTT+TGG | - | chr1.2:39940206-39940225 | MS.gene37276:intron | 35.0% |
| ! | GTTAGTCCGAAGTTTTTCTT+CGG | - | chr1.2:39938378-39938397 | MS.gene37276:intron | 35.0% |
| ! | TAGAATGAAAGAGGAGTATG+TGG | - | chr1.2:39938965-39938984 | MS.gene37276:CDS | 35.0% |
| ! | TCTTTTCAGTTTAAGGATGC+AGG | - | chr1.2:39938057-39938076 | MS.gene37276:intron | 35.0% |
| ! | TGTCATTTCATGTTTGAAGG+TGG | - | chr1.2:39939567-39939586 | MS.gene37276:intron | 35.0% |
| ! | TGTTACTTGCATTATCAGGT+TGG | - | chr1.2:39940144-39940163 | MS.gene37276:intron | 35.0% |
| !! | AAAACCGATTTGTAAGGTGA+GGG | - | chr1.2:39940023-39940042 | MS.gene37276:intron | 35.0% |
| !! | ACCTTAAAGCATCGAGTTTA+TGG | + | chr1.2:39937921-39937940 | None:intergenic | 35.0% |
| !! | ACCTTACAAATCGGTTTTCT+AGG | + | chr1.2:39940021-39940040 | None:intergenic | 35.0% |
| !! | CCTTAAAGCATCGAGTTTAT+GGG | + | chr1.2:39937920-39937939 | None:intergenic | 35.0% |
| !! | CCTTACAAATCGGTTTTCTA+GGG | + | chr1.2:39940020-39940039 | None:intergenic | 35.0% |
| !! | GAAAGTTCTAGAGTATAGCT+AGG | - | chr1.2:39940633-39940652 | MS.gene37276:intron | 35.0% |
| !! | TGCATTATCAGGTTGGAATA+TGG | - | chr1.2:39940151-39940170 | MS.gene37276:intron | 35.0% |
| !! | TGGTTCTGATGCAGATAATA+AGG | - | chr1.2:39940947-39940966 | MS.gene37276:CDS | 35.0% |
| !! | TTTGGTTCTACTCTAAGATG+AGG | - | chr1.2:39937319-39937338 | MS.gene37276:intron | 35.0% |
| !!! | TCCTTTCCTGCTTCATTTTT+TGG | - | chr1.2:39937226-39937245 | MS.gene37276:intron | 35.0% |
| AAAACCGCTCAGGGTTTAAT+AGG | - | chr1.2:39940448-39940467 | MS.gene37276:intron | 40.0% | |
| AAGACCTATTAAACCCTGAG+CGG | + | chr1.2:39940455-39940474 | None:intergenic | 40.0% | |
| ACTTAGAACGAGCTAAAGGA+AGG | - | chr1.2:39937878-39937897 | MS.gene37276:intron | 40.0% | |
| AGACCATGTCTCATCTAATC+TGG | - | chr1.2:39939853-39939872 | MS.gene37276:intron | 40.0% | |
| AGAGTTCCAGATCAGCTTAA+AGG | - | chr1.2:39939023-39939042 | MS.gene37276:CDS | 40.0% | |
| ATCAGTGGTAGCTTACTTAG+TGG | + | chr1.2:39939128-39939147 | None:intergenic | 40.0% | |
| ATGAGTGTGGTTAAGCATCA+AGG | - | chr1.2:39937427-39937446 | MS.gene37276:intron | 40.0% | |
| ATTTCCTTAGCATAAGCAGC+AGG | + | chr1.2:39937155-39937174 | None:intergenic | 40.0% | |
| CACTATGCGCTGCTAATATT+AGG | - | chr1.2:39939224-39939243 | MS.gene37276:intron | 40.0% | |
| CAGATAATAAGGAACACAGC+TGG | - | chr1.2:39940958-39940977 | MS.gene37276:CDS | 40.0% | |
| CAGGGTTTAATAGGTCTTGA+AGG | - | chr1.2:39940457-39940476 | MS.gene37276:intron | 40.0% | |
| CATAAGTCAGCATGACCAAA+AGG | + | chr1.2:39940224-39940243 | None:intergenic | 40.0% | |
| CATGCTAGGTTTGAATGACA+TGG | - | chr1.2:39940787-39940806 | MS.gene37276:intron | 40.0% | |
| CCCATAAACTCGATGCTTTA+AGG | - | chr1.2:39937917-39937936 | MS.gene37276:intron | 40.0% | |
| CCTGCAAACATATAAAGCAC+AGG | + | chr1.2:39938464-39938483 | None:intergenic | 40.0% | |
| CCTGTGCTTTATATGTTTGC+AGG | - | chr1.2:39938461-39938480 | MS.gene37276:intron | 40.0% | |
| CTGAAAATGAAAAACCGCTC+AGG | - | chr1.2:39940438-39940457 | MS.gene37276:intron | 40.0% | |
| GAAGCAGGAAAGGAAATGAA+TGG | + | chr1.2:39937220-39937239 | None:intergenic | 40.0% | |
| GAAGCGATTCTTTAGCAGAA+AGG | + | chr1.2:39937184-39937203 | None:intergenic | 40.0% | |
| GGTACTCTTAAGATTTGGGT+TGG | - | chr1.2:39939766-39939785 | MS.gene37276:intron | 40.0% | |
| GTACCAGATTAGATGAGACA+TGG | + | chr1.2:39939859-39939878 | None:intergenic | 40.0% | |
| GTCACTATATGTCCAGTCTT+GGG | + | chr1.2:39939909-39939928 | None:intergenic | 40.0% | |
| GTTCTCTGACTTAACTGTTC+TGG | - | chr1.2:39939170-39939189 | MS.gene37276:intron | 40.0% | |
| GTTCTTAGTCTCTTACGTTG+TGG | + | chr1.2:39938184-39938203 | None:intergenic | 40.0% | |
| TATTGTGTCACCAACAGTCT+TGG | - | chr1.2:39938995-39939014 | MS.gene37276:CDS | 40.0% | |
| TCAACCAAGTTAACTGTGGA+GGG | - | chr1.2:39938936-39938955 | MS.gene37276:CDS | 40.0% | |
| TCTCTCAACCAAGTTAACTG+TGG | - | chr1.2:39938932-39938951 | MS.gene37276:CDS | 40.0% | |
| TTTCAGTTTAAGGATGCAGG+TGG | - | chr1.2:39938060-39938079 | MS.gene37276:intron | 40.0% | |
| ! | AGAGCCATTCCAAGATCTTT+TGG | + | chr1.2:39939956-39939975 | None:intergenic | 40.0% |
| ! | ATCAGCTTAAAGGTGCACTT+GGG | - | chr1.2:39939033-39939052 | MS.gene37276:CDS | 40.0% |
| ! | ATGAAAGAGGAGTATGTGGA+AGG | - | chr1.2:39938969-39938988 | MS.gene37276:CDS | 40.0% |
| ! | CCGTTTTGTATGGCTAAGTT+AGG | + | chr1.2:39939793-39939812 | None:intergenic | 40.0% |
| ! | GCTATGGTTCAAGTTCAAAC+TGG | - | chr1.2:39937125-39937144 | MS.gene37276:intron | 40.0% |
| ! | TAGTGGAACTTTTAGCCCAT+CGG | + | chr1.2:39939111-39939130 | None:intergenic | 40.0% |
| ! | TGAAAGAGGAGTATGTGGAA+GGG | - | chr1.2:39938970-39938989 | MS.gene37276:CDS | 40.0% |
| ! | TGCTGCTTATGCTAAGGAAA+TGG | - | chr1.2:39937154-39937173 | MS.gene37276:intron | 40.0% |
| ! | TTCCATCGACCTTCTAGAAA+GGG | + | chr1.2:39938273-39938292 | None:intergenic | 40.0% |
| !! | AAAGGATAACTGGTCTTGAG+CGG | - | chr1.2:39938139-39938158 | MS.gene37276:intron | 40.0% |
| !! | AACTCGATGCTTTAAGGTCT+TGG | - | chr1.2:39937923-39937942 | MS.gene37276:intron | 40.0% |
| !! | ACTCGATGCTTTAAGGTCTT+GGG | - | chr1.2:39937924-39937943 | MS.gene37276:intron | 40.0% |
| !! | AGGGAAGCATTGTAACTCAA+AGG | + | chr1.2:39938444-39938463 | None:intergenic | 40.0% |
| !! | CCCTAGAAAACCGATTTGTA+AGG | - | chr1.2:39940017-39940036 | MS.gene37276:intron | 40.0% |
| !! | GAAAACCGATTTGTAAGGTG+AGG | - | chr1.2:39940022-39940041 | MS.gene37276:intron | 40.0% |
| !! | GTTCTAGAGTATAGCTAGGT+TGG | - | chr1.2:39940637-39940656 | MS.gene37276:intron | 40.0% |
| !! | TCATGTAAAAGTGGGTTGGA+TGG | + | chr1.2:39937588-39937607 | None:intergenic | 40.0% |
| !!! | AGTGTCCACCTTGTTTTAAC+AGG | - | chr1.2:39938738-39938757 | MS.gene37276:intron | 40.0% |
| !!! | GTTTTGAGAGCTTAGTCTCT+GGG | - | chr1.2:39938082-39938101 | MS.gene37276:intron | 40.0% |
| AAGGTCGATGGAACTTTGAG+TGG | - | chr1.2:39938280-39938299 | MS.gene37276:intron | 45.0% | |
| AATCTGGACTTGATTCTCCC+AGG | + | chr1.2:39941026-39941045 | None:intergenic | 45.0% | |
| ACTCTGTCTTCCAAGACTGT+TGG | + | chr1.2:39939008-39939027 | None:intergenic | 45.0% | |
| AGTGCACCTTTAAGCTGATC+TGG | + | chr1.2:39939032-39939051 | None:intergenic | 45.0% | |
| ATCTGGACTTGATTCTCCCA+GGG | + | chr1.2:39941025-39941044 | None:intergenic | 45.0% | |
| CAACCAAGTTAACTGTGGAG+GGG | - | chr1.2:39938937-39938956 | MS.gene37276:CDS | 45.0% | |
| CACCTAACTCACACACAACT+AGG | + | chr1.2:39940694-39940713 | None:intergenic | 45.0% | |
| CCAAATATGTACGCACAGAC+AGG | - | chr1.2:39939462-39939481 | MS.gene37276:intron | 45.0% | |
| CCTGTCTGTGCGTACATATT+TGG | + | chr1.2:39939465-39939484 | None:intergenic | 45.0% | |
| CGATGGAACTTTGAGTGGTT+TGG | - | chr1.2:39938285-39938304 | MS.gene37276:intron | 45.0% | |
| CGTGACAGGATAAGACTTTC+CGG | + | chr1.2:39940257-39940276 | None:intergenic | 45.0% | |
| CTAACTCACACACAACTAGG+AGG | + | chr1.2:39940691-39940710 | None:intergenic | 45.0% | |
| CTAGTTGTGTGTGAGTTAGG+TGG | - | chr1.2:39940692-39940711 | MS.gene37276:intron | 45.0% | |
| CTCAACCAAGTTAACTGTGG+AGG | - | chr1.2:39938935-39938954 | MS.gene37276:CDS | 45.0% | |
| CTCCTAGTTGTGTGTGAGTT+AGG | - | chr1.2:39940689-39940708 | MS.gene37276:intron | 45.0% | |
| GCATCCCTCACCTTACAAAT+CGG | + | chr1.2:39940030-39940049 | None:intergenic | 45.0% | |
| GCCAGAAAGTGAAACTACTC+AGG | + | chr1.2:39940348-39940367 | None:intergenic | 45.0% | |
| GCCTGAGTAGTTTCACTTTC+TGG | - | chr1.2:39940344-39940363 | MS.gene37276:intron | 45.0% | |
| GGTCACTATATGTCCAGTCT+TGG | + | chr1.2:39939910-39939929 | None:intergenic | 45.0% | |
| GTGGGTAGTCCAAAAGATCT+TGG | - | chr1.2:39939944-39939963 | MS.gene37276:CDS | 45.0% | |
| TACAGGTCACCCTTTCTAGA+AGG | - | chr1.2:39938261-39938280 | MS.gene37276:intron | 45.0% | |
| TATCCTAGCTGCAAACAACC+CGG | + | chr1.2:39938322-39938341 | None:intergenic | 45.0% | |
| TGGACATATAGTGACCCAAG+TGG | - | chr1.2:39939914-39939933 | MS.gene37276:CDS | 45.0% | |
| TTTCAACTTCACGCATCACG+TGG | - | chr1.2:39937081-39937100 | MS.gene37276:intron | 45.0% | |
| ! | AAGTAACTTGTGGCTTAGCC+TGG | - | chr1.2:39939352-39939371 | MS.gene37276:intron | 45.0% |
| ! | AGAGCATCACGTAAAGGTAC+GGG | + | chr1.2:39939086-39939105 | None:intergenic | 45.0% |
| ! | GATCAGCTTAAAGGTGCACT+TGG | - | chr1.2:39939032-39939051 | MS.gene37276:CDS | 45.0% |
| ! | GTTCCATCGACCTTCTAGAA+AGG | + | chr1.2:39938274-39938293 | None:intergenic | 45.0% |
| ! | TACCCACTATCATGCCACTT+GGG | + | chr1.2:39939931-39939950 | None:intergenic | 45.0% |
| !! | AACTTTGAGTGGTTTGGTCC+CGG | - | chr1.2:39938291-39938310 | MS.gene37276:intron | 45.0% |
| !! | GAGAGCATCACGTAAAGGTA+CGG | + | chr1.2:39939087-39939106 | None:intergenic | 45.0% |
| !! | TGTGCTACTTTACACGTGAC+AGG | + | chr1.2:39940271-39940290 | None:intergenic | 45.0% |
| !!! | GGTTTTGAGAGCTTAGTCTC+TGG | - | chr1.2:39938081-39938100 | MS.gene37276:intron | 45.0% |
| ATCCTAGCTGCAAACAACCC+GGG | + | chr1.2:39938321-39938340 | None:intergenic | 50.0% | |
| CTACCCACTATCATGCCACT+TGG | + | chr1.2:39939932-39939951 | None:intergenic | 50.0% | |
| CTTGATTCTCCCAGGGATGA+CGG | + | chr1.2:39941018-39941037 | None:intergenic | 50.0% | |
| GACCCAAGTGGCATGATAGT+GGG | - | chr1.2:39939926-39939945 | MS.gene37276:CDS | 50.0% | |
| GGGGCCACTTAGAATGAAAG+AGG | - | chr1.2:39938956-39938975 | MS.gene37276:CDS | 50.0% | |
| TGACCCAAGTGGCATGATAG+TGG | - | chr1.2:39939925-39939944 | MS.gene37276:CDS | 50.0% | |
| ! | CACCCTTTCTAGAAGGTCGA+TGG | - | chr1.2:39938268-39938287 | MS.gene37276:intron | 50.0% |
| ! | TGCACCTGCTGCTTATGCTA+AGG | - | chr1.2:39937148-39937167 | MS.gene37276:intron | 50.0% |
| !! | CGATGCTTTAAGGTCTTGGG+AGG | - | chr1.2:39937927-39937946 | MS.gene37276:intron | 50.0% |
| ACACACAACTAGGAGGTCCC+GGG | + | chr1.2:39940684-39940703 | None:intergenic | 55.0% | |
| AGCGGCTCAATCCAACACCT+CGG | - | chr1.2:39938157-39938176 | MS.gene37276:intron | 55.0% | |
| CACACACAACTAGGAGGTCC+CGG | + | chr1.2:39940685-39940704 | None:intergenic | 55.0% | |
| CACCATCTCATGCCCAAGAC+TGG | - | chr1.2:39939894-39939913 | MS.gene37276:CDS | 55.0% | |
| GTCCAGTCTTGGGCATGAGA+TGG | + | chr1.2:39939899-39939918 | None:intergenic | 55.0% | |
| TACGTGATGCTCTCGCCGAT+GGG | - | chr1.2:39939093-39939112 | MS.gene37276:CDS | 55.0% | |
| TGCAAACAACCCGGGAGATC+CGG | + | chr1.2:39938313-39938332 | None:intergenic | 55.0% | |
| TGGCCCCTCCACAGTTAACT+TGG | + | chr1.2:39938943-39938962 | None:intergenic | 55.0% | |
| TTACGTGATGCTCTCGCCGA+TGG | - | chr1.2:39939092-39939111 | MS.gene37276:CDS | 55.0% | |
| ! | GCTTAAAGGTGCACTTGGGC+AGG | - | chr1.2:39939037-39939056 | MS.gene37276:CDS | 55.0% |
| !! | TCGGCGAGAGCATCACGTAA+AGG | + | chr1.2:39939092-39939111 | None:intergenic | 55.0% |
| CGTTCACCCAGGTTCGAACC+CGG | - | chr1.2:39940663-39940682 | MS.gene37276:intron | 60.0% | |
| CTCCCGGGTTGTTTGCAGCT+AGG | - | chr1.2:39938316-39938335 | MS.gene37276:intron | 60.0% | |
| GATGCATCGCCGTCATCCCT+GGG | - | chr1.2:39941006-39941025 | MS.gene37276:CDS | 60.0% | |
| GCAAACAACCCGGGAGATCC+GGG | + | chr1.2:39938312-39938331 | None:intergenic | 60.0% | |
| GTCTCTTACGTTGTGGGCCG+AGG | + | chr1.2:39938177-39938196 | None:intergenic | 60.0% | |
| GTTCACCCAGGTTCGAACCC+GGG | - | chr1.2:39940664-39940683 | MS.gene37276:intron | 60.0% | |
| TACGTTGTGGGCCGAGGTGT+TGG | + | chr1.2:39938171-39938190 | None:intergenic | 60.0% | |
| ! | GCATCACGTGGCAGAAGCGT+GGG | - | chr1.2:39937093-39937112 | MS.gene37276:intron | 60.0% |
| ! | GCGTGGGTGTTGCAGAGCTA+TGG | - | chr1.2:39937109-39937128 | MS.gene37276:intron | 60.0% |
| ! | TAGGTTGGACGCGTTCACCC+AGG | - | chr1.2:39940652-39940671 | MS.gene37276:intron | 60.0% |
| !! | TGGTTTGGTCCCGGATCTCC+CGG | - | chr1.2:39938300-39938319 | MS.gene37276:intron | 60.0% |
| CGATGCATCGCCGTCATCCC+TGG | - | chr1.2:39941005-39941024 | MS.gene37276:CDS | 65.0% | |
| CGCATCACGTGGCAGAAGCG+TGG | - | chr1.2:39937092-39937111 | MS.gene37276:intron | 65.0% | |
| GAGGTCCCGGGTTCGAACCT+GGG | + | chr1.2:39940672-39940691 | None:intergenic | 65.0% | |
| ! | GGTTTGGTCCCGGATCTCCC+GGG | - | chr1.2:39938301-39938320 | MS.gene37276:intron | 65.0% |
| GGAGGTCCCGGGTTCGAACC+TGG | + | chr1.2:39940673-39940692 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 39936993 | 39941056 | 39936993 | ID=MS.gene37276 |
| chr1.2 | mRNA | 39936993 | 39941056 | 39936993 | ID=MS.gene37276.t1;Parent=MS.gene37276 |
| chr1.2 | exon | 39940838 | 39941056 | 39940838 | ID=MS.gene37276.t1.exon1;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39940838 | 39941056 | 39940838 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39939862 | 39939983 | 39939862 | ID=MS.gene37276.t1.exon2;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39939862 | 39939983 | 39939862 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39939700 | 39939783 | 39939700 | ID=MS.gene37276.t1.exon3;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39939700 | 39939783 | 39939700 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39939470 | 39939566 | 39939470 | ID=MS.gene37276.t1.exon4;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39939470 | 39939566 | 39939470 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39938918 | 39939134 | 39938918 | ID=MS.gene37276.t1.exon5;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39938918 | 39939134 | 39938918 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39938411 | 39938463 | 39938411 | ID=MS.gene37276.t1.exon6;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39938411 | 39938463 | 39938411 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| chr1.2 | exon | 39936993 | 39937088 | 39936993 | ID=MS.gene37276.t1.exon7;Parent=MS.gene37276.t1 |
| chr1.2 | CDS | 39936993 | 39937088 | 39936993 | ID=cds.MS.gene37276.t1;Parent=MS.gene37276.t1 |
| Gene Sequence |
| Protein sequence |
