Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55282.t1 | XP_003613882.1 | 98.8 | 165 | 2 | 0 | 1 | 165 | 1 | 165 | 1.80E-86 | 328.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55282.t1 | Q5M9I6 | 45.5 | 134 | 62 | 4 | 1 | 133 | 1 | 124 | 2.3e-21 | 104.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55282.t1 | G7JWG8 | 98.8 | 165 | 2 | 0 | 1 | 165 | 1 | 165 | 1.3e-86 | 328.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049857 | MS.gene55282 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene55282 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene55282 | 0.834468 | 2.95E-56 | -1.69E-46 |
| MS.gene050752 | MS.gene55282 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene55282 | 0.829407 | 5.24E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene55282 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene051233 | MS.gene55282 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene55282 | 0.828605 | 8.19E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene55282 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene051748 | MS.gene55282 | 0.820729 | 5.88E-53 | -1.69E-46 |
| MS.gene051756 | MS.gene55282 | 0.822685 | 2.08E-53 | -1.69E-46 |
| MS.gene051903 | MS.gene55282 | 0.810591 | 1.07E-50 | -1.69E-46 |
| MS.gene051987 | MS.gene55282 | 0.805057 | 1.60E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene55282 | 0.819988 | 8.70E-53 | -1.69E-46 |
| MS.gene053058 | MS.gene55282 | 0.852924 | 3.35E-61 | -1.69E-46 |
| MS.gene053109 | MS.gene55282 | 0.813681 | 2.26E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene55282 | 0.820944 | 5.25E-53 | -1.69E-46 |
| MS.gene053381 | MS.gene55282 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene55282 | -0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene55282 | 0.827221 | 1.76E-54 | -1.69E-46 |
| MS.gene054403 | MS.gene55282 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene55282 | 0.801318 | 9.53E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene55282 | 0.81289 | 3.38E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene55282 | 0.817396 | 3.37E-52 | -1.69E-46 |
| MS.gene056992 | MS.gene55282 | 0.829803 | 4.19E-55 | -1.69E-46 |
| MS.gene057094 | MS.gene55282 | 0.830121 | 3.51E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene55282 | 0.834301 | 3.24E-56 | -1.69E-46 |
| MS.gene057999 | MS.gene55282 | 0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene058054 | MS.gene55282 | 0.818633 | 1.77E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene55282 | 0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene058074 | MS.gene55282 | 0.840621 | 7.79E-58 | -1.69E-46 |
| MS.gene058238 | MS.gene55282 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene058654 | MS.gene55282 | 0.807003 | 6.25E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene55282 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene55282 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene55282 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene55282 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene55282 | 0.813012 | 3.18E-51 | -1.69E-46 |
| MS.gene060463 | MS.gene55282 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene060465 | MS.gene55282 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene060702 | MS.gene55282 | 0.818059 | 2.39E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene55282 | 0.80114 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55282.t1 | MTR_5g042160 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 5.43e-162 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55282.t1 | AT3G52220 | 65.138 | 218 | 70 | 4 | 1 | 213 | 1 | 217 | 4.94e-91 | 268 |
Find 58 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTCCATTTCTTCATTT+TGG | 0.047448 | 5.2:+31682375 | None:intergenic |
| AAAAGAGAAGACGGGAAGAA+AGG | 0.371187 | 5.2:-31679705 | MS.gene55282:CDS |
| CTCTTGCTTTCTTTCCTCAC+GGG | 0.394011 | 5.2:+31679654 | None:intergenic |
| AAAGTCCCAAAATGAAGAAA+TGG | 0.405533 | 5.2:-31682381 | MS.gene55282:CDS |
| ATGTGAGACCTTTGAGGAAC+CGG | 0.412211 | 5.2:+31679810 | None:intergenic |
| AAACACAGGGAGAATTATAT+AGG | 0.414477 | 5.2:-31683884 | MS.gene55282:CDS |
| TCAAGGCTCCTGTTGGTAGA+TGG | 0.426647 | 5.2:-31683853 | MS.gene55282:CDS |
| GAGAAGACGGGAAGAAAGGA+AGG | 0.440522 | 5.2:-31679701 | MS.gene55282:CDS |
| CCTTTCTGCCATCTACCAAC+AGG | 0.451053 | 5.2:+31683845 | None:intergenic |
| TCTCTTGCTTTCTTTCCTCA+CGG | 0.454567 | 5.2:+31679653 | None:intergenic |
| GCTGAAGCAGCAAGGGTTCA+AGG | 0.474043 | 5.2:-31682182 | MS.gene55282:CDS |
| TGTGCAGAGAACTCCGCCCT+TGG | 0.480974 | 5.2:-31679840 | MS.gene55282:intron |
| GTGCAGAGAACTCCGCCCTT+GGG | 0.482632 | 5.2:-31679839 | MS.gene55282:intron |
| GCAGCAAGGGTTCAAGGTGT+TGG | 0.487662 | 5.2:-31682176 | MS.gene55282:CDS |
| GGGTCTACAGCAGAAGACTT+AGG | 0.489361 | 5.2:-31682215 | MS.gene55282:CDS |
| GAGGAACCGGGTTCTTCCCA+AGG | 0.492669 | 5.2:+31679823 | None:intergenic |
| AATTAAGGAAGAGGAGGAGC+AGG | 0.497912 | 5.2:-31682333 | MS.gene55282:CDS |
| TTGATGGAACAGAGTTCACT+TGG | 0.500036 | 5.2:-31683925 | MS.gene55282:intron |
| AGAGGAGGAGCAGGCAATGA+GGG | 0.501735 | 5.2:-31682324 | MS.gene55282:CDS |
| AAAATTCATGTTTATCAAGA+CGG | 0.507020 | 5.2:+31682255 | None:intergenic |
| CTTGGTGATTGATTAGGCAT+AGG | 0.510323 | 5.2:+31679763 | None:intergenic |
| TGAGGACGACTAGCACGCTT+AGG | 0.512346 | 5.2:+31682284 | None:intergenic |
| CCAACTCGAGGTGGCGTCCG+TGG | 0.525837 | 5.2:-31684241 | MS.gene55282:CDS |
| AGAAAGATAAAGAGAGGAGG+AGG | 0.528808 | 5.2:-31679582 | MS.gene55282:CDS |
| TGGTGTATGTGAGACCTTTG+AGG | 0.550478 | 5.2:+31679804 | None:intergenic |
| AATGAGGGAAGCTCTCGGCT+TGG | 0.564929 | 5.2:-31682309 | MS.gene55282:CDS |
| GGAAGAACCCGGTTCCTCAA+AGG | 0.565976 | 5.2:-31679818 | MS.gene55282:CDS |
| GACACAAGAAAGATAAAGAG+AGG | 0.577049 | 5.2:-31679588 | MS.gene55282:CDS |
| AAGAGGAGGAGCAGGCAATG+AGG | 0.579166 | 5.2:-31682325 | MS.gene55282:CDS |
| TGTGAGACCTTTGAGGAACC+GGG | 0.579529 | 5.2:+31679811 | None:intergenic |
| CCACGGACGCCACCTCGAGT+TGG | 0.580213 | 5.2:+31684241 | None:intergenic |
| AGGAACCGGGTTCTTCCCAA+GGG | 0.580832 | 5.2:+31679824 | None:intergenic |
| ATTCTCGTGATTCAGATGAC+AGG | 0.582090 | 5.2:-31679615 | MS.gene55282:CDS |
| TTTCAGAACTAGTAAAGAGA+GGG | 0.582339 | 5.2:-31682235 | MS.gene55282:CDS |
| AGCAAGAGAAGCGTGAGAAG+CGG | 0.591268 | 5.2:-31679639 | MS.gene55282:CDS |
| ATGTAAAAGCTGATAAACAC+AGG | 0.592383 | 5.2:-31683898 | MS.gene55282:CDS |
| CCTGTTGGTAGATGGCAGAA+AGG | 0.593241 | 5.2:-31683845 | MS.gene55282:intron |
| GTCCCAAAATGAAGAAATGG+AGG | 0.596320 | 5.2:-31682378 | MS.gene55282:CDS |
| CTCCGCCCTTGGGAAGAACC+CGG | 0.601120 | 5.2:-31679829 | MS.gene55282:CDS |
| AACCGGGTTCTTCCCAAGGG+CGG | 0.607749 | 5.2:+31679827 | None:intergenic |
| AAGGTCACGCTGAAGCAGCA+AGG | 0.608440 | 5.2:-31682190 | MS.gene55282:CDS |
| CATAGTCTCAAGGCTCCTGT+TGG | 0.611584 | 5.2:-31683860 | MS.gene55282:CDS |
| TTATATAGGTCATAGTCTCA+AGG | 0.617267 | 5.2:-31683870 | MS.gene55282:CDS |
| ACTCGAGGTGGCGTCCGTGG+CGG | 0.620619 | 5.2:-31684238 | MS.gene55282:CDS |
| AGGTCACGCTGAAGCAGCAA+GGG | 0.623464 | 5.2:-31682189 | MS.gene55282:CDS |
| AAGCGTGCTAGTCGTCCTCA+AGG | 0.629339 | 5.2:-31682281 | MS.gene55282:CDS |
| CAGGCAATGAGGGAAGCTCT+CGG | 0.634387 | 5.2:-31682314 | MS.gene55282:CDS |
| TGATGGAACAGAGTTCACTT+GGG | 0.635978 | 5.2:-31683924 | MS.gene55282:intron |
| TTATCAAGACGGTTACCTTG+AGG | 0.642277 | 5.2:+31682266 | None:intergenic |
| GGTCTCACATACACCAGCTG+TGG | 0.651509 | 5.2:-31679797 | MS.gene55282:CDS |
| ACAGCAGAAGACTTAGGTGA+AGG | 0.653024 | 5.2:-31682209 | MS.gene55282:CDS |
| AGGAAGAGAAACGTGAAAAG+CGG | 0.661820 | 5.2:-31679681 | MS.gene55282:CDS |
| ACAAGAAAGATAAAGAGAGG+AGG | 0.663634 | 5.2:-31679585 | MS.gene55282:CDS |
| GCTTACGATCTCGACCGCCA+CGG | 0.676707 | 5.2:+31684224 | None:intergenic |
| ATGTATCATCCAACTCGAGG+TGG | 0.688754 | 5.2:-31684250 | MS.gene55282:CDS |
| TGTAAAAGCTGATAAACACA+GGG | 0.690058 | 5.2:-31683897 | MS.gene55282:CDS |
| TGAAAAGCGGCATTCCCGTG+AGG | 0.706921 | 5.2:-31679668 | MS.gene55282:CDS |
| AACATGTATCATCCAACTCG+AGG | 0.712342 | 5.2:-31684253 | MS.gene55282:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATTATAAATTAAA+TGG | - | chr5.2:31683042-31683061 | MS.gene55282:intron | 0.0% |
| !! | AAAAAATTGAAATATAAAGA+TGG | + | chr5.2:31683448-31683467 | None:intergenic | 10.0% |
| !! | ATCATATCATATAAATTATT+TGG | - | chr5.2:31681777-31681796 | MS.gene55282:intron | 10.0% |
| !! | TTAAATAAAAAAACTGATTA+GGG | + | chr5.2:31683208-31683227 | None:intergenic | 10.0% |
| !! | TTTAAATAAAAAAACTGATT+AGG | + | chr5.2:31683209-31683228 | None:intergenic | 10.0% |
| !!! | ATTTATTTCCTTATTTAATT+AGG | - | chr5.2:31682394-31682413 | MS.gene55282:CDS | 10.0% |
| !!! | TTACATTTGTTTTATTTTTA+GGG | - | chr5.2:31681753-31681772 | MS.gene55282:intron | 10.0% |
| !!! | TTTTGTTTTGATATAAATAA+GGG | - | chr5.2:31682425-31682444 | MS.gene55282:intron | 10.0% |
| !! | AAAAATAAAACAAATGTAAC+AGG | + | chr5.2:31681752-31681771 | None:intergenic | 15.0% |
| !! | AAAACCTAAATATAATACAT+CGG | + | chr5.2:31681855-31681874 | None:intergenic | 15.0% |
| !! | AAATTAAACAAAATAGGAAT+TGG | + | chr5.2:31679711-31679730 | None:intergenic | 15.0% |
| !! | AATTAAACAAAATAGGAATT+GGG | + | chr5.2:31679710-31679729 | None:intergenic | 15.0% |
| !! | AATTTGAAAAAGAGAAAAAT+TGG | + | chr5.2:31679646-31679665 | None:intergenic | 15.0% |
| !! | CAACTTCTATATTAAATAAT+TGG | + | chr5.2:31683705-31683724 | None:intergenic | 15.0% |
| !! | CAATTATTTAATATAGAAGT+TGG | - | chr5.2:31683703-31683722 | MS.gene55282:intron | 15.0% |
| !! | CATTAAATAACTAATGTATT+TGG | + | chr5.2:31680511-31680530 | None:intergenic | 15.0% |
| !! | TAAGAAATAAGTTACAATAA+TGG | + | chr5.2:31683953-31683972 | None:intergenic | 15.0% |
| !!! | ATAAATCTTTTAAAAGAATC+AGG | + | chr5.2:31682670-31682689 | None:intergenic | 15.0% |
| !!! | ATATGAAAACTAATTTTAAG+AGG | + | chr5.2:31682354-31682373 | None:intergenic | 15.0% |
| !!! | GTTACATTTGTTTTATTTTT+AGG | - | chr5.2:31681752-31681771 | MS.gene55282:intron | 15.0% |
| !!! | GTTTTGTTTTGATATAAATA+AGG | - | chr5.2:31682424-31682443 | MS.gene55282:intron | 15.0% |
| !!! | TTATATTTAGGTTTTTTTCA+TGG | - | chr5.2:31681860-31681879 | MS.gene55282:intron | 15.0% |
| !!! | TTATATTTTGATTTTTCTCA+TGG | - | chr5.2:31682639-31682658 | MS.gene55282:intron | 15.0% |
| !! | AAAAGGACAAAATTTAAAGA+TGG | + | chr5.2:31681376-31681395 | None:intergenic | 20.0% |
| !! | AAAATTCATGTTTATCAAGA+CGG | + | chr5.2:31681565-31681584 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGAGA+TGG | + | chr5.2:31679623-31679642 | None:intergenic | 20.0% |
| !! | AATTTAAAAAGTAGATGAAG+TGG | - | chr5.2:31683095-31683114 | MS.gene55282:intron | 20.0% |
| !! | AGAAGAGATAAAAAGAATTA+AGG | - | chr5.2:31681469-31681488 | MS.gene55282:intron | 20.0% |
| !! | ATATTTCAAAAGTAATACAG+TGG | - | chr5.2:31681697-31681716 | MS.gene55282:intron | 20.0% |
| !! | ATCTAAACTTACAATTACAT+TGG | + | chr5.2:31681173-31681192 | None:intergenic | 20.0% |
| !! | CAAATTAAATCAAATGGAAA+TGG | + | chr5.2:31682926-31682945 | None:intergenic | 20.0% |
| !! | CTCTAAATCCTAATTAAATA+AGG | + | chr5.2:31682405-31682424 | None:intergenic | 20.0% |
| !! | TAAAATTTAAGAAGCTAGAA+AGG | - | chr5.2:31681213-31681232 | MS.gene55282:intron | 20.0% |
| !! | TATTTCAAAAGTAATACAGT+GGG | - | chr5.2:31681698-31681717 | MS.gene55282:intron | 20.0% |
| !! | TCTTCAAATTAAGGTTAATT+GGG | + | chr5.2:31680332-31680351 | None:intergenic | 20.0% |
| !! | TGAAGTAAAAGGTTTAAATT+TGG | + | chr5.2:31680921-31680940 | None:intergenic | 20.0% |
| !!! | AAAACAACTTTTTAGATTCA+TGG | - | chr5.2:31680456-31680475 | MS.gene55282:intron | 20.0% |
| !!! | AAAACTGTTACTTCAATTAA+AGG | + | chr5.2:31683293-31683312 | None:intergenic | 20.0% |
| !!! | ATTATAATCGTGCAAATTTT+CGG | + | chr5.2:31683254-31683273 | None:intergenic | 20.0% |
| !!! | CTTTTCAGAAACAAAATTTT+AGG | - | chr5.2:31683170-31683189 | MS.gene55282:intron | 20.0% |
| !!! | GTTATGTCTTTTATTTTACT+GGG | + | chr5.2:31682192-31682211 | None:intergenic | 20.0% |
| !!! | TGTTATGTCTTTTATTTTAC+TGG | + | chr5.2:31682193-31682212 | None:intergenic | 20.0% |
| !!! | TGTTTATTATAGTCTTGTAT+AGG | - | chr5.2:31680713-31680732 | MS.gene55282:intron | 20.0% |
| !!! | TTCCATTTGATTTAATTTGA+GGG | - | chr5.2:31682927-31682946 | MS.gene55282:intron | 20.0% |
| !!! | TTTCCATTTGATTTAATTTG+AGG | - | chr5.2:31682926-31682945 | MS.gene55282:intron | 20.0% |
| ! | AAACTTACAATTACATTGGA+TGG | + | chr5.2:31681169-31681188 | None:intergenic | 25.0% |
| ! | AAAGTAGAAAAAAGAGAAGA+CGG | - | chr5.2:31684103-31684122 | MS.gene55282:intron | 25.0% |
| ! | AAATGGTTACAAAAATGAAC+CGG | - | chr5.2:31683059-31683078 | MS.gene55282:intron | 25.0% |
| ! | AATAAGTTACAATAATGGCA+CGG | + | chr5.2:31683948-31683967 | None:intergenic | 25.0% |
| ! | ACAAATAATTTCGTAAGCAA+AGG | + | chr5.2:31683913-31683932 | None:intergenic | 25.0% |
| ! | AGTAAATTGGCTGTTTAAAT+AGG | - | chr5.2:31680818-31680837 | MS.gene55282:intron | 25.0% |
| ! | ATAAACATTAGACTGTTGTT+TGG | - | chr5.2:31681328-31681347 | MS.gene55282:intron | 25.0% |
| ! | ATGTGAAAACTACTTAACAA+GGG | - | chr5.2:31683641-31683660 | MS.gene55282:intron | 25.0% |
| ! | ATTCAATCAAAACTGTTGAT+CGG | - | chr5.2:31680782-31680801 | MS.gene55282:intron | 25.0% |
| ! | ATTTGTAAGAATGAATTTCG+TGG | + | chr5.2:31679753-31679772 | None:intergenic | 25.0% |
| ! | ATTTGTAATCATGCAATTCT+TGG | + | chr5.2:31682247-31682266 | None:intergenic | 25.0% |
| ! | CATCAATTTCTTGAAATTAG+AGG | - | chr5.2:31680236-31680255 | MS.gene55282:intron | 25.0% |
| ! | CTTCAAATTAAGGTTAATTG+GGG | + | chr5.2:31680331-31680350 | None:intergenic | 25.0% |
| ! | GATAAAAAGAATTAAGGAAG+AGG | - | chr5.2:31681475-31681494 | MS.gene55282:intron | 25.0% |
| ! | GATATGAAAAGACTTAACAA+CGG | + | chr5.2:31682453-31682472 | None:intergenic | 25.0% |
| ! | GCGGTAAAATTAAACAAAAT+AGG | + | chr5.2:31679717-31679736 | None:intergenic | 25.0% |
| ! | GTAAGGTAAGGTAAAATAAA+AGG | + | chr5.2:31680009-31680028 | None:intergenic | 25.0% |
| ! | GTCTTCAAATTAAGGTTAAT+TGG | + | chr5.2:31680333-31680352 | None:intergenic | 25.0% |
| ! | TAAAATATGAATGCTTAGCT+TGG | - | chr5.2:31683679-31683698 | MS.gene55282:intron | 25.0% |
| ! | TTCATGGAAATTAATGTATC+TGG | - | chr5.2:31680472-31680491 | MS.gene55282:intron | 25.0% |
| ! | TTCCCTCAAATTAAATCAAA+TGG | + | chr5.2:31682932-31682951 | None:intergenic | 25.0% |
| !! | AAAAACAGCAACTTGATTTT+TGG | - | chr5.2:31682950-31682969 | MS.gene55282:intron | 25.0% |
| !! | AAGTGATTTTATTACACCAA+TGG | - | chr5.2:31682109-31682128 | MS.gene55282:intron | 25.0% |
| !! | ATGAAGTGGCTAATTTTTAT+TGG | - | chr5.2:31683109-31683128 | MS.gene55282:intron | 25.0% |
| !! | ATGTAAATCTTCTGAAAGAT+TGG | + | chr5.2:31681893-31681912 | None:intergenic | 25.0% |
| !! | ATTTTGTCCTTTTATTCAAC+AGG | - | chr5.2:31681383-31681402 | MS.gene55282:intron | 25.0% |
| !! | GAGATCTAGAATTGTAAATA+TGG | + | chr5.2:31682502-31682521 | None:intergenic | 25.0% |
| !! | TAAAGAGCATAAGGAAATTT+CGG | + | chr5.2:31680660-31680679 | None:intergenic | 25.0% |
| !! | TGTAAATCTTCTGAAAGATT+GGG | + | chr5.2:31681892-31681911 | None:intergenic | 25.0% |
| !! | TTTGAAATAATGACAGACAA+GGG | - | chr5.2:31683783-31683802 | MS.gene55282:intron | 25.0% |
| !! | TTTTGTCCTTTTATTCAACA+GGG | - | chr5.2:31681384-31681403 | MS.gene55282:intron | 25.0% |
| !!! | AATAAAGCTCTAAAAACCAT+TGG | + | chr5.2:31682128-31682147 | None:intergenic | 25.0% |
| !!! | ACTTTTTCGCCATATAATAA+AGG | + | chr5.2:31683341-31683360 | None:intergenic | 25.0% |
| !!! | GTAGTTACCAAGTTTAATTT+TGG | - | chr5.2:31682052-31682071 | MS.gene55282:intron | 25.0% |
| !!! | TCATTTTGGTTTTATGGTTT+AGG | - | chr5.2:31681036-31681055 | MS.gene55282:intron | 25.0% |
| !!! | TTTTCGTCATTTTGGTTTTA+TGG | - | chr5.2:31681030-31681049 | MS.gene55282:intron | 25.0% |
| !!! | TTTTGAAATAATGACAGACA+AGG | - | chr5.2:31683782-31683801 | MS.gene55282:intron | 25.0% |
| AAAAAACAGTCTAGTAAGTG+GGG | - | chr5.2:31682784-31682803 | MS.gene55282:intron | 30.0% | |
| AAAAACTGAAGATGAATCTG+AGG | - | chr5.2:31684077-31684096 | MS.gene55282:intron | 30.0% | |
| AAAAAGAATTAAGGAAGAGG+AGG | - | chr5.2:31681478-31681497 | MS.gene55282:intron | 30.0% | |
| AAACACAGGGAGAATTATAT+AGG | - | chr5.2:31679933-31679952 | MS.gene55282:intron | 30.0% | |
| AAAGTCCCAAAATGAAGAAA+TGG | - | chr5.2:31681436-31681455 | MS.gene55282:intron | 30.0% | |
| AAATGGAAATGGAAAGTTGA+TGG | + | chr5.2:31682915-31682934 | None:intergenic | 30.0% | |
| AAGTAGAAAAAAGAGAAGAC+GGG | - | chr5.2:31684104-31684123 | MS.gene55282:intron | 30.0% | |
| AATGAATTTCGTGGAAATCA+GGG | + | chr5.2:31679744-31679763 | None:intergenic | 30.0% | |
| ACCAAGACCAAAATTAAACT+TGG | + | chr5.2:31682062-31682081 | None:intergenic | 30.0% | |
| ACTTATTTGTGCTTGTTTGA+AGG | + | chr5.2:31682300-31682319 | None:intergenic | 30.0% | |
| ATGTAAAAGCTGATAAACAC+AGG | - | chr5.2:31679919-31679938 | MS.gene55282:intron | 30.0% | |
| CAAAAAACAGTCTAGTAAGT+GGG | - | chr5.2:31682783-31682802 | MS.gene55282:intron | 30.0% | |
| CAAGTTTGTCATTCTAACTT+TGG | - | chr5.2:31683751-31683770 | MS.gene55282:intron | 30.0% | |
| CCAATCATATACAATGCAAA+AGG | + | chr5.2:31680593-31680612 | None:intergenic | 30.0% | |
| CGGACTCAAATAATAATCTT+AGG | + | chr5.2:31681835-31681854 | None:intergenic | 30.0% | |
| CTATTTCCAAATAATAGCTG+TGG | + | chr5.2:31683373-31683392 | None:intergenic | 30.0% | |
| CTGTTTGAATTAAAGGAGTA+AGG | + | chr5.2:31680026-31680045 | None:intergenic | 30.0% | |
| GAGTCCGATGTATTATATTT+AGG | - | chr5.2:31681848-31681867 | MS.gene55282:intron | 30.0% | |
| GATGTGAAAACTACTTAACA+AGG | - | chr5.2:31683640-31683659 | MS.gene55282:intron | 30.0% | |
| GCTTCAAAAAAACTGAACTT+TGG | + | chr5.2:31682752-31682771 | None:intergenic | 30.0% | |
| GGCTATTCACATCTAAATAA+GGG | - | chr5.2:31681349-31681368 | MS.gene55282:intron | 30.0% | |
| TAAATTTCTTTACCTGCTAC+CGG | + | chr5.2:31683081-31683100 | None:intergenic | 30.0% | |
| TACTCCTTTAATTCAAACAG+CGG | - | chr5.2:31680026-31680045 | MS.gene55282:intron | 30.0% | |
| TAGTCACATGATATAGTCTT+CGG | + | chr5.2:31680203-31680222 | None:intergenic | 30.0% | |
| TATTTGGATTAAGAACAGCT+GGG | - | chr5.2:31681793-31681812 | MS.gene55282:intron | 30.0% | |
| TCAGTCTTTGCTTAGTAAAT+TGG | - | chr5.2:31680805-31680824 | MS.gene55282:intron | 30.0% | |
| TGAATTAAAGGAGTAAGGTA+AGG | + | chr5.2:31680021-31680040 | None:intergenic | 30.0% | |
| TGGCTATTCACATCTAAATA+AGG | - | chr5.2:31681348-31681367 | MS.gene55282:intron | 30.0% | |
| TGTAAAAGCTGATAAACACA+GGG | - | chr5.2:31679920-31679939 | MS.gene55282:intron | 30.0% | |
| TTAATATAGAAGTTGGCTGT+TGG | - | chr5.2:31683710-31683729 | MS.gene55282:intron | 30.0% | |
| TTATATAGGTCATAGTCTCA+AGG | - | chr5.2:31679947-31679966 | MS.gene55282:intron | 30.0% | |
| TTATTTGGATTAAGAACAGC+TGG | - | chr5.2:31681792-31681811 | MS.gene55282:intron | 30.0% | |
| TTTCAGAACTAGTAAAGAGA+GGG | - | chr5.2:31681582-31681601 | MS.gene55282:intron | 30.0% | |
| ! | AAGATCTGAAGTTTCTTCTA+TGG | - | chr5.2:31680870-31680889 | MS.gene55282:intron | 30.0% |
| ! | ATATCCCTTATTTGTTAAGC+TGG | - | chr5.2:31683607-31683626 | MS.gene55282:intron | 30.0% |
| ! | CCTTTTGCATTGTATATGAT+TGG | - | chr5.2:31680590-31680609 | MS.gene55282:intron | 30.0% |
| ! | CTTTTACTTCAAAGCTCATA+GGG | - | chr5.2:31680930-31680949 | MS.gene55282:intron | 30.0% |
| ! | GAAGAAAAGTAAAGAGCATA+AGG | + | chr5.2:31680669-31680688 | None:intergenic | 30.0% |
| ! | GAAGTAACAGTTTTTGTTGA+AGG | - | chr5.2:31683299-31683318 | MS.gene55282:intron | 30.0% |
| ! | GATCTAAGGTCTTCAAATTA+AGG | + | chr5.2:31680341-31680360 | None:intergenic | 30.0% |
| ! | GATTCATCTTCAGTTTTTCT+TGG | + | chr5.2:31684075-31684094 | None:intergenic | 30.0% |
| ! | TTTTACTTCAAAGCTCATAG+GGG | - | chr5.2:31680931-31680950 | MS.gene55282:intron | 30.0% |
| ! | TTTTCAGAACTAGTAAAGAG+AGG | - | chr5.2:31681581-31681600 | MS.gene55282:intron | 30.0% |
| !! | ACCAAGTTTAATTTTGGTCT+TGG | - | chr5.2:31682058-31682077 | MS.gene55282:intron | 30.0% |
| !! | AGACTTGTTGTATTGACAAT+AGG | - | chr5.2:31680142-31680161 | MS.gene55282:intron | 30.0% |
| !! | AGTTATGATTTTTCGAAGCA+TGG | - | chr5.2:31681977-31681996 | MS.gene55282:intron | 30.0% |
| !! | ATTGTGTTTCTCACTTTTGA+TGG | - | chr5.2:31679876-31679895 | MS.gene55282:intron | 30.0% |
| !! | CTCTTTACTTTTCTTCAACA+TGG | - | chr5.2:31680673-31680692 | MS.gene55282:intron | 30.0% |
| !! | GTTTTTCTTGGTGATTGATT+AGG | + | chr5.2:31684063-31684082 | None:intergenic | 30.0% |
| !! | TTAAATTTGGCTCTAGACTT+GGG | + | chr5.2:31680908-31680927 | None:intergenic | 30.0% |
| !! | TTTAAATTTGGCTCTAGACT+TGG | + | chr5.2:31680909-31680928 | None:intergenic | 30.0% |
| !!! | AAACATGAATGGTTTTAGTG+GGG | - | chr5.2:31682981-31683000 | MS.gene55282:intron | 30.0% |
| !!! | AAGTTTAATTTTGGTCTTGG+TGG | - | chr5.2:31682061-31682080 | MS.gene55282:intron | 30.0% |
| !!! | AGAAACATGAATGGTTTTAG+TGG | - | chr5.2:31682979-31682998 | MS.gene55282:intron | 30.0% |
| !!! | AGCAAATGCTTTTAGCTTAT+AGG | - | chr5.2:31682152-31682171 | MS.gene55282:intron | 30.0% |
| !!! | AGTTTTTTTGAAGCATGAGA+TGG | - | chr5.2:31682758-31682777 | MS.gene55282:intron | 30.0% |
| !!! | CAGCTTTATTTTCGTCATTT+TGG | - | chr5.2:31681022-31681041 | MS.gene55282:intron | 30.0% |
| !!! | GAAACATGAATGGTTTTAGT+GGG | - | chr5.2:31682980-31682999 | MS.gene55282:intron | 30.0% |
| !!! | TTTTATTTTACTGGGCTGTT+AGG | + | chr5.2:31682184-31682203 | None:intergenic | 30.0% |
| AAAACTGAACTTTGGCACAT+TGG | + | chr5.2:31682744-31682763 | None:intergenic | 35.0% | |
| AAACACACTGTTTAAGTCGT+AGG | + | chr5.2:31682558-31682577 | None:intergenic | 35.0% | |
| AACACACTGTTTAAGTCGTA+GGG | + | chr5.2:31682557-31682576 | None:intergenic | 35.0% | |
| ACAAGAAAGATAAAGAGAGG+AGG | - | chr5.2:31684232-31684251 | MS.gene55282:CDS | 35.0% | |
| ATAGCCGCTGTTTGAATTAA+AGG | + | chr5.2:31680033-31680052 | None:intergenic | 35.0% | |
| ATCATGTGACTAGGACATTA+GGG | - | chr5.2:31680211-31680230 | MS.gene55282:intron | 35.0% | |
| CAAAAGCCAAAACAGAACTT+TGG | + | chr5.2:31682870-31682889 | None:intergenic | 35.0% | |
| CAAACGGGACCTTTATTATA+TGG | - | chr5.2:31683329-31683348 | MS.gene55282:intron | 35.0% | |
| CACTAACATAGACATTAGCT+TGG | + | chr5.2:31683472-31683491 | None:intergenic | 35.0% | |
| CCAAAAAACAGTCTAGTAAG+TGG | - | chr5.2:31682782-31682801 | MS.gene55282:intron | 35.0% | |
| CTTGTTAGCAATATCGTTTG+CGG | - | chr5.2:31680270-31680289 | MS.gene55282:intron | 35.0% | |
| GAAGACTATATCATGTGACT+AGG | - | chr5.2:31680202-31680221 | MS.gene55282:intron | 35.0% | |
| GAATGAATTTCGTGGAAATC+AGG | + | chr5.2:31679745-31679764 | None:intergenic | 35.0% | |
| GAATGAGATGGAATTGAAGA+AGG | + | chr5.2:31679678-31679697 | None:intergenic | 35.0% | |
| GACACAAGAAAGATAAAGAG+AGG | - | chr5.2:31684229-31684248 | MS.gene55282:intron | 35.0% | |
| GTCTTTCCCTGTTGAATAAA+AGG | + | chr5.2:31681393-31681412 | None:intergenic | 35.0% | |
| GTGACCAGCTTAACAAATAA+GGG | + | chr5.2:31683614-31683633 | None:intergenic | 35.0% | |
| TAAGGGATATGAGCAATTAC+AGG | + | chr5.2:31683597-31683616 | None:intergenic | 35.0% | |
| TACTAACTACAGAGAGGTTT+AGG | + | chr5.2:31682035-31682054 | None:intergenic | 35.0% | |
| TATCATGTGACTAGGACATT+AGG | - | chr5.2:31680210-31680229 | MS.gene55282:intron | 35.0% | |
| TCTTGAAATTAGAGGCTCTT+GGG | - | chr5.2:31680244-31680263 | MS.gene55282:intron | 35.0% | |
| TGCTTATAAATGTGACCAGA+GGG | - | chr5.2:31680547-31680566 | MS.gene55282:intron | 35.0% | |
| TGCTTATAAATGTGACCGAA+GGG | + | chr5.2:31680435-31680454 | None:intergenic | 35.0% | |
| TGTGACCAGCTTAACAAATA+AGG | + | chr5.2:31683615-31683634 | None:intergenic | 35.0% | |
| TGTTGAAGGATCACAACAAA+CGG | - | chr5.2:31683313-31683332 | MS.gene55282:intron | 35.0% | |
| TTAAACAGTGTGTTTGCTTG+TGG | - | chr5.2:31682563-31682582 | MS.gene55282:intron | 35.0% | |
| TTAAGGAGAAACTTAGGTGA+TGG | + | chr5.2:31680966-31680985 | None:intergenic | 35.0% | |
| TTCTCCTAGGTTGCTTATAA+CGG | - | chr5.2:31681287-31681306 | MS.gene55282:intron | 35.0% | |
| TTCTTGAAATTAGAGGCTCT+TGG | - | chr5.2:31680243-31680262 | MS.gene55282:intron | 35.0% | |
| TTGAATCACACACATAGAAC+AGG | + | chr5.2:31680768-31680787 | None:intergenic | 35.0% | |
| TTGCTTATAAATGTGACCAG+AGG | - | chr5.2:31680546-31680565 | MS.gene55282:intron | 35.0% | |
| TTGCTTATAAATGTGACCGA+AGG | + | chr5.2:31680436-31680455 | None:intergenic | 35.0% | |
| ! | AGCCTCCATTTCTTCATTTT+GGG | + | chr5.2:31681444-31681463 | None:intergenic | 35.0% |
| ! | AGTGTTACTAGTGGTTTCAA+GGG | - | chr5.2:31683488-31683507 | MS.gene55282:intron | 35.0% |
| ! | CCTTTTACTTCAAAGCTCAT+AGG | - | chr5.2:31680929-31680948 | MS.gene55282:intron | 35.0% |
| ! | GATATGCCAAAGTTCTGTTT+TGG | - | chr5.2:31682861-31682880 | MS.gene55282:intron | 35.0% |
| ! | GTCTATGTTAGTGTTACTAG+TGG | - | chr5.2:31683479-31683498 | MS.gene55282:intron | 35.0% |
| ! | TAGTGTTACTAGTGGTTTCA+AGG | - | chr5.2:31683487-31683506 | MS.gene55282:intron | 35.0% |
| ! | TTCTGAAAAGAGAAATGCCA+AGG | + | chr5.2:31683160-31683179 | None:intergenic | 35.0% |
| !! | ACTTAACAAGGGTTGATATG+TGG | - | chr5.2:31683652-31683671 | MS.gene55282:intron | 35.0% |
| !! | CCTATGAGCTTTGAAGTAAA+AGG | + | chr5.2:31680932-31680951 | None:intergenic | 35.0% |
| !! | TTCAAAAGCACTGCATAAGT+TGG | - | chr5.2:31681095-31681114 | MS.gene55282:intron | 35.0% |
| !!! | AAGACCTTTTTTGGTATACC+CGG | - | chr5.2:31681408-31681427 | MS.gene55282:intron | 35.0% |
| !!! | ATTTTGGGACTTTTTATCCC+GGG | + | chr5.2:31681429-31681448 | None:intergenic | 35.0% |
| !!! | CATTTTGGGACTTTTTATCC+CGG | + | chr5.2:31681430-31681449 | None:intergenic | 35.0% |
| !!! | CCACTTACTAGACTGTTTTT+TGG | + | chr5.2:31682785-31682804 | None:intergenic | 35.0% |
| AAAAGAGAAGACGGGAAGAA+AGG | - | chr5.2:31684112-31684131 | MS.gene55282:intron | 40.0% | |
| AGAAAGATAAAGAGAGGAGG+AGG | - | chr5.2:31684235-31684254 | MS.gene55282:CDS | 40.0% | |
| AGGAAGAGAAACGTGAAAAG+CGG | - | chr5.2:31684136-31684155 | MS.gene55282:intron | 40.0% | |
| ATTCTCGTGATTCAGATGAC+AGG | - | chr5.2:31684202-31684221 | MS.gene55282:intron | 40.0% | |
| CTTAGATCACACTCTTCAAG+TGG | - | chr5.2:31680353-31680372 | MS.gene55282:intron | 40.0% | |
| CTTGAAATTAGAGGCTCTTG+GGG | - | chr5.2:31680245-31680264 | MS.gene55282:intron | 40.0% | |
| GAAGCTAGAAAGGTTGAAGA+TGG | - | chr5.2:31681223-31681242 | MS.gene55282:intron | 40.0% | |
| GGTAACTACTAACTACAGAG+AGG | + | chr5.2:31682041-31682060 | None:intergenic | 40.0% | |
| GTCCCAAAATGAAGAAATGG+AGG | - | chr5.2:31681439-31681458 | MS.gene55282:intron | 40.0% | |
| GTTAAAATTCTGCTGCACGA+TGG | + | chr5.2:31680060-31680079 | None:intergenic | 40.0% | |
| GTTATAAGCAACCTAGGAGA+AGG | + | chr5.2:31681288-31681307 | None:intergenic | 40.0% | |
| GTTGAAGGATCACAACAAAC+GGG | - | chr5.2:31683314-31683333 | MS.gene55282:intron | 40.0% | |
| GTTTGCTTGTGGTCACATTT+AGG | - | chr5.2:31682574-31682593 | MS.gene55282:intron | 40.0% | |
| TACAAAAATGAACCGGTAGC+AGG | - | chr5.2:31683066-31683085 | MS.gene55282:intron | 40.0% | |
| TACAAATGTAGCCTGAGGAT+AGG | + | chr5.2:31681002-31681021 | None:intergenic | 40.0% | |
| TAGGATATAGTGCAGGCTTA+AGG | + | chr5.2:31680983-31681002 | None:intergenic | 40.0% | |
| TATAAATGTGACCGAAGGGA+GGG | + | chr5.2:31680431-31680450 | None:intergenic | 40.0% | |
| TATCCCGGGTATACCAAAAA+AGG | + | chr5.2:31681415-31681434 | None:intergenic | 40.0% | |
| TCCAAATAATAGCTGTGGAG+TGG | + | chr5.2:31683368-31683387 | None:intergenic | 40.0% | |
| TCCACTCCACAGCTATTATT+TGG | - | chr5.2:31683364-31683383 | MS.gene55282:intron | 40.0% | |
| TCTCCTAGGTTGCTTATAAC+GGG | - | chr5.2:31681288-31681307 | MS.gene55282:intron | 40.0% | |
| TCTCTTGCTTTCTTTCCTCA+CGG | + | chr5.2:31684167-31684186 | None:intergenic | 40.0% | |
| TGATGGAACAGAGTTCACTT+GGG | - | chr5.2:31679893-31679912 | MS.gene55282:intron | 40.0% | |
| TGGCAGATGAGAAACATGAA+TGG | - | chr5.2:31682970-31682989 | MS.gene55282:intron | 40.0% | |
| TTACTAGTGGTTTCAAGGGA+GGG | - | chr5.2:31683492-31683511 | MS.gene55282:intron | 40.0% | |
| TTATAAATGTGACCGAAGGG+AGG | + | chr5.2:31680432-31680451 | None:intergenic | 40.0% | |
| TTATCAAGACGGTTACCTTG+AGG | + | chr5.2:31681554-31681573 | None:intergenic | 40.0% | |
| TTGATGGAACAGAGTTCACT+TGG | - | chr5.2:31679892-31679911 | MS.gene55282:intron | 40.0% | |
| ! | CACTTGAAGAGTGTGATCTA+AGG | + | chr5.2:31680355-31680374 | None:intergenic | 40.0% |
| ! | CAGCCTCCATTTCTTCATTT+TGG | + | chr5.2:31681445-31681464 | None:intergenic | 40.0% |
| ! | CTTGGTGATTGATTAGGCAT+AGG | + | chr5.2:31684057-31684076 | None:intergenic | 40.0% |
| ! | GATGGAGTTGTAGCTTTTCA+TGG | + | chr5.2:31682897-31682916 | None:intergenic | 40.0% |
| ! | GGGAGAAAGTATGAATGAGA+TGG | + | chr5.2:31679690-31679709 | None:intergenic | 40.0% |
| !! | AAAGCACTGCATAAGTTGGT+TGG | - | chr5.2:31681099-31681118 | MS.gene55282:intron | 40.0% |
| !!! | AGACCTTTTTTGGTATACCC+GGG | - | chr5.2:31681409-31681428 | MS.gene55282:intron | 40.0% |
| !!! | CAACAGGGAAAGACCTTTTT+TGG | - | chr5.2:31681399-31681418 | MS.gene55282:intron | 40.0% |
| !!! | TTCAAGGTGTTGGTTTTGCA+AGG | - | chr5.2:31681651-31681670 | MS.gene55282:intron | 40.0% |
| AATTAAGGAAGAGGAGGAGC+AGG | - | chr5.2:31681484-31681503 | MS.gene55282:intron | 45.0% | |
| ACAGCAGAAGACTTAGGTGA+AGG | - | chr5.2:31681608-31681627 | MS.gene55282:intron | 45.0% | |
| AGCTGTACAAATGTAGCCTG+AGG | + | chr5.2:31681007-31681026 | None:intergenic | 45.0% | |
| AGCTTGCATAATACTCCCTC+TGG | + | chr5.2:31680565-31680584 | None:intergenic | 45.0% | |
| ATGTATCATCCAACTCGAGG+TGG | - | chr5.2:31679567-31679586 | MS.gene55282:CDS | 45.0% | |
| ATTGGTGTGCGAGTGTGTTA+GGG | - | chr5.2:31683127-31683146 | MS.gene55282:intron | 45.0% | |
| CTACCCGTTATAAGCAACCT+AGG | + | chr5.2:31681294-31681313 | None:intergenic | 45.0% | |
| CTCTTGCTTTCTTTCCTCAC+GGG | + | chr5.2:31684166-31684185 | None:intergenic | 45.0% | |
| CTGAGGATAGGATATAGTGC+AGG | + | chr5.2:31680990-31681009 | None:intergenic | 45.0% | |
| CTGCACTATATCCTATCCTC+AGG | - | chr5.2:31680988-31681007 | MS.gene55282:intron | 45.0% | |
| CTGTTTAAGTCGTAGGGTGT+TGG | + | chr5.2:31682551-31682570 | None:intergenic | 45.0% | |
| GCAGGCTTAAGGAGAAACTT+AGG | + | chr5.2:31680972-31680991 | None:intergenic | 45.0% | |
| GTAGCACATCAAACACACAC+TGG | + | chr5.2:31681957-31681976 | None:intergenic | 45.0% | |
| GTTACTAGTGGTTTCAAGGG+AGG | - | chr5.2:31683491-31683510 | MS.gene55282:intron | 45.0% | |
| TACTAGTGGTTTCAAGGGAG+GGG | - | chr5.2:31683493-31683512 | MS.gene55282:intron | 45.0% | |
| TATTGGTGTGCGAGTGTGTT+AGG | - | chr5.2:31683126-31683145 | MS.gene55282:intron | 45.0% | |
| TGGATTAAGAACAGCTGGGT+GGG | - | chr5.2:31681797-31681816 | MS.gene55282:intron | 45.0% | |
| TGGTGTATGTGAGACCTTTG+AGG | + | chr5.2:31684016-31684035 | None:intergenic | 45.0% | |
| TTGGATTAAGAACAGCTGGG+TGG | - | chr5.2:31681796-31681815 | MS.gene55282:intron | 45.0% | |
| TTGGCACATTGGACTCAAAC+TGG | + | chr5.2:31682733-31682752 | None:intergenic | 45.0% | |
| ! | ATGTGAGACCTTTGAGGAAC+CGG | + | chr5.2:31684010-31684029 | None:intergenic | 45.0% |
| ! | GGAGGCATGATTCAGATTGA+AGG | - | chr5.2:31684253-31684272 | MS.gene55282:CDS | 45.0% |
| ! | GGTACATTTTCTACCACAGC+TGG | + | chr5.2:31684036-31684055 | None:intergenic | 45.0% |
| ! | TTAATTGGGGTTAGTGCAGC+AGG | + | chr5.2:31680318-31680337 | None:intergenic | 45.0% |
| !! | AGGTTGCTTATAACGGGTAG+AGG | - | chr5.2:31681294-31681313 | MS.gene55282:intron | 45.0% |
| !! | GGGAGTATTATGCAAGCTGA+AGG | - | chr5.2:31680567-31680586 | MS.gene55282:intron | 45.0% |
| !! | GGTTGCTTATAACGGGTAGA+GGG | - | chr5.2:31681295-31681314 | MS.gene55282:intron | 45.0% |
| !!! | CATGAATGGTTTTAGTGGGG+AGG | - | chr5.2:31682984-31683003 | MS.gene55282:intron | 45.0% |
| CATAGTCTCAAGGCTCCTGT+TGG | - | chr5.2:31679957-31679976 | MS.gene55282:intron | 50.0% | |
| CCATCCTCTTTCCTTCTCCT+AGG | - | chr5.2:31681274-31681293 | MS.gene55282:intron | 50.0% | |
| CCTAGGAGAAGGAAAGAGGA+TGG | + | chr5.2:31681277-31681296 | None:intergenic | 50.0% | |
| CCTTTCTGCCATCTACCAAC+AGG | + | chr5.2:31679975-31679994 | None:intergenic | 50.0% | |
| GAGAAGACGGGAAGAAAGGA+AGG | - | chr5.2:31684116-31684135 | MS.gene55282:intron | 50.0% | |
| GCAACCTAGGAGAAGGAAAG+AGG | + | chr5.2:31681281-31681300 | None:intergenic | 50.0% | |
| GGGTCTACAGCAGAAGACTT+AGG | - | chr5.2:31681602-31681621 | MS.gene55282:intron | 50.0% | |
| TCGTGGAAATCAGGGTTGTG+CGG | + | chr5.2:31679736-31679755 | None:intergenic | 50.0% | |
| TGAAGTGTACTCCCTCCCTT+CGG | - | chr5.2:31680417-31680436 | MS.gene55282:intron | 50.0% | |
| ! | AGCAAGAGAAGCGTGAGAAG+CGG | - | chr5.2:31684178-31684197 | MS.gene55282:intron | 50.0% |
| ! | CCTGTTGGTAGATGGCAGAA+AGG | - | chr5.2:31679972-31679991 | MS.gene55282:intron | 50.0% |
| ! | TCAAGGCTCCTGTTGGTAGA+TGG | - | chr5.2:31679964-31679983 | MS.gene55282:intron | 50.0% |
| ! | TGTGAGACCTTTGAGGAACC+GGG | + | chr5.2:31684009-31684028 | None:intergenic | 50.0% |
| !! | TCGTAGGGTGTTGGATAGAG+AGG | + | chr5.2:31682542-31682561 | None:intergenic | 50.0% |
| AAGAGGAGGAGCAGGCAATG+AGG | - | chr5.2:31681492-31681511 | MS.gene55282:intron | 55.0% | |
| AAGCGTGCTAGTCGTCCTCA+AGG | - | chr5.2:31681536-31681555 | MS.gene55282:intron | 55.0% | |
| AAGGTCACGCTGAAGCAGCA+AGG | - | chr5.2:31681627-31681646 | MS.gene55282:intron | 55.0% | |
| AATGAGGGAAGCTCTCGGCT+TGG | - | chr5.2:31681508-31681527 | MS.gene55282:intron | 55.0% | |
| AGAGGAGGAGCAGGCAATGA+GGG | - | chr5.2:31681493-31681512 | MS.gene55282:intron | 55.0% | |
| AGGAACCGGGTTCTTCCCAA+GGG | + | chr5.2:31683996-31684015 | None:intergenic | 55.0% | |
| AGGTCACGCTGAAGCAGCAA+GGG | - | chr5.2:31681628-31681647 | MS.gene55282:intron | 55.0% | |
| CAGGCAATGAGGGAAGCTCT+CGG | - | chr5.2:31681503-31681522 | MS.gene55282:intron | 55.0% | |
| GCAGCAAGGGTTCAAGGTGT+TGG | - | chr5.2:31681641-31681660 | MS.gene55282:intron | 55.0% | |
| GCTGAAGCAGCAAGGGTTCA+AGG | - | chr5.2:31681635-31681654 | MS.gene55282:intron | 55.0% | |
| GGAAGAACCCGGTTCCTCAA+AGG | - | chr5.2:31683999-31684018 | MS.gene55282:intron | 55.0% | |
| GGGGAGTGGAAATGGTTGGA+TGG | - | chr5.2:31683512-31683531 | MS.gene55282:intron | 55.0% | |
| GGTCTCACATACACCAGCTG+TGG | - | chr5.2:31684020-31684039 | MS.gene55282:intron | 55.0% | |
| TCAAGGGAGGGGAGTGGAAA+TGG | - | chr5.2:31683504-31683523 | MS.gene55282:intron | 55.0% | |
| TGAAAAGCGGCATTCCCGTG+AGG | - | chr5.2:31684149-31684168 | MS.gene55282:intron | 55.0% | |
| TGAGGACGACTAGCACGCTT+AGG | + | chr5.2:31681536-31681555 | None:intergenic | 55.0% | |
| ! | TGTGTTAGGGAGCGTGACCT+TGG | - | chr5.2:31683140-31683159 | MS.gene55282:intron | 55.0% |
| AACCGGGTTCTTCCCAAGGG+CGG | + | chr5.2:31683993-31684012 | None:intergenic | 60.0% | |
| ACAGCTGGGTGGGTGACATC+TGG | - | chr5.2:31681807-31681826 | MS.gene55282:intron | 60.0% | |
| GAGGAACCGGGTTCTTCCCA+AGG | + | chr5.2:31683997-31684016 | None:intergenic | 60.0% | |
| GCTTACGATCTCGACCGCCA+CGG | + | chr5.2:31679596-31679615 | None:intergenic | 60.0% | |
| GGGAGGGGAGTGGAAATGGT+TGG | - | chr5.2:31683508-31683527 | MS.gene55282:intron | 60.0% | |
| GTGCAGAGAACTCCGCCCTT+GGG | - | chr5.2:31683978-31683997 | MS.gene55282:intron | 60.0% | |
| GTGGTTTCAAGGGAGGGGAG+TGG | - | chr5.2:31683498-31683517 | MS.gene55282:intron | 60.0% | |
| TGTGCAGAGAACTCCGCCCT+TGG | - | chr5.2:31683977-31683996 | MS.gene55282:intron | 60.0% | |
| CTCCGCCCTTGGGAAGAACC+CGG | - | chr5.2:31683988-31684007 | MS.gene55282:intron | 65.0% | |
| ACTCGAGGTGGCGTCCGTGG+CGG | - | chr5.2:31679579-31679598 | MS.gene55282:CDS | 70.0% | |
| CCAACTCGAGGTGGCGTCCG+TGG | - | chr5.2:31679576-31679595 | MS.gene55282:CDS | 70.0% | |
| CCACGGACGCCACCTCGAGT+TGG | + | chr5.2:31679579-31679598 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 31679567 | 31684272 | 31679567 | ID=MS.gene55282 |
| chr5.2 | mRNA | 31679567 | 31684272 | 31679567 | ID=MS.gene55282.t1;Parent=MS.gene55282 |
| chr5.2 | exon | 31684230 | 31684272 | 31684230 | ID=MS.gene55282.t1.exon1;Parent=MS.gene55282.t1 |
| chr5.2 | CDS | 31684230 | 31684272 | 31684230 | ID=cds.MS.gene55282.t1;Parent=MS.gene55282.t1 |
| chr5.2 | exon | 31683846 | 31683935 | 31683846 | ID=MS.gene55282.t1.exon2;Parent=MS.gene55282.t1 |
| chr5.2 | CDS | 31683846 | 31683935 | 31683846 | ID=cds.MS.gene55282.t1;Parent=MS.gene55282.t1 |
| chr5.2 | exon | 31682167 | 31682434 | 31682167 | ID=MS.gene55282.t1.exon3;Parent=MS.gene55282.t1 |
| chr5.2 | CDS | 31682167 | 31682434 | 31682167 | ID=cds.MS.gene55282.t1;Parent=MS.gene55282.t1 |
| chr5.2 | exon | 31679567 | 31679855 | 31679567 | ID=MS.gene55282.t1.exon4;Parent=MS.gene55282.t1 |
| chr5.2 | CDS | 31679567 | 31679855 | 31679567 | ID=cds.MS.gene55282.t1;Parent=MS.gene55282.t1 |
| Gene Sequence |
| Protein sequence |
