Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42097.t1 | XP_003623535.1 | 70.1 | 194 | 57 | 1 | 2 | 194 | 17 | 210 | 1.20E-70 | 276.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42097.t1 | Q9LZX1 | 49.0 | 194 | 98 | 1 | 2 | 194 | 21 | 214 | 2.1e-52 | 206.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42097.t1 | G7KW17 | 70.1 | 194 | 57 | 1 | 2 | 194 | 17 | 210 | 8.6e-71 | 276.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42097 | MS.gene87768 | PPI |
| MS.gene87041 | MS.gene42097 | PPI |
| MS.gene009719 | MS.gene42097 | PPI |
| MS.gene42097 | MS.gene81036 | PPI |
| MS.gene42097 | MS.gene87762 | PPI |
| MS.gene87769 | MS.gene42097 | PPI |
| MS.gene42097 | MS.gene87038 | PPI |
| MS.gene42097 | MS.gene009718 | PPI |
| MS.gene99704 | MS.gene42097 | PPI |
| MS.gene26305 | MS.gene42097 | PPI |
| MS.gene42848 | MS.gene42097 | PPI |
| MS.gene42103 | MS.gene42097 | PPI |
| MS.gene42098 | MS.gene42097 | PPI |
| MS.gene42097 | MS.gene42096 | PPI |
| MS.gene87043 | MS.gene42097 | PPI |
| MS.gene87765 | MS.gene42097 | PPI |
| MS.gene051028 | MS.gene42097 | PPI |
| MS.gene87767 | MS.gene42097 | PPI |
| MS.gene87039 | MS.gene42097 | PPI |
| MS.gene42099 | MS.gene42097 | PPI |
| MS.gene42097 | MS.gene91238 | PPI |
| MS.gene42091 | MS.gene42097 | PPI |
| MS.gene91237 | MS.gene42097 | PPI |
| MS.gene42100 | MS.gene42097 | PPI |
| MS.gene42097 | MS.gene25045 | PPI |
| MS.gene42097 | MS.gene87046 | PPI |
| MS.gene87040 | MS.gene42097 | PPI |
| MS.gene99705 | MS.gene42097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42097.t1 | MTR_7g072120 | 84.021 | 194 | 30 | 1 | 2 | 194 | 17 | 210 | 3.09e-125 | 352 |
| MS.gene42097.t1 | MTR_7g072270 | 80.829 | 193 | 37 | 0 | 1 | 193 | 15 | 207 | 1.55e-119 | 337 |
| MS.gene42097.t1 | MTR_7g072170 | 81.538 | 195 | 35 | 1 | 1 | 194 | 16 | 210 | 1.80e-119 | 338 |
| MS.gene42097.t1 | MTR_7g072140 | 80.000 | 195 | 38 | 1 | 1 | 194 | 16 | 210 | 2.17e-117 | 332 |
| MS.gene42097.t1 | MTR_7g072250 | 68.812 | 202 | 49 | 2 | 1 | 192 | 40 | 237 | 1.32e-97 | 283 |
| MS.gene42097.t1 | MTR_7g072270 | 80.132 | 151 | 30 | 0 | 1 | 151 | 15 | 165 | 1.39e-91 | 265 |
| MS.gene42097.t1 | MTR_7g071710 | 94.915 | 118 | 6 | 0 | 78 | 195 | 1 | 118 | 2.03e-81 | 237 |
| MS.gene42097.t1 | MTR_4g029430 | 59.259 | 189 | 72 | 2 | 6 | 193 | 13 | 197 | 2.83e-80 | 238 |
| MS.gene42097.t1 | MTR_1g014180 | 50.538 | 186 | 82 | 5 | 8 | 188 | 5 | 185 | 9.05e-58 | 180 |
| MS.gene42097.t1 | MTR_1g014150 | 45.652 | 184 | 92 | 4 | 6 | 187 | 11 | 188 | 4.21e-46 | 150 |
| MS.gene42097.t1 | MTR_1g014160 | 39.362 | 188 | 89 | 6 | 18 | 187 | 59 | 239 | 5.54e-29 | 108 |
| MS.gene42097.t1 | MTR_2g103840 | 30.539 | 167 | 108 | 5 | 31 | 193 | 42 | 204 | 4.74e-23 | 92.4 |
| MS.gene42097.t1 | MTR_5g074550 | 30.556 | 180 | 110 | 6 | 18 | 187 | 17 | 191 | 8.83e-21 | 85.5 |
| MS.gene42097.t1 | MTR_4g010180 | 27.545 | 167 | 115 | 5 | 31 | 194 | 31 | 194 | 9.19e-21 | 85.9 |
| MS.gene42097.t1 | MTR_2g103850 | 29.167 | 168 | 111 | 5 | 31 | 194 | 43 | 206 | 6.55e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42097.t1 | AT5G01750 | 57.868 | 197 | 78 | 2 | 3 | 194 | 18 | 214 | 6.13e-90 | 263 |
| MS.gene42097.t1 | AT3G11740 | 58.730 | 189 | 76 | 2 | 8 | 194 | 3 | 191 | 1.01e-82 | 243 |
| MS.gene42097.t1 | AT2G14560 | 50.777 | 193 | 93 | 2 | 1 | 192 | 1 | 192 | 1.51e-70 | 213 |
| MS.gene42097.t1 | AT2G14560 | 50.777 | 193 | 93 | 2 | 1 | 192 | 61 | 252 | 2.20e-69 | 212 |
| MS.gene42097.t1 | AT1G33840 | 50.811 | 185 | 90 | 1 | 8 | 191 | 27 | 211 | 1.98e-68 | 208 |
| MS.gene42097.t1 | AT5G01750 | 56.129 | 155 | 63 | 2 | 3 | 152 | 18 | 172 | 2.28e-65 | 199 |
| MS.gene42097.t1 | AT2G14560 | 49.351 | 154 | 76 | 2 | 1 | 153 | 1 | 153 | 9.09e-55 | 172 |
| MS.gene42097.t1 | AT2G14560 | 49.351 | 154 | 76 | 2 | 1 | 153 | 61 | 213 | 1.17e-53 | 171 |
| MS.gene42097.t1 | AT1G33840 | 47.619 | 147 | 76 | 1 | 8 | 153 | 27 | 173 | 2.20e-50 | 161 |
| MS.gene42097.t1 | AT3G16900 | 42.703 | 185 | 86 | 4 | 8 | 191 | 15 | 180 | 4.08e-49 | 158 |
| MS.gene42097.t1 | AT3G56180 | 35.567 | 194 | 118 | 4 | 4 | 193 | 14 | 204 | 6.49e-37 | 127 |
| MS.gene42097.t1 | AT3G56180 | 35.052 | 194 | 117 | 5 | 4 | 193 | 14 | 202 | 1.22e-34 | 121 |
| MS.gene42097.t1 | AT3G10986 | 33.684 | 190 | 119 | 4 | 7 | 189 | 3 | 192 | 1.39e-30 | 111 |
| MS.gene42097.t1 | AT3G15810 | 32.143 | 168 | 104 | 6 | 31 | 194 | 44 | 205 | 2.71e-24 | 95.5 |
| MS.gene42097.t1 | AT1G80120 | 32.738 | 168 | 106 | 4 | 31 | 194 | 30 | 194 | 1.38e-19 | 82.8 |
| MS.gene42097.t1 | AT2G38640 | 31.953 | 169 | 106 | 5 | 25 | 190 | 30 | 192 | 1.57e-16 | 74.3 |
| MS.gene42097.t1 | AT5G20640 | 28.729 | 181 | 112 | 5 | 28 | 193 | 33 | 211 | 7.23e-15 | 70.5 |
| MS.gene42097.t1 | AT2G05910 | 28.402 | 169 | 100 | 7 | 31 | 190 | 28 | 184 | 1.75e-13 | 66.2 |
| MS.gene42097.t1 | AT5G41590 | 24.432 | 176 | 123 | 4 | 25 | 190 | 44 | 219 | 3.77e-11 | 60.5 |
Find 51 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTCACAAATATCTTCTT+TGG | 0.245817 | 7.3:+32513513 | None:intergenic |
| CTTGCGACGTAGGGTGGTTA+TGG | 0.262386 | 7.3:+32514252 | None:intergenic |
| ATTTGGTCTTCAACTGCAAT+AGG | 0.271974 | 7.3:+32513560 | None:intergenic |
| TGATCGGTGGGAAGCTTATA+GGG | 0.301757 | 7.3:-32513632 | MS.gene42097:CDS |
| ATGATCGGTGGGAAGCTTAT+AGG | 0.312103 | 7.3:-32513633 | MS.gene42097:CDS |
| GGATTTGGCGGTCGTGAAAA+AGG | 0.350662 | 7.3:-32514395 | MS.gene42097:CDS |
| TTGCGACGTAGGGTGGTTAT+GGG | 0.360381 | 7.3:+32514253 | None:intergenic |
| GCACCCACCACCACCATATT+CGG | 0.364115 | 7.3:-32514445 | MS.gene42097:CDS |
| AGCTAGAAACACATCTAATT+TGG | 0.366171 | 7.3:+32513543 | None:intergenic |
| GTGGTGGTGGGTGCCGGCAT+CGG | 0.380802 | 7.3:+32514454 | None:intergenic |
| ACAATATTGAGATCCGAATA+TGG | 0.391065 | 7.3:+32514432 | None:intergenic |
| GTTGCCATTGACATCTTTAA+CGG | 0.392620 | 7.3:+32514348 | None:intergenic |
| TGCTCCGTATCCAGTGGATT+TGG | 0.401326 | 7.3:-32514410 | MS.gene42097:CDS |
| TTTGGTCTTCAACTGCAATA+GGG | 0.412568 | 7.3:+32513561 | None:intergenic |
| ACTTTAAAGTCAAAGGTAGT+TGG | 0.429380 | 7.3:-32513495 | MS.gene42097:CDS |
| CGATCTTGCATTATTTATGC+AGG | 0.445806 | 7.3:-32513466 | MS.gene42097:CDS |
| AATATGGTGGTGGTGGGTGC+CGG | 0.451025 | 7.3:+32514448 | None:intergenic |
| CCTCCGTGATCGCCGTGTCT+TGG | 0.452683 | 7.3:-32514293 | MS.gene42097:CDS |
| TTCACGACCGCCAAATCCAC+TGG | 0.473461 | 7.3:+32514400 | None:intergenic |
| CGTGTCTTGGTTGATGCTGC+TGG | 0.478066 | 7.3:-32514280 | MS.gene42097:CDS |
| ATGAAAGCGTAATCAACATT+GGG | 0.498374 | 7.3:+32513196 | None:intergenic |
| AAATTAGATGTGTTTCTAGC+TGG | 0.501483 | 7.3:-32513541 | MS.gene42097:CDS |
| GCGATCACGGAGGGTTAAGA+AGG | 0.515037 | 7.3:+32514303 | None:intergenic |
| TAAAGTCAAAGGTAGTTGGT+TGG | 0.515691 | 7.3:-32513491 | MS.gene42097:CDS |
| TATGAAAGCGTAATCAACAT+TGG | 0.519673 | 7.3:+32513195 | None:intergenic |
| ATTTGTGACTTTAAAGTCAA+AGG | 0.520188 | 7.3:-32513502 | MS.gene42097:CDS |
| AACGGTGAAGTTGTCTGCCA+TGG | 0.529412 | 7.3:+32514366 | None:intergenic |
| TACTAACAACATTGTTGCAC+AGG | 0.530405 | 7.3:-32513440 | MS.gene42097:intron |
| CAACCAAGACACGGCGATCA+CGG | 0.533888 | 7.3:+32514290 | None:intergenic |
| TGTTGATTACGCTTTCATAG+TGG | 0.534696 | 7.3:-32513191 | MS.gene42097:CDS |
| TGAAAGTACCTTGCGACGTA+GGG | 0.537454 | 7.3:+32514243 | None:intergenic |
| ACCGCCAAATCCACTGGATA+CGG | 0.545681 | 7.3:+32514406 | None:intergenic |
| AGATCCGAATATGGTGGTGG+TGG | 0.561587 | 7.3:+32514441 | None:intergenic |
| TCCGTATCCAGTGGATTTGG+CGG | 0.571007 | 7.3:-32514407 | MS.gene42097:CDS |
| TTGAAAGTACCTTGCGACGT+AGG | 0.573670 | 7.3:+32514242 | None:intergenic |
| AGTGACTATGCATGATCGGT+GGG | 0.580863 | 7.3:-32513644 | MS.gene42097:CDS |
| TTCACCGTTAAAGATGTCAA+TGG | 0.593126 | 7.3:-32514352 | MS.gene42097:CDS |
| CATAACCACCCTACGTCGCA+AGG | 0.600007 | 7.3:-32514251 | MS.gene42097:intron |
| CAAGACACGGCGATCACGGA+GGG | 0.603514 | 7.3:+32514294 | None:intergenic |
| AAGTACCTTGCGACGTAGGG+TGG | 0.605892 | 7.3:+32514246 | None:intergenic |
| TAGTGACTATGCATGATCGG+TGG | 0.614019 | 7.3:-32513645 | MS.gene42097:CDS |
| AACGTCGTGTTCAAAGTGAA+AGG | 0.614534 | 7.3:-32514328 | MS.gene42097:CDS |
| GATCGGTGGGAAGCTTATAG+GGG | 0.623792 | 7.3:-32513631 | MS.gene42097:CDS |
| AGATAGTGACTATGCATGAT+CGG | 0.644746 | 7.3:-32513648 | MS.gene42097:CDS |
| ATATTGTGCTCCGTATCCAG+TGG | 0.650396 | 7.3:-32514416 | MS.gene42097:CDS |
| TTGAGATCCGAATATGGTGG+TGG | 0.650739 | 7.3:+32514438 | None:intergenic |
| TGCGACGTAGGGTGGTTATG+GGG | 0.653394 | 7.3:+32514254 | None:intergenic |
| CAGCAGCATCAACCAAGACA+CGG | 0.658669 | 7.3:+32514281 | None:intergenic |
| GATCCGAATATGGTGGTGGT+GGG | 0.674694 | 7.3:+32514442 | None:intergenic |
| CCAAGACACGGCGATCACGG+AGG | 0.703726 | 7.3:+32514293 | None:intergenic |
| ATATTGAGATCCGAATATGG+TGG | 0.748524 | 7.3:+32514435 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAAAAATAACTAGT+AGG | - | chr7.3:32513475-32513494 | MS.gene42097:CDS | 10.0% |
| !! | TTTGTACCAAAAAAAATATA+AGG | - | chr7.3:32514236-32514255 | MS.gene42097:intron | 15.0% |
| !!! | ATTCTATTAAGTTGTATTAT+TGG | - | chr7.3:32513924-32513943 | MS.gene42097:intron | 15.0% |
| !!! | GTAAAACCTTATATTTTTTT+TGG | + | chr7.3:32514245-32514264 | None:intergenic | 15.0% |
| !! | ATCATTAAACAACACTTTAT+TGG | + | chr7.3:32513906-32513925 | None:intergenic | 20.0% |
| !! | TCATTAAACAACACTTTATT+GGG | + | chr7.3:32513905-32513924 | None:intergenic | 20.0% |
| !! | TTTGATTGGATTATAACTTA+AGG | - | chr7.3:32514265-32514284 | MS.gene42097:CDS | 20.0% |
| !!! | AGTATATACAAGAGTATATA+AGG | - | chr7.3:32514200-32514219 | MS.gene42097:intron | 20.0% |
| !!! | ATATAAGGTTTTACTTTGAT+TGG | - | chr7.3:32514251-32514270 | MS.gene42097:intron | 20.0% |
| !!! | TATTTTTTTTGGTACAAAAG+AGG | + | chr7.3:32514234-32514253 | None:intergenic | 20.0% |
| ! | AAAGTCACAAATATCTTCTT+TGG | + | chr7.3:32514088-32514107 | None:intergenic | 25.0% |
| ! | AATGTGTGAATTTCAACAAT+TGG | - | chr7.3:32513792-32513811 | MS.gene42097:intron | 25.0% |
| ! | TTGGGATATATGAAGTATAA+TGG | + | chr7.3:32513887-32513906 | None:intergenic | 25.0% |
| !!! | ATTTGTGACTTTAAAGTCAA+AGG | - | chr7.3:32514096-32514115 | MS.gene42097:intron | 25.0% |
| !!! | CAAAAAATTGTTTTGCTCAA+TGG | - | chr7.3:32513763-32513782 | MS.gene42097:intron | 25.0% |
| ACAATATTGAGATCCGAATA+TGG | + | chr7.3:32513169-32513188 | None:intergenic | 30.0% | |
| AGCTAGAAACACATCTAATT+TGG | + | chr7.3:32514058-32514077 | None:intergenic | 30.0% | |
| ! | ATGAAAGCGTAATCAACATT+GGG | + | chr7.3:32514405-32514424 | None:intergenic | 30.0% |
| ! | TATGAAAGCGTAATCAACAT+TGG | + | chr7.3:32514406-32514425 | None:intergenic | 30.0% |
| !! | AAATTAGATGTGTTTCTAGC+TGG | - | chr7.3:32514057-32514076 | MS.gene42097:intron | 30.0% |
| !! | ACTTTAAAGTCAAAGGTAGT+TGG | - | chr7.3:32514103-32514122 | MS.gene42097:intron | 30.0% |
| AGATAGTGACTATGCATGAT+CGG | - | chr7.3:32513950-32513969 | MS.gene42097:intron | 35.0% | |
| ATATTGAGATCCGAATATGG+TGG | + | chr7.3:32513166-32513185 | None:intergenic | 35.0% | |
| CGATCTTGCATTATTTATGC+AGG | - | chr7.3:32514132-32514151 | MS.gene42097:intron | 35.0% | |
| GTTGCCATTGACATCTTTAA+CGG | + | chr7.3:32513253-32513272 | None:intergenic | 35.0% | |
| TAAAGTCAAAGGTAGTTGGT+TGG | - | chr7.3:32514107-32514126 | MS.gene42097:intron | 35.0% | |
| TACTAACAACATTGTTGCAC+AGG | - | chr7.3:32514158-32514177 | MS.gene42097:intron | 35.0% | |
| TTCACCGTTAAAGATGTCAA+TGG | - | chr7.3:32513246-32513265 | MS.gene42097:CDS | 35.0% | |
| ! | ATTTGGTCTTCAACTGCAAT+AGG | + | chr7.3:32514041-32514060 | None:intergenic | 35.0% |
| ! | TGTTGATTACGCTTTCATAG+TGG | - | chr7.3:32514407-32514426 | MS.gene42097:CDS | 35.0% |
| ! | TTTGGTCTTCAACTGCAATA+GGG | + | chr7.3:32514040-32514059 | None:intergenic | 35.0% |
| AACGTCGTGTTCAAAGTGAA+AGG | - | chr7.3:32513270-32513289 | MS.gene42097:intron | 40.0% | |
| CGTGAAAAAGGTAATGACCA+TGG | - | chr7.3:32513215-32513234 | MS.gene42097:CDS | 40.0% | |
| ACTAGTAGGACATCCGAGTA+TGG | - | chr7.3:32513489-32513508 | MS.gene42097:CDS | 45.0% | |
| AGTGACTATGCATGATCGGT+GGG | - | chr7.3:32513954-32513973 | MS.gene42097:intron | 45.0% | |
| ATATTGTGCTCCGTATCCAG+TGG | - | chr7.3:32513182-32513201 | MS.gene42097:CDS | 45.0% | |
| ATGATCGGTGGGAAGCTTAT+AGG | - | chr7.3:32513965-32513984 | MS.gene42097:intron | 45.0% | |
| CAACTACGTGAGTCCATACT+CGG | + | chr7.3:32513505-32513524 | None:intergenic | 45.0% | |
| TAGTGACTATGCATGATCGG+TGG | - | chr7.3:32513953-32513972 | MS.gene42097:intron | 45.0% | |
| TGATCGGTGGGAAGCTTATA+GGG | - | chr7.3:32513966-32513985 | MS.gene42097:intron | 45.0% | |
| TTGAGATCCGAATATGGTGG+TGG | + | chr7.3:32513163-32513182 | None:intergenic | 45.0% | |
| !! | TGAAAGTACCTTGCGACGTA+GGG | + | chr7.3:32513358-32513377 | None:intergenic | 45.0% |
| !! | TTGAAAGTACCTTGCGACGT+AGG | + | chr7.3:32513359-32513378 | None:intergenic | 45.0% |
| AACGGTGAAGTTGTCTGCCA+TGG | + | chr7.3:32513235-32513254 | None:intergenic | 50.0% | |
| ACCGCCAAATCCACTGGATA+CGG | + | chr7.3:32513195-32513214 | None:intergenic | 50.0% | |
| CAGCAGCATCAACCAAGACA+CGG | + | chr7.3:32513320-32513339 | None:intergenic | 50.0% | |
| GATCGGTGGGAAGCTTATAG+GGG | - | chr7.3:32513967-32513986 | MS.gene42097:intron | 50.0% | |
| GGATTTGGCGGTCGTGAAAA+AGG | - | chr7.3:32513203-32513222 | MS.gene42097:CDS | 50.0% | |
| TTGCGACGTAGGGTGGTTAT+GGG | + | chr7.3:32513348-32513367 | None:intergenic | 50.0% | |
| ! | TCCGTATCCAGTGGATTTGG+CGG | - | chr7.3:32513191-32513210 | MS.gene42097:CDS | 50.0% |
| ! | TGCTCCGTATCCAGTGGATT+TGG | - | chr7.3:32513188-32513207 | MS.gene42097:CDS | 50.0% |
| !! | AGATCCGAATATGGTGGTGG+TGG | + | chr7.3:32513160-32513179 | None:intergenic | 50.0% |
| !! | GATCCGAATATGGTGGTGGT+GGG | + | chr7.3:32513159-32513178 | None:intergenic | 50.0% |
| AAGTACCTTGCGACGTAGGG+TGG | + | chr7.3:32513355-32513374 | None:intergenic | 55.0% | |
| CAACCAAGACACGGCGATCA+CGG | + | chr7.3:32513311-32513330 | None:intergenic | 55.0% | |
| CATAACCACCCTACGTCGCA+AGG | - | chr7.3:32513347-32513366 | MS.gene42097:intron | 55.0% | |
| CTTGCGACGTAGGGTGGTTA+TGG | + | chr7.3:32513349-32513368 | None:intergenic | 55.0% | |
| GCACCCACCACCACCATATT+CGG | - | chr7.3:32513153-32513172 | MS.gene42097:CDS | 55.0% | |
| GCGATCACGGAGGGTTAAGA+AGG | + | chr7.3:32513298-32513317 | None:intergenic | 55.0% | |
| TGCGACGTAGGGTGGTTATG+GGG | + | chr7.3:32513347-32513366 | None:intergenic | 55.0% | |
| TTCACGACCGCCAAATCCAC+TGG | + | chr7.3:32513201-32513220 | None:intergenic | 55.0% | |
| ! | CGTGTCTTGGTTGATGCTGC+TGG | - | chr7.3:32513318-32513337 | MS.gene42097:intron | 55.0% |
| !! | AATATGGTGGTGGTGGGTGC+CGG | + | chr7.3:32513153-32513172 | None:intergenic | 55.0% |
| CAAGACACGGCGATCACGGA+GGG | + | chr7.3:32513307-32513326 | None:intergenic | 60.0% | |
| CCAAGACACGGCGATCACGG+AGG | + | chr7.3:32513308-32513327 | None:intergenic | 65.0% | |
| CCTCCGTGATCGCCGTGTCT+TGG | - | chr7.3:32513305-32513324 | MS.gene42097:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 32513147 | 32514473 | 32513147 | ID=MS.gene42097 |
| chr7.3 | mRNA | 32513147 | 32514473 | 32513147 | ID=MS.gene42097.t1;Parent=MS.gene42097 |
| chr7.3 | exon | 32514252 | 32514473 | 32514252 | ID=MS.gene42097.t1.exon1;Parent=MS.gene42097.t1 |
| chr7.3 | CDS | 32514252 | 32514473 | 32514252 | ID=cds.MS.gene42097.t1;Parent=MS.gene42097.t1 |
| chr7.3 | exon | 32513441 | 32513668 | 32513441 | ID=MS.gene42097.t1.exon2;Parent=MS.gene42097.t1 |
| chr7.3 | CDS | 32513441 | 32513668 | 32513441 | ID=cds.MS.gene42097.t1;Parent=MS.gene42097.t1 |
| chr7.3 | exon | 32513147 | 32513284 | 32513147 | ID=MS.gene42097.t1.exon3;Parent=MS.gene42097.t1 |
| chr7.3 | CDS | 32513147 | 32513284 | 32513147 | ID=cds.MS.gene42097.t1;Parent=MS.gene42097.t1 |
| Gene Sequence |
| Protein sequence |
