Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40739.t1 | XP_003610261.2 | 100 | 166 | 0 | 0 | 6 | 171 | 56 | 221 | 1.30E-92 | 349 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40739.t1 | Q94AN4 | 82.2 | 174 | 31 | 0 | 6 | 179 | 64 | 237 | 7.6e-81 | 301.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40739.t1 | G7JFH5 | 100.0 | 166 | 0 | 0 | 6 | 171 | 56 | 221 | 9.6e-93 | 349.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene40739.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene40739 | 0.814483 | 1.51E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene40739 | 0.830413 | 2.98E-55 | -1.69E-46 |
| MS.gene050020 | MS.gene40739 | 0.827171 | 1.81E-54 | -1.69E-46 |
| MS.gene05016 | MS.gene40739 | 0.805381 | 1.37E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene40739 | 0.806508 | 7.95E-50 | -1.69E-46 |
| MS.gene050585 | MS.gene40739 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene050586 | MS.gene40739 | 0.82927 | 5.65E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene40739 | 0.867739 | 1.10E-65 | -1.69E-46 |
| MS.gene050808 | MS.gene40739 | 0.838249 | 3.22E-57 | -1.69E-46 |
| MS.gene050959 | MS.gene40739 | 0.80718 | 5.73E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene40739 | 0.841357 | 4.99E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene40739 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene40739 | 0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene051577 | MS.gene40739 | 0.817332 | 3.48E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene40739 | 0.843788 | 1.13E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene40739 | 0.829395 | 5.27E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene40739 | 0.83747 | 5.10E-57 | -1.69E-46 |
| MS.gene052133 | MS.gene40739 | 0.83725 | 5.81E-57 | -1.69E-46 |
| MS.gene052335 | MS.gene40739 | 0.81718 | 3.77E-52 | -1.69E-46 |
| MS.gene052397 | MS.gene40739 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene052514 | MS.gene40739 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene40739 | 0.842839 | 2.02E-58 | -1.69E-46 |
| MS.gene052561 | MS.gene40739 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene40739 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene40739 | 0.869499 | 2.96E-66 | -1.69E-46 |
| MS.gene052732 | MS.gene40739 | 0.84197 | 3.44E-58 | -1.69E-46 |
| MS.gene052860 | MS.gene40739 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene40739 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene40739 | 0.810179 | 1.31E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene40739 | 0.856297 | 3.54E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene40739 | 0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene053174 | MS.gene40739 | 0.845497 | 3.91E-59 | -1.69E-46 |
| MS.gene053581 | MS.gene40739 | 0.877695 | 5.11E-69 | -1.69E-46 |
| MS.gene054550 | MS.gene40739 | 0.840989 | 6.24E-58 | -1.69E-46 |
| MS.gene054554 | MS.gene40739 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene40739 | 0.85359 | 2.16E-61 | -1.69E-46 |
| MS.gene05462 | MS.gene40739 | 0.826613 | 2.46E-54 | -1.69E-46 |
| MS.gene055144 | MS.gene40739 | 0.803095 | 4.10E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene40739 | 0.849945 | 2.33E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene40739 | 0.839395 | 1.63E-57 | -1.69E-46 |
| MS.gene055467 | MS.gene40739 | 0.82312 | 1.64E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene40739 | 0.839246 | 1.78E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene40739 | 0.851421 | 8.97E-61 | -1.69E-46 |
| MS.gene055512 | MS.gene40739 | 0.809577 | 1.77E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene40739 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene40739 | -0.825908 | 3.63E-54 | -1.69E-46 |
| MS.gene055890 | MS.gene40739 | 0.823577 | 1.28E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene40739 | 0.833711 | 4.56E-56 | -1.69E-46 |
| MS.gene056043 | MS.gene40739 | -0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene40739 | 0.830165 | 3.42E-55 | -1.69E-46 |
| MS.gene056507 | MS.gene40739 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene056553 | MS.gene40739 | 0.810217 | 1.29E-50 | -1.69E-46 |
| MS.gene057446 | MS.gene40739 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene40739 | 0.815585 | 8.57E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene40739 | 0.806965 | 6.37E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene40739 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene058339 | MS.gene40739 | 0.813114 | 3.02E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene40739 | 0.82669 | 2.36E-54 | -1.69E-46 |
| MS.gene058945 | MS.gene40739 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene40739 | 0.808237 | 3.42E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene40739 | 0.825598 | 4.30E-54 | -1.69E-46 |
| MS.gene060480 | MS.gene40739 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene40739 | 0.840666 | 7.58E-58 | -1.69E-46 |
| MS.gene061006 | MS.gene40739 | 0.83299 | 6.90E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40739.t1 | MTR_4g130270 | 99.425 | 174 | 1 | 0 | 6 | 179 | 56 | 229 | 9.34e-131 | 370 |
| MS.gene40739.t1 | MTR_2g460730 | 89.412 | 170 | 15 | 1 | 6 | 175 | 56 | 222 | 1.11e-103 | 302 |
| MS.gene40739.t1 | MTR_4g007770 | 85.632 | 174 | 22 | 1 | 6 | 179 | 45 | 215 | 4.87e-101 | 294 |
| MS.gene40739.t1 | MTR_7g009410 | 73.256 | 172 | 43 | 1 | 6 | 177 | 74 | 242 | 3.89e-92 | 274 |
| MS.gene40739.t1 | MTR_6g011490 | 72.455 | 167 | 43 | 1 | 6 | 172 | 70 | 233 | 9.31e-89 | 264 |
| MS.gene40739.t1 | MTR_8g044070 | 72.619 | 168 | 43 | 1 | 6 | 173 | 64 | 228 | 1.84e-86 | 260 |
| MS.gene40739.t1 | MTR_8g468920 | 75.000 | 168 | 39 | 1 | 6 | 173 | 78 | 242 | 2.87e-85 | 256 |
| MS.gene40739.t1 | MTR_4g127930 | 72.327 | 159 | 44 | 0 | 6 | 164 | 168 | 326 | 1.81e-84 | 258 |
| MS.gene40739.t1 | MTR_8g044040 | 74.251 | 167 | 40 | 1 | 6 | 172 | 65 | 228 | 1.60e-82 | 249 |
| MS.gene40739.t1 | MTR_4g065370 | 69.375 | 160 | 49 | 0 | 5 | 164 | 171 | 330 | 9.84e-81 | 249 |
| MS.gene40739.t1 | MTR_7g080460 | 72.327 | 159 | 44 | 0 | 6 | 164 | 268 | 426 | 1.24e-80 | 252 |
| MS.gene40739.t1 | MTR_7g080460 | 39.773 | 88 | 45 | 1 | 90 | 169 | 250 | 337 | 3.79e-11 | 61.2 |
| MS.gene40739.t1 | MTR_2g098180 | 69.375 | 160 | 49 | 0 | 5 | 164 | 175 | 334 | 8.15e-80 | 246 |
| MS.gene40739.t1 | MTR_2g098180 | 39.362 | 94 | 49 | 1 | 84 | 169 | 152 | 245 | 2.78e-11 | 61.6 |
| MS.gene40739.t1 | MTR_5g015070 | 71.069 | 159 | 46 | 0 | 6 | 164 | 258 | 416 | 9.53e-80 | 246 |
| MS.gene40739.t1 | MTR_5g015070 | 36.275 | 102 | 56 | 2 | 77 | 169 | 226 | 327 | 3.12e-11 | 61.2 |
| MS.gene40739.t1 | MTR_8g020510 | 70.000 | 160 | 45 | 1 | 5 | 164 | 256 | 412 | 1.72e-76 | 239 |
| MS.gene40739.t1 | MTR_3g103460 | 68.750 | 160 | 47 | 1 | 5 | 164 | 318 | 474 | 1.13e-74 | 236 |
| MS.gene40739.t1 | MTR_4g097520 | 69.182 | 159 | 46 | 1 | 6 | 164 | 319 | 474 | 1.54e-74 | 236 |
| MS.gene40739.t1 | MTR_1g017400 | 69.182 | 159 | 46 | 1 | 6 | 164 | 321 | 476 | 8.03e-74 | 234 |
| MS.gene40739.t1 | MTR_8g068510 | 66.250 | 160 | 51 | 1 | 5 | 164 | 139 | 295 | 1.46e-73 | 226 |
| MS.gene40739.t1 | MTR_5g031880 | 68.125 | 160 | 48 | 1 | 5 | 164 | 232 | 388 | 1.12e-64 | 207 |
| MS.gene40739.t1 | MTR_7g091390 | 52.299 | 174 | 69 | 4 | 5 | 177 | 65 | 225 | 3.24e-45 | 154 |
| MS.gene40739.t1 | MTR_2g093060 | 50.000 | 164 | 71 | 3 | 7 | 170 | 141 | 293 | 3.90e-41 | 144 |
| MS.gene40739.t1 | MTR_2g093060 | 50.000 | 164 | 71 | 3 | 7 | 170 | 141 | 293 | 4.22e-41 | 144 |
| MS.gene40739.t1 | MTR_4g094868 | 48.571 | 175 | 76 | 4 | 7 | 178 | 183 | 346 | 8.78e-41 | 144 |
| MS.gene40739.t1 | MTR_4g094868 | 48.295 | 176 | 76 | 4 | 7 | 178 | 183 | 347 | 1.25e-40 | 144 |
| MS.gene40739.t1 | MTR_5g016810 | 48.521 | 169 | 76 | 3 | 7 | 175 | 159 | 316 | 7.67e-40 | 141 |
| MS.gene40739.t1 | MTR_7g100590 | 47.647 | 170 | 78 | 3 | 7 | 176 | 146 | 304 | 9.75e-40 | 140 |
| MS.gene40739.t1 | MTR_4g061200 | 50.000 | 158 | 68 | 3 | 7 | 164 | 138 | 284 | 3.73e-39 | 137 |
| MS.gene40739.t1 | MTR_4g061200 | 49.080 | 163 | 72 | 3 | 7 | 169 | 138 | 289 | 9.12e-39 | 137 |
| MS.gene40739.t1 | MTR_4g094868 | 48.125 | 160 | 79 | 2 | 22 | 178 | 32 | 190 | 1.34e-37 | 132 |
| MS.gene40739.t1 | MTR_5g016810 | 46.286 | 175 | 77 | 4 | 7 | 175 | 159 | 322 | 5.25e-37 | 134 |
| MS.gene40739.t1 | MTR_7g061190 | 49.624 | 133 | 66 | 1 | 32 | 164 | 3 | 134 | 1.98e-33 | 116 |
| MS.gene40739.t1 | MTR_2g093060 | 45.732 | 164 | 63 | 4 | 7 | 170 | 141 | 278 | 4.77e-32 | 119 |
| MS.gene40739.t1 | MTR_4g061200 | 45.570 | 158 | 60 | 4 | 7 | 164 | 138 | 269 | 5.62e-30 | 113 |
| MS.gene40739.t1 | MTR_4g061200 | 44.785 | 163 | 64 | 4 | 7 | 169 | 138 | 274 | 1.07e-29 | 113 |
| MS.gene40739.t1 | MTR_7g091390 | 48.966 | 145 | 63 | 3 | 34 | 177 | 3 | 137 | 2.28e-29 | 110 |
| MS.gene40739.t1 | MTR_3g090510 | 45.370 | 108 | 58 | 1 | 38 | 145 | 163 | 269 | 9.66e-20 | 85.5 |
| MS.gene40739.t1 | MTR_7g060560 | 42.391 | 92 | 51 | 2 | 54 | 145 | 172 | 261 | 1.94e-16 | 76.3 |
| MS.gene40739.t1 | MTR_1g049140 | 35.374 | 147 | 82 | 5 | 7 | 152 | 144 | 278 | 4.23e-13 | 66.6 |
| MS.gene40739.t1 | MTR_1g049140 | 35.374 | 147 | 82 | 5 | 7 | 152 | 144 | 278 | 4.99e-13 | 66.2 |
| MS.gene40739.t1 | MTR_1g049140 | 40.171 | 117 | 59 | 3 | 7 | 123 | 144 | 249 | 7.90e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40739.t1 | AT1G16060 | 82.184 | 174 | 31 | 0 | 6 | 179 | 64 | 237 | 3.93e-91 | 270 |
| MS.gene40739.t1 | AT3G54320 | 80.488 | 164 | 32 | 0 | 6 | 169 | 71 | 234 | 2.81e-88 | 265 |
| MS.gene40739.t1 | AT1G79700 | 83.234 | 167 | 25 | 1 | 5 | 171 | 57 | 220 | 3.92e-88 | 261 |
| MS.gene40739.t1 | AT3G54320 | 80.488 | 164 | 32 | 0 | 6 | 169 | 71 | 234 | 4.52e-88 | 265 |
| MS.gene40739.t1 | AT5G57390 | 72.327 | 159 | 44 | 0 | 6 | 164 | 91 | 249 | 3.07e-84 | 255 |
| MS.gene40739.t1 | AT5G57390 | 71.875 | 160 | 45 | 0 | 5 | 164 | 208 | 367 | 2.41e-83 | 256 |
| MS.gene40739.t1 | AT1G72570 | 70.440 | 159 | 47 | 0 | 6 | 164 | 229 | 387 | 9.20e-81 | 245 |
| MS.gene40739.t1 | AT1G72570 | 40.206 | 97 | 49 | 2 | 88 | 175 | 208 | 304 | 5.57e-11 | 60.5 |
| MS.gene40739.t1 | AT5G17430 | 72.327 | 159 | 44 | 0 | 6 | 164 | 154 | 312 | 1.21e-80 | 248 |
| MS.gene40739.t1 | AT1G51190 | 69.811 | 159 | 48 | 0 | 6 | 164 | 196 | 354 | 1.95e-80 | 249 |
| MS.gene40739.t1 | AT5G17430 | 72.327 | 159 | 44 | 0 | 6 | 164 | 216 | 374 | 2.34e-80 | 249 |
| MS.gene40739.t1 | AT3G20840 | 67.925 | 159 | 51 | 0 | 6 | 164 | 187 | 345 | 1.08e-78 | 244 |
| MS.gene40739.t1 | AT1G79700 | 77.246 | 167 | 25 | 2 | 5 | 171 | 57 | 210 | 6.78e-77 | 232 |
| MS.gene40739.t1 | AT4G37750 | 69.182 | 159 | 49 | 0 | 6 | 164 | 289 | 447 | 1.28e-75 | 236 |
| MS.gene40739.t1 | AT1G16060 | 80.405 | 148 | 29 | 0 | 32 | 179 | 20 | 167 | 4.05e-70 | 214 |
| MS.gene40739.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 179 | 337 | 6.27e-70 | 218 |
| MS.gene40739.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 237 | 395 | 1.29e-69 | 219 |
| MS.gene40739.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 237 | 395 | 1.29e-69 | 219 |
| MS.gene40739.t1 | AT3G54320 | 80.882 | 136 | 26 | 0 | 34 | 169 | 33 | 168 | 8.70e-69 | 213 |
| MS.gene40739.t1 | AT3G54320 | 80.882 | 136 | 26 | 0 | 34 | 169 | 33 | 168 | 8.70e-69 | 213 |
| MS.gene40739.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 236 | 394 | 6.90e-68 | 216 |
| MS.gene40739.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 236 | 394 | 6.90e-68 | 216 |
| MS.gene40739.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 259 | 417 | 1.08e-67 | 216 |
| MS.gene40739.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 274 | 432 | 1.44e-67 | 216 |
| MS.gene40739.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 274 | 432 | 1.44e-67 | 216 |
| MS.gene40739.t1 | AT1G79700 | 83.333 | 138 | 20 | 1 | 34 | 171 | 10 | 144 | 4.17e-67 | 205 |
| MS.gene40739.t1 | AT1G79700 | 82.353 | 136 | 21 | 1 | 36 | 171 | 6 | 138 | 3.20e-65 | 200 |
| MS.gene40739.t1 | AT5G10510 | 66.667 | 159 | 50 | 1 | 6 | 164 | 236 | 391 | 1.86e-63 | 204 |
| MS.gene40739.t1 | AT5G65510 | 68.462 | 130 | 41 | 0 | 5 | 134 | 178 | 307 | 1.02e-62 | 196 |
| MS.gene40739.t1 | AT5G10510 | 59.218 | 179 | 53 | 1 | 6 | 164 | 274 | 452 | 2.51e-60 | 197 |
| MS.gene40739.t1 | AT1G16060 | 84.466 | 103 | 16 | 0 | 77 | 179 | 1 | 103 | 3.51e-52 | 166 |
| MS.gene40739.t1 | AT1G16060 | 84.466 | 103 | 16 | 0 | 77 | 179 | 1 | 103 | 3.51e-52 | 166 |
| MS.gene40739.t1 | AT1G16060 | 84.466 | 103 | 16 | 0 | 77 | 179 | 1 | 103 | 3.51e-52 | 166 |
| MS.gene40739.t1 | AT1G16060 | 84.466 | 103 | 16 | 0 | 77 | 179 | 1 | 103 | 3.51e-52 | 166 |
| MS.gene40739.t1 | AT2G41710 | 53.846 | 169 | 69 | 2 | 5 | 173 | 75 | 234 | 3.43e-49 | 164 |
| MS.gene40739.t1 | AT2G41710 | 52.299 | 174 | 74 | 2 | 6 | 179 | 76 | 240 | 4.58e-49 | 165 |
| MS.gene40739.t1 | AT2G41710 | 52.299 | 174 | 74 | 2 | 6 | 179 | 111 | 275 | 5.86e-49 | 164 |
| MS.gene40739.t1 | AT2G41710 | 50.556 | 180 | 75 | 3 | 5 | 179 | 75 | 245 | 9.52e-47 | 158 |
| MS.gene40739.t1 | AT3G54320 | 82.796 | 93 | 16 | 0 | 77 | 169 | 1 | 93 | 1.54e-43 | 146 |
| MS.gene40739.t1 | AT2G28550 | 47.647 | 170 | 78 | 3 | 7 | 176 | 160 | 318 | 7.04e-41 | 143 |
| MS.gene40739.t1 | AT4G36920 | 48.521 | 169 | 76 | 3 | 7 | 175 | 138 | 295 | 1.94e-40 | 141 |
| MS.gene40739.t1 | AT4G36920 | 48.521 | 169 | 76 | 3 | 7 | 175 | 138 | 295 | 1.94e-40 | 141 |
| MS.gene40739.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 4.90e-39 | 135 |
| MS.gene40739.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 5.40e-39 | 134 |
| MS.gene40739.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 1.36e-38 | 135 |
| MS.gene40739.t1 | AT2G28550 | 49.254 | 134 | 57 | 3 | 7 | 140 | 160 | 282 | 1.16e-32 | 119 |
| MS.gene40739.t1 | AT2G28550 | 43.529 | 170 | 70 | 4 | 7 | 176 | 160 | 303 | 7.98e-32 | 119 |
| MS.gene40739.t1 | AT1G16060 | 78.378 | 74 | 16 | 0 | 106 | 179 | 8 | 81 | 1.16e-29 | 108 |
| MS.gene40739.t1 | AT5G67180 | 47.761 | 134 | 59 | 3 | 7 | 140 | 103 | 225 | 1.26e-29 | 109 |
| MS.gene40739.t1 | AT2G28550 | 49.167 | 120 | 50 | 3 | 7 | 126 | 160 | 268 | 4.94e-27 | 103 |
| MS.gene40739.t1 | AT2G28550 | 49.167 | 120 | 50 | 3 | 7 | 126 | 160 | 268 | 4.94e-27 | 103 |
| MS.gene40739.t1 | AT2G28550 | 45.802 | 131 | 55 | 2 | 34 | 164 | 11 | 125 | 1.11e-25 | 100 |
| MS.gene40739.t1 | AT2G39250 | 37.097 | 124 | 67 | 3 | 7 | 129 | 115 | 228 | 6.24e-21 | 86.7 |
| MS.gene40739.t1 | AT2G39250 | 43.878 | 98 | 45 | 2 | 7 | 104 | 115 | 202 | 2.16e-20 | 86.7 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 1.88e-19 | 84.7 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 1.88e-19 | 84.7 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 1.88e-19 | 84.7 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 1.97e-19 | 85.1 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.00e-19 | 85.1 |
| MS.gene40739.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.47e-19 | 84.7 |
| MS.gene40739.t1 | AT3G54990 | 43.564 | 101 | 47 | 2 | 7 | 107 | 129 | 219 | 7.73e-17 | 75.9 |
| MS.gene40739.t1 | AT3G54990 | 43.564 | 101 | 47 | 2 | 7 | 107 | 129 | 219 | 2.02e-16 | 75.9 |
Find 44 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAGCAGCATTGAAATAT+TGG | 0.269149 | 8.2:-4339145 | MS.gene40739:CDS |
| AAGCTGTAGCTGCTTCTTCT+TGG | 0.308304 | 8.2:+4335486 | None:intergenic |
| ATAACGGCTGAGATCGAAAT+TGG | 0.311170 | 8.2:+4335421 | None:intergenic |
| GTCATCGTTGCTATTATTGT+TGG | 0.330644 | 8.2:+4335382 | None:intergenic |
| GATTAATACTCACCTTCTTA+AGG | 0.332089 | 8.2:+4338942 | None:intergenic |
| TCTAGCAGCATTGAAATATT+GGG | 0.363825 | 8.2:-4339144 | MS.gene40739:CDS |
| AGCTGTAGCTGCTTCTTCTT+GGG | 0.378837 | 8.2:+4335487 | None:intergenic |
| CAATCAAGGGAGGAGTATAT+TGG | 0.384836 | 8.2:-4338967 | MS.gene40739:CDS |
| ATCTCAGCCGTTATATTAAG+TGG | 0.390059 | 8.2:-4335412 | MS.gene40739:CDS |
| AATTACCGGAAAATTAATAA+TGG | 0.409895 | 8.2:+4339112 | None:intergenic |
| GGCAATAAGTATCTTTATCT+CGG | 0.416691 | 8.2:-4337919 | MS.gene40739:CDS |
| TATCTTTATCTCGGAACATA+TGG | 0.418592 | 8.2:-4337910 | MS.gene40739:intron |
| TCATCGTTGCTATTATTGTT+GGG | 0.426434 | 8.2:+4335383 | None:intergenic |
| ATTTGTGGGACAAGAATTGT+TGG | 0.438001 | 8.2:-4339752 | MS.gene40739:CDS |
| GTTTAAGCCACTTAATATAA+CGG | 0.455696 | 8.2:+4335405 | None:intergenic |
| GTCGATATGAAGCTCATTTG+TGG | 0.463814 | 8.2:-4339767 | MS.gene40739:CDS |
| TCGATATGAAGCTCATTTGT+GGG | 0.483951 | 8.2:-4339766 | MS.gene40739:CDS |
| AATGAGTCTCAGAACAAGAA+AGG | 0.503226 | 8.2:-4339729 | MS.gene40739:CDS |
| GGAAGGTGGGAGGCACGGAT+TGG | 0.503282 | 8.2:-4337952 | MS.gene40739:CDS |
| TTCAGGTGCTTATGATAATG+AGG | 0.506979 | 8.2:-4339189 | MS.gene40739:intron |
| TCGATCAGGCACCGTTGGAC+AGG | 0.512931 | 8.2:-4339789 | MS.gene40739:CDS |
| CTGATTGTTGCAGTCTACCT+TGG | 0.514833 | 8.2:-4339579 | MS.gene40739:intron |
| ATGAGTCTCAGAACAAGAAA+GGG | 0.517662 | 8.2:-4339728 | MS.gene40739:CDS |
| TTGAAATGGAGAGTCAATCA+AGG | 0.532530 | 8.2:-4338981 | MS.gene40739:CDS |
| GACATCATCATAACGGAAGG+TGG | 0.545087 | 8.2:-4337966 | MS.gene40739:CDS |
| TACCATCGATCAGGCACCGT+TGG | 0.551468 | 8.2:-4339794 | MS.gene40739:CDS |
| AGTATATTGGATCCTTAAGA+AGG | 0.558908 | 8.2:-4338954 | MS.gene40739:intron |
| TGCTTATGATAATGAGGAGA+CGG | 0.567000 | 8.2:-4339183 | MS.gene40739:CDS |
| TGAAATGGAGAGTCAATCAA+GGG | 0.593771 | 8.2:-4338980 | MS.gene40739:CDS |
| GTCCAACGGTGCCTGATCGA+TGG | 0.596833 | 8.2:+4339792 | None:intergenic |
| TGTTCTAGACATCATCATAA+CGG | 0.603537 | 8.2:-4337973 | MS.gene40739:intron |
| ATAACGGAAGGTGGGAGGCA+CGG | 0.604592 | 8.2:-4337957 | MS.gene40739:CDS |
| CAGAACAAGAAAGGGAGACA+AGG | 0.613931 | 8.2:-4339720 | MS.gene40739:intron |
| ACATCATCATAACGGAAGGT+GGG | 0.615401 | 8.2:-4337965 | MS.gene40739:CDS |
| TGGTAACAGCATTAAGTCCA+CGG | 0.621825 | 8.2:+4335441 | None:intergenic |
| CTAGACATCATCATAACGGA+AGG | 0.629308 | 8.2:-4337969 | MS.gene40739:intron |
| CTAAATACAGAGGTGTAGCA+AGG | 0.631468 | 8.2:-4338807 | MS.gene40739:intron |
| CTAGCAGCATTGAAATATTG+GGG | 0.632471 | 8.2:-4339143 | MS.gene40739:CDS |
| CTTCATATCGACCTGTCCAA+CGG | 0.639587 | 8.2:+4339778 | None:intergenic |
| AGCAGCTACAGCTTATGACA+TGG | 0.665369 | 8.2:-4335477 | MS.gene40739:CDS |
| TCATCATAACGGAAGGTGGG+AGG | 0.671171 | 8.2:-4337962 | MS.gene40739:CDS |
| CGGGGAGTATCTAAATACAG+AGG | 0.707462 | 8.2:-4338817 | MS.gene40739:CDS |
| ATGGCAGCTATTGAATACCG+TGG | 0.709584 | 8.2:-4335458 | MS.gene40739:CDS |
| AATGGAGAGTCAATCAAGGG+AGG | 0.710747 | 8.2:-4338977 | MS.gene40739:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAATGTATAAATAA+AGG | - | chr8.2:4337795-4337814 | MS.gene40739:intron | 10.0% |
| !! | AGAAAAAATGTATAAATAAA+GGG | - | chr8.2:4337796-4337815 | MS.gene40739:intron | 10.0% |
| !! | TTAGCTATATATATTAATAT+TGG | + | chr8.2:4339512-4339531 | None:intergenic | 10.0% |
| !!! | ATTCTTAAAATAAGTTTTAT+AGG | + | chr8.2:4338234-4338253 | None:intergenic | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr8.2:4336791-4336810 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr8.2:4336743-4336762 | MS.gene40739:intron | 10.0% |
| !! | AAAATGCTATTAAATTAAGT+AGG | - | chr8.2:4339145-4339164 | MS.gene40739:CDS | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr8.2:4338737-4338756 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAATTAAGTA+GGG | - | chr8.2:4339146-4339165 | MS.gene40739:CDS | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8.2:4335795-4335814 | None:intergenic | 15.0% |
| !! | AACCCATATATATATATATA+AGG | - | chr8.2:4338661-4338680 | MS.gene40739:intron | 15.0% |
| !! | AACCCTTATATATATATATA+TGG | + | chr8.2:4338667-4338686 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8.2:4335794-4335813 | MS.gene40739:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr8.2:4338736-4338755 | None:intergenic | 15.0% |
| !! | ACCCATATATATATATATAA+GGG | - | chr8.2:4338662-4338681 | MS.gene40739:intron | 15.0% |
| !! | ACCCTTATATATATATATAT+GGG | + | chr8.2:4338666-4338685 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr8.2:4338927-4338946 | None:intergenic | 15.0% |
| !! | ATAATTAACCCTATATATAA+AGG | - | chr8.2:4339209-4339228 | MS.gene40739:intron | 15.0% |
| !! | GAAAAAATGTATAAATAAAG+GGG | - | chr8.2:4337797-4337816 | MS.gene40739:intron | 15.0% |
| !! | TAATTAAATACGATAAAAGT+TGG | + | chr8.2:4338104-4338123 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr8.2:4336458-4336477 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr8.2:4339057-4339076 | MS.gene40739:intron | 15.0% |
| !!! | AAAAATTTGATAATATGCAT+GGG | - | chr8.2:4339378-4339397 | MS.gene40739:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr8.2:4336819-4336838 | MS.gene40739:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr8.2:4335668-4335687 | None:intergenic | 15.0% |
| !!! | TAAAAATTTATCTTTTCCAA+AGG | - | chr8.2:4338132-4338151 | MS.gene40739:intron | 15.0% |
| !!! | TAAAAATTTGATAATATGCA+TGG | - | chr8.2:4339377-4339396 | MS.gene40739:intron | 15.0% |
| !!! | TACTAATAATTTTTTTTGAG+AGG | + | chr8.2:4337453-4337472 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr8.2:4335771-4335790 | None:intergenic | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr8.2:4336857-4336876 | None:intergenic | 15.0% |
| !! | AAAATCACACTTATTAAGAA+AGG | + | chr8.2:4338296-4338315 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGACTA+GGG | + | chr8.2:4338797-4338816 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8.2:4335785-4335804 | MS.gene40739:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8.2:4337820-4337839 | MS.gene40739:intron | 20.0% |
| !! | AAGTTGTTAAATACATCTTA+AGG | + | chr8.2:4338583-4338602 | None:intergenic | 20.0% |
| !! | AATTACCGGAAAATTAATAA+TGG | + | chr8.2:4336063-4336082 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8.2:4335708-4335727 | None:intergenic | 20.0% |
| !! | ATCTTATCTGACATTAAAAT+TGG | - | chr8.2:4339619-4339638 | MS.gene40739:intron | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr8.2:4336431-4336450 | MS.gene40739:intron | 20.0% |
| !! | TAAACAAATTTGAATTGACT+AGG | + | chr8.2:4338798-4338817 | None:intergenic | 20.0% |
| !! | TCAAAAAGAACTAATTGAAA+TGG | - | chr8.2:4336177-4336196 | MS.gene40739:intron | 20.0% |
| !! | TGAAACTAATTAATAAATCC+TGG | + | chr8.2:4336111-4336130 | None:intergenic | 20.0% |
| !!! | AAAACAATTTTCATTGGTTA+TGG | + | chr8.2:4338203-4338222 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCATTGGTTAT+GGG | + | chr8.2:4338202-4338221 | None:intergenic | 20.0% |
| !!! | AAGTACTTAAATGATTCTTT+TGG | + | chr8.2:4335940-4335959 | None:intergenic | 20.0% |
| !!! | AATTTTGCAATAACTTTTTG+CGG | + | chr8.2:4338892-4338911 | None:intergenic | 20.0% |
| !!! | ACTCATTCTAAAAAATAAGT+GGG | + | chr8.2:4338544-4338563 | None:intergenic | 20.0% |
| !!! | AGATACCATTATTAATTTTC+CGG | - | chr8.2:4336055-4336074 | MS.gene40739:intron | 20.0% |
| !!! | ATGTATCTAGTCTTTATTAT+AGG | - | chr8.2:4337067-4337086 | MS.gene40739:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8.2:4337930-4337949 | MS.gene40739:CDS | 20.0% |
| !!! | GATGTAAAAACAATTTTCAT+TGG | + | chr8.2:4338209-4338228 | None:intergenic | 20.0% |
| !!! | GGTCTTTTTGTTTATAATTT+GGG | + | chr8.2:4338083-4338102 | None:intergenic | 20.0% |
| !!! | TATAGAGTTTTAACTGTATA+AGG | + | chr8.2:4336418-4336437 | None:intergenic | 20.0% |
| !!! | TCATTTTGTAGTAAAAGAAA+AGG | + | chr8.2:4337339-4337358 | None:intergenic | 20.0% |
| !!! | TGGTCTTTTTGTTTATAATT+TGG | + | chr8.2:4338084-4338103 | None:intergenic | 20.0% |
| !!! | TTTTCCCTTTCTTATAATAT+GGG | - | chr8.2:4338315-4338334 | MS.gene40739:intron | 20.0% |
| !!! | TTTTTCCCTTTCTTATAATA+TGG | - | chr8.2:4338314-4338333 | MS.gene40739:intron | 20.0% |
| !!! | TTTTTCCTTATAATTTGAGA+CGG | + | chr8.2:4338042-4338061 | None:intergenic | 20.0% |
| ! | AAAAAGTGGTTAGAAATTAC+CGG | + | chr8.2:4336077-4336096 | None:intergenic | 25.0% |
| ! | AATAGAAGCAATGAATTGAA+TGG | + | chr8.2:4337599-4337618 | None:intergenic | 25.0% |
| ! | AATCCTCTCCTTTATATATA+GGG | + | chr8.2:4339220-4339239 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | + | chr8.2:4335828-4335847 | None:intergenic | 25.0% |
| ! | ACAACAATCTAAATTTAGGT+AGG | - | chr8.2:4337498-4337517 | MS.gene40739:intron | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+AGG | - | chr8.2:4338626-4338645 | MS.gene40739:intron | 25.0% |
| ! | AGGGAGTAAAAATCAATTTA+AGG | - | chr8.2:4337151-4337170 | MS.gene40739:intron | 25.0% |
| ! | AGGTACAACAATCTAAATTT+AGG | - | chr8.2:4337494-4337513 | MS.gene40739:intron | 25.0% |
| ! | ATTTAAACACAACTCACTTA+AGG | + | chr8.2:4339416-4339435 | None:intergenic | 25.0% |
| ! | CAATGCAGAAAAACAAATTA+GGG | + | chr8.2:4338765-4338784 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8.2:4337819-4337838 | MS.gene40739:intron | 25.0% |
| ! | GTACAGTAAATGTAAATAAG+AGG | - | chr8.2:4336669-4336688 | MS.gene40739:intron | 25.0% |
| ! | GTTTAAGCCACTTAATATAA+CGG | + | chr8.2:4339770-4339789 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr8.2:4336436-4336455 | MS.gene40739:intron | 25.0% |
| ! | TAAATTTAGATTGTTGTACC+TGG | + | chr8.2:4337495-4337514 | None:intergenic | 25.0% |
| ! | TATATATAAACTACGTACCA+AGG | + | chr8.2:4335613-4335632 | None:intergenic | 25.0% |
| ! | TCAATGCAGAAAAACAAATT+AGG | + | chr8.2:4338766-4338785 | None:intergenic | 25.0% |
| ! | TGGATGCATATTAAAAAAAG+TGG | + | chr8.2:4336091-4336110 | None:intergenic | 25.0% |
| ! | TTCTTAATTACACTCTTGTT+TGG | + | chr8.2:4336968-4336987 | None:intergenic | 25.0% |
| ! | TTCTTTGGTATCTATGAAAT+CGG | - | chr8.2:4339238-4339257 | MS.gene40739:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr8.2:4338479-4338498 | MS.gene40739:intron | 25.0% |
| !! | CACTCATTCTAAAAAATAAG+TGG | + | chr8.2:4338545-4338564 | None:intergenic | 25.0% |
| !! | CAGATAAGATATTGATTAGT+CGG | + | chr8.2:4339609-4339628 | None:intergenic | 25.0% |
| !! | TAAGCAAAACTTCATTTTCT+AGG | - | chr8.2:4337029-4337048 | MS.gene40739:intron | 25.0% |
| !! | TATATATATATGGGTTTGCT+AGG | + | chr8.2:4338657-4338676 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr8.2:4337907-4337926 | MS.gene40739:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr8.2:4339086-4339105 | MS.gene40739:intron | 25.0% |
| !!! | ACACCTACTAGTTTTTATTA+AGG | + | chr8.2:4338632-4338651 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTAATATGCATCC+AGG | - | chr8.2:4336090-4336109 | MS.gene40739:intron | 25.0% |
| !!! | GAATGCATTTAATTTTCCTT+TGG | + | chr8.2:4338151-4338170 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8.2:4337929-4337948 | MS.gene40739:CDS | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr8.2:4339085-4339104 | MS.gene40739:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr8.2:4337908-4337927 | MS.gene40739:intron | 25.0% |
| !!! | TGTTTGTTGTTGAGAAAAAT+TGG | + | chr8.2:4339571-4339590 | None:intergenic | 25.0% |
| !!! | TGTTTTAACTTCTTTTCATG+TGG | - | chr8.2:4335539-4335558 | MS.gene40739:intron | 25.0% |
| AAAAATTGCAGAAAAAGCAG+TGG | - | chr8.2:4336325-4336344 | MS.gene40739:intron | 30.0% | |
| AAGTAGTTAAATACACCCTA+AGG | + | chr8.2:4338437-4338456 | None:intergenic | 30.0% | |
| ACTCCCACATAAAAATTAGT+GGG | + | chr8.2:4338398-4338417 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr8.2:4336538-4336557 | MS.gene40739:intron | 30.0% | |
| AGTATATTGGATCCTTAAGA+AGG | - | chr8.2:4336218-4336237 | MS.gene40739:intron | 30.0% | |
| ATATAAAGGAGAGGATTCTT+TGG | - | chr8.2:4339223-4339242 | MS.gene40739:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr8.2:4339023-4339042 | None:intergenic | 30.0% | |
| CTATGGAGTAATAACTGAAT+TGG | + | chr8.2:4337628-4337647 | None:intergenic | 30.0% | |
| CTTGGACCGAAAATTATAAA+GGG | - | chr8.2:4336761-4336780 | MS.gene40739:intron | 30.0% | |
| GAATCCTCTCCTTTATATAT+AGG | + | chr8.2:4339221-4339240 | None:intergenic | 30.0% | |
| GAGCTTGATGTTAAAATTTC+AGG | - | chr8.2:4335966-4335985 | MS.gene40739:intron | 30.0% | |
| GATTAATACTCACCTTCTTA+AGG | + | chr8.2:4336233-4336252 | None:intergenic | 30.0% | |
| GGCAATAAGTATCTTTATCT+CGG | - | chr8.2:4337253-4337272 | MS.gene40739:intron | 30.0% | |
| GTATTATAGCAAATGCCTAT+AGG | - | chr8.2:4338503-4338522 | MS.gene40739:intron | 30.0% | |
| TAACCCTATATATAAAGGAG+AGG | - | chr8.2:4339214-4339233 | MS.gene40739:intron | 30.0% | |
| TAATATGCATGGGTGTATAT+TGG | - | chr8.2:4339388-4339407 | MS.gene40739:intron | 30.0% | |
| TATCTTTATCTCGGAACATA+TGG | - | chr8.2:4337262-4337281 | MS.gene40739:intron | 30.0% | |
| TCTTGGACCGAAAATTATAA+AGG | - | chr8.2:4336760-4336779 | MS.gene40739:intron | 30.0% | |
| TGTACGTATAAATGATCGTA+TGG | - | chr8.2:4337388-4337407 | MS.gene40739:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8.2:4337804-4337823 | MS.gene40739:intron | 30.0% | |
| ! | AATTGAATGGCACTTTTCTA+AGG | + | chr8.2:4337586-4337605 | None:intergenic | 30.0% |
| ! | ACACCCACTAATTTTTATGT+GGG | - | chr8.2:4338392-4338411 | MS.gene40739:intron | 30.0% |
| ! | ATCTAGCAGCATTGAAATAT+TGG | - | chr8.2:4336027-4336046 | MS.gene40739:intron | 30.0% |
| ! | CACAAGGTCTCTATTTTATA+AGG | - | chr8.2:4339177-4339196 | MS.gene40739:CDS | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr8.2:4338478-4338497 | MS.gene40739:intron | 30.0% |
| ! | GATGATGTCTAGAACATTAA+TGG | + | chr8.2:4337195-4337214 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr8.2:4336770-4336789 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr8.2:4337019-4337038 | None:intergenic | 30.0% |
| ! | TCATCGTTGCTATTATTGTT+GGG | + | chr8.2:4339792-4339811 | None:intergenic | 30.0% |
| ! | TCTAGCAGCATTGAAATATT+GGG | - | chr8.2:4336028-4336047 | MS.gene40739:intron | 30.0% |
| ! | TGTTCTAGACATCATCATAA+CGG | - | chr8.2:4337199-4337218 | MS.gene40739:intron | 30.0% |
| ! | TTTTACTCAATTACTCTCTC+CGG | - | chr8.2:4336997-4337016 | MS.gene40739:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8.2:4335877-4335896 | MS.gene40739:intron | 30.0% |
| !! | AAATTGATTTTTACTCCCTC+TGG | + | chr8.2:4337150-4337169 | None:intergenic | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | chr8.2:4336551-4336570 | None:intergenic | 30.0% |
| !! | TTCAAGGTCGCTATTTTATA+GGG | + | chr8.2:4338705-4338724 | None:intergenic | 30.0% |
| !! | TTTCAAGGTCGCTATTTTAT+AGG | + | chr8.2:4338706-4338725 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8.2:4335876-4335895 | None:intergenic | 30.0% |
| !!! | TTCTCTTGCTATTTTTTTCG+TGG | + | chr8.2:4337997-4338016 | None:intergenic | 30.0% |
| AAGTAGGGACTAAACTTTCA+AGG | + | chr8.2:4338721-4338740 | None:intergenic | 35.0% | |
| AATGAGTCTCAGAACAAGAA+AGG | - | chr8.2:4335443-4335462 | MS.gene40739:CDS | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr8.2:4336625-4336644 | MS.gene40739:intron | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr8.2:4337943-4337962 | MS.gene40739:CDS | 35.0% | |
| ATCTCAGCCGTTATATTAAG+TGG | - | chr8.2:4339760-4339779 | MS.gene40739:CDS | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr8.2:4337774-4337793 | None:intergenic | 35.0% | |
| ATGAGTCTCAGAACAAGAAA+GGG | - | chr8.2:4335444-4335463 | MS.gene40739:CDS | 35.0% | |
| ATTTGTGGGACAAGAATTGT+TGG | - | chr8.2:4335420-4335439 | MS.gene40739:CDS | 35.0% | |
| CAACAACAAACAGCTAAATC+TGG | - | chr8.2:4339579-4339598 | MS.gene40739:intron | 35.0% | |
| CACATGTACTCACATTCAAT+GGG | - | chr8.2:4337688-4337707 | MS.gene40739:intron | 35.0% | |
| CACTCCCACATAAAAATTAG+TGG | + | chr8.2:4338399-4338418 | None:intergenic | 35.0% | |
| CATGTGGCATTTCAATTCTA+TGG | - | chr8.2:4335555-4335574 | MS.gene40739:intron | 35.0% | |
| CCCTTTCTTATAATATGGGA+CGG | - | chr8.2:4338319-4338338 | MS.gene40739:intron | 35.0% | |
| CCGTCCCATATTATAAGAAA+GGG | + | chr8.2:4338322-4338341 | None:intergenic | 35.0% | |
| TCACATGTACTCACATTCAA+TGG | - | chr8.2:4337687-4337706 | MS.gene40739:intron | 35.0% | |
| TCAGTTATTACTCCATAGTG+TGG | - | chr8.2:4337630-4337649 | MS.gene40739:intron | 35.0% | |
| TCCGTCCCATATTATAAGAA+AGG | + | chr8.2:4338323-4338342 | None:intergenic | 35.0% | |
| TCGATATGAAGCTCATTTGT+GGG | - | chr8.2:4335406-4335425 | MS.gene40739:CDS | 35.0% | |
| TGAAATGGAGAGTCAATCAA+GGG | - | chr8.2:4336192-4336211 | MS.gene40739:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr8.2:4337132-4337151 | MS.gene40739:intron | 35.0% | |
| TTCTTATAATATGGGACGGA+GGG | - | chr8.2:4338323-4338342 | MS.gene40739:intron | 35.0% | |
| TTGAAATGGAGAGTCAATCA+AGG | - | chr8.2:4336191-4336210 | MS.gene40739:intron | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | chr8.2:4337131-4337150 | MS.gene40739:intron | 35.0% | |
| TTTCTTATAATATGGGACGG+AGG | - | chr8.2:4338322-4338341 | MS.gene40739:intron | 35.0% | |
| ! | AAAAAGCAGTGGTTTTTCAC+GGG | - | chr8.2:4336336-4336355 | MS.gene40739:intron | 35.0% |
| ! | CACACCCACTAATTTTTATG+TGG | - | chr8.2:4338391-4338410 | MS.gene40739:intron | 35.0% |
| ! | CTAGCAGCATTGAAATATTG+GGG | - | chr8.2:4336029-4336048 | MS.gene40739:intron | 35.0% |
| ! | GAAAAAGCAGTGGTTTTTCA+CGG | - | chr8.2:4336335-4336354 | MS.gene40739:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr8.2:4335746-4335765 | None:intergenic | 35.0% |
| ! | GTCATCGTTGCTATTATTGT+TGG | + | chr8.2:4339793-4339812 | None:intergenic | 35.0% |
| ! | TGCTTATGATAATGAGGAGA+CGG | - | chr8.2:4335989-4336008 | MS.gene40739:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr8.2:4335742-4335761 | None:intergenic | 35.0% |
| ! | TTCAGGTGCTTATGATAATG+AGG | - | chr8.2:4335983-4336002 | MS.gene40739:intron | 35.0% |
| ! | TTCCTTATAATTTGAGACGG+AGG | + | chr8.2:4338039-4338058 | None:intergenic | 35.0% |
| ! | TTTTAGCAAGCTACACCTTA+GGG | - | chr8.2:4338419-4338438 | MS.gene40739:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8.2:4335642-4335661 | None:intergenic | 35.0% |
| !!! | ACGCCCACTTATTTTTTAGA+AGG | + | chr8.2:4338485-4338504 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr8.2:4336829-4336848 | MS.gene40739:intron | 35.0% |
| AAACATTACTTCTTCCGTCC+CGG | + | chr8.2:4337965-4337984 | None:intergenic | 40.0% | |
| AAGTAGGGACTAAACTCACA+AGG | - | chr8.2:4339161-4339180 | MS.gene40739:CDS | 40.0% | |
| AAGTAGTTAAGTAGCTAGCC+AGG | - | chr8.2:4337474-4337493 | MS.gene40739:intron | 40.0% | |
| AATTACGTTGCAGTGAACCT+TGG | - | chr8.2:4336583-4336602 | MS.gene40739:intron | 40.0% | |
| ATAACGGCTGAGATCGAAAT+TGG | + | chr8.2:4339754-4339773 | None:intergenic | 40.0% | |
| ATTACGTTGCAGTGAACCTT+GGG | - | chr8.2:4336584-4336603 | MS.gene40739:intron | 40.0% | |
| CACTGCAACGTAATTCTAAG+AGG | + | chr8.2:4336578-4336597 | None:intergenic | 40.0% | |
| CTAATTTACGTTGAGTCCCA+AGG | + | chr8.2:4336603-4336622 | None:intergenic | 40.0% | |
| CTCCTCCGTCTCAAATTATA+AGG | - | chr8.2:4338034-4338053 | MS.gene40739:intron | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | - | chr8.2:4337944-4337963 | MS.gene40739:CDS | 40.0% | |
| GTCGATATGAAGCTCATTTG+TGG | - | chr8.2:4335405-4335424 | MS.gene40739:CDS | 40.0% | |
| GTGGCATTTCAATTCTATGG+TGG | - | chr8.2:4335558-4335577 | MS.gene40739:intron | 40.0% | |
| TGGTAACAGCATTAAGTCCA+CGG | + | chr8.2:4339734-4339753 | None:intergenic | 40.0% | |
| TGTACGTTAGCAACTCCTAT+AGG | + | chr8.2:4338521-4338540 | None:intergenic | 40.0% | |
| ! | AAAAGCAGTGGTTTTTCACG+GGG | - | chr8.2:4336337-4336356 | MS.gene40739:intron | 40.0% |
| ! | ACATCATCATAACGGAAGGT+GGG | - | chr8.2:4337207-4337226 | MS.gene40739:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr8.2:4337759-4337778 | None:intergenic | 40.0% |
| ! | CAATCAAGGGAGGAGTATAT+TGG | - | chr8.2:4336205-4336224 | MS.gene40739:intron | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr8.2:4337760-4337779 | None:intergenic | 40.0% |
| ! | CTAAATACAGAGGTGTAGCA+AGG | - | chr8.2:4336365-4336384 | MS.gene40739:intron | 40.0% |
| ! | CTAGACATCATCATAACGGA+AGG | - | chr8.2:4337203-4337222 | MS.gene40739:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr8.2:4335743-4335762 | None:intergenic | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr8.2:4336830-4336849 | MS.gene40739:intron | 40.0% |
| !! | GTTTTAGCAAGCTACACCTT+AGG | - | chr8.2:4338418-4338437 | MS.gene40739:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.2:4335881-4335900 | MS.gene40739:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.2:4335900-4335881 | None:intergenic | 40.0% |
| AAGCTGTAGCTGCTTCTTCT+TGG | + | chr8.2:4339689-4339708 | None:intergenic | 45.0% | |
| AATGGAGAGTCAATCAAGGG+AGG | - | chr8.2:4336195-4336214 | MS.gene40739:intron | 45.0% | |
| AGCAGCTACAGCTTATGACA+TGG | - | chr8.2:4339695-4339714 | MS.gene40739:intron | 45.0% | |
| AGCTGTAGCTGCTTCTTCTT+GGG | + | chr8.2:4339688-4339707 | None:intergenic | 45.0% | |
| ATGGCAGCTATTGAATACCG+TGG | - | chr8.2:4339714-4339733 | MS.gene40739:intron | 45.0% | |
| CAGAACAAGAAAGGGAGACA+AGG | - | chr8.2:4335452-4335471 | MS.gene40739:CDS | 45.0% | |
| CTGATTGTTGCAGTCTACCT+TGG | - | chr8.2:4335593-4335612 | MS.gene40739:intron | 45.0% | |
| CTTCATATCGACCTGTCCAA+CGG | + | chr8.2:4335397-4335416 | None:intergenic | 45.0% | |
| GTCCAATAAACTACTCCCTC+CGG | - | chr8.2:4337732-4337751 | MS.gene40739:intron | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr8.2:4337757-4337776 | MS.gene40739:intron | 45.0% |
| ! | GACATCATCATAACGGAAGG+TGG | - | chr8.2:4337206-4337225 | MS.gene40739:intron | 45.0% |
| ! | GGCTTTGCATGGGTTATGTA+TGG | - | chr8.2:4337651-4337670 | MS.gene40739:intron | 45.0% |
| ! | TCCATAGTGTGGCTTTGCAT+GGG | - | chr8.2:4337641-4337660 | MS.gene40739:intron | 45.0% |
| !! | CGGGGAGTATCTAAATACAG+AGG | - | chr8.2:4336355-4336374 | MS.gene40739:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.2:4335880-4335899 | MS.gene40739:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.2:4335899-4335880 | None:intergenic | 45.0% |
| !!! | GCACGGATTGGCAAAGTTTT+TGG | - | chr8.2:4337232-4337251 | MS.gene40739:intron | 45.0% |
| !!! | AATTAAATTTTTATATAACA+CGG | + | chr8.2:4339455-4339474 | None:intergenic | 5.0% |
| !!! | ATAAGTAATTTTTTTTTATA+GGG | - | chr8.2:4339118-4339137 | MS.gene40739:CDS | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr8.2:4336792-4336811 | None:intergenic | 5.0% |
| !!! | TATAAGTAATTTTTTTTTAT+AGG | - | chr8.2:4339117-4339136 | MS.gene40739:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr8.2:4336846-4336865 | None:intergenic | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr8.2:4336845-4336864 | None:intergenic | 50.0% | |
| ACCCATGCAAAGCCACACTA+TGG | + | chr8.2:4337645-4337664 | None:intergenic | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr8.2:4337948-4337967 | MS.gene40739:CDS | 50.0% | |
| GACCGGAGGGAGTAGTTTAT+TGG | + | chr8.2:4337737-4337756 | None:intergenic | 50.0% | |
| TCAGATAAAACGGGACCGGA+GGG | + | chr8.2:4337750-4337769 | None:intergenic | 50.0% | |
| TGGCTCAGATAAAACGGGAC+CGG | + | chr8.2:4337754-4337773 | None:intergenic | 50.0% | |
| ! | CTCCATAGTGTGGCTTTGCA+TGG | - | chr8.2:4337640-4337659 | MS.gene40739:intron | 50.0% |
| ! | TCATCATAACGGAAGGTGGG+AGG | - | chr8.2:4337210-4337229 | MS.gene40739:intron | 50.0% |
| CTCAGATAAAACGGGACCGG+AGG | + | chr8.2:4337751-4337770 | None:intergenic | 55.0% | |
| ! | ATAACGGAAGGTGGGAGGCA+CGG | - | chr8.2:4337215-4337234 | MS.gene40739:intron | 55.0% |
| ! | TACCATCGATCAGGCACCGT+TGG | - | chr8.2:4335378-4335397 | MS.gene40739:CDS | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr8.2:4336835-4336854 | MS.gene40739:intron | 60.0% | |
| GTCCAACGGTGCCTGATCGA+TGG | + | chr8.2:4335383-4335402 | None:intergenic | 60.0% | |
| ! | TCGATCAGGCACCGTTGGAC+AGG | - | chr8.2:4335383-4335402 | MS.gene40739:CDS | 60.0% |
| ! | GGAAGGTGGGAGGCACGGAT+TGG | - | chr8.2:4337220-4337239 | MS.gene40739:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 4335374 | 4339820 | 4335374 | ID=MS.gene40739 |
| chr8.2 | mRNA | 4335374 | 4339820 | 4335374 | ID=MS.gene40739.t1;Parent=MS.gene40739 |
| chr8.2 | exon | 4339721 | 4339820 | 4339721 | ID=MS.gene40739.t1.exon1;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4339721 | 4339820 | 4339721 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4339580 | 4339588 | 4339580 | ID=MS.gene40739.t1.exon2;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4339580 | 4339588 | 4339580 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4339118 | 4339206 | 4339118 | ID=MS.gene40739.t1.exon3;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4339118 | 4339206 | 4339118 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4338955 | 4339028 | 4338955 | ID=MS.gene40739.t1.exon4;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4338955 | 4339028 | 4338955 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4338808 | 4338858 | 4338808 | ID=MS.gene40739.t1.exon5;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4338808 | 4338858 | 4338808 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4337911 | 4337987 | 4337911 | ID=MS.gene40739.t1.exon6;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4337911 | 4337987 | 4337911 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| chr8.2 | exon | 4335374 | 4335512 | 4335374 | ID=MS.gene40739.t1.exon7;Parent=MS.gene40739.t1 |
| chr8.2 | CDS | 4335374 | 4335512 | 4335374 | ID=cds.MS.gene40739.t1;Parent=MS.gene40739.t1 |
| Gene Sequence |
| Protein sequence |
