Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53276.t1 | XP_003598046.1 | 88.4 | 276 | 7 | 2 | 1 | 251 | 24 | 299 | 8.50E-133 | 483 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53276.t1 | Q8L5Z1 | 62.5 | 275 | 75 | 4 | 5 | 251 | 25 | 299 | 2.0e-90 | 333.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53276.t1 | G7IYG5 | 88.4 | 276 | 7 | 2 | 1 | 251 | 24 | 299 | 6.1e-133 | 483.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene53276 | 0.8473 | 1.26E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene53276 | 0.853191 | 2.81E-61 | -1.69E-46 |
| MS.gene049828 | MS.gene53276 | 0.8535 | 2.29E-61 | -1.69E-46 |
| MS.gene049907 | MS.gene53276 | 0.897637 | 1.16E-76 | -1.69E-46 |
| MS.gene050128 | MS.gene53276 | 0.839575 | 1.46E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene53276 | 0.80497 | 1.67E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene53276 | 0.813671 | 2.27E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene53276 | 0.864653 | 1.04E-64 | -1.69E-46 |
| MS.gene050581 | MS.gene53276 | 0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene050686 | MS.gene53276 | 0.81775 | 2.80E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene53276 | 0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene53276 | 0.817432 | 3.31E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene53276 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene051360 | MS.gene53276 | 0.833115 | 6.42E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene53276 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene53276 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene53276 | 0.814052 | 1.87E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene53276 | 0.805228 | 1.48E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene53276 | 0.834584 | 2.75E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene53276 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene53276 | 0.821075 | 4.90E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene53276 | 0.893821 | 4.40E-75 | -1.69E-46 |
| MS.gene054010 | MS.gene53276 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene53276 | 0.836678 | 8.13E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene53276 | 0.814424 | 1.55E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene53276 | 0.810864 | 9.33E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene53276 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene055802 | MS.gene53276 | 0.846044 | 2.78E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene53276 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene53276 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene53276 | 0.835307 | 1.81E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene53276 | 0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene53276 | 0.821859 | 3.23E-53 | -1.69E-46 |
| MS.gene056611 | MS.gene53276 | 0.824287 | 8.76E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene53276 | 0.807761 | 4.32E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene53276 | 0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene53276 | 0.804627 | 1.97E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene53276 | 0.806384 | 8.44E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene53276 | 0.806411 | 8.33E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene53276 | 0.808219 | 3.45E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene53276 | 0.814944 | 1.19E-51 | -1.69E-46 |
| MS.gene057537 | MS.gene53276 | 0.825446 | 4.67E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene53276 | 0.823121 | 1.64E-53 | -1.69E-46 |
| MS.gene057927 | MS.gene53276 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene05806 | MS.gene53276 | 0.827089 | 1.90E-54 | -1.69E-46 |
| MS.gene058075 | MS.gene53276 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene058293 | MS.gene53276 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene53276 | 0.822008 | 2.98E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene53276 | 0.84458 | 6.92E-59 | -1.69E-46 |
| MS.gene058903 | MS.gene53276 | 0.831793 | 1.37E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene53276 | 0.812521 | 4.07E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene53276 | 0.813782 | 2.15E-51 | -1.69E-46 |
| MS.gene05959 | MS.gene53276 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene53276 | 0.844476 | 7.39E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene53276 | 0.829448 | 5.12E-55 | -1.69E-46 |
| MS.gene059680 | MS.gene53276 | 0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene53276 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene53276 | 0.831554 | 1.56E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene53276 | 0.83339 | 5.48E-56 | -1.69E-46 |
| MS.gene059708 | MS.gene53276 | 0.809086 | 2.25E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene53276 | 0.870105 | 1.88E-66 | -1.69E-46 |
| MS.gene059807 | MS.gene53276 | 0.812874 | 3.40E-51 | -1.69E-46 |
| MS.gene05986 | MS.gene53276 | 0.80992 | 1.49E-50 | -1.69E-46 |
| MS.gene059974 | MS.gene53276 | 0.86378 | 1.95E-64 | -1.69E-46 |
| MS.gene060005 | MS.gene53276 | 0.876849 | 1.01E-68 | -1.69E-46 |
| MS.gene060193 | MS.gene53276 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene53276 | 0.838626 | 2.57E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene53276 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene060569 | MS.gene53276 | 0.840977 | 6.28E-58 | -1.69E-46 |
| MS.gene060799 | MS.gene53276 | 0.837542 | 4.89E-57 | -1.69E-46 |
| MS.gene060800 | MS.gene53276 | 0.844663 | 6.58E-59 | -1.69E-46 |
| MS.gene060801 | MS.gene53276 | 0.846714 | 1.83E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene53276 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene53276 | 0.845156 | 4.84E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene53276 | -0.825044 | 5.81E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene53276 | 0.82194 | 3.09E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53276.t1 | MTR_3g005660 | 88.406 | 276 | 7 | 2 | 1 | 251 | 24 | 299 | 1.17e-173 | 483 |
| MS.gene53276.t1 | MTR_0565s0010 | 51.119 | 268 | 105 | 3 | 8 | 251 | 27 | 292 | 8.72e-82 | 249 |
| MS.gene53276.t1 | MTR_8g087890 | 51.128 | 266 | 103 | 4 | 10 | 251 | 28 | 290 | 5.72e-78 | 240 |
| MS.gene53276.t1 | MTR_3g024510 | 50.000 | 266 | 106 | 4 | 10 | 251 | 35 | 297 | 2.78e-76 | 236 |
| MS.gene53276.t1 | MTR_8g087870 | 45.200 | 250 | 110 | 4 | 10 | 235 | 26 | 272 | 9.76e-68 | 213 |
| MS.gene53276.t1 | MTR_2g017915 | 47.210 | 233 | 111 | 3 | 10 | 235 | 30 | 257 | 3.90e-64 | 204 |
| MS.gene53276.t1 | MTR_2g017925 | 44.980 | 249 | 113 | 2 | 10 | 235 | 30 | 277 | 8.74e-64 | 204 |
| MS.gene53276.t1 | MTR_3g005650 | 42.491 | 273 | 130 | 6 | 1 | 251 | 18 | 285 | 3.10e-62 | 199 |
| MS.gene53276.t1 | MTR_2g017955 | 43.373 | 249 | 117 | 2 | 10 | 235 | 30 | 277 | 8.55e-62 | 199 |
| MS.gene53276.t1 | MTR_2g017875 | 42.751 | 269 | 127 | 6 | 7 | 250 | 28 | 294 | 5.33e-58 | 189 |
| MS.gene53276.t1 | MTR_3g023220 | 42.126 | 254 | 121 | 6 | 10 | 243 | 30 | 277 | 7.99e-58 | 188 |
| MS.gene53276.t1 | MTR_2g017965 | 41.860 | 258 | 124 | 4 | 10 | 242 | 30 | 286 | 4.00e-57 | 187 |
| MS.gene53276.t1 | MTR_3g098270 | 38.909 | 275 | 135 | 7 | 6 | 251 | 27 | 297 | 1.17e-55 | 183 |
| MS.gene53276.t1 | MTR_2g018015 | 46.597 | 191 | 100 | 2 | 5 | 194 | 28 | 217 | 8.84e-51 | 168 |
| MS.gene53276.t1 | MTR_4g035353 | 35.115 | 262 | 138 | 6 | 9 | 243 | 27 | 283 | 5.09e-42 | 147 |
| MS.gene53276.t1 | MTR_2g033930 | 36.431 | 269 | 137 | 7 | 10 | 251 | 29 | 290 | 6.92e-39 | 139 |
| MS.gene53276.t1 | MTR_5g078210 | 36.466 | 266 | 136 | 9 | 15 | 253 | 27 | 286 | 3.83e-37 | 133 |
| MS.gene53276.t1 | MTR_4g122200 | 36.059 | 269 | 138 | 10 | 11 | 251 | 33 | 295 | 4.00e-37 | 134 |
| MS.gene53276.t1 | MTR_5g078210 | 36.364 | 264 | 135 | 9 | 15 | 251 | 27 | 284 | 4.08e-36 | 131 |
| MS.gene53276.t1 | MTR_5g009100 | 35.206 | 267 | 135 | 10 | 15 | 251 | 48 | 306 | 1.40e-35 | 130 |
| MS.gene53276.t1 | MTR_2g033920 | 35.338 | 266 | 140 | 9 | 15 | 253 | 37 | 297 | 1.74e-35 | 129 |
| MS.gene53276.t1 | MTR_2g033920 | 35.606 | 264 | 138 | 9 | 15 | 251 | 37 | 295 | 5.74e-35 | 129 |
| MS.gene53276.t1 | MTR_1g069175 | 33.942 | 274 | 141 | 9 | 14 | 255 | 34 | 299 | 1.15e-33 | 125 |
| MS.gene53276.t1 | MTR_0009s0250 | 32.847 | 274 | 143 | 8 | 7 | 253 | 27 | 286 | 2.10e-33 | 124 |
| MS.gene53276.t1 | MTR_7g116570 | 31.429 | 280 | 163 | 8 | 1 | 255 | 23 | 298 | 4.91e-32 | 121 |
| MS.gene53276.t1 | MTR_3g021460 | 34.783 | 253 | 130 | 9 | 11 | 235 | 29 | 274 | 6.31e-32 | 120 |
| MS.gene53276.t1 | MTR_2g461580 | 33.984 | 256 | 134 | 9 | 11 | 238 | 29 | 277 | 4.93e-31 | 118 |
| MS.gene53276.t1 | MTR_4g056280 | 30.970 | 268 | 152 | 8 | 11 | 251 | 28 | 289 | 7.88e-31 | 117 |
| MS.gene53276.t1 | MTR_1g025700 | 31.636 | 275 | 155 | 9 | 4 | 251 | 41 | 309 | 2.04e-30 | 116 |
| MS.gene53276.t1 | MTR_2g084585 | 33.333 | 261 | 141 | 9 | 11 | 244 | 28 | 282 | 2.92e-30 | 115 |
| MS.gene53276.t1 | MTR_1g025720 | 31.636 | 275 | 155 | 10 | 4 | 251 | 28 | 296 | 5.92e-30 | 115 |
| MS.gene53276.t1 | MTR_8g079050 | 35.741 | 263 | 135 | 10 | 15 | 246 | 39 | 298 | 1.19e-29 | 114 |
| MS.gene53276.t1 | MTR_4g056160 | 31.227 | 269 | 151 | 9 | 11 | 251 | 25 | 287 | 5.54e-29 | 112 |
| MS.gene53276.t1 | MTR_1g024890 | 28.881 | 277 | 163 | 7 | 7 | 255 | 26 | 296 | 8.87e-29 | 112 |
| MS.gene53276.t1 | MTR_5g084750 | 33.460 | 263 | 138 | 11 | 10 | 243 | 27 | 281 | 1.18e-28 | 111 |
| MS.gene53276.t1 | MTR_3g114090 | 32.482 | 274 | 151 | 11 | 6 | 251 | 29 | 296 | 1.54e-28 | 111 |
| MS.gene53276.t1 | MTR_1g025780 | 30.000 | 280 | 156 | 9 | 2 | 251 | 30 | 299 | 1.78e-28 | 111 |
| MS.gene53276.t1 | MTR_8g014910 | 31.343 | 268 | 151 | 8 | 11 | 251 | 30 | 291 | 4.99e-28 | 110 |
| MS.gene53276.t1 | MTR_2g100620 | 31.203 | 266 | 154 | 7 | 11 | 251 | 29 | 290 | 5.34e-28 | 110 |
| MS.gene53276.t1 | MTR_1g079530 | 33.761 | 234 | 128 | 6 | 14 | 222 | 30 | 261 | 6.17e-28 | 110 |
| MS.gene53276.t1 | MTR_3g435540 | 36.364 | 264 | 136 | 11 | 15 | 251 | 25 | 283 | 6.31e-28 | 110 |
| MS.gene53276.t1 | MTR_1g079540 | 30.224 | 268 | 153 | 7 | 14 | 253 | 32 | 293 | 1.99e-27 | 108 |
| MS.gene53276.t1 | MTR_7g116520 | 31.461 | 267 | 155 | 6 | 14 | 255 | 35 | 298 | 2.04e-27 | 108 |
| MS.gene53276.t1 | MTR_5g022630 | 34.286 | 280 | 139 | 14 | 6 | 251 | 36 | 304 | 2.99e-27 | 108 |
| MS.gene53276.t1 | MTR_1g079590 | 32.979 | 188 | 122 | 4 | 7 | 192 | 25 | 210 | 4.10e-27 | 104 |
| MS.gene53276.t1 | MTR_8g075230 | 31.136 | 273 | 155 | 8 | 6 | 251 | 29 | 295 | 7.27e-27 | 107 |
| MS.gene53276.t1 | MTR_1g025760 | 29.242 | 277 | 165 | 10 | 1 | 251 | 69 | 340 | 9.74e-27 | 107 |
| MS.gene53276.t1 | MTR_4g108690 | 32.819 | 259 | 142 | 8 | 15 | 246 | 29 | 282 | 1.51e-26 | 106 |
| MS.gene53276.t1 | MTR_3g114120 | 30.108 | 279 | 158 | 11 | 2 | 251 | 36 | 306 | 2.99e-26 | 105 |
| MS.gene53276.t1 | MTR_7g116500 | 36.723 | 177 | 108 | 4 | 14 | 188 | 34 | 208 | 3.05e-26 | 105 |
| MS.gene53276.t1 | MTR_3g052480 | 30.037 | 273 | 160 | 8 | 7 | 251 | 27 | 296 | 4.21e-26 | 105 |
| MS.gene53276.t1 | MTR_5g093090 | 36.269 | 193 | 107 | 7 | 8 | 190 | 23 | 209 | 1.93e-25 | 100 |
| MS.gene53276.t1 | MTR_3g052490 | 30.403 | 273 | 158 | 9 | 7 | 251 | 26 | 294 | 2.13e-25 | 103 |
| MS.gene53276.t1 | MTR_1g025680 | 31.522 | 276 | 151 | 12 | 6 | 251 | 27 | 294 | 4.66e-25 | 103 |
| MS.gene53276.t1 | MTR_6g021530 | 35.676 | 185 | 113 | 5 | 7 | 187 | 22 | 204 | 5.36e-25 | 102 |
| MS.gene53276.t1 | MTR_7g116510 | 29.924 | 264 | 156 | 7 | 14 | 251 | 26 | 286 | 5.88e-25 | 102 |
| MS.gene53276.t1 | MTR_5g093090 | 30.909 | 275 | 152 | 9 | 8 | 251 | 23 | 290 | 1.16e-24 | 100 |
| MS.gene53276.t1 | MTR_2g017895 | 36.842 | 171 | 100 | 3 | 59 | 222 | 4 | 173 | 1.75e-24 | 99.0 |
| MS.gene53276.t1 | MTR_5g022640 | 30.824 | 279 | 149 | 11 | 6 | 251 | 36 | 303 | 2.06e-24 | 100 |
| MS.gene53276.t1 | MTR_5g093090 | 30.909 | 275 | 152 | 9 | 8 | 251 | 23 | 290 | 2.74e-24 | 100 |
| MS.gene53276.t1 | MTR_3g082830 | 30.620 | 258 | 146 | 11 | 7 | 237 | 32 | 283 | 3.35e-24 | 99.8 |
| MS.gene53276.t1 | MTR_5g084790 | 30.469 | 256 | 143 | 11 | 10 | 237 | 29 | 277 | 4.13e-24 | 99.4 |
| MS.gene53276.t1 | MTR_4g019880 | 29.323 | 266 | 156 | 8 | 14 | 251 | 33 | 294 | 6.68e-24 | 99.0 |
| MS.gene53276.t1 | MTR_3g052580 | 33.684 | 190 | 111 | 6 | 7 | 187 | 22 | 205 | 1.90e-23 | 98.2 |
| MS.gene53276.t1 | MTR_3g052580 | 33.684 | 190 | 111 | 6 | 7 | 187 | 21 | 204 | 2.40e-23 | 98.2 |
| MS.gene53276.t1 | MTR_5g074270 | 38.926 | 149 | 85 | 5 | 14 | 159 | 34 | 179 | 3.20e-23 | 97.1 |
| MS.gene53276.t1 | MTR_7g008060 | 28.839 | 267 | 149 | 7 | 14 | 255 | 34 | 284 | 2.69e-22 | 94.4 |
| MS.gene53276.t1 | MTR_5g084770 | 30.502 | 259 | 150 | 8 | 11 | 243 | 26 | 280 | 3.37e-22 | 94.4 |
| MS.gene53276.t1 | MTR_3g464730 | 31.276 | 243 | 130 | 11 | 10 | 222 | 25 | 260 | 1.12e-21 | 92.8 |
| MS.gene53276.t1 | MTR_2g015080 | 35.443 | 158 | 89 | 4 | 10 | 159 | 35 | 187 | 2.92e-21 | 91.7 |
| MS.gene53276.t1 | MTR_8g074570 | 30.182 | 275 | 154 | 10 | 7 | 251 | 32 | 298 | 5.40e-21 | 91.3 |
| MS.gene53276.t1 | MTR_6g049220 | 47.917 | 96 | 47 | 2 | 11 | 103 | 28 | 123 | 1.61e-20 | 85.9 |
| MS.gene53276.t1 | MTR_8g031420 | 29.304 | 273 | 146 | 11 | 9 | 251 | 31 | 286 | 1.80e-20 | 89.7 |
| MS.gene53276.t1 | MTR_5g083040 | 30.147 | 272 | 143 | 8 | 10 | 244 | 29 | 290 | 4.24e-20 | 88.6 |
| MS.gene53276.t1 | MTR_8g031390 | 36.842 | 171 | 86 | 7 | 15 | 180 | 39 | 192 | 9.06e-20 | 87.0 |
| MS.gene53276.t1 | MTR_2g087292 | 30.165 | 242 | 109 | 9 | 9 | 239 | 29 | 221 | 1.40e-19 | 85.9 |
| MS.gene53276.t1 | MTR_8g031390 | 36.842 | 171 | 86 | 7 | 15 | 180 | 39 | 192 | 1.46e-19 | 87.0 |
| MS.gene53276.t1 | MTR_4g036375 | 35.294 | 153 | 93 | 5 | 11 | 160 | 28 | 177 | 3.16e-19 | 83.2 |
| MS.gene53276.t1 | MTR_8g022810 | 32.127 | 221 | 122 | 9 | 15 | 232 | 43 | 238 | 7.14e-19 | 84.7 |
| MS.gene53276.t1 | MTR_1g025910 | 28.807 | 243 | 147 | 6 | 18 | 237 | 41 | 280 | 8.44e-19 | 85.1 |
| MS.gene53276.t1 | MTR_8g031430 | 28.358 | 268 | 145 | 10 | 14 | 251 | 38 | 288 | 9.00e-19 | 84.7 |
| MS.gene53276.t1 | MTR_8g022810 | 32.127 | 221 | 122 | 9 | 15 | 232 | 43 | 238 | 1.02e-18 | 84.7 |
| MS.gene53276.t1 | MTR_8g075200 | 25.368 | 272 | 170 | 9 | 7 | 251 | 35 | 300 | 2.99e-18 | 83.6 |
| MS.gene53276.t1 | MTR_2g044100 | 36.242 | 149 | 86 | 6 | 14 | 159 | 44 | 186 | 3.56e-18 | 83.6 |
| MS.gene53276.t1 | MTR_8g075220 | 23.897 | 272 | 175 | 8 | 9 | 251 | 36 | 304 | 5.13e-18 | 82.8 |
| MS.gene53276.t1 | MTR_8g074560 | 28.030 | 264 | 140 | 10 | 7 | 231 | 25 | 277 | 6.21e-18 | 82.4 |
| MS.gene53276.t1 | MTR_8g031400 | 28.358 | 268 | 145 | 10 | 14 | 251 | 38 | 288 | 1.02e-16 | 79.0 |
| MS.gene53276.t1 | MTR_1g060490 | 29.249 | 253 | 138 | 8 | 14 | 243 | 38 | 272 | 1.94e-16 | 78.2 |
| MS.gene53276.t1 | MTR_4g087985 | 31.081 | 148 | 96 | 4 | 15 | 159 | 38 | 182 | 2.57e-16 | 77.8 |
| MS.gene53276.t1 | MTR_0127s0040 | 28.070 | 171 | 99 | 2 | 106 | 253 | 1 | 170 | 6.70e-16 | 75.1 |
| MS.gene53276.t1 | MTR_1g060500 | 28.854 | 253 | 136 | 8 | 14 | 239 | 41 | 276 | 3.01e-15 | 74.7 |
| MS.gene53276.t1 | MTR_8g022790 | 35.862 | 145 | 82 | 5 | 14 | 154 | 38 | 175 | 1.14e-14 | 73.2 |
| MS.gene53276.t1 | MTR_8g074580 | 31.646 | 158 | 98 | 4 | 7 | 156 | 38 | 193 | 1.40e-14 | 73.2 |
| MS.gene53276.t1 | MTR_2g079090 | 25.651 | 269 | 147 | 10 | 14 | 243 | 31 | 285 | 2.03e-13 | 69.3 |
| MS.gene53276.t1 | MTR_2g079080 | 25.651 | 269 | 147 | 10 | 14 | 243 | 31 | 285 | 2.19e-13 | 69.3 |
| MS.gene53276.t1 | MTR_2g017925 | 31.544 | 149 | 78 | 2 | 110 | 235 | 27 | 174 | 2.30e-13 | 68.6 |
| MS.gene53276.t1 | MTR_7g087190 | 27.239 | 268 | 155 | 10 | 10 | 243 | 40 | 301 | 2.44e-13 | 69.3 |
| MS.gene53276.t1 | MTR_0029s0050 | 25.651 | 269 | 147 | 10 | 14 | 243 | 31 | 285 | 2.75e-13 | 68.9 |
| MS.gene53276.t1 | MTR_1g092740 | 28.514 | 249 | 132 | 11 | 14 | 239 | 39 | 264 | 1.77e-12 | 66.6 |
| MS.gene53276.t1 | MTR_3g463960 | 24.806 | 258 | 151 | 10 | 15 | 237 | 46 | 295 | 5.85e-12 | 65.1 |
| MS.gene53276.t1 | MTR_3g463950 | 24.806 | 258 | 151 | 10 | 15 | 237 | 46 | 295 | 5.85e-12 | 65.1 |
| MS.gene53276.t1 | MTR_3g463970 | 24.806 | 258 | 151 | 10 | 15 | 237 | 46 | 295 | 5.85e-12 | 65.1 |
| MS.gene53276.t1 | MTR_3g463940 | 24.806 | 258 | 151 | 10 | 15 | 237 | 46 | 295 | 5.85e-12 | 65.1 |
| MS.gene53276.t1 | MTR_7g104220 | 34.234 | 111 | 66 | 3 | 14 | 123 | 43 | 147 | 8.52e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53276.t1 | AT1G33811 | 62.545 | 275 | 75 | 4 | 5 | 251 | 25 | 299 | 1.70e-113 | 331 |
| MS.gene53276.t1 | AT4G18970 | 51.136 | 264 | 103 | 3 | 12 | 251 | 27 | 288 | 7.44e-79 | 242 |
| MS.gene53276.t1 | AT4G18970 | 51.136 | 264 | 103 | 3 | 12 | 251 | 27 | 288 | 3.52e-78 | 242 |
| MS.gene53276.t1 | AT5G45670 | 50.379 | 264 | 105 | 4 | 12 | 251 | 28 | 289 | 4.43e-76 | 235 |
| MS.gene53276.t1 | AT1G29670 | 48.302 | 265 | 111 | 5 | 10 | 251 | 29 | 290 | 1.59e-73 | 228 |
| MS.gene53276.t1 | AT1G29670 | 48.302 | 265 | 111 | 5 | 10 | 251 | 97 | 358 | 3.62e-73 | 229 |
| MS.gene53276.t1 | AT1G29660 | 47.744 | 266 | 112 | 5 | 10 | 251 | 29 | 291 | 1.28e-71 | 224 |
| MS.gene53276.t1 | AT2G19010 | 39.216 | 255 | 119 | 5 | 8 | 237 | 25 | 268 | 1.60e-58 | 189 |
| MS.gene53276.t1 | AT2G19010 | 39.216 | 255 | 119 | 5 | 8 | 237 | 55 | 298 | 4.72e-58 | 189 |
| MS.gene53276.t1 | AT1G71691 | 42.105 | 266 | 124 | 6 | 11 | 252 | 53 | 312 | 5.14e-58 | 187 |
| MS.gene53276.t1 | AT5G15720 | 43.956 | 273 | 121 | 8 | 12 | 256 | 29 | 297 | 1.97e-57 | 186 |
| MS.gene53276.t1 | AT5G15720 | 43.750 | 272 | 121 | 8 | 12 | 255 | 29 | 296 | 1.20e-56 | 185 |
| MS.gene53276.t1 | AT1G71691 | 41.887 | 265 | 124 | 6 | 11 | 251 | 53 | 311 | 1.64e-56 | 185 |
| MS.gene53276.t1 | AT2G19050 | 39.080 | 261 | 127 | 4 | 8 | 245 | 26 | 277 | 3.32e-56 | 181 |
| MS.gene53276.t1 | AT2G19050 | 39.080 | 261 | 127 | 4 | 8 | 245 | 26 | 277 | 1.99e-55 | 182 |
| MS.gene53276.t1 | AT2G19060 | 39.163 | 263 | 128 | 4 | 1 | 239 | 18 | 272 | 1.54e-54 | 179 |
| MS.gene53276.t1 | AT4G30140 | 40.370 | 270 | 125 | 6 | 7 | 251 | 27 | 285 | 3.33e-54 | 178 |
| MS.gene53276.t1 | AT1G71250 | 39.286 | 280 | 138 | 8 | 1 | 251 | 25 | 301 | 1.70e-49 | 167 |
| MS.gene53276.t1 | AT5G08460 | 38.636 | 264 | 130 | 7 | 12 | 246 | 48 | 308 | 1.25e-47 | 162 |
| MS.gene53276.t1 | AT5G37690 | 35.294 | 272 | 147 | 7 | 5 | 251 | 19 | 286 | 3.38e-36 | 132 |
| MS.gene53276.t1 | AT4G16230 | 42.703 | 185 | 98 | 6 | 8 | 188 | 25 | 205 | 3.13e-35 | 126 |
| MS.gene53276.t1 | AT4G10950 | 34.307 | 274 | 148 | 8 | 5 | 251 | 63 | 331 | 8.43e-35 | 129 |
| MS.gene53276.t1 | AT5G22810 | 32.975 | 279 | 152 | 10 | 1 | 251 | 25 | 296 | 9.01e-33 | 122 |
| MS.gene53276.t1 | AT3G50400 | 37.175 | 269 | 134 | 10 | 15 | 251 | 36 | 301 | 1.05e-32 | 123 |
| MS.gene53276.t1 | AT2G23540 | 38.113 | 265 | 126 | 11 | 15 | 246 | 50 | 309 | 1.52e-32 | 122 |
| MS.gene53276.t1 | AT4G10950 | 33.212 | 274 | 147 | 8 | 5 | 251 | 63 | 327 | 3.41e-32 | 122 |
| MS.gene53276.t1 | AT5G37690 | 34.191 | 272 | 142 | 8 | 5 | 251 | 19 | 278 | 4.47e-31 | 118 |
| MS.gene53276.t1 | AT5G15720 | 36.000 | 225 | 113 | 7 | 59 | 255 | 44 | 265 | 6.40e-31 | 117 |
| MS.gene53276.t1 | AT3G14820 | 30.224 | 268 | 150 | 9 | 11 | 251 | 30 | 287 | 6.88e-30 | 115 |
| MS.gene53276.t1 | AT1G20130 | 32.950 | 261 | 143 | 9 | 7 | 237 | 178 | 436 | 2.80e-29 | 115 |
| MS.gene53276.t1 | AT1G75890 | 31.295 | 278 | 157 | 10 | 2 | 251 | 36 | 307 | 3.47e-29 | 113 |
| MS.gene53276.t1 | AT1G20130 | 32.950 | 261 | 143 | 9 | 7 | 237 | 198 | 456 | 4.95e-29 | 115 |
| MS.gene53276.t1 | AT1G75890 | 31.295 | 278 | 157 | 10 | 2 | 251 | 65 | 336 | 4.96e-29 | 113 |
| MS.gene53276.t1 | AT1G71691 | 34.742 | 213 | 109 | 6 | 63 | 251 | 4 | 210 | 2.10e-28 | 109 |
| MS.gene53276.t1 | AT1G73610 | 33.459 | 266 | 149 | 10 | 11 | 253 | 33 | 293 | 2.31e-28 | 110 |
| MS.gene53276.t1 | AT5G41890 | 45.638 | 149 | 70 | 5 | 15 | 156 | 33 | 177 | 3.37e-28 | 110 |
| MS.gene53276.t1 | AT3G04290 | 30.712 | 267 | 157 | 6 | 14 | 255 | 30 | 293 | 4.20e-28 | 110 |
| MS.gene53276.t1 | AT5G03820 | 31.698 | 265 | 146 | 8 | 11 | 246 | 31 | 289 | 5.01e-28 | 110 |
| MS.gene53276.t1 | AT5G42170 | 30.370 | 270 | 162 | 9 | 4 | 251 | 41 | 306 | 5.28e-28 | 110 |
| MS.gene53276.t1 | AT5G03820 | 31.698 | 265 | 146 | 8 | 11 | 246 | 59 | 317 | 1.25e-27 | 109 |
| MS.gene53276.t1 | AT5G18430 | 36.872 | 179 | 104 | 4 | 14 | 187 | 29 | 203 | 1.90e-27 | 108 |
| MS.gene53276.t1 | AT5G33370 | 29.740 | 269 | 157 | 7 | 13 | 254 | 30 | 293 | 4.37e-27 | 107 |
| MS.gene53276.t1 | AT1G20132 | 30.370 | 270 | 155 | 9 | 9 | 251 | 57 | 320 | 5.26e-27 | 107 |
| MS.gene53276.t1 | AT5G33370 | 29.740 | 269 | 157 | 7 | 14 | 255 | 31 | 294 | 1.06e-26 | 106 |
| MS.gene53276.t1 | AT1G20120 | 30.451 | 266 | 154 | 8 | 12 | 251 | 77 | 337 | 1.10e-26 | 107 |
| MS.gene53276.t1 | AT1G75890 | 30.000 | 290 | 158 | 10 | 2 | 251 | 36 | 320 | 1.55e-26 | 106 |
| MS.gene53276.t1 | AT3G53100 | 30.769 | 273 | 148 | 10 | 5 | 246 | 21 | 283 | 1.82e-26 | 105 |
| MS.gene53276.t1 | AT1G74460 | 33.708 | 267 | 139 | 10 | 15 | 251 | 25 | 283 | 5.22e-26 | 104 |
| MS.gene53276.t1 | AT1G75880 | 29.137 | 278 | 163 | 8 | 2 | 251 | 41 | 312 | 7.24e-26 | 104 |
| MS.gene53276.t1 | AT1G75880 | 29.137 | 278 | 162 | 9 | 2 | 251 | 41 | 311 | 7.30e-26 | 104 |
| MS.gene53276.t1 | AT2G03980 | 29.845 | 258 | 141 | 11 | 8 | 237 | 38 | 283 | 1.36e-25 | 103 |
| MS.gene53276.t1 | AT2G03980 | 29.845 | 258 | 141 | 11 | 8 | 237 | 38 | 283 | 1.36e-25 | 103 |
| MS.gene53276.t1 | AT2G03980 | 29.845 | 258 | 141 | 11 | 8 | 237 | 38 | 283 | 1.36e-25 | 103 |
| MS.gene53276.t1 | AT2G03980 | 29.845 | 258 | 141 | 11 | 8 | 237 | 38 | 283 | 1.36e-25 | 103 |
| MS.gene53276.t1 | AT1G75900 | 28.881 | 277 | 159 | 9 | 4 | 251 | 34 | 301 | 3.04e-25 | 102 |
| MS.gene53276.t1 | AT1G75920 | 32.103 | 271 | 151 | 10 | 9 | 251 | 25 | 290 | 3.35e-25 | 102 |
| MS.gene53276.t1 | AT2G04570 | 30.855 | 269 | 153 | 10 | 10 | 251 | 25 | 287 | 5.65e-25 | 101 |
| MS.gene53276.t1 | AT3G43550 | 28.782 | 271 | 165 | 10 | 4 | 251 | 21 | 286 | 5.90e-25 | 100 |
| MS.gene53276.t1 | AT1G20135 | 30.651 | 261 | 149 | 10 | 17 | 251 | 33 | 287 | 6.83e-25 | 101 |
| MS.gene53276.t1 | AT1G59406 | 29.259 | 270 | 163 | 10 | 5 | 251 | 22 | 286 | 8.29e-25 | 101 |
| MS.gene53276.t1 | AT1G59030 | 29.259 | 270 | 163 | 10 | 5 | 251 | 22 | 286 | 8.29e-25 | 101 |
| MS.gene53276.t1 | AT1G58725 | 29.259 | 270 | 163 | 10 | 5 | 251 | 22 | 286 | 8.29e-25 | 101 |
| MS.gene53276.t1 | AT5G03810 | 30.855 | 269 | 152 | 9 | 11 | 251 | 28 | 290 | 9.88e-25 | 101 |
| MS.gene53276.t1 | AT4G28780 | 29.537 | 281 | 166 | 9 | 1 | 255 | 21 | 295 | 1.17e-24 | 101 |
| MS.gene53276.t1 | AT5G63170 | 29.818 | 275 | 148 | 10 | 11 | 253 | 26 | 287 | 4.79e-24 | 99.0 |
| MS.gene53276.t1 | AT1G58520 | 29.434 | 265 | 159 | 10 | 11 | 252 | 28 | 287 | 9.59e-24 | 98.2 |
| MS.gene53276.t1 | AT1G58525 | 29.434 | 265 | 159 | 10 | 11 | 252 | 28 | 287 | 9.59e-24 | 98.2 |
| MS.gene53276.t1 | AT3G16370 | 30.996 | 271 | 154 | 9 | 8 | 251 | 25 | 289 | 9.67e-24 | 98.6 |
| MS.gene53276.t1 | AT2G04020 | 36.216 | 185 | 105 | 5 | 8 | 188 | 38 | 213 | 1.64e-23 | 96.3 |
| MS.gene53276.t1 | AT5G55050 | 27.636 | 275 | 157 | 9 | 11 | 251 | 37 | 303 | 2.96e-23 | 97.4 |
| MS.gene53276.t1 | AT2G04020 | 36.216 | 185 | 105 | 5 | 8 | 188 | 38 | 213 | 5.41e-23 | 95.9 |
| MS.gene53276.t1 | AT2G42990 | 30.682 | 264 | 150 | 10 | 8 | 244 | 23 | 280 | 1.51e-22 | 95.1 |
| MS.gene53276.t1 | AT1G23500 | 32.584 | 267 | 151 | 10 | 11 | 253 | 33 | 294 | 1.87e-22 | 94.7 |
| MS.gene53276.t1 | AT1G75930 | 31.818 | 264 | 149 | 10 | 15 | 251 | 31 | 290 | 8.45e-22 | 93.2 |
| MS.gene53276.t1 | AT2G31540 | 28.889 | 270 | 156 | 10 | 12 | 251 | 34 | 297 | 1.90e-21 | 92.4 |
| MS.gene53276.t1 | AT1G75920 | 30.420 | 286 | 151 | 11 | 9 | 251 | 20 | 300 | 2.01e-21 | 92.0 |
| MS.gene53276.t1 | AT4G16220 | 47.826 | 115 | 56 | 3 | 8 | 119 | 25 | 138 | 3.33e-21 | 89.7 |
| MS.gene53276.t1 | AT3G43570 | 33.333 | 159 | 100 | 5 | 4 | 159 | 21 | 176 | 8.25e-21 | 90.1 |
| MS.gene53276.t1 | AT2G40250 | 26.838 | 272 | 163 | 10 | 11 | 251 | 34 | 300 | 8.29e-21 | 90.5 |
| MS.gene53276.t1 | AT1G75910 | 30.712 | 267 | 155 | 9 | 12 | 251 | 27 | 290 | 1.24e-20 | 89.7 |
| MS.gene53276.t1 | AT4G26790 | 27.341 | 267 | 165 | 9 | 10 | 251 | 26 | 288 | 5.13e-20 | 88.2 |
| MS.gene53276.t1 | AT4G26790 | 27.341 | 267 | 165 | 9 | 10 | 251 | 26 | 288 | 5.13e-20 | 88.2 |
| MS.gene53276.t1 | AT1G58430 | 26.667 | 270 | 162 | 10 | 12 | 251 | 34 | 297 | 1.12e-19 | 87.4 |
| MS.gene53276.t1 | AT2G24560 | 26.667 | 270 | 162 | 10 | 12 | 251 | 33 | 296 | 4.07e-19 | 85.1 |
| MS.gene53276.t1 | AT2G24560 | 26.667 | 270 | 162 | 10 | 12 | 251 | 33 | 296 | 7.78e-19 | 85.1 |
| MS.gene53276.t1 | AT1G06990 | 28.148 | 270 | 157 | 9 | 12 | 251 | 36 | 298 | 1.44e-18 | 84.3 |
| MS.gene53276.t1 | AT2G30220 | 26.119 | 268 | 166 | 9 | 12 | 251 | 32 | 295 | 6.88e-18 | 82.4 |
| MS.gene53276.t1 | AT5G45960 | 26.071 | 280 | 159 | 10 | 9 | 251 | 43 | 311 | 2.03e-17 | 81.3 |
| MS.gene53276.t1 | AT2G30310 | 25.185 | 270 | 166 | 10 | 12 | 251 | 33 | 296 | 8.44e-17 | 79.3 |
| MS.gene53276.t1 | AT5G40990 | 33.673 | 196 | 106 | 8 | 14 | 205 | 38 | 213 | 2.32e-16 | 78.2 |
| MS.gene53276.t1 | AT1G75920 | 28.625 | 269 | 132 | 10 | 9 | 251 | 25 | 259 | 1.06e-15 | 75.5 |
| MS.gene53276.t1 | AT1G53920 | 35.404 | 161 | 83 | 8 | 11 | 162 | 46 | 194 | 2.13e-15 | 75.5 |
| MS.gene53276.t1 | AT3G14225 | 28.685 | 251 | 147 | 10 | 15 | 239 | 39 | 283 | 2.49e-15 | 75.1 |
| MS.gene53276.t1 | AT3G14225 | 28.854 | 253 | 148 | 10 | 15 | 239 | 39 | 287 | 7.78e-15 | 73.6 |
| MS.gene53276.t1 | AT1G75920 | 30.041 | 243 | 137 | 10 | 37 | 251 | 25 | 262 | 1.34e-14 | 72.4 |
| MS.gene53276.t1 | AT5G45950 | 31.429 | 175 | 109 | 7 | 9 | 179 | 36 | 203 | 1.26e-13 | 70.1 |
| MS.gene53276.t1 | AT1G53940 | 31.282 | 195 | 108 | 8 | 14 | 203 | 40 | 213 | 1.53e-13 | 69.3 |
| MS.gene53276.t1 | AT1G71120 | 28.854 | 253 | 136 | 9 | 11 | 233 | 29 | 267 | 1.73e-13 | 69.7 |
| MS.gene53276.t1 | AT1G53940 | 31.282 | 195 | 108 | 8 | 14 | 203 | 40 | 213 | 2.27e-13 | 69.3 |
| MS.gene53276.t1 | AT3G09930 | 40.187 | 107 | 57 | 3 | 14 | 118 | 40 | 141 | 4.08e-13 | 68.6 |
| MS.gene53276.t1 | AT3G09930 | 40.187 | 107 | 57 | 3 | 14 | 118 | 40 | 141 | 4.08e-13 | 68.6 |
| MS.gene53276.t1 | AT1G28570 | 24.126 | 286 | 173 | 10 | 5 | 253 | 26 | 304 | 5.44e-13 | 68.6 |
| MS.gene53276.t1 | AT1G28590 | 25.573 | 262 | 147 | 10 | 17 | 239 | 40 | 292 | 1.08e-12 | 67.4 |
| MS.gene53276.t1 | AT2G27360 | 31.356 | 118 | 71 | 4 | 17 | 125 | 37 | 153 | 6.36e-11 | 62.4 |
| MS.gene53276.t1 | AT1G31550 | 30.822 | 146 | 89 | 4 | 17 | 154 | 40 | 181 | 6.62e-11 | 62.4 |
| MS.gene53276.t1 | AT1G31550 | 30.822 | 146 | 89 | 4 | 17 | 154 | 40 | 181 | 6.85e-11 | 62.0 |
Find 64 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCCATGTTTCTTCATATT+TGG | 0.151987 | 3.2:-472706 | MS.gene53276:CDS |
| AAACCCCTTGCTCTTGAATT+TGG | 0.162052 | 3.2:+472209 | None:intergenic |
| AGCAAATGCATATATTATTC+AGG | 0.228493 | 3.2:-471902 | MS.gene53276:CDS |
| TATAATTGCAGCTCAACTTT+TGG | 0.269085 | 3.2:-472252 | MS.gene53276:intron |
| TATGAATTAGCACGTATTAA+TGG | 0.270158 | 3.2:-471177 | MS.gene53276:intron |
| GGCGACTCATTGGTTGATAA+TGG | 0.292013 | 3.2:-472685 | MS.gene53276:CDS |
| AGTGCAGATCTAGCATTAAA+TGG | 0.346283 | 3.2:-471018 | MS.gene53276:CDS |
| TATCAATGGAGGGCAGCTTC+CGG | 0.349478 | 3.2:-471076 | MS.gene53276:CDS |
| ATCAATGGAGGGCAGCTTCC+GGG | 0.356171 | 3.2:-471075 | MS.gene53276:CDS |
| CGAACCTTCGTCGATGCATT+AGG | 0.365692 | 3.2:-472568 | MS.gene53276:intron |
| AGGGCTAATTATCGACCTTA+TGG | 0.366890 | 3.2:-472634 | MS.gene53276:CDS |
| CAGTCATGAAATAGTTGTTC+AGG | 0.377347 | 3.2:+471861 | None:intergenic |
| CCCCTTGCTCTTGAATTTGG+AGG | 0.378814 | 3.2:+472212 | None:intergenic |
| CTTCATATTTGGCGACTCAT+TGG | 0.380484 | 3.2:-472695 | MS.gene53276:CDS |
| AGGGCAGATGCAAAAGCTTT+AGG | 0.387451 | 3.2:+471809 | None:intergenic |
| AAATTCAAGAGCAAGGGGTT+TGG | 0.392526 | 3.2:-472207 | MS.gene53276:CDS |
| TGCATATATTATTCAGGGTT+GGG | 0.404381 | 3.2:-471896 | MS.gene53276:CDS |
| AGCATTAAATGGAAAATCAA+TGG | 0.419825 | 3.2:-471007 | MS.gene53276:CDS |
| AGAGGAGTCAATTATGCATC+TGG | 0.423551 | 3.2:-472176 | MS.gene53276:CDS |
| TTAATTTACTCACAGATAGT+TGG | 0.426379 | 3.2:+471768 | None:intergenic |
| CAAATGAGAAGGTTCTTTAG+AGG | 0.429552 | 3.2:-471953 | MS.gene53276:CDS |
| AATTAGCCCTAGCAAGTGTT+AGG | 0.433591 | 3.2:+472647 | None:intergenic |
| TAAGACCTGAGTTAAAATAC+TGG | 0.436936 | 3.2:+471115 | None:intergenic |
| GCAGGCATCAGAGAGGAAAC+AGG | 0.442089 | 3.2:-472149 | MS.gene53276:CDS |
| AGGGGTTTGGACCTTCTTAG+AGG | 0.442660 | 3.2:-472194 | MS.gene53276:CDS |
| ACTGAGCAAGTGACAAACTT+TGG | 0.446748 | 3.2:-471989 | MS.gene53276:CDS |
| ATGCATATATTATTCAGGGT+TGG | 0.453650 | 3.2:-471897 | MS.gene53276:CDS |
| GTTAATCTTCTCATTGCATC+CGG | 0.456244 | 3.2:+471146 | None:intergenic |
| AATAATATATGCATTTGCTT+AGG | 0.472093 | 3.2:+471906 | None:intergenic |
| GCAAATGCATATATTATTCA+GGG | 0.476578 | 3.2:-471901 | MS.gene53276:CDS |
| ATCGACGAAGGTTCGACCAT+TGG | 0.483856 | 3.2:+472576 | None:intergenic |
| CATGGCACTTGTTGTCCCTC+CGG | 0.494961 | 3.2:+472721 | None:intergenic |
| TCCTCCAAATTCAAGAGCAA+GGG | 0.502054 | 3.2:-472213 | MS.gene53276:CDS |
| GCATTAAATGGAAAATCAAT+GGG | 0.502185 | 3.2:-471006 | MS.gene53276:CDS |
| AATTATGCATCTGGAGCAGC+AGG | 0.508819 | 3.2:-472167 | MS.gene53276:CDS |
| CAATTAGTTCAGAATATCAA+TGG | 0.510533 | 3.2:-471090 | MS.gene53276:CDS |
| ATGGGATCCTAACACTTGCT+AGG | 0.512016 | 3.2:-472654 | MS.gene53276:CDS |
| TGTGGGAAGTCGATGCCATA+AGG | 0.521963 | 3.2:+472619 | None:intergenic |
| TTCCTCCAAATTCAAGAGCA+AGG | 0.526404 | 3.2:-472214 | MS.gene53276:CDS |
| CATAATTGACTCCTCTAAGA+AGG | 0.526704 | 3.2:+472183 | None:intergenic |
| AAGCGACCGGTGGGACCTTG+TGG | 0.527657 | 3.2:+472601 | None:intergenic |
| TTGATAATGGAAACAACAAT+GGG | 0.532524 | 3.2:-472672 | MS.gene53276:CDS |
| GGCGAGCGTAGTCTTGAAGA+AGG | 0.538225 | 3.2:+471789 | None:intergenic |
| GTTGATAATGGAAACAACAA+TGG | 0.544775 | 3.2:-472673 | MS.gene53276:CDS |
| AGCGACCGGTGGGACCTTGT+GGG | 0.545059 | 3.2:+472602 | None:intergenic |
| TGTTGTCCCTCCGGTTGCCG+TGG | 0.548026 | 3.2:+472730 | None:intergenic |
| TCGACCATTGGTGAAGCGAC+CGG | 0.554522 | 3.2:+472588 | None:intergenic |
| GACTTCCCACAAGGTCCCAC+CGG | 0.565595 | 3.2:-472607 | MS.gene53276:CDS |
| CGTATTAATGGTAACATCAC+CGG | 0.574338 | 3.2:-471165 | MS.gene53276:CDS |
| CCCACCGGTCGCTTCACCAA+TGG | 0.577167 | 3.2:-472592 | MS.gene53276:CDS |
| AGAGGAAACAGGCAGTAACC+TGG | 0.589288 | 3.2:-472138 | MS.gene53276:intron |
| CCTCCAAATTCAAGAGCAAG+GGG | 0.596481 | 3.2:-472212 | MS.gene53276:CDS |
| ACCATTGGTGAAGCGACCGG+TGG | 0.597222 | 3.2:+472591 | None:intergenic |
| ACCTGAGTTAAAATACTGGA+TGG | 0.601483 | 3.2:+471119 | None:intergenic |
| TGGGATCCTAACACTTGCTA+GGG | 0.606593 | 3.2:-472653 | MS.gene53276:CDS |
| TTAGTTCAGAATATCAATGG+AGG | 0.620340 | 3.2:-471087 | MS.gene53276:CDS |
| ACACAGTGCAACAAATGAGA+AGG | 0.629161 | 3.2:-471964 | MS.gene53276:CDS |
| ATTACCTAATGCATCGACGA+AGG | 0.630153 | 3.2:+472564 | None:intergenic |
| TAGTTCAGAATATCAATGGA+GGG | 0.636717 | 3.2:-471086 | MS.gene53276:CDS |
| TCGCCAAATATGAAGAAACA+TGG | 0.643194 | 3.2:+472703 | None:intergenic |
| GCGAGCGTAGTCTTGAAGAA+GGG | 0.654662 | 3.2:+471790 | None:intergenic |
| TATGGCATCGACTTCCCACA+AGG | 0.673822 | 3.2:-472616 | MS.gene53276:CDS |
| CCATTGGTGAAGCGACCGGT+GGG | 0.674337 | 3.2:+472592 | None:intergenic |
| TGGAGCAGCAGGCATCAGAG+AGG | 0.700418 | 3.2:-472156 | MS.gene53276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTATATTGAAATATTAAA+TGG | - | chr3.2:472294-472313 | MS.gene53276:intron | 10.0% |
| !!! | TATATAGATTTTAATTACAA+TGG | - | chr3.2:471189-471208 | MS.gene53276:intron | 10.0% |
| !! | TAAATAAATTCTCTTATAAG+TGG | - | chr3.2:471265-471284 | MS.gene53276:intron | 15.0% |
| !!! | TTTTGAATCATTCTTTAAAT+CGG | + | chr3.2:471380-471399 | None:intergenic | 15.0% |
| !! | AATAATATATGCATTTGCTT+AGG | + | chr3.2:471817-471836 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTTTTATGTATGC+AGG | - | chr3.2:471691-471710 | MS.gene53276:intron | 20.0% |
| !!! | TACAATTTTATCTATCTTCT+AGG | - | chr3.2:472737-472756 | MS.gene53276:CDS | 20.0% |
| !!! | TTTTCTTTTTTATGTATGCA+GGG | - | chr3.2:471692-471711 | MS.gene53276:intron | 20.0% |
| ! | AAATGGTATGAATGAGTTAA+CGG | - | chr3.2:472311-472330 | MS.gene53276:intron | 25.0% |
| ! | AAGAATATATATGCAATACC+AGG | + | chr3.2:471603-471622 | None:intergenic | 25.0% |
| ! | AGCAAATGCATATATTATTC+AGG | - | chr3.2:471818-471837 | MS.gene53276:CDS | 25.0% |
| ! | AGCATTAAATGGAAAATCAA+TGG | - | chr3.2:472713-472732 | MS.gene53276:CDS | 25.0% |
| ! | ATTGAATCTACATATATAGC+TGG | - | chr3.2:471997-472016 | MS.gene53276:CDS | 25.0% |
| ! | CAATTAGTTCAGAATATCAA+TGG | - | chr3.2:472630-472649 | MS.gene53276:CDS | 25.0% |
| ! | GCAAATGCATATATTATTCA+GGG | - | chr3.2:471819-471838 | MS.gene53276:CDS | 25.0% |
| ! | GCATTAAATGGAAAATCAAT+GGG | - | chr3.2:472714-472733 | MS.gene53276:CDS | 25.0% |
| ! | GCTATATATGTAGATTCAAT+TGG | + | chr3.2:471997-472016 | None:intergenic | 25.0% |
| ! | TATGAATTAGCACGTATTAA+TGG | - | chr3.2:472543-472562 | MS.gene53276:intron | 25.0% |
| ! | TTAATACGTGCTAATTCATA+TGG | + | chr3.2:472543-472562 | None:intergenic | 25.0% |
| ! | TTAATTTACTCACAGATAGT+TGG | + | chr3.2:471955-471974 | None:intergenic | 25.0% |
| !!! | AATCATTTGTTTCTAACGTT+AGG | - | chr3.2:471352-471371 | MS.gene53276:intron | 25.0% |
| !!! | ATCATTTGTTTCTAACGTTA+GGG | - | chr3.2:471353-471372 | MS.gene53276:intron | 25.0% |
| !!! | TTGATAATGGAAACAACAAT+GGG | - | chr3.2:471048-471067 | MS.gene53276:CDS | 25.0% |
| !!! | TTTCTTTTTTATGTATGCAG+GGG | - | chr3.2:471693-471712 | MS.gene53276:intron | 25.0% |
| AGCACACATTAATTCAACAT+TGG | - | chr3.2:471631-471650 | MS.gene53276:intron | 30.0% | |
| ATGCATATATTATTCAGGGT+TGG | - | chr3.2:471823-471842 | MS.gene53276:CDS | 30.0% | |
| CCTAATCATAAAATAGAAGC+CGG | - | chr3.2:471311-471330 | MS.gene53276:intron | 30.0% | |
| CTAATCATAAAATAGAAGCC+GGG | - | chr3.2:471312-471331 | MS.gene53276:intron | 30.0% | |
| CTACATATATAGCTGGATAA+TGG | - | chr3.2:472004-472023 | MS.gene53276:CDS | 30.0% | |
| TAAGACCTGAGTTAAAATAC+TGG | + | chr3.2:472608-472627 | None:intergenic | 30.0% | |
| TAATCATAAAATAGAAGCCG+GGG | - | chr3.2:471313-471332 | MS.gene53276:intron | 30.0% | |
| TAGTTCAGAATATCAATGGA+GGG | - | chr3.2:472634-472653 | MS.gene53276:CDS | 30.0% | |
| TATCTGGTCAGTTAATTCAT+AGG | + | chr3.2:472363-472382 | None:intergenic | 30.0% | |
| TCCAGCAATTACATTCATTA+GGG | - | chr3.2:472472-472491 | MS.gene53276:intron | 30.0% | |
| TCTCAAATGGGATAAAAAAG+TGG | - | chr3.2:472229-472248 | MS.gene53276:CDS | 30.0% | |
| TGCATATATTATTCAGGGTT+GGG | - | chr3.2:471824-471843 | MS.gene53276:CDS | 30.0% | |
| TTAGTTCAGAATATCAATGG+AGG | - | chr3.2:472633-472652 | MS.gene53276:CDS | 30.0% | |
| TTATTGAACAGTGTATGTTG+AGG | - | chr3.2:472037-472056 | MS.gene53276:intron | 30.0% | |
| ! | ATAATTGCAGCTCAACTTTT+GGG | - | chr3.2:471469-471488 | MS.gene53276:intron | 30.0% |
| ! | TATAATTGCAGCTCAACTTT+TGG | - | chr3.2:471468-471487 | MS.gene53276:intron | 30.0% |
| !! | GTTGATAATGGAAACAACAA+TGG | - | chr3.2:471047-471066 | MS.gene53276:CDS | 30.0% |
| !!! | TTCTTTTTTATGTATGCAGG+GGG | - | chr3.2:471694-471713 | MS.gene53276:intron | 30.0% |
| AAAAACACAAACTTTGCTCC+CGG | + | chr3.2:472666-472685 | None:intergenic | 35.0% | |
| ACCTGAGTTAAAATACTGGA+TGG | + | chr3.2:472604-472623 | None:intergenic | 35.0% | |
| AGTGCAGATCTAGCATTAAA+TGG | - | chr3.2:472702-472721 | MS.gene53276:CDS | 35.0% | |
| ATGTGACTAAGAGTCTCAAA+TGG | - | chr3.2:472216-472235 | MS.gene53276:CDS | 35.0% | |
| CAAATGAGAAGGTTCTTTAG+AGG | - | chr3.2:471767-471786 | MS.gene53276:intron | 35.0% | |
| CAGTCATGAAATAGTTGTTC+AGG | + | chr3.2:471862-471881 | None:intergenic | 35.0% | |
| CCAGCAATTACATTCATTAG+GGG | - | chr3.2:472473-472492 | MS.gene53276:intron | 35.0% | |
| CGTATTAATGGTAACATCAC+CGG | - | chr3.2:472555-472574 | MS.gene53276:intron | 35.0% | |
| GAGTTAACGGTTGAGTTATT+TGG | - | chr3.2:472324-472343 | MS.gene53276:intron | 35.0% | |
| GTCCAGCAATTACATTCATT+AGG | - | chr3.2:472471-472490 | MS.gene53276:intron | 35.0% | |
| GTGCCATGTTTCTTCATATT+TGG | - | chr3.2:471014-471033 | MS.gene53276:CDS | 35.0% | |
| GTTAATCTTCTCATTGCATC+CGG | + | chr3.2:472577-472596 | None:intergenic | 35.0% | |
| TCGCCAAATATGAAGAAACA+TGG | + | chr3.2:471020-471039 | None:intergenic | 35.0% | |
| TGTGACTAAGAGTCTCAAAT+GGG | - | chr3.2:472217-472236 | MS.gene53276:CDS | 35.0% | |
| TTACAGCAGTTGGTCAAATT+GGG | - | chr3.2:472511-472530 | MS.gene53276:intron | 35.0% | |
| ! | CATAATTGACTCCTCTAAGA+AGG | + | chr3.2:471540-471559 | None:intergenic | 35.0% |
| ! | CCGGCTTCTATTTTATGATT+AGG | + | chr3.2:471314-471333 | None:intergenic | 35.0% |
| AAACCCCTTGCTCTTGAATT+TGG | + | chr3.2:471514-471533 | None:intergenic | 40.0% | |
| AAAGTGATCGTTACAGCAGT+TGG | - | chr3.2:472501-472520 | MS.gene53276:intron | 40.0% | |
| AAATTCAAGAGCAAGGGGTT+TGG | - | chr3.2:471513-471532 | MS.gene53276:intron | 40.0% | |
| AATTAGCCCTAGCAAGTGTT+AGG | + | chr3.2:471076-471095 | None:intergenic | 40.0% | |
| ACACAGTGCAACAAATGAGA+AGG | - | chr3.2:471756-471775 | MS.gene53276:intron | 40.0% | |
| ACTGAGCAAGTGACAAACTT+TGG | - | chr3.2:471731-471750 | MS.gene53276:intron | 40.0% | |
| AGAGGAGTCAATTATGCATC+TGG | - | chr3.2:471544-471563 | MS.gene53276:intron | 40.0% | |
| AGGGCTAATTATCGACCTTA+TGG | - | chr3.2:471086-471105 | MS.gene53276:CDS | 40.0% | |
| CCCCTAATGAATGTAATTGC+TGG | + | chr3.2:472476-472495 | None:intergenic | 40.0% | |
| CTTCATATTTGGCGACTCAT+TGG | - | chr3.2:471025-471044 | MS.gene53276:CDS | 40.0% | |
| GTTACAGCAGTTGGTCAAAT+TGG | - | chr3.2:472510-472529 | MS.gene53276:intron | 40.0% | |
| TAACTGACCAGATAACTCCT+CGG | - | chr3.2:472369-472388 | MS.gene53276:intron | 40.0% | |
| TCCTCCAAATTCAAGAGCAA+GGG | - | chr3.2:471507-471526 | MS.gene53276:intron | 40.0% | |
| TTCCTCCAAATTCAAGAGCA+AGG | - | chr3.2:471506-471525 | MS.gene53276:intron | 40.0% | |
| ! | ATTACCTAATGCATCGACGA+AGG | + | chr3.2:471159-471178 | None:intergenic | 40.0% |
| ! | GGGAGCAAAGTTTGTGTTTT+TGG | - | chr3.2:472665-472684 | MS.gene53276:CDS | 40.0% |
| !!! | GCCATCCAGTATTTTAACTC+AGG | - | chr3.2:472600-472619 | MS.gene53276:CDS | 40.0% |
| AGGGCAGATGCAAAAGCTTT+AGG | + | chr3.2:471914-471933 | None:intergenic | 45.0% | |
| ATGGGATCCTAACACTTGCT+AGG | - | chr3.2:471066-471085 | MS.gene53276:CDS | 45.0% | |
| CCTCCAAATTCAAGAGCAAG+GGG | - | chr3.2:471508-471527 | MS.gene53276:intron | 45.0% | |
| TTAGCCGCATTATAGTTCCC+CGG | + | chr3.2:471333-471352 | None:intergenic | 45.0% | |
| ! | AATTATGCATCTGGAGCAGC+AGG | - | chr3.2:471553-471572 | MS.gene53276:intron | 45.0% |
| ! | TGGGATCCTAACACTTGCTA+GGG | - | chr3.2:471067-471086 | MS.gene53276:CDS | 45.0% |
| !! | GGCGACTCATTGGTTGATAA+TGG | - | chr3.2:471035-471054 | MS.gene53276:CDS | 45.0% |
| AACTAAGTAACCGCCAACCG+AGG | + | chr3.2:472389-472408 | None:intergenic | 50.0% | |
| AGAGGAAACAGGCAGTAACC+TGG | - | chr3.2:471582-471601 | MS.gene53276:intron | 50.0% | |
| AGGGGTTTGGACCTTCTTAG+AGG | - | chr3.2:471526-471545 | MS.gene53276:intron | 50.0% | |
| ATCGACGAAGGTTCGACCAT+TGG | + | chr3.2:471147-471166 | None:intergenic | 50.0% | |
| CCCCTTGCTCTTGAATTTGG+AGG | + | chr3.2:471511-471530 | None:intergenic | 50.0% | |
| CGAACCTTCGTCGATGCATT+AGG | - | chr3.2:471152-471171 | MS.gene53276:CDS | 50.0% | |
| GAAGCCGGGGAACTATAATG+CGG | - | chr3.2:471326-471345 | MS.gene53276:intron | 50.0% | |
| TATCAATGGAGGGCAGCTTC+CGG | - | chr3.2:472644-472663 | MS.gene53276:CDS | 50.0% | |
| TGACCAGATAACTCCTCGGT+TGG | - | chr3.2:472373-472392 | MS.gene53276:intron | 50.0% | |
| TGTGGGAAGTCGATGCCATA+AGG | + | chr3.2:471104-471123 | None:intergenic | 50.0% | |
| ! | GCGAGCGTAGTCTTGAAGAA+GGG | + | chr3.2:471933-471952 | None:intergenic | 50.0% |
| !! | TATGGCATCGACTTCCCACA+AGG | - | chr3.2:471104-471123 | MS.gene53276:CDS | 50.0% |
| ATCAATGGAGGGCAGCTTCC+GGG | - | chr3.2:472645-472664 | MS.gene53276:CDS | 55.0% | |
| CCAGATAACTCCTCGGTTGG+CGG | - | chr3.2:472376-472395 | MS.gene53276:intron | 55.0% | |
| GCAGGCATCAGAGAGGAAAC+AGG | - | chr3.2:471571-471590 | MS.gene53276:intron | 55.0% | |
| TCGACCATTGGTGAAGCGAC+CGG | + | chr3.2:471135-471154 | None:intergenic | 55.0% | |
| ! | GGCGAGCGTAGTCTTGAAGA+AGG | + | chr3.2:471934-471953 | None:intergenic | 55.0% |
| !! | CATGGCACTTGTTGTCCCTC+CGG | + | chr3.2:471002-471021 | None:intergenic | 55.0% |
| ACCATTGGTGAAGCGACCGG+TGG | + | chr3.2:471132-471151 | None:intergenic | 60.0% | |
| CCATTGGTGAAGCGACCGGT+GGG | + | chr3.2:471131-471150 | None:intergenic | 60.0% | |
| CCGCCAACCGAGGAGTTATC+TGG | + | chr3.2:472379-472398 | None:intergenic | 60.0% | |
| GACTTCCCACAAGGTCCCAC+CGG | - | chr3.2:471113-471132 | MS.gene53276:CDS | 60.0% | |
| TGGAGCAGCAGGCATCAGAG+AGG | - | chr3.2:471564-471583 | MS.gene53276:intron | 60.0% | |
| ! | GTTTTGCCACGGCAACCGGA+GGG | - | chr3.2:470984-471003 | MS.gene53276:CDS | 60.0% |
| AAGCGACCGGTGGGACCTTG+TGG | + | chr3.2:471122-471141 | None:intergenic | 65.0% | |
| AGCGACCGGTGGGACCTTGT+GGG | + | chr3.2:471121-471140 | None:intergenic | 65.0% | |
| CCCACCGGTCGCTTCACCAA+TGG | - | chr3.2:471128-471147 | MS.gene53276:CDS | 65.0% | |
| TGTTGTCCCTCCGGTTGCCG+TGG | + | chr3.2:470993-471012 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 470984 | 472758 | 470984 | ID=MS.gene53276 |
| chr3.2 | mRNA | 470984 | 472758 | 470984 | ID=MS.gene53276.t1;Parent=MS.gene53276 |
| chr3.2 | exon | 472569 | 472758 | 472569 | ID=MS.gene53276.t1.exon1;Parent=MS.gene53276.t1 |
| chr3.2 | CDS | 472569 | 472758 | 472569 | ID=cds.MS.gene53276.t1;Parent=MS.gene53276.t1 |
| chr3.2 | exon | 472139 | 472263 | 472139 | ID=MS.gene53276.t1.exon2;Parent=MS.gene53276.t1 |
| chr3.2 | CDS | 472139 | 472263 | 472139 | ID=cds.MS.gene53276.t1;Parent=MS.gene53276.t1 |
| chr3.2 | exon | 471777 | 472029 | 471777 | ID=MS.gene53276.t1.exon3;Parent=MS.gene53276.t1 |
| chr3.2 | CDS | 471777 | 472029 | 471777 | ID=cds.MS.gene53276.t1;Parent=MS.gene53276.t1 |
| chr3.2 | exon | 470984 | 471189 | 470984 | ID=MS.gene53276.t1.exon4;Parent=MS.gene53276.t1 |
| chr3.2 | CDS | 470984 | 471189 | 470984 | ID=cds.MS.gene53276.t1;Parent=MS.gene53276.t1 |
| Gene Sequence |
| Protein sequence |
