Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87038.t1 | XP_004492957.1 | 65.9 | 211 | 63 | 2 | 1 | 202 | 1 | 211 | 8.90E-69 | 270 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87038.t1 | Q9LZX1 | 48.0 | 200 | 103 | 1 | 4 | 202 | 15 | 214 | 3.2e-51 | 203.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87038.t1 | A0A1S2XRT7 | 65.9 | 211 | 63 | 2 | 1 | 202 | 1 | 211 | 6.4e-69 | 270.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87038 | MS.gene87046 | PPI |
| MS.gene91237 | MS.gene87038 | PPI |
| MS.gene42100 | MS.gene87038 | PPI |
| MS.gene87041 | MS.gene87038 | PPI |
| MS.gene99705 | MS.gene87038 | PPI |
| MS.gene87038 | MS.gene91238 | PPI |
| MS.gene87038 | MS.gene25045 | PPI |
| MS.gene42096 | MS.gene87038 | PPI |
| MS.gene87768 | MS.gene87038 | PPI |
| MS.gene87038 | MS.gene87768 | PPI |
| MS.gene87038 | MS.gene81036 | PPI |
| MS.gene42097 | MS.gene87038 | PPI |
| MS.gene009719 | MS.gene87038 | PPI |
| MS.gene009718 | MS.gene87038 | PPI |
| MS.gene87769 | MS.gene87038 | PPI |
| MS.gene87038 | MS.gene87762 | PPI |
| MS.gene99704 | MS.gene87038 | PPI |
| MS.gene26305 | MS.gene87038 | PPI |
| MS.gene87038 | MS.gene42096 | PPI |
| MS.gene42848 | MS.gene87038 | PPI |
| MS.gene42103 | MS.gene87038 | PPI |
| MS.gene42098 | MS.gene87038 | PPI |
| MS.gene87043 | MS.gene87038 | PPI |
| MS.gene87040 | MS.gene87038 | PPI |
| MS.gene87765 | MS.gene87038 | PPI |
| MS.gene051028 | MS.gene87038 | PPI |
| MS.gene87767 | MS.gene87038 | PPI |
| MS.gene87039 | MS.gene87038 | PPI |
| MS.gene42099 | MS.gene87038 | PPI |
| MS.gene42091 | MS.gene87038 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87038.t1 | MTR_7g072120 | 81.905 | 210 | 30 | 4 | 1 | 202 | 1 | 210 | 1.51e-126 | 355 |
| MS.gene87038.t1 | MTR_7g072170 | 79.524 | 210 | 35 | 2 | 1 | 202 | 1 | 210 | 2.91e-123 | 348 |
| MS.gene87038.t1 | MTR_7g072270 | 78.744 | 207 | 38 | 1 | 1 | 201 | 1 | 207 | 5.09e-123 | 347 |
| MS.gene87038.t1 | MTR_7g072140 | 78.095 | 210 | 38 | 2 | 1 | 202 | 1 | 210 | 1.60e-121 | 343 |
| MS.gene87038.t1 | MTR_7g072250 | 66.820 | 217 | 51 | 3 | 1 | 200 | 25 | 237 | 3.12e-99 | 287 |
| MS.gene87038.t1 | MTR_7g072270 | 77.576 | 165 | 31 | 1 | 1 | 159 | 1 | 165 | 4.99e-95 | 274 |
| MS.gene87038.t1 | MTR_7g071710 | 95.763 | 118 | 5 | 0 | 86 | 203 | 1 | 118 | 4.41e-81 | 237 |
| MS.gene87038.t1 | MTR_4g029430 | 56.345 | 197 | 81 | 2 | 6 | 201 | 5 | 197 | 5.85e-79 | 234 |
| MS.gene87038.t1 | MTR_1g014180 | 51.613 | 186 | 80 | 5 | 16 | 196 | 5 | 185 | 4.99e-58 | 181 |
| MS.gene87038.t1 | MTR_1g014150 | 46.196 | 184 | 91 | 4 | 14 | 195 | 11 | 188 | 2.13e-46 | 151 |
| MS.gene87038.t1 | MTR_1g014160 | 40.426 | 188 | 87 | 6 | 26 | 195 | 59 | 239 | 2.42e-30 | 112 |
| MS.gene87038.t1 | MTR_2g103840 | 31.138 | 167 | 107 | 5 | 39 | 201 | 42 | 204 | 2.35e-22 | 90.9 |
| MS.gene87038.t1 | MTR_5g074550 | 30.556 | 180 | 110 | 6 | 26 | 195 | 17 | 191 | 1.79e-20 | 85.1 |
| MS.gene87038.t1 | MTR_4g010180 | 26.738 | 187 | 130 | 6 | 20 | 202 | 11 | 194 | 8.15e-20 | 83.6 |
| MS.gene87038.t1 | MTR_2g103850 | 29.762 | 168 | 110 | 5 | 39 | 202 | 43 | 206 | 5.16e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87038.t1 | AT5G01750 | 57.000 | 200 | 85 | 1 | 4 | 202 | 15 | 214 | 3.74e-91 | 266 |
| MS.gene87038.t1 | AT3G11740 | 58.421 | 190 | 77 | 2 | 15 | 202 | 2 | 191 | 5.28e-82 | 242 |
| MS.gene87038.t1 | AT2G14560 | 52.151 | 186 | 88 | 1 | 16 | 200 | 7 | 192 | 1.19e-70 | 214 |
| MS.gene87038.t1 | AT2G14560 | 50.510 | 196 | 95 | 2 | 6 | 200 | 58 | 252 | 1.16e-69 | 213 |
| MS.gene87038.t1 | AT1G33840 | 46.445 | 211 | 101 | 2 | 1 | 199 | 1 | 211 | 4.22e-67 | 205 |
| MS.gene87038.t1 | AT5G01750 | 55.063 | 158 | 70 | 1 | 4 | 160 | 15 | 172 | 2.17e-66 | 202 |
| MS.gene87038.t1 | AT2G14560 | 48.171 | 164 | 83 | 2 | 9 | 171 | 1 | 163 | 1.03e-54 | 172 |
| MS.gene87038.t1 | AT2G14560 | 49.045 | 157 | 78 | 2 | 6 | 161 | 58 | 213 | 1.14e-53 | 172 |
| MS.gene87038.t1 | AT1G33840 | 42.775 | 173 | 87 | 2 | 1 | 161 | 1 | 173 | 5.03e-49 | 158 |
| MS.gene87038.t1 | AT3G16900 | 42.162 | 185 | 87 | 4 | 16 | 199 | 15 | 180 | 7.07e-49 | 157 |
| MS.gene87038.t1 | AT3G56180 | 35.567 | 194 | 118 | 4 | 12 | 201 | 14 | 204 | 3.64e-36 | 126 |
| MS.gene87038.t1 | AT3G56180 | 35.052 | 194 | 117 | 5 | 12 | 201 | 14 | 202 | 7.28e-34 | 120 |
| MS.gene87038.t1 | AT3G10986 | 32.632 | 190 | 121 | 4 | 15 | 197 | 3 | 192 | 3.10e-29 | 107 |
| MS.gene87038.t1 | AT3G15810 | 30.952 | 168 | 106 | 6 | 39 | 202 | 44 | 205 | 1.57e-23 | 93.6 |
| MS.gene87038.t1 | AT1G80120 | 33.333 | 168 | 105 | 4 | 39 | 202 | 30 | 194 | 1.90e-19 | 82.8 |
| MS.gene87038.t1 | AT2G38640 | 31.953 | 169 | 106 | 5 | 33 | 198 | 30 | 192 | 4.06e-17 | 76.3 |
| MS.gene87038.t1 | AT5G20640 | 28.177 | 181 | 113 | 5 | 36 | 201 | 33 | 211 | 4.62e-15 | 71.2 |
| MS.gene87038.t1 | AT2G05910 | 29.586 | 169 | 98 | 8 | 39 | 198 | 28 | 184 | 1.19e-13 | 67.0 |
| MS.gene87038.t1 | AT5G41590 | 25.000 | 176 | 122 | 4 | 33 | 198 | 44 | 219 | 1.39e-11 | 61.6 |
Find 51 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCACAAACATCTTCTT+TGG | 0.257604 | 7.4:+32420109 | None:intergenic |
| GGATTTAGCGGTCGTGAAAA+AGG | 0.322249 | 7.4:-32421024 | MS.gene87038:CDS |
| GCACCCACCACCACCATATT+CGG | 0.351246 | 7.4:-32421074 | MS.gene87038:CDS |
| ACAATATTGAGAGCCGAATA+TGG | 0.363340 | 7.4:+32421061 | None:intergenic |
| TAGGGTGGTGATGGGGTTAC+CGG | 0.377318 | 7.4:+32420890 | None:intergenic |
| GTTGCCATTGACATCTTTAA+CGG | 0.392620 | 7.4:+32420977 | None:intergenic |
| AATATGGTGGTGGTGGGTGC+TGG | 0.394560 | 7.4:+32421077 | None:intergenic |
| ACCGCTAAATCCACCGGATA+AGG | 0.395830 | 7.4:+32421035 | None:intergenic |
| AGCTAGAAACACATCTAGTT+TGG | 0.401309 | 7.4:+32420139 | None:intergenic |
| TCAATATTGTGCTCCTTATC+CGG | 0.417584 | 7.4:-32421048 | MS.gene87038:CDS |
| CCTCCGTGACCGCCGTGTCT+TGG | 0.425443 | 7.4:-32420922 | MS.gene87038:CDS |
| GTGGTGGTGGGTGCTGGCAT+CGG | 0.428409 | 7.4:+32421083 | None:intergenic |
| CTTGCGACGTAGGGTGGTGA+TGG | 0.443247 | 7.4:+32420881 | None:intergenic |
| GCTGGCATCGGTGGTTGATA+AGG | 0.448493 | 7.4:+32421095 | None:intergenic |
| TCCTTATCCGGTGGATTTAG+CGG | 0.450209 | 7.4:-32421036 | MS.gene87038:CDS |
| TTGCGACGTAGGGTGGTGAT+GGG | 0.485246 | 7.4:+32420882 | None:intergenic |
| CGTGTCTTGGTTGATGCCTC+CGG | 0.494853 | 7.4:-32420909 | MS.gene87038:CDS |
| GTGGTGGGTGCTGGCATCGG+TGG | 0.497728 | 7.4:+32421086 | None:intergenic |
| ATGAAAGCGTAATCAACATT+GGG | 0.498374 | 7.4:+32419831 | None:intergenic |
| TAAAGTCAAAGGTAGTTGGT+TGG | 0.499063 | 7.4:-32420087 | MS.gene87038:CDS |
| AACAATGTTGTTAGTATCAC+CGG | 0.501905 | 7.4:+32420043 | None:intergenic |
| TATGAAAGCGTAATCAACAT+TGG | 0.519673 | 7.4:+32419830 | None:intergenic |
| AAACTAGATGTGTTTCTAGC+TGG | 0.525823 | 7.4:-32420137 | MS.gene87038:CDS |
| CAACCAAGACACGGCGGTCA+CGG | 0.526860 | 7.4:+32420919 | None:intergenic |
| GATAGACAGTGACTGCGAAA+TGG | 0.528270 | 7.4:+32419853 | None:intergenic |
| AACGGTGAAGTTGTCTGCCA+TGG | 0.529412 | 7.4:+32420995 | None:intergenic |
| TACTAACAACATTGTTGCAC+AGG | 0.530405 | 7.4:-32420036 | MS.gene87038:intron |
| TGTTGATTACGCTTTCATAG+TGG | 0.534696 | 7.4:-32419826 | MS.gene87038:CDS |
| TTCACGACCGCTAAATCCAC+CGG | 0.537903 | 7.4:+32421029 | None:intergenic |
| CGATCTTGTATTGTTCATGC+CGG | 0.561038 | 7.4:-32420062 | MS.gene87038:CDS |
| AACGTCGTGTTTAAAGTGAA+AGG | 0.567690 | 7.4:-32420957 | MS.gene87038:CDS |
| AGAGCCGAATATGGTGGTGG+TGG | 0.571753 | 7.4:+32421070 | None:intergenic |
| TGTACATACCTTGCGACGTA+GGG | 0.572581 | 7.4:+32420872 | None:intergenic |
| AGTGACTATGCATGATCGGT+GGG | 0.580863 | 7.4:-32420240 | MS.gene87038:CDS |
| ATATTGTGCTCCTTATCCGG+TGG | 0.590508 | 7.4:-32421045 | MS.gene87038:CDS |
| CATCACCACCCTACGTCGCA+AGG | 0.590882 | 7.4:-32420880 | MS.gene87038:intron |
| TTCACCGTTAAAGATGTCAA+TGG | 0.593126 | 7.4:-32420981 | MS.gene87038:CDS |
| CCAAGACACGGCGGTCACGG+AGG | 0.598529 | 7.4:+32420922 | None:intergenic |
| CAAGACACGGCGGTCACGGA+GGG | 0.598937 | 7.4:+32420923 | None:intergenic |
| TAGTGACTATGCATGATCGG+TGG | 0.614019 | 7.4:-32420241 | MS.gene87038:CDS |
| GGTGGTGATGGGGTTACCGG+AGG | 0.620164 | 7.4:+32420893 | None:intergenic |
| ACATACCTTGCGACGTAGGG+TGG | 0.638701 | 7.4:+32420875 | None:intergenic |
| TTGTACATACCTTGCGACGT+AGG | 0.644546 | 7.4:+32420871 | None:intergenic |
| AGATAGTGACTATGCATGAT+CGG | 0.644746 | 7.4:-32420244 | MS.gene87038:CDS |
| TGCGACGTAGGGTGGTGATG+GGG | 0.652061 | 7.4:+32420883 | None:intergenic |
| CGGAGGCATCAACCAAGACA+CGG | 0.654823 | 7.4:+32420910 | None:intergenic |
| TTGAGAGCCGAATATGGTGG+TGG | 0.662726 | 7.4:+32421067 | None:intergenic |
| GAGCCGAATATGGTGGTGGT+GGG | 0.669874 | 7.4:+32421071 | None:intergenic |
| GATCGGTGGGAAGCTTACAG+AGG | 0.712766 | 7.4:-32420227 | MS.gene87038:CDS |
| ATATTGAGAGCCGAATATGG+TGG | 0.741009 | 7.4:+32421064 | None:intergenic |
| AGGCATCAACCAAGACACGG+CGG | 0.796971 | 7.4:+32420913 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATCAACTAAAAAAAATA+TGG | - | chr7.4:32420435-32420454 | MS.gene87038:intron | 10.0% |
| !!! | TTATTTTTTAAATAAAGAGT+AGG | - | chr7.4:32420126-32420145 | MS.gene87038:CDS | 10.0% |
| !! | AGTATGTGAATTTCAATAAT+TGG | - | chr7.4:32420477-32420496 | MS.gene87038:intron | 20.0% |
| !! | TTGAGATATATGAAGTATAA+TGG | + | chr7.4:32420580-32420599 | None:intergenic | 20.0% |
| !!! | ATATAAGGTTTTACTTTGAT+TGG | - | chr7.4:32420904-32420923 | MS.gene87038:CDS | 20.0% |
| !!! | TGCTCAATATTTTAATTTTG+TGG | - | chr7.4:32420076-32420095 | MS.gene87038:CDS | 20.0% |
| !!! | TGTAAATTCAAGAGTATATA+AGG | - | chr7.4:32420889-32420908 | MS.gene87038:CDS | 20.0% |
| ! | AAAATCACAAACATCTTCTT+TGG | + | chr7.4:32420780-32420799 | None:intergenic | 25.0% |
| ! | TTTGATTGGATTATCACTTA+AGG | - | chr7.4:32420918-32420937 | MS.gene87038:CDS | 25.0% |
| !! | GATTCATTAAGTTGTACTAT+TGG | - | chr7.4:32420616-32420635 | MS.gene87038:intron | 25.0% |
| !!! | AAAAATATGGTTTTGCTCAA+TGG | - | chr7.4:32420448-32420467 | MS.gene87038:intron | 25.0% |
| !!! | ATAACTTTTTTTTTTCGTGC+AGG | + | chr7.4:32420413-32420432 | None:intergenic | 25.0% |
| !!! | ATTTTAAAGTCAAAGGTAGT+TGG | - | chr7.4:32420795-32420814 | MS.gene87038:intron | 25.0% |
| !!! | GTTTGTGATTTTAAAGTCAA+AGG | - | chr7.4:32420788-32420807 | MS.gene87038:intron | 25.0% |
| AACAATGTTGTTAGTATCAC+CGG | + | chr7.4:32420846-32420865 | None:intergenic | 30.0% | |
| ! | ATGAAAGCGTAATCAACATT+GGG | + | chr7.4:32421058-32421077 | None:intergenic | 30.0% |
| ! | TATGAAAGCGTAATCAACAT+TGG | + | chr7.4:32421059-32421078 | None:intergenic | 30.0% |
| ACAATATTGAGAGCCGAATA+TGG | + | chr7.4:32419828-32419847 | None:intergenic | 35.0% | |
| AGATAGTGACTATGCATGAT+CGG | - | chr7.4:32420642-32420661 | MS.gene87038:intron | 35.0% | |
| AGCTAGAAACACATCTAGTT+TGG | + | chr7.4:32420750-32420769 | None:intergenic | 35.0% | |
| GTTGCCATTGACATCTTTAA+CGG | + | chr7.4:32419912-32419931 | None:intergenic | 35.0% | |
| TAAAGTCAAAGGTAGTTGGT+TGG | - | chr7.4:32420799-32420818 | MS.gene87038:intron | 35.0% | |
| TACTAACAACATTGTTGCAC+AGG | - | chr7.4:32420850-32420869 | MS.gene87038:intron | 35.0% | |
| TCAATATTGTGCTCCTTATC+CGG | - | chr7.4:32419838-32419857 | MS.gene87038:CDS | 35.0% | |
| TTCACCGTTAAAGATGTCAA+TGG | - | chr7.4:32419905-32419924 | MS.gene87038:intron | 35.0% | |
| ! | AACGTCGTGTTTAAAGTGAA+AGG | - | chr7.4:32419929-32419948 | MS.gene87038:intron | 35.0% |
| ! | TGTTGATTACGCTTTCATAG+TGG | - | chr7.4:32421060-32421079 | MS.gene87038:CDS | 35.0% |
| !! | AAACTAGATGTGTTTCTAGC+TGG | - | chr7.4:32420749-32420768 | MS.gene87038:intron | 35.0% |
| ATATTGAGAGCCGAATATGG+TGG | + | chr7.4:32419825-32419844 | None:intergenic | 40.0% | |
| CGATCTTGTATTGTTCATGC+CGG | - | chr7.4:32420824-32420843 | MS.gene87038:intron | 40.0% | |
| CGTGAAAAAGGTAATGACCA+TGG | - | chr7.4:32419874-32419893 | MS.gene87038:CDS | 40.0% | |
| AGTGACTATGCATGATCGGT+GGG | - | chr7.4:32420646-32420665 | MS.gene87038:intron | 45.0% | |
| ATATTGTGCTCCTTATCCGG+TGG | - | chr7.4:32419841-32419860 | MS.gene87038:CDS | 45.0% | |
| GATAGACAGTGACTGCGAAA+TGG | + | chr7.4:32421036-32421055 | None:intergenic | 45.0% | |
| GGATTTAGCGGTCGTGAAAA+AGG | - | chr7.4:32419862-32419881 | MS.gene87038:CDS | 45.0% | |
| TAGTGACTATGCATGATCGG+TGG | - | chr7.4:32420645-32420664 | MS.gene87038:intron | 45.0% | |
| TGTACATACCTTGCGACGTA+GGG | + | chr7.4:32420017-32420036 | None:intergenic | 45.0% | |
| TTGTACATACCTTGCGACGT+AGG | + | chr7.4:32420018-32420037 | None:intergenic | 45.0% | |
| ! | TCCTTATCCGGTGGATTTAG+CGG | - | chr7.4:32419850-32419869 | MS.gene87038:CDS | 45.0% |
| !!! | TTTTTACTTTTTTTTTTTTT+TGG | + | chr7.4:32420514-32420533 | None:intergenic | 5.0% |
| AACGGTGAAGTTGTCTGCCA+TGG | + | chr7.4:32419894-32419913 | None:intergenic | 50.0% | |
| ACCGCTAAATCCACCGGATA+AGG | + | chr7.4:32419854-32419873 | None:intergenic | 50.0% | |
| CAACCACGTGAGTCTACTCT+CGG | + | chr7.4:32420156-32420175 | None:intergenic | 50.0% | |
| TTCACGACCGCTAAATCCAC+CGG | + | chr7.4:32419860-32419879 | None:intergenic | 50.0% | |
| TTGAGAGCCGAATATGGTGG+TGG | + | chr7.4:32419822-32419841 | None:intergenic | 50.0% | |
| ACATACCTTGCGACGTAGGG+TGG | + | chr7.4:32420014-32420033 | None:intergenic | 55.0% | |
| AGGCATCAACCAAGACACGG+CGG | + | chr7.4:32419976-32419995 | None:intergenic | 55.0% | |
| CATCCGAGAGTAGACTCACG+TGG | - | chr7.4:32420150-32420169 | MS.gene87038:CDS | 55.0% | |
| GATCGGTGGGAAGCTTACAG+AGG | - | chr7.4:32420659-32420678 | MS.gene87038:intron | 55.0% | |
| GCACCCACCACCACCATATT+CGG | - | chr7.4:32419812-32419831 | MS.gene87038:CDS | 55.0% | |
| TTGCGACGTAGGGTGGTGAT+GGG | + | chr7.4:32420007-32420026 | None:intergenic | 55.0% | |
| ! | CGTGTCTTGGTTGATGCCTC+CGG | - | chr7.4:32419977-32419996 | MS.gene87038:intron | 55.0% |
| !! | AATATGGTGGTGGTGGGTGC+TGG | + | chr7.4:32419812-32419831 | None:intergenic | 55.0% |
| !! | AGAGCCGAATATGGTGGTGG+TGG | + | chr7.4:32419819-32419838 | None:intergenic | 55.0% |
| !! | CGGAGGCATCAACCAAGACA+CGG | + | chr7.4:32419979-32419998 | None:intergenic | 55.0% |
| !! | GAGCCGAATATGGTGGTGGT+GGG | + | chr7.4:32419818-32419837 | None:intergenic | 55.0% |
| !! | GCTGGCATCGGTGGTTGATA+AGG | + | chr7.4:32419794-32419813 | None:intergenic | 55.0% |
| !! | TAGGGTGGTGATGGGGTTAC+CGG | + | chr7.4:32419999-32420018 | None:intergenic | 55.0% |
| CAACCAAGACACGGCGGTCA+CGG | + | chr7.4:32419970-32419989 | None:intergenic | 60.0% | |
| CATCACCACCCTACGTCGCA+AGG | - | chr7.4:32420006-32420025 | MS.gene87038:intron | 60.0% | |
| CTTGCGACGTAGGGTGGTGA+TGG | + | chr7.4:32420008-32420027 | None:intergenic | 60.0% | |
| ! | TGCGACGTAGGGTGGTGATG+GGG | + | chr7.4:32420006-32420025 | None:intergenic | 60.0% |
| CAAGACACGGCGGTCACGGA+GGG | + | chr7.4:32419966-32419985 | None:intergenic | 65.0% | |
| !! | GGTGGTGATGGGGTTACCGG+AGG | + | chr7.4:32419996-32420015 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGGTGCTGGCAT+CGG | + | chr7.4:32419806-32419825 | None:intergenic | 65.0% |
| CCAAGACACGGCGGTCACGG+AGG | + | chr7.4:32419967-32419986 | None:intergenic | 70.0% | |
| CCTCCGTGACCGCCGTGTCT+TGG | - | chr7.4:32419964-32419983 | MS.gene87038:intron | 70.0% | |
| !! | GTGGTGGGTGCTGGCATCGG+TGG | + | chr7.4:32419803-32419822 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 32419782 | 32421126 | 32419782 | ID=MS.gene87038 |
| chr7.4 | mRNA | 32419782 | 32421126 | 32419782 | ID=MS.gene87038.t1;Parent=MS.gene87038 |
| chr7.4 | exon | 32420881 | 32421126 | 32420881 | ID=MS.gene87038.t1.exon1;Parent=MS.gene87038.t1 |
| chr7.4 | CDS | 32420881 | 32421126 | 32420881 | ID=cds.MS.gene87038.t1;Parent=MS.gene87038.t1 |
| chr7.4 | exon | 32420037 | 32420264 | 32420037 | ID=MS.gene87038.t1.exon2;Parent=MS.gene87038.t1 |
| chr7.4 | CDS | 32420037 | 32420264 | 32420037 | ID=cds.MS.gene87038.t1;Parent=MS.gene87038.t1 |
| chr7.4 | exon | 32419782 | 32419919 | 32419782 | ID=MS.gene87038.t1.exon3;Parent=MS.gene87038.t1 |
| chr7.4 | CDS | 32419782 | 32419919 | 32419782 | ID=cds.MS.gene87038.t1;Parent=MS.gene87038.t1 |
| Gene Sequence |
| Protein sequence |
