Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42103.t1 | XP_004492957.1 | 66.4 | 211 | 62 | 2 | 1 | 202 | 1 | 211 | 8.00E-70 | 273.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42103.t1 | Q9LZX1 | 48.0 | 200 | 103 | 1 | 4 | 202 | 15 | 214 | 8.5e-52 | 204.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42103.t1 | A0A1S2XRT7 | 66.4 | 211 | 62 | 2 | 1 | 202 | 1 | 211 | 5.8e-70 | 273.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42103 | MS.gene87041 | PPI |
| MS.gene99705 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene42848 | PPI |
| MS.gene42103 | MS.gene87039 | PPI |
| MS.gene42103 | MS.gene42099 | PPI |
| MS.gene42103 | MS.gene91238 | PPI |
| MS.gene91237 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene87040 | PPI |
| MS.gene42103 | MS.gene25045 | PPI |
| MS.gene42103 | MS.gene87046 | PPI |
| MS.gene42103 | MS.gene87768 | PPI |
| MS.gene42103 | MS.gene81036 | PPI |
| MS.gene42103 | MS.gene87769 | PPI |
| MS.gene42103 | MS.gene009718 | PPI |
| MS.gene42103 | MS.gene99705 | PPI |
| MS.gene42103 | MS.gene42100 | PPI |
| MS.gene26305 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene42097 | PPI |
| MS.gene009719 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene87762 | PPI |
| MS.gene42103 | MS.gene42091 | PPI |
| MS.gene42103 | MS.gene87765 | PPI |
| MS.gene42103 | MS.gene42096 | PPI |
| MS.gene42098 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene87038 | PPI |
| MS.gene051028 | MS.gene42103 | PPI |
| MS.gene87767 | MS.gene42103 | PPI |
| MS.gene42103 | MS.gene99704 | PPI |
| MS.gene87043 | MS.gene42103 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42103.t1 | MTR_7g072120 | 82.381 | 210 | 29 | 4 | 1 | 202 | 1 | 210 | 7.89e-128 | 358 |
| MS.gene42103.t1 | MTR_7g072170 | 80.000 | 210 | 34 | 2 | 1 | 202 | 1 | 210 | 1.32e-124 | 351 |
| MS.gene42103.t1 | MTR_7g072270 | 79.227 | 207 | 37 | 1 | 1 | 201 | 1 | 207 | 2.67e-124 | 350 |
| MS.gene42103.t1 | MTR_7g072140 | 78.571 | 210 | 37 | 2 | 1 | 202 | 1 | 210 | 1.36e-122 | 345 |
| MS.gene42103.t1 | MTR_7g072250 | 67.281 | 217 | 50 | 3 | 1 | 200 | 25 | 237 | 1.73e-100 | 291 |
| MS.gene42103.t1 | MTR_7g072270 | 78.182 | 165 | 30 | 1 | 1 | 159 | 1 | 165 | 2.56e-96 | 277 |
| MS.gene42103.t1 | MTR_7g071710 | 95.763 | 118 | 5 | 0 | 86 | 203 | 1 | 118 | 1.15e-81 | 238 |
| MS.gene42103.t1 | MTR_4g029430 | 56.345 | 197 | 81 | 2 | 6 | 201 | 5 | 197 | 1.21e-79 | 236 |
| MS.gene42103.t1 | MTR_1g014180 | 51.613 | 186 | 80 | 5 | 16 | 196 | 5 | 185 | 1.11e-58 | 182 |
| MS.gene42103.t1 | MTR_1g014150 | 46.196 | 184 | 91 | 4 | 14 | 195 | 11 | 188 | 5.14e-47 | 153 |
| MS.gene42103.t1 | MTR_1g014160 | 39.894 | 188 | 88 | 6 | 26 | 195 | 59 | 239 | 4.99e-30 | 111 |
| MS.gene42103.t1 | MTR_2g103840 | 30.539 | 167 | 108 | 5 | 39 | 201 | 42 | 204 | 6.57e-23 | 92.0 |
| MS.gene42103.t1 | MTR_5g074550 | 30.556 | 180 | 110 | 6 | 26 | 195 | 17 | 191 | 4.22e-21 | 86.7 |
| MS.gene42103.t1 | MTR_4g010180 | 27.273 | 187 | 129 | 6 | 20 | 202 | 11 | 194 | 1.21e-20 | 85.9 |
| MS.gene42103.t1 | MTR_2g103850 | 29.167 | 168 | 111 | 5 | 39 | 202 | 43 | 206 | 1.52e-19 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42103.t1 | AT5G01750 | 57.000 | 200 | 85 | 1 | 4 | 202 | 15 | 214 | 6.78e-92 | 268 |
| MS.gene42103.t1 | AT3G11740 | 58.421 | 190 | 77 | 2 | 15 | 202 | 2 | 191 | 1.47e-82 | 243 |
| MS.gene42103.t1 | AT2G14560 | 51.295 | 193 | 92 | 2 | 9 | 200 | 1 | 192 | 2.62e-71 | 215 |
| MS.gene42103.t1 | AT2G14560 | 50.510 | 196 | 95 | 2 | 6 | 200 | 58 | 252 | 2.53e-70 | 215 |
| MS.gene42103.t1 | AT1G33840 | 46.445 | 211 | 101 | 2 | 1 | 199 | 1 | 211 | 6.83e-68 | 207 |
| MS.gene42103.t1 | AT5G01750 | 55.063 | 158 | 70 | 1 | 4 | 160 | 15 | 172 | 6.33e-67 | 203 |
| MS.gene42103.t1 | AT2G14560 | 48.171 | 164 | 83 | 2 | 9 | 171 | 1 | 163 | 2.60e-55 | 174 |
| MS.gene42103.t1 | AT2G14560 | 49.045 | 157 | 78 | 2 | 6 | 161 | 58 | 213 | 2.21e-54 | 173 |
| MS.gene42103.t1 | AT3G16900 | 43.243 | 185 | 85 | 4 | 16 | 199 | 15 | 180 | 6.46e-50 | 160 |
| MS.gene42103.t1 | AT1G33840 | 42.775 | 173 | 87 | 2 | 1 | 161 | 1 | 173 | 6.87e-50 | 160 |
| MS.gene42103.t1 | AT3G56180 | 35.052 | 194 | 119 | 4 | 12 | 201 | 14 | 204 | 1.40e-36 | 127 |
| MS.gene42103.t1 | AT3G56180 | 34.536 | 194 | 118 | 5 | 12 | 201 | 14 | 202 | 3.18e-34 | 120 |
| MS.gene42103.t1 | AT3G10986 | 32.632 | 190 | 121 | 4 | 15 | 197 | 3 | 192 | 6.85e-30 | 109 |
| MS.gene42103.t1 | AT3G15810 | 32.143 | 168 | 104 | 6 | 39 | 202 | 44 | 205 | 2.11e-24 | 95.9 |
| MS.gene42103.t1 | AT1G80120 | 32.738 | 168 | 106 | 4 | 39 | 202 | 30 | 194 | 1.38e-19 | 83.2 |
| MS.gene42103.t1 | AT2G38640 | 32.544 | 169 | 105 | 5 | 33 | 198 | 30 | 192 | 4.15e-17 | 76.3 |
| MS.gene42103.t1 | AT5G20640 | 28.729 | 181 | 112 | 5 | 36 | 201 | 33 | 211 | 1.87e-15 | 72.4 |
| MS.gene42103.t1 | AT2G30270 | 28.902 | 173 | 108 | 7 | 26 | 195 | 19 | 179 | 4.87e-15 | 70.5 |
| MS.gene42103.t1 | AT2G05910 | 28.402 | 169 | 100 | 7 | 39 | 198 | 28 | 184 | 7.06e-14 | 67.4 |
| MS.gene42103.t1 | AT5G41590 | 24.432 | 176 | 123 | 4 | 33 | 198 | 44 | 219 | 2.95e-11 | 60.8 |
Find 51 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCACAAACATCTTCTT+TGG | 0.257604 | 7.3:+32619857 | None:intergenic |
| GGATTTGGCGGTCGTGAAAA+AGG | 0.290385 | 7.3:-32620768 | MS.gene42103:CDS |
| TGCTCCCTATCCGGTGGATT+TGG | 0.306791 | 7.3:-32620783 | MS.gene42103:CDS |
| GCACCCACCACCACCATATT+CGG | 0.362096 | 7.3:-32620818 | MS.gene42103:CDS |
| ACAATATTGAGAGCCGAATA+TGG | 0.363340 | 7.3:+32620805 | None:intergenic |
| ATTGCCATTGACATCTTTAA+CGG | 0.374139 | 7.3:+32620721 | None:intergenic |
| TAGGGTGGTGATGGGGTTAC+CGG | 0.377318 | 7.3:+32620634 | None:intergenic |
| GTGGTGGTGGGTGCCGGCAT+CGG | 0.380802 | 7.3:+32620827 | None:intergenic |
| CCTCCGTGACCGCCGTGTCT+TGG | 0.425443 | 7.3:-32620666 | MS.gene42103:CDS |
| TCAATATTGTGCTCCCTATC+CGG | 0.428008 | 7.3:-32620792 | MS.gene42103:CDS |
| CTTGCGACGTAGGGTGGTGA+TGG | 0.430403 | 7.3:+32620625 | None:intergenic |
| GCCGGCATCGGTGGTTGATA+AGG | 0.437331 | 7.3:+32620839 | None:intergenic |
| AATATGGTGGTGGTGGGTGC+CGG | 0.438186 | 7.3:+32620821 | None:intergenic |
| GTGGTGGGTGCCGGCATCGG+TGG | 0.452113 | 7.3:+32620830 | None:intergenic |
| GATAAACAGTGACCGCAAAA+TGG | 0.467602 | 7.3:+32619601 | None:intergenic |
| TTCACGACCGCCAAATCCAC+CGG | 0.471320 | 7.3:+32620773 | None:intergenic |
| TTGCGACGTAGGGTGGTGAT+GGG | 0.485246 | 7.3:+32620626 | None:intergenic |
| ACCGCCAAATCCACCGGATA+GGG | 0.489401 | 7.3:+32620779 | None:intergenic |
| TCCTTATCAACCACCGATGC+CGG | 0.493777 | 7.3:-32620840 | MS.gene42103:CDS |
| CGTGTCTTGGTTGATGCCTC+CGG | 0.494853 | 7.3:-32620653 | MS.gene42103:CDS |
| ATGAAAGCGTAATCAACATT+GGG | 0.498374 | 7.3:+32619579 | None:intergenic |
| TAAAGTCAAAGGTAGTTGGT+TGG | 0.499063 | 7.3:-32619835 | MS.gene42103:CDS |
| TCCCTATCCGGTGGATTTGG+CGG | 0.505154 | 7.3:-32620780 | MS.gene42103:CDS |
| TATGAAAGCGTAATCAACAT+TGG | 0.519673 | 7.3:+32619578 | None:intergenic |
| CAACCAAGACACGGCGGTCA+CGG | 0.526860 | 7.3:+32620663 | None:intergenic |
| AACGGTGAAGTTGTCTGCCA+TGG | 0.529412 | 7.3:+32620739 | None:intergenic |
| TTGTACGTACCTTGCGACGT+AGG | 0.529527 | 7.3:+32620615 | None:intergenic |
| TACTAACAACATTGTTGCAC+AGG | 0.530405 | 7.3:-32619784 | MS.gene42103:intron |
| TGTTGATTACGCTTTCATAG+TGG | 0.534696 | 7.3:-32619574 | MS.gene42103:CDS |
| TGTACGTACCTTGCGACGTA+GGG | 0.547525 | 7.3:+32620616 | None:intergenic |
| AGAGCCGAATATGGTGGTGG+TGG | 0.571753 | 7.3:+32620814 | None:intergenic |
| AATGTCGTGTTTAAAGTGAA+AGG | 0.575214 | 7.3:-32620701 | MS.gene42103:CDS |
| CGATCTTGTATTATTTACGC+TGG | 0.576867 | 7.3:-32619810 | MS.gene42103:CDS |
| AGTGACTATGCATGATCGGT+GGG | 0.580863 | 7.3:-32619988 | MS.gene42103:CDS |
| GACCGCCAAATCCACCGGAT+AGG | 0.585193 | 7.3:+32620778 | None:intergenic |
| CATCACCACCCTACGTCGCA+AGG | 0.590882 | 7.3:-32620624 | MS.gene42103:intron |
| TTCACCGTTAAAGATGTCAA+TGG | 0.593126 | 7.3:-32620725 | MS.gene42103:CDS |
| CCAAGACACGGCGGTCACGG+AGG | 0.598529 | 7.3:+32620666 | None:intergenic |
| CAAGACACGGCGGTCACGGA+GGG | 0.598937 | 7.3:+32620667 | None:intergenic |
| TAGTGACTATGCATGATCGG+TGG | 0.614019 | 7.3:-32619989 | MS.gene42103:CDS |
| GGTGGTGATGGGGTTACCGG+AGG | 0.620164 | 7.3:+32620637 | None:intergenic |
| ATATTGTGCTCCCTATCCGG+TGG | 0.628631 | 7.3:-32620789 | MS.gene42103:CDS |
| AGATAGTGACTATGCATGAT+CGG | 0.644746 | 7.3:-32619992 | MS.gene42103:CDS |
| TGCGACGTAGGGTGGTGATG+GGG | 0.652061 | 7.3:+32620627 | None:intergenic |
| CGGAGGCATCAACCAAGACA+CGG | 0.654823 | 7.3:+32620654 | None:intergenic |
| TTGAGAGCCGAATATGGTGG+TGG | 0.662726 | 7.3:+32620811 | None:intergenic |
| ACGTACCTTGCGACGTAGGG+TGG | 0.669594 | 7.3:+32620619 | None:intergenic |
| GAGCCGAATATGGTGGTGGT+GGG | 0.669874 | 7.3:+32620815 | None:intergenic |
| GATCGGTGGGAAGCTTACAG+AGG | 0.712766 | 7.3:-32619975 | MS.gene42103:CDS |
| ATATTGAGAGCCGAATATGG+TGG | 0.741009 | 7.3:+32620808 | None:intergenic |
| AGGCATCAACCAAGACACGG+CGG | 0.796971 | 7.3:+32620657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTTTTTACTTTATTTTT+GGG | + | chr7.3:32620261-32620280 | None:intergenic | 10.0% |
| !!! | TATTTTTTAAAATAAAGAGT+AGG | - | chr7.3:32619873-32619892 | MS.gene42103:CDS | 10.0% |
| !!! | TTAAGTTTTTACTTTATTTT+TGG | + | chr7.3:32620262-32620281 | None:intergenic | 10.0% |
| !!! | TGTATATACAAAAGTATATT+AGG | - | chr7.3:32620633-32620652 | MS.gene42103:CDS | 15.0% |
| !!! | AAAAAAATAGTTTTGCTCAA+TGG | - | chr7.3:32620197-32620216 | MS.gene42103:intron | 20.0% |
| !!! | ATATTAGGTTTTACTTTGAT+TGG | - | chr7.3:32620648-32620667 | MS.gene42103:CDS | 20.0% |
| ! | AAAATCACAAACATCTTCTT+TGG | + | chr7.3:32620524-32620543 | None:intergenic | 25.0% |
| ! | ACACTTTATTGAGTTATATG+AGG | + | chr7.3:32620332-32620351 | None:intergenic | 25.0% |
| ! | AGTGTGTGAATTTCAATAAT+TGG | - | chr7.3:32620226-32620245 | MS.gene42103:intron | 25.0% |
| ! | TTGAGTTATATGAGGTATAA+TGG | + | chr7.3:32620324-32620343 | None:intergenic | 25.0% |
| ! | TTTGATTGGATTATCACTTA+AGG | - | chr7.3:32620662-32620681 | MS.gene42103:CDS | 25.0% |
| !! | AATTGATAAAGACCATTTTG+CGG | - | chr7.3:32620765-32620784 | MS.gene42103:CDS | 25.0% |
| !!! | ATTTTAAAGTCAAAGGTAGT+TGG | - | chr7.3:32620539-32620558 | MS.gene42103:intron | 25.0% |
| !!! | GTTTGTGATTTTAAAGTCAA+AGG | - | chr7.3:32620532-32620551 | MS.gene42103:intron | 25.0% |
| ATTGCCATTGACATCTTTAA+CGG | + | chr7.3:32619660-32619679 | None:intergenic | 30.0% | |
| ! | AATGTCGTGTTTAAAGTGAA+AGG | - | chr7.3:32619677-32619696 | MS.gene42103:intron | 30.0% |
| ! | ATGAAAGCGTAATCAACATT+GGG | + | chr7.3:32620802-32620821 | None:intergenic | 30.0% |
| ! | CAAACTAGATGTTTTTCTAG+CGG | - | chr7.3:32620492-32620511 | MS.gene42103:intron | 30.0% |
| ! | GATTCATCAAGTTGTACTAT+TGG | - | chr7.3:32620360-32620379 | MS.gene42103:intron | 30.0% |
| ! | TATGAAAGCGTAATCAACAT+TGG | + | chr7.3:32620803-32620822 | None:intergenic | 30.0% |
| !! | AAACTAGATGTTTTTCTAGC+GGG | - | chr7.3:32620493-32620512 | MS.gene42103:intron | 30.0% |
| ACAATATTGAGAGCCGAATA+TGG | + | chr7.3:32619576-32619595 | None:intergenic | 35.0% | |
| AGATAGTGACTATGCATGAT+CGG | - | chr7.3:32620386-32620405 | MS.gene42103:intron | 35.0% | |
| CGATCTTGTATTATTTACGC+TGG | - | chr7.3:32620568-32620587 | MS.gene42103:intron | 35.0% | |
| CGCTAGAAAAACATCTAGTT+TGG | + | chr7.3:32620494-32620513 | None:intergenic | 35.0% | |
| TAAAGTCAAAGGTAGTTGGT+TGG | - | chr7.3:32620543-32620562 | MS.gene42103:intron | 35.0% | |
| TACTAACAACATTGTTGCAC+AGG | - | chr7.3:32620594-32620613 | MS.gene42103:intron | 35.0% | |
| TTCACCGTTAAAGATGTCAA+TGG | - | chr7.3:32619653-32619672 | MS.gene42103:intron | 35.0% | |
| ! | TGTTGATTACGCTTTCATAG+TGG | - | chr7.3:32620804-32620823 | MS.gene42103:CDS | 35.0% |
| ATATTGAGAGCCGAATATGG+TGG | + | chr7.3:32619573-32619592 | None:intergenic | 40.0% | |
| CGTGAAAAAGGTAATGACCA+TGG | - | chr7.3:32619622-32619641 | MS.gene42103:CDS | 40.0% | |
| GATAAACAGTGACCGCAAAA+TGG | + | chr7.3:32620780-32620799 | None:intergenic | 40.0% | |
| TCAATATTGTGCTCCCTATC+CGG | - | chr7.3:32619586-32619605 | MS.gene42103:CDS | 40.0% | |
| AAGAGTAGGACATCCAAGTG+TGG | - | chr7.3:32619887-32619906 | MS.gene42103:CDS | 45.0% | |
| AGTGACTATGCATGATCGGT+GGG | - | chr7.3:32620390-32620409 | MS.gene42103:intron | 45.0% | |
| TAGTGACTATGCATGATCGG+TGG | - | chr7.3:32620389-32620408 | MS.gene42103:intron | 45.0% | |
| AACGGTGAAGTTGTCTGCCA+TGG | + | chr7.3:32619642-32619661 | None:intergenic | 50.0% | |
| ATATTGTGCTCCCTATCCGG+TGG | - | chr7.3:32619589-32619608 | MS.gene42103:CDS | 50.0% | |
| GGATTTGGCGGTCGTGAAAA+AGG | - | chr7.3:32619610-32619629 | MS.gene42103:CDS | 50.0% | |
| TCCTTATCAACCACCGATGC+CGG | - | chr7.3:32619538-32619557 | MS.gene42103:CDS | 50.0% | |
| TGTACGTACCTTGCGACGTA+GGG | + | chr7.3:32619765-32619784 | None:intergenic | 50.0% | |
| TTGAGAGCCGAATATGGTGG+TGG | + | chr7.3:32619570-32619589 | None:intergenic | 50.0% | |
| TTGTACGTACCTTGCGACGT+AGG | + | chr7.3:32619766-32619785 | None:intergenic | 50.0% | |
| ACCGCCAAATCCACCGGATA+GGG | + | chr7.3:32619602-32619621 | None:intergenic | 55.0% | |
| AGGCATCAACCAAGACACGG+CGG | + | chr7.3:32619724-32619743 | None:intergenic | 55.0% | |
| CAACCACGTGAGTCCACACT+TGG | + | chr7.3:32619903-32619922 | None:intergenic | 55.0% | |
| CATCCAAGTGTGGACTCACG+TGG | - | chr7.3:32619897-32619916 | MS.gene42103:CDS | 55.0% | |
| GATCGGTGGGAAGCTTACAG+AGG | - | chr7.3:32620403-32620422 | MS.gene42103:intron | 55.0% | |
| GCACCCACCACCACCATATT+CGG | - | chr7.3:32619560-32619579 | MS.gene42103:CDS | 55.0% | |
| TTCACGACCGCCAAATCCAC+CGG | + | chr7.3:32619608-32619627 | None:intergenic | 55.0% | |
| TTGCGACGTAGGGTGGTGAT+GGG | + | chr7.3:32619755-32619774 | None:intergenic | 55.0% | |
| ! | CGTGTCTTGGTTGATGCCTC+CGG | - | chr7.3:32619725-32619744 | MS.gene42103:intron | 55.0% |
| ! | TCCCTATCCGGTGGATTTGG+CGG | - | chr7.3:32619598-32619617 | MS.gene42103:CDS | 55.0% |
| ! | TGCTCCCTATCCGGTGGATT+TGG | - | chr7.3:32619595-32619614 | MS.gene42103:CDS | 55.0% |
| !! | AATATGGTGGTGGTGGGTGC+CGG | + | chr7.3:32619560-32619579 | None:intergenic | 55.0% |
| !! | AGAGCCGAATATGGTGGTGG+TGG | + | chr7.3:32619567-32619586 | None:intergenic | 55.0% |
| !! | CGGAGGCATCAACCAAGACA+CGG | + | chr7.3:32619727-32619746 | None:intergenic | 55.0% |
| !! | GAGCCGAATATGGTGGTGGT+GGG | + | chr7.3:32619566-32619585 | None:intergenic | 55.0% |
| !! | TAGGGTGGTGATGGGGTTAC+CGG | + | chr7.3:32619747-32619766 | None:intergenic | 55.0% |
| ACGTACCTTGCGACGTAGGG+TGG | + | chr7.3:32619762-32619781 | None:intergenic | 60.0% | |
| CAACCAAGACACGGCGGTCA+CGG | + | chr7.3:32619718-32619737 | None:intergenic | 60.0% | |
| CATCACCACCCTACGTCGCA+AGG | - | chr7.3:32619754-32619773 | MS.gene42103:intron | 60.0% | |
| CTTGCGACGTAGGGTGGTGA+TGG | + | chr7.3:32619756-32619775 | None:intergenic | 60.0% | |
| GACCGCCAAATCCACCGGAT+AGG | + | chr7.3:32619603-32619622 | None:intergenic | 60.0% | |
| ! | TGCGACGTAGGGTGGTGATG+GGG | + | chr7.3:32619754-32619773 | None:intergenic | 60.0% |
| !! | GCCGGCATCGGTGGTTGATA+AGG | + | chr7.3:32619542-32619561 | None:intergenic | 60.0% |
| CAAGACACGGCGGTCACGGA+GGG | + | chr7.3:32619714-32619733 | None:intergenic | 65.0% | |
| !! | GGTGGTGATGGGGTTACCGG+AGG | + | chr7.3:32619744-32619763 | None:intergenic | 65.0% |
| CCAAGACACGGCGGTCACGG+AGG | + | chr7.3:32619715-32619734 | None:intergenic | 70.0% | |
| CCTCCGTGACCGCCGTGTCT+TGG | - | chr7.3:32619712-32619731 | MS.gene42103:intron | 70.0% | |
| !! | GTGGTGGTGGGTGCCGGCAT+CGG | + | chr7.3:32619554-32619573 | None:intergenic | 70.0% |
| !! | GTGGTGGGTGCCGGCATCGG+TGG | + | chr7.3:32619551-32619570 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 32619530 | 32620870 | 32619530 | ID=MS.gene42103 |
| chr7.3 | mRNA | 32619530 | 32620870 | 32619530 | ID=MS.gene42103.t1;Parent=MS.gene42103 |
| chr7.3 | exon | 32620625 | 32620870 | 32620625 | ID=MS.gene42103.t1.exon1;Parent=MS.gene42103.t1 |
| chr7.3 | CDS | 32620625 | 32620870 | 32620625 | ID=cds.MS.gene42103.t1;Parent=MS.gene42103.t1 |
| chr7.3 | exon | 32619785 | 32620012 | 32619785 | ID=MS.gene42103.t1.exon2;Parent=MS.gene42103.t1 |
| chr7.3 | CDS | 32619785 | 32620012 | 32619785 | ID=cds.MS.gene42103.t1;Parent=MS.gene42103.t1 |
| chr7.3 | exon | 32619530 | 32619667 | 32619530 | ID=MS.gene42103.t1.exon3;Parent=MS.gene42103.t1 |
| chr7.3 | CDS | 32619530 | 32619667 | 32619530 | ID=cds.MS.gene42103.t1;Parent=MS.gene42103.t1 |
| Gene Sequence |
| Protein sequence |
