Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42099.t1 | XP_003623535.1 | 84.9 | 212 | 31 | 1 | 1 | 211 | 1 | 212 | 4.60E-92 | 347.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42099.t1 | Q9LZX1 | 56.0 | 209 | 91 | 1 | 2 | 210 | 8 | 215 | 2.0e-64 | 246.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42099.t1 | G7KW17 | 84.9 | 212 | 31 | 1 | 1 | 211 | 1 | 212 | 3.3e-92 | 347.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26305 | MS.gene42099 | PPI |
| MS.gene009719 | MS.gene42099 | PPI |
| MS.gene42103 | MS.gene42099 | PPI |
| MS.gene42098 | MS.gene42099 | PPI |
| MS.gene87043 | MS.gene42099 | PPI |
| MS.gene99704 | MS.gene42099 | PPI |
| MS.gene051028 | MS.gene42099 | PPI |
| MS.gene87767 | MS.gene42099 | PPI |
| MS.gene87039 | MS.gene42099 | PPI |
| MS.gene42848 | MS.gene42099 | PPI |
| MS.gene42099 | MS.gene91238 | PPI |
| MS.gene42091 | MS.gene42099 | PPI |
| MS.gene42100 | MS.gene42099 | PPI |
| MS.gene42099 | MS.gene87040 | PPI |
| MS.gene42099 | MS.gene25045 | PPI |
| MS.gene42099 | MS.gene87046 | PPI |
| MS.gene87040 | MS.gene42099 | PPI |
| MS.gene87765 | MS.gene42099 | PPI |
| MS.gene99705 | MS.gene42099 | PPI |
| MS.gene42099 | MS.gene87768 | PPI |
| MS.gene42099 | MS.gene81036 | PPI |
| MS.gene42099 | MS.gene009718 | PPI |
| MS.gene91237 | MS.gene42099 | PPI |
| MS.gene87041 | MS.gene42099 | PPI |
| MS.gene42099 | MS.gene42100 | PPI |
| MS.gene42099 | MS.gene42097 | PPI |
| MS.gene42099 | MS.gene87762 | PPI |
| MS.gene42099 | MS.gene42096 | PPI |
| MS.gene87769 | MS.gene42099 | PPI |
| MS.gene42099 | MS.gene87038 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42099.t1 | MTR_7g072120 | 94.340 | 212 | 11 | 1 | 1 | 211 | 1 | 212 | 2.19e-148 | 411 |
| MS.gene42099.t1 | MTR_7g072170 | 86.256 | 211 | 28 | 1 | 1 | 210 | 1 | 211 | 7.94e-136 | 380 |
| MS.gene42099.t1 | MTR_7g072140 | 84.434 | 212 | 32 | 1 | 1 | 211 | 1 | 212 | 1.84e-132 | 371 |
| MS.gene42099.t1 | MTR_7g072270 | 81.043 | 211 | 39 | 1 | 1 | 211 | 1 | 210 | 1.10e-129 | 363 |
| MS.gene42099.t1 | MTR_7g072250 | 70.588 | 221 | 49 | 4 | 1 | 210 | 25 | 240 | 5.90e-106 | 305 |
| MS.gene42099.t1 | MTR_7g072270 | 80.723 | 166 | 31 | 1 | 1 | 166 | 1 | 165 | 1.03e-100 | 288 |
| MS.gene42099.t1 | MTR_4g029430 | 61.458 | 192 | 68 | 3 | 19 | 209 | 12 | 198 | 5.66e-83 | 245 |
| MS.gene42099.t1 | MTR_7g071710 | 83.761 | 117 | 19 | 0 | 93 | 209 | 1 | 117 | 1.20e-72 | 216 |
| MS.gene42099.t1 | MTR_1g014180 | 54.497 | 189 | 75 | 6 | 20 | 203 | 3 | 185 | 1.85e-60 | 187 |
| MS.gene42099.t1 | MTR_1g014150 | 46.486 | 185 | 90 | 5 | 21 | 203 | 12 | 189 | 3.48e-47 | 154 |
| MS.gene42099.t1 | MTR_1g014160 | 41.579 | 190 | 85 | 7 | 32 | 203 | 59 | 240 | 4.56e-30 | 111 |
| MS.gene42099.t1 | MTR_5g074550 | 35.556 | 180 | 102 | 5 | 32 | 202 | 17 | 191 | 1.71e-26 | 100 |
| MS.gene42099.t1 | MTR_2g103840 | 30.303 | 198 | 124 | 6 | 15 | 208 | 17 | 204 | 5.05e-25 | 97.8 |
| MS.gene42099.t1 | MTR_4g010180 | 28.261 | 184 | 126 | 5 | 26 | 206 | 11 | 191 | 7.24e-23 | 92.0 |
| MS.gene42099.t1 | MTR_5g074560 | 31.214 | 173 | 109 | 5 | 32 | 202 | 20 | 184 | 5.15e-21 | 86.7 |
| MS.gene42099.t1 | MTR_2g103850 | 27.317 | 205 | 139 | 6 | 10 | 209 | 7 | 206 | 3.51e-20 | 85.1 |
| MS.gene42099.t1 | MTR_0650s0010 | 28.571 | 189 | 120 | 6 | 27 | 203 | 12 | 197 | 1.96e-18 | 80.1 |
| MS.gene42099.t1 | MTR_8g099000 | 28.723 | 188 | 114 | 7 | 35 | 204 | 45 | 230 | 1.15e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42099.t1 | AT5G01750 | 61.722 | 209 | 79 | 1 | 2 | 210 | 8 | 215 | 2.01e-102 | 295 |
| MS.gene42099.t1 | AT3G11740 | 65.285 | 193 | 65 | 2 | 21 | 211 | 2 | 194 | 1.24e-92 | 269 |
| MS.gene42099.t1 | AT2G14560 | 55.556 | 189 | 84 | 0 | 19 | 207 | 4 | 192 | 7.23e-78 | 232 |
| MS.gene42099.t1 | AT1G33840 | 53.465 | 202 | 93 | 1 | 3 | 204 | 9 | 209 | 1.21e-77 | 233 |
| MS.gene42099.t1 | AT5G01750 | 60.241 | 166 | 65 | 1 | 2 | 167 | 8 | 172 | 3.20e-77 | 229 |
| MS.gene42099.t1 | AT2G14560 | 55.556 | 189 | 84 | 0 | 19 | 207 | 64 | 252 | 9.04e-77 | 232 |
| MS.gene42099.t1 | AT2G14560 | 52.500 | 160 | 76 | 0 | 19 | 178 | 4 | 163 | 1.64e-62 | 192 |
| MS.gene42099.t1 | AT2G14560 | 52.500 | 160 | 76 | 0 | 19 | 178 | 64 | 223 | 2.62e-61 | 191 |
| MS.gene42099.t1 | AT1G33840 | 51.205 | 166 | 80 | 1 | 3 | 168 | 9 | 173 | 9.14e-61 | 188 |
| MS.gene42099.t1 | AT3G16900 | 41.935 | 186 | 87 | 4 | 22 | 206 | 15 | 180 | 7.74e-49 | 158 |
| MS.gene42099.t1 | AT3G56180 | 35.602 | 191 | 117 | 3 | 21 | 208 | 17 | 204 | 1.29e-38 | 132 |
| MS.gene42099.t1 | AT3G56180 | 35.079 | 191 | 116 | 4 | 21 | 208 | 17 | 202 | 2.28e-36 | 127 |
| MS.gene42099.t1 | AT3G10986 | 32.292 | 192 | 124 | 3 | 21 | 206 | 3 | 194 | 1.01e-31 | 114 |
| MS.gene42099.t1 | AT3G15810 | 30.508 | 177 | 117 | 3 | 35 | 209 | 33 | 205 | 2.08e-26 | 101 |
| MS.gene42099.t1 | AT1G80120 | 32.961 | 179 | 113 | 4 | 35 | 209 | 19 | 194 | 1.00e-20 | 86.3 |
| MS.gene42099.t1 | AT2G30270 | 30.000 | 180 | 112 | 6 | 25 | 202 | 12 | 179 | 7.21e-17 | 75.5 |
| MS.gene42099.t1 | AT2G38640 | 30.286 | 175 | 113 | 5 | 33 | 204 | 23 | 191 | 2.34e-16 | 74.3 |
| MS.gene42099.t1 | AT5G20640 | 24.873 | 197 | 131 | 5 | 22 | 203 | 12 | 206 | 6.75e-15 | 70.9 |
| MS.gene42099.t1 | AT2G05910 | 26.042 | 192 | 121 | 7 | 21 | 203 | 3 | 182 | 7.57e-15 | 70.5 |
| MS.gene42099.t1 | AT5G41590 | 22.120 | 217 | 154 | 5 | 3 | 204 | 2 | 218 | 2.57e-12 | 63.9 |
Find 52 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGTCTTCATCTGGATTA+AGG | 0.216511 | 7.3:+32523979 | None:intergenic |
| AAAATCACAAACATCTTCTT+TGG | 0.257604 | 7.3:+32523931 | None:intergenic |
| ATGATAGGTGGGAAGCTTAT+AGG | 0.292307 | 7.3:-32524051 | MS.gene42099:CDS |
| TGATAGGTGGGAAGCTTATA+GGG | 0.297733 | 7.3:-32524050 | MS.gene42099:CDS |
| CATCTAATTTGGTCTTCATC+TGG | 0.334921 | 7.3:+32523972 | None:intergenic |
| GGATCTTGCCATCGTGAAAA+AGG | 0.339002 | 7.3:-32524721 | MS.gene42099:CDS |
| AGCTAGAAACACATCTAATT+TGG | 0.366171 | 7.3:+32523961 | None:intergenic |
| ACAGTATTGAGGACCGAATA+TGG | 0.368124 | 7.3:+32524758 | None:intergenic |
| CTTGCGACGGAGGGTGGTGA+TGG | 0.396422 | 7.3:+32524575 | None:intergenic |
| GAGGACCGAATATGGCGTTC+GGG | 0.411432 | 7.3:+32524766 | None:intergenic |
| GCAGCCCCGAACGCCATATT+CGG | 0.412629 | 7.3:-32524771 | MS.gene42099:CDS |
| ATCTGCATCTGCACCGATGC+AGG | 0.415902 | 7.3:-32524793 | MS.gene42099:CDS |
| TTCACGATGGCAAGATCCAC+TGG | 0.437250 | 7.3:+32524726 | None:intergenic |
| TTGCGACGGAGGGTGGTGAT+GGG | 0.452287 | 7.3:+32524576 | None:intergenic |
| TGAGGACCGAATATGGCGTT+CGG | 0.452612 | 7.3:+32524765 | None:intergenic |
| CGTGTCTTGCTTGATGCTGC+TGG | 0.455360 | 7.3:-32524603 | MS.gene42099:CDS |
| GCGTTCGGGGCTGCCTGCAT+CGG | 0.455509 | 7.3:+32524780 | None:intergenic |
| GGCGAAGTTTCCATCTGAAA+TGG | 0.475827 | 7.3:+32524692 | None:intergenic |
| CGATCTTGCATTGTTTATGC+TGG | 0.480226 | 7.3:-32523884 | MS.gene42099:CDS |
| ATGAAAGCGTAGTCAACATT+GGG | 0.498681 | 7.3:+32523650 | None:intergenic |
| AAATTAGATGTGTTTCTAGC+TGG | 0.501483 | 7.3:-32523959 | MS.gene42099:CDS |
| GCAGATGGCTGTGGTTGATA+AGG | 0.510803 | 7.3:+32524810 | None:intergenic |
| GATAAACCGTGACTGAGAAA+TGG | 0.513280 | 7.3:+32523672 | None:intergenic |
| AACATTGTATTCAAAGTGAA+AGG | 0.513412 | 7.3:-32524651 | MS.gene42099:CDS |
| CAAGCAAGACACGACGATCA+TGG | 0.522499 | 7.3:+32524613 | None:intergenic |
| TGTTGACTACGCTTTCATAG+TGG | 0.527609 | 7.3:-32523645 | MS.gene42099:CDS |
| ATCTAACCACATTGTTGCAC+AGG | 0.530405 | 7.3:-32523858 | MS.gene42099:intron |
| AGATAGTGACTATGCATGAT+AGG | 0.539221 | 7.3:-32524066 | MS.gene42099:CDS |
| TATGAAAGCGTAGTCAACAT+TGG | 0.542595 | 7.3:+32523649 | None:intergenic |
| TAAAGTCAGAGGTAGTTGGT+TGG | 0.551193 | 7.3:-32523909 | MS.gene42099:CDS |
| TAAAGACCATTTCTCAGTCA+CGG | 0.553557 | 7.3:-32523678 | MS.gene42099:CDS |
| ATGGCAAGATCCACTGGATA+CGG | 0.564173 | 7.3:+32524732 | None:intergenic |
| TGCGACGGAGGGTGGTGATG+GGG | 0.564704 | 7.3:+32524577 | None:intergenic |
| CATCACCACCCTCCGTCGCA+AGG | 0.565107 | 7.3:-32524574 | MS.gene42099:intron |
| TAGTGACTATGCATGATAGG+TGG | 0.565567 | 7.3:-32524063 | MS.gene42099:CDS |
| AGTGACTATGCATGATAGGT+GGG | 0.571139 | 7.3:-32524062 | MS.gene42099:CDS |
| AAGGTGATGACCATTTCAGA+TGG | 0.578907 | 7.3:-32524702 | MS.gene42099:CDS |
| GGTGCAGATGCAGATGGCTG+TGG | 0.586855 | 7.3:+32524801 | None:intergenic |
| GGATACGGAGCACAGTATTG+AGG | 0.603779 | 7.3:+32524747 | None:intergenic |
| TGCATCGGTGCAGATGCAGA+TGG | 0.610431 | 7.3:+32524795 | None:intergenic |
| TTGAACGTACCTTGCGACGG+AGG | 0.612314 | 7.3:+32524565 | None:intergenic |
| TGAACGTACCTTGCGACGGA+GGG | 0.617417 | 7.3:+32524566 | None:intergenic |
| ACGTACCTTGCGACGGAGGG+TGG | 0.620243 | 7.3:+32524569 | None:intergenic |
| GATAGGTGGGAAGCTTATAG+GGG | 0.640463 | 7.3:-32524049 | MS.gene42099:CDS |
| AGGACCGAATATGGCGTTCG+GGG | 0.642653 | 7.3:+32524767 | None:intergenic |
| TAATTACCTGTGCAACAATG+TGG | 0.644297 | 7.3:+32523852 | None:intergenic |
| ATACTGTGCTCCGTATCCAG+TGG | 0.648223 | 7.3:-32524742 | MS.gene42099:CDS |
| CAAGACACGACGATCATGGA+GGG | 0.648557 | 7.3:+32524617 | None:intergenic |
| GTTTCCGTTGACATCAGTGA+CGG | 0.656884 | 7.3:+32524671 | None:intergenic |
| TTCGCCGTCACTGATGTCAA+CGG | 0.668229 | 7.3:-32524675 | MS.gene42099:CDS |
| AAGTTGAACGTACCTTGCGA+CGG | 0.684930 | 7.3:+32524562 | None:intergenic |
| GCAAGACACGACGATCATGG+AGG | 0.713270 | 7.3:+32524616 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTGTTTTATTTTATTT+TGG | + | chr7.3:32524082-32524101 | None:intergenic | 10.0% |
| !! | ACAAAAATACTGAAATTATT+AGG | - | chr7.3:32523958-32523977 | MS.gene42099:CDS | 15.0% |
| !!! | AATAATTTCAGTATTTTTGT+CGG | + | chr7.3:32523958-32523977 | None:intergenic | 15.0% |
| !!! | TTTTAATTAATTACGTTGAT+TGG | - | chr7.3:32524621-32524640 | MS.gene42099:CDS | 15.0% |
| !! | AAAAATAAAAATGCTCAATC+CGG | + | chr7.3:32523927-32523946 | None:intergenic | 20.0% |
| ! | AAAATAAAAATGCTCAATCC+GGG | + | chr7.3:32523926-32523945 | None:intergenic | 25.0% |
| ! | AAAATCACAAACATCTTCTT+TGG | + | chr7.3:32524489-32524508 | None:intergenic | 25.0% |
| ! | AACATTGTATTCAAAGTGAA+AGG | - | chr7.3:32523766-32523785 | MS.gene42099:intron | 25.0% |
| ! | AGTACTATATCAGTTGAAAA+CGG | + | chr7.3:32524309-32524328 | None:intergenic | 25.0% |
| !! | ATTTAACAGTAATGTTTTCC+CGG | - | chr7.3:32523905-32523924 | MS.gene42099:CDS | 25.0% |
| !! | TAAGCACAAATCAATTTTCA+TGG | - | chr7.3:32524662-32524681 | MS.gene42099:CDS | 25.0% |
| !!! | ATCAACATTTTGTTTTGTGA+GGG | - | chr7.3:32524100-32524119 | MS.gene42099:intron | 25.0% |
| ACTATCAGCTCAATAATACA+TGG | - | chr7.3:32524158-32524177 | MS.gene42099:intron | 30.0% | |
| AGCTAGAAACACATCTAATT+TGG | + | chr7.3:32524459-32524478 | None:intergenic | 30.0% | |
| CTATCTGCTACACAAAATAA+TGG | - | chr7.3:32524046-32524065 | MS.gene42099:CDS | 30.0% | |
| GGGAAAACATTACTGTTAAA+TGG | + | chr7.3:32523906-32523925 | None:intergenic | 30.0% | |
| TACTGAAATTATTAGGTCGA+AGG | - | chr7.3:32523965-32523984 | MS.gene42099:CDS | 30.0% | |
| TATACTCTTGTATACACAAG+AGG | + | chr7.3:32524596-32524615 | None:intergenic | 30.0% | |
| ! | TACTGAATTTTGTCATGTTG+TGG | - | chr7.3:32524325-32524344 | MS.gene42099:intron | 30.0% |
| !! | AAATTAGATGTGTTTCTAGC+TGG | - | chr7.3:32524458-32524477 | MS.gene42099:intron | 30.0% |
| !! | CACTGTTACGAGTATTTTAA+TGG | - | chr7.3:32524715-32524734 | MS.gene42099:CDS | 30.0% |
| !!! | ATTTTAAAGTCAGAGGTAGT+TGG | - | chr7.3:32524504-32524523 | MS.gene42099:intron | 30.0% |
| !!! | GATCAACATTTTGTTTTGTG+AGG | - | chr7.3:32524099-32524118 | MS.gene42099:intron | 30.0% |
| !!! | GTTTGTGATTTTAAAGTCAG+AGG | - | chr7.3:32524497-32524516 | MS.gene42099:intron | 30.0% |
| AGATAGTGACTATGCATGAT+AGG | - | chr7.3:32524351-32524370 | MS.gene42099:intron | 35.0% | |
| ATCAGCTCAATAATACATGG+CGG | - | chr7.3:32524161-32524180 | MS.gene42099:intron | 35.0% | |
| GTAACTAATACATGCTAGAG+AGG | + | chr7.3:32524225-32524244 | None:intergenic | 35.0% | |
| TAAAGACCATTTCTCAGTCA+CGG | - | chr7.3:32524739-32524758 | MS.gene42099:CDS | 35.0% | |
| TAATTACCTGTGCAACAATG+TGG | + | chr7.3:32524568-32524587 | None:intergenic | 35.0% | |
| ! | ATGAAAGCGTAGTCAACATT+GGG | + | chr7.3:32524770-32524789 | None:intergenic | 35.0% |
| ! | CATCTAATTTGGTCTTCATC+TGG | + | chr7.3:32524448-32524467 | None:intergenic | 35.0% |
| ! | TATGAAAGCGTAGTCAACAT+TGG | + | chr7.3:32524771-32524790 | None:intergenic | 35.0% |
| ! | TTTGGTCTTCATCTGGATTA+AGG | + | chr7.3:32524441-32524460 | None:intergenic | 35.0% |
| AAGGTGATGACCATTTCAGA+TGG | - | chr7.3:32523715-32523734 | MS.gene42099:CDS | 40.0% | |
| AGTGACTATGCATGATAGGT+GGG | - | chr7.3:32524355-32524374 | MS.gene42099:intron | 40.0% | |
| ATCTAACCACATTGTTGCAC+AGG | - | chr7.3:32524559-32524578 | MS.gene42099:intron | 40.0% | |
| ATGATAGGTGGGAAGCTTAT+AGG | - | chr7.3:32524366-32524385 | MS.gene42099:intron | 40.0% | |
| CGATCTTGCATTGTTTATGC+TGG | - | chr7.3:32524533-32524552 | MS.gene42099:intron | 40.0% | |
| GATAAACCGTGACTGAGAAA+TGG | + | chr7.3:32524748-32524767 | None:intergenic | 40.0% | |
| TAAAGTCAGAGGTAGTTGGT+TGG | - | chr7.3:32524508-32524527 | MS.gene42099:intron | 40.0% | |
| TAGTGACTATGCATGATAGG+TGG | - | chr7.3:32524354-32524373 | MS.gene42099:intron | 40.0% | |
| TGATAGGTGGGAAGCTTATA+GGG | - | chr7.3:32524367-32524386 | MS.gene42099:intron | 40.0% | |
| TTACTTCATTCGCTTGTCTC+AGG | - | chr7.3:32524241-32524260 | MS.gene42099:intron | 40.0% | |
| ! | ACAGTATTGAGGACCGAATA+TGG | + | chr7.3:32523662-32523681 | None:intergenic | 40.0% |
| ! | TGTTGACTACGCTTTCATAG+TGG | - | chr7.3:32524772-32524791 | MS.gene42099:CDS | 40.0% |
| AAGTTGAACGTACCTTGCGA+CGG | + | chr7.3:32523858-32523877 | None:intergenic | 45.0% | |
| ATGGCAAGATCCACTGGATA+CGG | + | chr7.3:32523688-32523707 | None:intergenic | 45.0% | |
| GATAGGTGGGAAGCTTATAG+GGG | - | chr7.3:32524368-32524387 | MS.gene42099:intron | 45.0% | |
| GGATCTTGCCATCGTGAAAA+AGG | - | chr7.3:32523696-32523715 | MS.gene42099:CDS | 45.0% | |
| GGCGAAGTTTCCATCTGAAA+TGG | + | chr7.3:32523728-32523747 | None:intergenic | 45.0% | |
| GTTTCCGTTGACATCAGTGA+CGG | + | chr7.3:32523749-32523768 | None:intergenic | 45.0% | |
| !! | GGTCATCACCTTTTTCACGA+TGG | + | chr7.3:32523707-32523726 | None:intergenic | 45.0% |
| ATACTGTGCTCCGTATCCAG+TGG | - | chr7.3:32523675-32523694 | MS.gene42099:CDS | 50.0% | |
| CAAGACACGACGATCATGGA+GGG | + | chr7.3:32523803-32523822 | None:intergenic | 50.0% | |
| CAAGCAAGACACGACGATCA+TGG | + | chr7.3:32523807-32523826 | None:intergenic | 50.0% | |
| GGATACGGAGCACAGTATTG+AGG | + | chr7.3:32523673-32523692 | None:intergenic | 50.0% | |
| TGAGGACCGAATATGGCGTT+CGG | + | chr7.3:32523655-32523674 | None:intergenic | 50.0% | |
| TTCACGATGGCAAGATCCAC+TGG | + | chr7.3:32523694-32523713 | None:intergenic | 50.0% | |
| TTCGCCGTCACTGATGTCAA+CGG | - | chr7.3:32523742-32523761 | MS.gene42099:intron | 50.0% | |
| ! | GCAGATGGCTGTGGTTGATA+AGG | + | chr7.3:32523610-32523629 | None:intergenic | 50.0% |
| AGGACCGAATATGGCGTTCG+GGG | + | chr7.3:32523653-32523672 | None:intergenic | 55.0% | |
| CGTGTCTTGCTTGATGCTGC+TGG | - | chr7.3:32523814-32523833 | MS.gene42099:intron | 55.0% | |
| GAGGACCGAATATGGCGTTC+GGG | + | chr7.3:32523654-32523673 | None:intergenic | 55.0% | |
| GCAAGACACGACGATCATGG+AGG | + | chr7.3:32523804-32523823 | None:intergenic | 55.0% | |
| TGAACGTACCTTGCGACGGA+GGG | + | chr7.3:32523854-32523873 | None:intergenic | 55.0% | |
| TTGAACGTACCTTGCGACGG+AGG | + | chr7.3:32523855-32523874 | None:intergenic | 55.0% | |
| ! | ATCTGCATCTGCACCGATGC+AGG | - | chr7.3:32523624-32523643 | MS.gene42099:CDS | 55.0% |
| ! | TGCATCGGTGCAGATGCAGA+TGG | + | chr7.3:32523625-32523644 | None:intergenic | 55.0% |
| GCAGCCCCGAACGCCATATT+CGG | - | chr7.3:32523646-32523665 | MS.gene42099:CDS | 60.0% | |
| GGTGCAGATGCAGATGGCTG+TGG | + | chr7.3:32523619-32523638 | None:intergenic | 60.0% | |
| TTGCGACGGAGGGTGGTGAT+GGG | + | chr7.3:32523844-32523863 | None:intergenic | 60.0% | |
| ACGTACCTTGCGACGGAGGG+TGG | + | chr7.3:32523851-32523870 | None:intergenic | 65.0% | |
| CATCACCACCCTCCGTCGCA+AGG | - | chr7.3:32523843-32523862 | MS.gene42099:intron | 65.0% | |
| CTTGCGACGGAGGGTGGTGA+TGG | + | chr7.3:32523845-32523864 | None:intergenic | 65.0% | |
| ! | TGCGACGGAGGGTGGTGATG+GGG | + | chr7.3:32523843-32523862 | None:intergenic | 65.0% |
| GCGTTCGGGGCTGCCTGCAT+CGG | + | chr7.3:32523640-32523659 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 32523598 | 32524841 | 32523598 | ID=MS.gene42099 |
| chr7.3 | mRNA | 32523598 | 32524841 | 32523598 | ID=MS.gene42099.t1;Parent=MS.gene42099 |
| chr7.3 | exon | 32524575 | 32524841 | 32524575 | ID=MS.gene42099.t1.exon1;Parent=MS.gene42099.t1 |
| chr7.3 | CDS | 32524575 | 32524841 | 32524575 | ID=cds.MS.gene42099.t1;Parent=MS.gene42099.t1 |
| chr7.3 | exon | 32523859 | 32524086 | 32523859 | ID=MS.gene42099.t1.exon2;Parent=MS.gene42099.t1 |
| chr7.3 | CDS | 32523859 | 32524086 | 32523859 | ID=cds.MS.gene42099.t1;Parent=MS.gene42099.t1 |
| chr7.3 | exon | 32523598 | 32523738 | 32523598 | ID=MS.gene42099.t1.exon3;Parent=MS.gene42099.t1 |
| chr7.3 | CDS | 32523598 | 32523738 | 32523598 | ID=cds.MS.gene42099.t1;Parent=MS.gene42099.t1 |
| Gene Sequence |
| Protein sequence |
