Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55397.t1 | XP_003614041.2 | 98.9 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 1.20E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55397.t1 | Q99MB4 | 39.2 | 362 | 206 | 5 | 2 | 356 | 13 | 367 | 1.5e-67 | 258.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55397.t1 | G7JWS4 | 98.9 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 8.8e-202 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene55397 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene55397 | 0.821244 | 4.48E-53 | -1.69E-46 |
| MS.gene050317 | MS.gene55397 | 0.826833 | 2.18E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene55397 | -0.809213 | 2.11E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene55397 | 0.820227 | 7.67E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene55397 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene55397 | 0.809296 | 2.03E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene55397 | 0.813849 | 2.08E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene55397 | 0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene55397 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene55397 | 0.803144 | 4.01E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene55397 | 0.850302 | 1.85E-60 | -1.69E-46 |
| MS.gene054658 | MS.gene55397 | 0.828765 | 7.50E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene55397 | 0.801802 | 7.58E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene55397 | 0.815991 | 6.96E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene55397 | 0.823575 | 1.29E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene55397 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene056552 | MS.gene55397 | 0.810763 | 9.80E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene55397 | 0.813464 | 2.53E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene55397 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene55397 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene55397 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene55397 | 0.819355 | 1.21E-52 | -1.69E-46 |
| MS.gene058399 | MS.gene55397 | 0.807006 | 6.24E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene55397 | 0.807638 | 4.58E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene55397 | 0.822329 | 2.51E-53 | -1.69E-46 |
| MS.gene059249 | MS.gene55397 | 0.806646 | 7.44E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene55397 | 0.844204 | 8.74E-59 | -1.69E-46 |
| MS.gene060084 | MS.gene55397 | 0.813805 | 2.13E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene55397 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene55397 | 0.829039 | 6.43E-55 | -1.69E-46 |
| MS.gene060586 | MS.gene55397 | 0.833073 | 6.58E-56 | -1.69E-46 |
| MS.gene060683 | MS.gene55397 | 0.828993 | 6.60E-55 | -1.69E-46 |
| MS.gene060685 | MS.gene55397 | 0.823266 | 1.52E-53 | -1.69E-46 |
| MS.gene060907 | MS.gene55397 | 0.806198 | 9.24E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene55397 | 0.812845 | 3.45E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55397 | MS.gene066450 | PPI |
| MS.gene75176 | MS.gene55397 | PPI |
| MS.gene55397 | MS.gene90838 | PPI |
| MS.gene55397 | MS.gene029104 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55397.t1 | MTR_5g044050 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 735 |
| MS.gene55397.t1 | MTR_8g071110 | 39.155 | 355 | 195 | 7 | 22 | 362 | 57 | 404 | 1.03e-71 | 229 |
| MS.gene55397.t1 | MTR_1g115505 | 36.412 | 379 | 191 | 8 | 24 | 366 | 83 | 447 | 1.71e-68 | 222 |
| MS.gene55397.t1 | MTR_5g021440 | 89.583 | 48 | 4 | 1 | 1 | 48 | 1 | 47 | 1.57e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55397.t1 | AT1G26520 | 73.130 | 361 | 91 | 2 | 4 | 361 | 13 | 370 | 0.0 | 543 |
| MS.gene55397.t1 | AT1G15730 | 38.275 | 371 | 186 | 7 | 24 | 362 | 86 | 445 | 4.27e-75 | 239 |
| MS.gene55397.t1 | AT1G80480 | 37.173 | 382 | 198 | 7 | 12 | 362 | 71 | 441 | 4.76e-73 | 234 |
Find 73 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTTGGCATCTATTCTT+TGG | 0.207860 | 5.2:-34148854 | MS.gene55397:CDS |
| AATGAGTTTGGTGAGGAAAT+TGG | 0.300166 | 5.2:-34149531 | MS.gene55397:CDS |
| CTACGAGTGTGTTAATGTTA+TGG | 0.302882 | 5.2:+34147878 | None:intergenic |
| TCAGCATGCCGCACATTTAG+AGG | 0.314137 | 5.2:-34147700 | MS.gene55397:intron |
| TATGGCTAGAGGAGATTCTT+TGG | 0.317773 | 5.2:-34147190 | MS.gene55397:CDS |
| TGATGAATTGCATACTTTGC+AGG | 0.320221 | 5.2:-34147108 | MS.gene55397:intron |
| ATGAATAAGATAGTATTTAT+AGG | 0.327529 | 5.2:-34144691 | MS.gene55397:intron |
| AATTCTTAACAAGGTTGATT+TGG | 0.330079 | 5.2:-34147947 | MS.gene55397:CDS |
| TTGGGAGAAGAAATATGATA+TGG | 0.330619 | 5.2:-34147171 | MS.gene55397:CDS |
| AACAGAAGATTGTTGAGAAA+TGG | 0.344084 | 5.2:+34150352 | None:intergenic |
| GAGCTTTCAAGCCATTGATT+AGG | 0.361287 | 5.2:+34144565 | None:intergenic |
| GCTGTGATATTGAATGAGTT+TGG | 0.371555 | 5.2:-34149543 | MS.gene55397:CDS |
| GCTATCTGAAAATATGCTTC+AGG | 0.372809 | 5.2:+34148335 | None:intergenic |
| TTGCACTGTTAAGCATAGTT+TGG | 0.374329 | 5.2:-34149427 | MS.gene55397:CDS |
| AAACAAATACACAGCCTAAC+AGG | 0.375928 | 5.2:+34144536 | None:intergenic |
| TGTGGCTAATCCAGCACCTT+TGG | 0.381484 | 5.2:-34148868 | MS.gene55397:CDS |
| ACTCTCATCACTGGTTATCT+TGG | 0.383465 | 5.2:-34150323 | MS.gene55397:CDS |
| AACCATGGCAGACTCGTATA+TGG | 0.384207 | 5.2:-34147208 | MS.gene55397:intron |
| TTTGGCATCTATTCTTTGGT+TGG | 0.414831 | 5.2:-34148850 | MS.gene55397:CDS |
| TTCTCTGCACAAGCTGCTCA+AGG | 0.418476 | 5.2:+34149397 | None:intergenic |
| TAGGCTAGACCATATATTGC+TGG | 0.419326 | 5.2:-34148901 | MS.gene55397:CDS |
| AGAATAGATGCCAAAGGTGC+TGG | 0.420889 | 5.2:+34148858 | None:intergenic |
| TTGGTATCTGCAGAAGGCTC+TGG | 0.429405 | 5.2:-34147928 | MS.gene55397:CDS |
| CAGTAGTTTCCAGCAATATA+TGG | 0.431248 | 5.2:+34148892 | None:intergenic |
| ATGGCTAGAGGAGATTCTTT+GGG | 0.440901 | 5.2:-34147189 | MS.gene55397:CDS |
| AGTGGAAGAAAGAAGAAAAC+AGG | 0.446364 | 5.2:-34144714 | MS.gene55397:CDS |
| TCCAGTCTCACTGATGCATA+TGG | 0.458810 | 5.2:+34147617 | None:intergenic |
| ATCACTGGTTATCTTGGTGC+TGG | 0.459836 | 5.2:-34150317 | MS.gene55397:CDS |
| GAAAGAGCATTGATAAATGA+AGG | 0.462576 | 5.2:-34149504 | MS.gene55397:CDS |
| GAAAGCTCTTGCAACCTGTT+AGG | 0.464002 | 5.2:-34144550 | None:intergenic |
| AAAGAAGATGTCCTAATCAA+TGG | 0.473604 | 5.2:-34144576 | MS.gene55397:CDS |
| TCTTTCTTCCACTTCCGAGC+AGG | 0.475644 | 5.2:+34144724 | None:intergenic |
| AGCCACGGTGCTCCTTGAGC+TGG | 0.477134 | 5.2:+34148369 | None:intergenic |
| GTGGTGCAGTTGTTGAAGAA+TGG | 0.477782 | 5.2:-34149476 | MS.gene55397:CDS |
| TCTTTGGTTGGATGAACAGT+TGG | 0.479469 | 5.2:-34148838 | MS.gene55397:CDS |
| GTTGGTGTCACTCTCATCAC+TGG | 0.482192 | 5.2:-34150332 | MS.gene55397:CDS |
| TGGTGCAGTTGTTGAAGAAT+GGG | 0.484968 | 5.2:-34149475 | MS.gene55397:CDS |
| AGATTGTTCCTGCTCGGAAG+TGG | 0.491918 | 5.2:-34144732 | MS.gene55397:CDS |
| GAATGGGTTGAACTTGCTAA+TGG | 0.500533 | 5.2:-34149459 | MS.gene55397:CDS |
| ATTTCTCAACAATCTTCTGT+TGG | 0.503553 | 5.2:-34150350 | MS.gene55397:CDS |
| ACCATATGCATCAGTGAGAC+TGG | 0.507489 | 5.2:-34147618 | MS.gene55397:CDS |
| CATATATTGCTGGAAACTAC+TGG | 0.512907 | 5.2:-34148891 | MS.gene55397:CDS |
| TGGAACAGTTGATCTTGATA+AGG | 0.538502 | 5.2:-34147598 | MS.gene55397:intron |
| TCTCTGCACAAGCTGCTCAA+GGG | 0.549355 | 5.2:+34149398 | None:intergenic |
| TGAACTCTCAACATGGGAAG+AGG | 0.549391 | 5.2:-34149569 | MS.gene55397:CDS |
| AAATGTTCGCTTCCAGCTCA+AGG | 0.553773 | 5.2:-34148381 | MS.gene55397:CDS |
| TTGATAAATGAAGGGGAAAG+TGG | 0.553774 | 5.2:-34149495 | MS.gene55397:CDS |
| CATATATTGAACTCTCAACA+TGG | 0.555523 | 5.2:-34149576 | MS.gene55397:CDS |
| AGAAGGCTCTGGAGCTCTAG+AGG | 0.581340 | 5.2:-34147917 | MS.gene55397:CDS |
| CATTTAAGACTCCTTTGCAA+CGG | 0.583923 | 5.2:+34147141 | None:intergenic |
| GTTGATTTGGTATCTGCAGA+AGG | 0.585096 | 5.2:-34147934 | MS.gene55397:CDS |
| AAAGAGCATTGATAAATGAA+GGG | 0.594588 | 5.2:-34149503 | MS.gene55397:CDS |
| GGACATTGTAATTCTTAACA+AGG | 0.607377 | 5.2:-34147956 | MS.gene55397:CDS |
| AAGAGCATTGATAAATGAAG+GGG | 0.611247 | 5.2:-34149502 | MS.gene55397:CDS |
| TATACGAGATTGTTCCTGCT+CGG | 0.613095 | 5.2:-34144738 | MS.gene55397:CDS |
| ATGGATGTATACCGTTGCAA+AGG | 0.617207 | 5.2:-34147152 | MS.gene55397:CDS |
| TCTTGGTGCTGGCAAATCCA+CGG | 0.620578 | 5.2:-34150306 | MS.gene55397:intron |
| CTGCAGTATCGTAAGCGTGG+CGG | 0.624449 | 5.2:+34147806 | None:intergenic |
| ATATATTGAACTCTCAACAT+GGG | 0.629606 | 5.2:-34149575 | MS.gene55397:CDS |
| TGTTGAATCTCAACAGCAAG+AGG | 0.636495 | 5.2:+34150392 | None:intergenic |
| TGAATCTCAACAGCAAGAGG+TGG | 0.637466 | 5.2:+34150395 | None:intergenic |
| GCAGACTCGTATATGGCTAG+AGG | 0.641181 | 5.2:-34147201 | MS.gene55397:intron |
| TAACAATGCCTCTAAATGTG+CGG | 0.644611 | 5.2:+34147692 | None:intergenic |
| AGCTTGTGCAGAGAAAAGAA+AGG | 0.645456 | 5.2:-34149389 | MS.gene55397:intron |
| CAGGAAATGAAGATGAGCCA+CGG | 0.651825 | 5.2:+34148354 | None:intergenic |
| GTTTGGTGAGGAAATTGGAG+TGG | 0.654078 | 5.2:-34149526 | MS.gene55397:CDS |
| AGCTCTAGAGGAACTCGAGG+AGG | 0.659807 | 5.2:-34147905 | MS.gene55397:CDS |
| AACCAAAGAATAGATGCCAA+AGG | 0.660580 | 5.2:+34148852 | None:intergenic |
| TTACTGCAGTATCGTAAGCG+TGG | 0.673945 | 5.2:+34147803 | None:intergenic |
| TGGAGCTCTAGAGGAACTCG+AGG | 0.681621 | 5.2:-34147908 | MS.gene55397:CDS |
| ATTGCTGGAAACTACTGGTG+TGG | 0.682013 | 5.2:-34148886 | MS.gene55397:CDS |
| GATATTGAATGAGTTTGGTG+AGG | 0.685395 | 5.2:-34149538 | MS.gene55397:CDS |
| TTCCAGCTCAAGGAGCACCG+TGG | 0.718846 | 5.2:-34148371 | MS.gene55397:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAATCTTAC+AGG | - | chr5.2:34145222-34145241 | MS.gene55397:intron | 10.0% |
| !! | AAAAAAAAAAAAATCTTACA+GGG | - | chr5.2:34145223-34145242 | MS.gene55397:intron | 10.0% |
| !! | ATTAAAACTCAAATATTATA+CGG | + | chr5.2:34150167-34150186 | None:intergenic | 10.0% |
| !! | ATTTAAATAAATTACTTATC+TGG | - | chr5.2:34146267-34146286 | MS.gene55397:intron | 10.0% |
| !! | TTTAAATAAATTACTTATCT+GGG | - | chr5.2:34146268-34146287 | MS.gene55397:intron | 10.0% |
| !!! | ATTAAAAAAACAGAATTTTA+AGG | + | chr5.2:34149135-34149154 | None:intergenic | 10.0% |
| !!! | TTAATTTTTAAATCACTTAT+CGG | - | chr5.2:34150182-34150201 | MS.gene55397:intron | 10.0% |
| !! | ATGAATAAGATAGTATTTAT+AGG | - | chr5.2:34150279-34150298 | MS.gene55397:intron | 15.0% |
| !! | TAAATCATTTGATTGATATT+TGG | - | chr5.2:34149926-34149945 | MS.gene55397:intron | 15.0% |
| !! | TATTTAGTGTACTATTTATA+AGG | - | chr5.2:34147988-34148007 | MS.gene55397:intron | 15.0% |
| !! | TATTTATAAGAGATTCAAAA+GGG | + | chr5.2:34145982-34146001 | None:intergenic | 15.0% |
| !! | TGAGATGTATATAAAAATAT+TGG | - | chr5.2:34148906-34148925 | MS.gene55397:intron | 15.0% |
| !! | TTATATACATAAGCAATAAT+AGG | + | chr5.2:34145730-34145749 | None:intergenic | 15.0% |
| !! | TTTACTTATATATTTCGAAA+AGG | - | chr5.2:34149855-34149874 | MS.gene55397:intron | 15.0% |
| !!! | AAGTATTTTTTAATTGGATT+TGG | - | chr5.2:34144913-34144932 | MS.gene55397:intron | 15.0% |
| !!! | AATTAATTCATTTGTTGTTT+GGG | - | chr5.2:34148107-34148126 | MS.gene55397:intron | 15.0% |
| !!! | ATGTTTATTTTTTGATTAAC+AGG | - | chr5.2:34150361-34150380 | MS.gene55397:CDS | 15.0% |
| !!! | TAGTACAATTAAACATTTTT+AGG | - | chr5.2:34146033-34146052 | MS.gene55397:intron | 15.0% |
| !!! | TCATTTTCTTTTTTGTTATT+GGG | - | chr5.2:34144754-34144773 | MS.gene55397:CDS | 15.0% |
| !!! | TTCATTTTCTTTTTTGTTAT+TGG | - | chr5.2:34144753-34144772 | MS.gene55397:CDS | 15.0% |
| !! | AAAGAAAATGAAAGTGAAAA+AGG | + | chr5.2:34144745-34144764 | None:intergenic | 20.0% |
| !! | ACCTGAAAAACATTTATAAA+TGG | - | chr5.2:34149096-34149115 | MS.gene55397:intron | 20.0% |
| !! | AGTTAATATTGTGGTTTATT+TGG | - | chr5.2:34149808-34149827 | MS.gene55397:intron | 20.0% |
| !! | ATTTATAAGAGATTCAAAAG+GGG | + | chr5.2:34145981-34146000 | None:intergenic | 20.0% |
| !! | CAAAAAACACTATAATTGTA+AGG | - | chr5.2:34145254-34145273 | MS.gene55397:intron | 20.0% |
| !! | CATGATATAAAATACAAGTT+AGG | + | chr5.2:34147738-34147757 | None:intergenic | 20.0% |
| !! | CCTGAAAAACATTTATAAAT+GGG | - | chr5.2:34149097-34149116 | MS.gene55397:intron | 20.0% |
| !! | CTATTTATAAGAGATTCAAA+AGG | + | chr5.2:34145983-34146002 | None:intergenic | 20.0% |
| !! | TAAATACTATCTTAGGATTT+GGG | + | chr5.2:34149174-34149193 | None:intergenic | 20.0% |
| !! | TAAGATAAATTAGACATCAT+GGG | - | chr5.2:34149592-34149611 | MS.gene55397:intron | 20.0% |
| !! | TATAGAAAGGGAAAATTAAT+GGG | + | chr5.2:34144693-34144712 | None:intergenic | 20.0% |
| !! | TGTATATAAAAATATTGGCA+TGG | - | chr5.2:34148911-34148930 | MS.gene55397:intron | 20.0% |
| !! | TGTCTAATTTATCTTAAACT+TGG | + | chr5.2:34149588-34149607 | None:intergenic | 20.0% |
| !! | TTAAGATAAATTAGACATCA+TGG | - | chr5.2:34149591-34149610 | MS.gene55397:intron | 20.0% |
| !! | TTATAGAAAGGGAAAATTAA+TGG | + | chr5.2:34144694-34144713 | None:intergenic | 20.0% |
| !! | TTTATATCATGTTTAAACCA+TGG | - | chr5.2:34147747-34147766 | MS.gene55397:intron | 20.0% |
| !!! | CAATTAATTCATTTGTTGTT+TGG | - | chr5.2:34148106-34148125 | MS.gene55397:intron | 20.0% |
| !!! | CAGTGTAAGTATTTTTTAAT+TGG | - | chr5.2:34144907-34144926 | MS.gene55397:intron | 20.0% |
| !!! | CTTACAATTATAGTGTTTTT+TGG | + | chr5.2:34145256-34145275 | None:intergenic | 20.0% |
| !!! | CTTCATATATCTTTTTTTTG+TGG | + | chr5.2:34146771-34146790 | None:intergenic | 20.0% |
| !!! | GCTATATGTTGATTTTAATT+AGG | - | chr5.2:34148432-34148451 | MS.gene55397:intron | 20.0% |
| !!! | GCTTTTATCAACATATAAAA+AGG | + | chr5.2:34146479-34146498 | None:intergenic | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr5.2:34149666-34149685 | MS.gene55397:intron | 20.0% |
| !!! | TTTGTTTTGAGAGTTTATAT+TGG | - | chr5.2:34149061-34149080 | MS.gene55397:intron | 20.0% |
| !!! | TTTTCATATAAACTATAAGC+TGG | - | chr5.2:34145775-34145794 | MS.gene55397:intron | 20.0% |
| !!! | TTTTTTTGTTTTTTGAGCAA+TGG | - | chr5.2:34146218-34146237 | MS.gene55397:intron | 20.0% |
| ! | AAACTCAAATATTATACGGA+AGG | + | chr5.2:34150163-34150182 | None:intergenic | 25.0% |
| ! | AAACTTTGTTAAATTGCCTA+TGG | - | chr5.2:34148044-34148063 | MS.gene55397:intron | 25.0% |
| ! | AAATACTATCTTAGGATTTG+GGG | + | chr5.2:34149173-34149192 | None:intergenic | 25.0% |
| ! | AACTCAAATATTATACGGAA+GGG | + | chr5.2:34150162-34150181 | None:intergenic | 25.0% |
| ! | AAGAAATATTGTTACAGACT+AGG | + | chr5.2:34146932-34146951 | None:intergenic | 25.0% |
| ! | AATTCTGTTAGAATGATTCT+CGG | - | chr5.2:34148199-34148218 | MS.gene55397:intron | 25.0% |
| ! | ACATAAGCAATAATAGGATA+AGG | + | chr5.2:34145724-34145743 | None:intergenic | 25.0% |
| ! | ACTATCTATTCTTACACATA+TGG | + | chr5.2:34149032-34149051 | None:intergenic | 25.0% |
| ! | ACTATTATTTCAACAAGCTA+TGG | + | chr5.2:34144788-34144807 | None:intergenic | 25.0% |
| ! | ACTCCATATTACAAAATCAT+TGG | + | chr5.2:34145339-34145358 | None:intergenic | 25.0% |
| ! | AGTATTTATAGGTAACATGA+CGG | - | chr5.2:34150290-34150309 | MS.gene55397:intron | 25.0% |
| ! | AGTCTTCATTAGATGTAATA+TGG | - | chr5.2:34149287-34149306 | MS.gene55397:intron | 25.0% |
| ! | AGTTATATCAGAAAAGCTAA+AGG | + | chr5.2:34148170-34148189 | None:intergenic | 25.0% |
| ! | ATATATTGAACTCTCAACAT+GGG | - | chr5.2:34145395-34145414 | MS.gene55397:intron | 25.0% |
| ! | ATCAAACCTAAAACCAAAAT+TGG | + | chr5.2:34150057-34150076 | None:intergenic | 25.0% |
| ! | ATTGTGCGTTATATATTAAC+TGG | - | chr5.2:34146668-34146687 | MS.gene55397:intron | 25.0% |
| ! | CAAATATATCAAACAAAGAG+AGG | + | chr5.2:34149488-34149507 | None:intergenic | 25.0% |
| ! | CATAAGCAATAATAGGATAA+GGG | + | chr5.2:34145723-34145742 | None:intergenic | 25.0% |
| ! | CCAGTTAGAAATTATAGAAA+GGG | + | chr5.2:34144705-34144724 | None:intergenic | 25.0% |
| ! | CCTTTCTATAATTTCTAACT+GGG | - | chr5.2:34144703-34144722 | MS.gene55397:CDS | 25.0% |
| ! | CTAAATACTATCTTAGGATT+TGG | + | chr5.2:34149175-34149194 | None:intergenic | 25.0% |
| ! | CTAAATTATCAGCATAGATA+GGG | + | chr5.2:34146863-34146882 | None:intergenic | 25.0% |
| ! | CTATTATTTCAACAAGCTAT+GGG | + | chr5.2:34144787-34144806 | None:intergenic | 25.0% |
| ! | GAAAAACATTTATAAATGGG+AGG | - | chr5.2:34149100-34149119 | MS.gene55397:intron | 25.0% |
| ! | GACAACAATTTAATGAGAAA+AGG | + | chr5.2:34146721-34146740 | None:intergenic | 25.0% |
| ! | GCTGAAAATAAAAACAAAAC+AGG | + | chr5.2:34147255-34147274 | None:intergenic | 25.0% |
| ! | TAAATTATCAGCATAGATAG+GGG | + | chr5.2:34146862-34146881 | None:intergenic | 25.0% |
| ! | TAAGGTCTAAATACTATCTT+AGG | + | chr5.2:34149181-34149200 | None:intergenic | 25.0% |
| ! | TCATCCATTAATGATACTTA+CGG | + | chr5.2:34146188-34146207 | None:intergenic | 25.0% |
| ! | TCTTTAATTAGAGATGAATC+TGG | + | chr5.2:34148529-34148548 | None:intergenic | 25.0% |
| ! | TTATAAATAGATGCAGTGTT+CGG | - | chr5.2:34145993-34146012 | MS.gene55397:intron | 25.0% |
| ! | TTCTAGTATAACAGTTACAA+AGG | + | chr5.2:34145298-34145317 | None:intergenic | 25.0% |
| !! | AAATGTAAAATCTTTGGTGT+GGG | - | chr5.2:34149250-34149269 | MS.gene55397:intron | 25.0% |
| !! | AATTCTTAACAAGGTTGATT+TGG | - | chr5.2:34147023-34147042 | MS.gene55397:intron | 25.0% |
| !! | AGTTAGATGAAGTATCAATT+AGG | - | chr5.2:34149900-34149919 | MS.gene55397:intron | 25.0% |
| !! | ATATTTTCAGATAGCATTTG+CGG | - | chr5.2:34146643-34146662 | MS.gene55397:intron | 25.0% |
| !! | CCCATTTATAAATGTTTTTC+AGG | + | chr5.2:34149100-34149119 | None:intergenic | 25.0% |
| !! | TCTTGTTAATTTTGTGATAG+TGG | - | chr5.2:34146446-34146465 | MS.gene55397:intron | 25.0% |
| !! | TTTAGGTATTTTGTGTTTGT+AGG | - | chr5.2:34146050-34146069 | MS.gene55397:intron | 25.0% |
| !!! | AAAAACAGAATTTTAAGGCA+AGG | + | chr5.2:34149130-34149149 | None:intergenic | 25.0% |
| !!! | AAAACAGAATTTTAAGGCAA+GGG | + | chr5.2:34149129-34149148 | None:intergenic | 25.0% |
| !!! | AAAGAGCATTGATAAATGAA+GGG | - | chr5.2:34145467-34145486 | MS.gene55397:intron | 25.0% |
| !!! | ATTTATTTCTATAAGCTCTC+TGG | + | chr5.2:34145815-34145834 | None:intergenic | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | - | chr5.2:34149665-34149684 | MS.gene55397:intron | 25.0% |
| !!! | TAATACATAGATGGTGTTAT+TGG | + | chr5.2:34149458-34149477 | None:intergenic | 25.0% |
| !!! | TTTATTTCTATAAGCTCTCT+GGG | + | chr5.2:34145814-34145833 | None:intergenic | 25.0% |
| AAAACAAAACAGGTAAACTG+CGG | + | chr5.2:34147245-34147264 | None:intergenic | 30.0% | |
| AAAGAAGATGTCCTAATCAA+TGG | - | chr5.2:34150394-34150413 | MS.gene55397:CDS | 30.0% | |
| AACAGAAGATTGTTGAGAAA+TGG | + | chr5.2:34144621-34144640 | None:intergenic | 30.0% | |
| AACAGTATCATTTGTTTGAC+AGG | + | chr5.2:34146337-34146356 | None:intergenic | 30.0% | |
| AATATTGTTACAGACTAGGT+AGG | + | chr5.2:34146928-34146947 | None:intergenic | 30.0% | |
| AATTAAGTTTGCATTCGCAT+TGG | - | chr5.2:34147940-34147959 | MS.gene55397:CDS | 30.0% | |
| ACAGTATCATTTGTTTGACA+GGG | + | chr5.2:34146336-34146355 | None:intergenic | 30.0% | |
| ACTAAAAAGCTTCATGATAG+TGG | - | chr5.2:34147322-34147341 | MS.gene55397:intron | 30.0% | |
| ACTCAAATATTATACGGAAG+GGG | + | chr5.2:34150161-34150180 | None:intergenic | 30.0% | |
| AGTAGAGTAACAATTGAGTT+TGG | - | chr5.2:34149359-34149378 | MS.gene55397:intron | 30.0% | |
| AGTATGCTAAAAGAGAAACA+AGG | - | chr5.2:34148558-34148577 | MS.gene55397:intron | 30.0% | |
| ATATTGTTACAGACTAGGTA+GGG | + | chr5.2:34146927-34146946 | None:intergenic | 30.0% | |
| ATTGTCCAAGAAATAGTTCT+TGG | - | chr5.2:34146378-34146397 | MS.gene55397:intron | 30.0% | |
| ATTTAGTCAAAAAGATCCCT+TGG | - | chr5.2:34148597-34148616 | MS.gene55397:intron | 30.0% | |
| ATTTCTCAACAATCTTCTGT+TGG | - | chr5.2:34144620-34144639 | MS.gene55397:intron | 30.0% | |
| CAAATGTAAAATCTTTGGTG+TGG | - | chr5.2:34149249-34149268 | MS.gene55397:intron | 30.0% | |
| CATATAGCAATACCTATTGA+AGG | + | chr5.2:34148420-34148439 | None:intergenic | 30.0% | |
| CATATATTGAACTCTCAACA+TGG | - | chr5.2:34145394-34145413 | MS.gene55397:intron | 30.0% | |
| CCCAGTTAGAAATTATAGAA+AGG | + | chr5.2:34144706-34144725 | None:intergenic | 30.0% | |
| CCCTTTCTATAATTTCTAAC+TGG | - | chr5.2:34144702-34144721 | MS.gene55397:CDS | 30.0% | |
| CCTAAATTATCAGCATAGAT+AGG | + | chr5.2:34146864-34146883 | None:intergenic | 30.0% | |
| CCTATCTATGCTGATAATTT+AGG | - | chr5.2:34146861-34146880 | MS.gene55397:intron | 30.0% | |
| CGCACTAGAAATTTAAACAT+TGG | - | chr5.2:34145635-34145654 | MS.gene55397:intron | 30.0% | |
| CGCTTCAAATGTAAAATCTT+TGG | - | chr5.2:34149244-34149263 | MS.gene55397:intron | 30.0% | |
| GAAAACTCACATACAAGTTA+GGG | + | chr5.2:34145159-34145178 | None:intergenic | 30.0% | |
| GGACATTGTAATTCTTAACA+AGG | - | chr5.2:34147014-34147033 | MS.gene55397:intron | 30.0% | |
| GGAGAATGTTAATACATAGA+TGG | + | chr5.2:34149467-34149486 | None:intergenic | 30.0% | |
| GTATTTATAGGTAACATGAC+GGG | - | chr5.2:34150291-34150310 | MS.gene55397:intron | 30.0% | |
| GTTGTAGAATCTACAATCTA+GGG | + | chr5.2:34148087-34148106 | None:intergenic | 30.0% | |
| TACTAAGCTATTCCTTCAAT+AGG | - | chr5.2:34148405-34148424 | MS.gene55397:intron | 30.0% | |
| TACTTGATTAGAAGCTATAC+AGG | + | chr5.2:34147469-34147488 | None:intergenic | 30.0% | |
| TAGAAAATGCCGAAATTGTT+AGG | - | chr5.2:34145112-34145131 | MS.gene55397:intron | 30.0% | |
| TCATTTAAGTGAAGCAAAAG+CGG | + | chr5.2:34147601-34147620 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | - | chr5.2:34149650-34149669 | MS.gene55397:intron | 30.0% | |
| TCTAGTTAAGTTCGAACTTA+TGG | + | chr5.2:34145096-34145115 | None:intergenic | 30.0% | |
| TGAAAACTCACATACAAGTT+AGG | + | chr5.2:34145160-34145179 | None:intergenic | 30.0% | |
| TGCATTTAGTGTTAGGAAAA+TGG | - | chr5.2:34147525-34147544 | MS.gene55397:intron | 30.0% | |
| TGTTGTAGAATCTACAATCT+AGG | + | chr5.2:34148088-34148107 | None:intergenic | 30.0% | |
| TTAGAAGCTATACAGGAAAA+AGG | + | chr5.2:34147462-34147481 | None:intergenic | 30.0% | |
| TTGAAGGAATAGCTTAGTAT+AGG | + | chr5.2:34148404-34148423 | None:intergenic | 30.0% | |
| TTGGACTCATAATTACACTT+AGG | - | chr5.2:34145654-34145673 | MS.gene55397:intron | 30.0% | |
| TTGGGAGAAGAAATATGATA+TGG | - | chr5.2:34147799-34147818 | MS.gene55397:intron | 30.0% | |
| TTTAAAAATCTGGTTGGACA+TGG | - | chr5.2:34149413-34149432 | MS.gene55397:CDS | 30.0% | |
| TTTGGCAAAACAAAATCTTG+TGG | - | chr5.2:34149826-34149845 | MS.gene55397:intron | 30.0% | |
| TTTGTTGAAGAAGCCAAAAT+TGG | + | chr5.2:34150091-34150110 | None:intergenic | 30.0% | |
| ! | ACATTTTATAGTACCTGTCA+TGG | - | chr5.2:34146403-34146422 | MS.gene55397:intron | 30.0% |
| ! | AGACCTTATTTAAGATCTCT+TGG | - | chr5.2:34149193-34149212 | MS.gene55397:intron | 30.0% |
| ! | CAACACTTTAAAAATCTGGT+TGG | - | chr5.2:34149407-34149426 | MS.gene55397:CDS | 30.0% |
| ! | CTAGCAACACTTTAAAAATC+TGG | - | chr5.2:34149403-34149422 | MS.gene55397:CDS | 30.0% |
| ! | CTTTACAGTTATAGCGTTTT+TGG | - | chr5.2:34144877-34144896 | MS.gene55397:intron | 30.0% |
| ! | TATTTCTTGGACAATTTTGC+GGG | + | chr5.2:34146373-34146392 | None:intergenic | 30.0% |
| ! | TTTTTGGATGATAGATGAAG+TGG | + | chr5.2:34145194-34145213 | None:intergenic | 30.0% |
| !! | AAGAGCATTGATAAATGAAG+GGG | - | chr5.2:34145468-34145487 | MS.gene55397:intron | 30.0% |
| !! | CTATTTCTTGGACAATTTTG+CGG | + | chr5.2:34146374-34146393 | None:intergenic | 30.0% |
| !! | GAAAGAGCATTGATAAATGA+AGG | - | chr5.2:34145466-34145485 | MS.gene55397:intron | 30.0% |
| !! | TGTAATATGGAGTTCTGAAT+TGG | - | chr5.2:34145346-34145365 | MS.gene55397:intron | 30.0% |
| !!! | TCTTTTTCAAACAGTAACAG+TGG | + | chr5.2:34147968-34147987 | None:intergenic | 30.0% |
| AAATTGCAAACCCTTATACG+AGG | + | chr5.2:34148814-34148833 | None:intergenic | 35.0% | |
| AACCAAAGAATAGATGCCAA+AGG | + | chr5.2:34146121-34146140 | None:intergenic | 35.0% | |
| AACCGTCTAACTGTATTATC+TGG | + | chr5.2:34148324-34148343 | None:intergenic | 35.0% | |
| AAGCACTTGTGAGATTCTTA+GGG | + | chr5.2:34145883-34145902 | None:intergenic | 35.0% | |
| AATATTAACTACCCATACCG+AGG | + | chr5.2:34149798-34149817 | None:intergenic | 35.0% | |
| ACTCTACTTATAACCAGCTA+AGG | + | chr5.2:34149347-34149366 | None:intergenic | 35.0% | |
| AGTGGAAGAAAGAAGAAAAC+AGG | - | chr5.2:34150256-34150275 | MS.gene55397:intron | 35.0% | |
| ATTACAAAATCATTGGCCGA+GGG | + | chr5.2:34145332-34145351 | None:intergenic | 35.0% | |
| CAGTAGTTTCCAGCAATATA+TGG | + | chr5.2:34146081-34146100 | None:intergenic | 35.0% | |
| CATACTTCAGTAATCTTGAC+AGG | - | chr5.2:34148020-34148039 | MS.gene55397:intron | 35.0% | |
| CATATATTGCTGGAAACTAC+TGG | - | chr5.2:34146079-34146098 | MS.gene55397:intron | 35.0% | |
| CTACGAGTGTGTTAATGTTA+TGG | + | chr5.2:34147095-34147114 | None:intergenic | 35.0% | |
| CTCAAATATTATACGGAAGG+GGG | + | chr5.2:34150160-34150179 | None:intergenic | 35.0% | |
| CTGTCAAGATTACTGAAGTA+TGG | + | chr5.2:34148022-34148041 | None:intergenic | 35.0% | |
| GCTATCTGAAAATATGCTTC+AGG | + | chr5.2:34146638-34146657 | None:intergenic | 35.0% | |
| GCTGTGATATTGAATGAGTT+TGG | - | chr5.2:34145427-34145446 | MS.gene55397:intron | 35.0% | |
| GGTATGGGTAGTTAATATTG+TGG | - | chr5.2:34149799-34149818 | MS.gene55397:intron | 35.0% | |
| GGTCCAAGAGATCTTAAATA+AGG | + | chr5.2:34149199-34149218 | None:intergenic | 35.0% | |
| GTCACCGTAAGTATCATTAA+TGG | - | chr5.2:34146181-34146200 | MS.gene55397:intron | 35.0% | |
| TAACAATGCCTCTAAATGTG+CGG | + | chr5.2:34147281-34147300 | None:intergenic | 35.0% | |
| TAAGCACTTGTGAGATTCTT+AGG | + | chr5.2:34145884-34145903 | None:intergenic | 35.0% | |
| TATTACAAAATCATTGGCCG+AGG | + | chr5.2:34145333-34145352 | None:intergenic | 35.0% | |
| TCATGCGCTATCAATTAACT+GGG | + | chr5.2:34148889-34148908 | None:intergenic | 35.0% | |
| TCTATCAAACTCTCATCACA+AGG | + | chr5.2:34148754-34148773 | None:intergenic | 35.0% | |
| TGATGAATTGCATACTTTGC+AGG | - | chr5.2:34147862-34147881 | MS.gene55397:CDS | 35.0% | |
| TGCCAGATAATACAGTTAGA+CGG | - | chr5.2:34148319-34148338 | MS.gene55397:intron | 35.0% | |
| TGCGTTATGCATTTAGTGTT+AGG | - | chr5.2:34147518-34147537 | MS.gene55397:intron | 35.0% | |
| TGGAACAGTTGATCTTGATA+AGG | - | chr5.2:34147372-34147391 | MS.gene55397:intron | 35.0% | |
| TGTGATCAGAACGATATCAA+AGG | + | chr5.2:34148376-34148395 | None:intergenic | 35.0% | |
| TTGATAAATGAAGGGGAAAG+TGG | - | chr5.2:34145475-34145494 | MS.gene55397:intron | 35.0% | |
| TTGCACTGTTAAGCATAGTT+TGG | - | chr5.2:34145543-34145562 | MS.gene55397:intron | 35.0% | |
| TTTGGCATCTATTCTTTGGT+TGG | - | chr5.2:34146120-34146139 | MS.gene55397:intron | 35.0% | |
| ! | AATGAGTTTGGTGAGGAAAT+TGG | - | chr5.2:34145439-34145458 | MS.gene55397:intron | 35.0% |
| ! | AATTGTGTTTCTACCGAAGT+AGG | - | chr5.2:34146553-34146572 | MS.gene55397:intron | 35.0% |
| ! | AATTTTACATGCCTAACCAC+TGG | + | chr5.2:34147905-34147924 | None:intergenic | 35.0% |
| ! | ATAATGTTGCTGCTTCTTTC+AGG | - | chr5.2:34146993-34147012 | MS.gene55397:intron | 35.0% |
| ! | ATTAGTTTGAATGCCATGAC+AGG | + | chr5.2:34146419-34146438 | None:intergenic | 35.0% |
| ! | CAATCTTGAACGTTTTCACA+TGG | + | chr5.2:34149004-34149023 | None:intergenic | 35.0% |
| ! | CATTTAAGACTCCTTTGCAA+CGG | + | chr5.2:34147832-34147851 | None:intergenic | 35.0% |
| ! | CGGCCAATGATTTTGTAATA+TGG | - | chr5.2:34145333-34145352 | MS.gene55397:intron | 35.0% |
| ! | GATATTGAATGAGTTTGGTG+AGG | - | chr5.2:34145432-34145451 | MS.gene55397:intron | 35.0% |
| ! | TGTCTCCAAGAACTATTTCT+TGG | + | chr5.2:34146386-34146405 | None:intergenic | 35.0% |
| ! | TTGCTAGCTCTTGGAATTTA+GGG | + | chr5.2:34149390-34149409 | None:intergenic | 35.0% |
| !! | CTTGTATGTGAGTTTTCAAG+TGG | - | chr5.2:34145162-34145181 | MS.gene55397:intron | 35.0% |
| !! | GCACTCACTCTTTTATTTGA+TGG | + | chr5.2:34149743-34149762 | None:intergenic | 35.0% |
| !! | TTTAAAGTGTTGCTAGCTCT+TGG | + | chr5.2:34149399-34149418 | None:intergenic | 35.0% |
| !!! | AGTGTGCCAATTTTGGTTTT+AGG | - | chr5.2:34150048-34150067 | MS.gene55397:intron | 35.0% |
| !!! | GTTTTAGGTTTGATTCTACC+CGG | - | chr5.2:34150063-34150082 | MS.gene55397:intron | 35.0% |
| AAATATTGGCATGGTAGCAG+TGG | - | chr5.2:34148920-34148939 | MS.gene55397:intron | 40.0% | |
| AACAACGATTCCTGCTAACA+CGG | - | chr5.2:34147560-34147579 | MS.gene55397:intron | 40.0% | |
| AACATCCTCTTGCAAATGCA+AGG | - | chr5.2:34148685-34148704 | MS.gene55397:intron | 40.0% | |
| ACCAAAATTGGCACACTCTA+AGG | + | chr5.2:34150045-34150064 | None:intergenic | 40.0% | |
| ACGTCAAGGACTAAAAGCAA+CGG | + | chr5.2:34144958-34144977 | None:intergenic | 40.0% | |
| ACTTATAACCAGCTAAGGCA+AGG | + | chr5.2:34149342-34149361 | None:intergenic | 40.0% | |
| AGCTTGTGCAGAGAAAAGAA+AGG | - | chr5.2:34145581-34145600 | MS.gene55397:intron | 40.0% | |
| AGGTCCATTGCATAATGTTG+CGG | - | chr5.2:34145939-34145958 | MS.gene55397:intron | 40.0% | |
| ATACAGTTAGACGGTTACAC+AGG | - | chr5.2:34148328-34148347 | MS.gene55397:CDS | 40.0% | |
| ATCACTTATCGGTGAAATCC+TGG | - | chr5.2:34150193-34150212 | MS.gene55397:intron | 40.0% | |
| ATCATTGTGGGTCTACACAT+TGG | - | chr5.2:34149678-34149697 | MS.gene55397:intron | 40.0% | |
| ATGGATGTATACCGTTGCAA+AGG | - | chr5.2:34147818-34147837 | MS.gene55397:CDS | 40.0% | |
| ATGGCTAGAGGAGATTCTTT+GGG | - | chr5.2:34147781-34147800 | MS.gene55397:intron | 40.0% | |
| CACCTTTGGCATCTATTCTT+TGG | - | chr5.2:34146116-34146135 | MS.gene55397:intron | 40.0% | |
| CATAGATAGGGGAAGATACT+TGG | + | chr5.2:34146851-34146870 | None:intergenic | 40.0% | |
| CTCAATATAATCGCAACACG+CGG | + | chr5.2:34145000-34145019 | None:intergenic | 40.0% | |
| CTCATGCGCTATCAATTAAC+TGG | + | chr5.2:34148890-34148909 | None:intergenic | 40.0% | |
| CTGAAAGTAGACAGAACCAT+AGG | + | chr5.2:34148063-34148082 | None:intergenic | 40.0% | |
| CTTATAACCAGCTAAGGCAA+GGG | + | chr5.2:34149341-34149360 | None:intergenic | 40.0% | |
| GAAATAAATGCAGCCCACTT+GGG | - | chr5.2:34149994-34150013 | MS.gene55397:intron | 40.0% | |
| GAAATAGAACCCACACAAAG+TGG | - | chr5.2:34149700-34149719 | MS.gene55397:intron | 40.0% | |
| GAGGTGAAGAGTCTATCTAT+AGG | - | chr5.2:34148232-34148251 | MS.gene55397:intron | 40.0% | |
| GATGAGAGTTTGATAGAGCA+AGG | - | chr5.2:34148757-34148776 | MS.gene55397:intron | 40.0% | |
| GGCATTCAGCCTAACAATTT+CGG | + | chr5.2:34145124-34145143 | None:intergenic | 40.0% | |
| TACAGTTAGACGGTTACACA+GGG | - | chr5.2:34148329-34148348 | MS.gene55397:CDS | 40.0% | |
| TAGGCTAGACCATATATTGC+TGG | - | chr5.2:34146069-34146088 | MS.gene55397:intron | 40.0% | |
| TAGTCACACACCTCGTATAA+GGG | - | chr5.2:34148801-34148820 | MS.gene55397:intron | 40.0% | |
| TATACGAGATTGTTCCTGCT+CGG | - | chr5.2:34150232-34150251 | MS.gene55397:intron | 40.0% | |
| TATGGCTAGAGGAGATTCTT+TGG | - | chr5.2:34147780-34147799 | MS.gene55397:intron | 40.0% | |
| TCAGATAAGGTAATCCAAGC+AGG | - | chr5.2:34145919-34145938 | MS.gene55397:intron | 40.0% | |
| TCTTTGGTTGGATGAACAGT+TGG | - | chr5.2:34146132-34146151 | MS.gene55397:intron | 40.0% | |
| TGAAATAAATGCAGCCCACT+TGG | - | chr5.2:34149993-34150012 | MS.gene55397:intron | 40.0% | |
| TGAACCGCAACATTATGCAA+TGG | + | chr5.2:34145946-34145965 | None:intergenic | 40.0% | |
| TGGTGCAGTTGTTGAAGAAT+GGG | - | chr5.2:34145495-34145514 | MS.gene55397:intron | 40.0% | |
| TGTTGAATCTCAACAGCAAG+AGG | + | chr5.2:34144581-34144600 | None:intergenic | 40.0% | |
| TTAGACATCATGGGTATGAG+TGG | - | chr5.2:34149601-34149620 | MS.gene55397:intron | 40.0% | |
| TTGGCATCTACTACCTACTT+CGG | + | chr5.2:34146569-34146588 | None:intergenic | 40.0% | |
| ! | ACAGACTAGGTAGGGTATTA+TGG | + | chr5.2:34146919-34146938 | None:intergenic | 40.0% |
| ! | ACCTTAGAGTGTGCCAATTT+TGG | - | chr5.2:34150041-34150060 | MS.gene55397:intron | 40.0% |
| ! | ACTCTCATCACTGGTTATCT+TGG | - | chr5.2:34144647-34144666 | MS.gene55397:intron | 40.0% |
| ! | AGAACAAAGCATTCTCTGCT+AGG | + | chr5.2:34147664-34147683 | None:intergenic | 40.0% |
| ! | AGCTCTTGGAATTTAGGGTT+TGG | + | chr5.2:34149385-34149404 | None:intergenic | 40.0% |
| ! | CTAGTGGATAAGCTCAGATA+AGG | - | chr5.2:34145906-34145925 | MS.gene55397:intron | 40.0% |
| ! | GAGCTTTCAAGCCATTGATT+AGG | + | chr5.2:34150408-34150427 | None:intergenic | 40.0% |
| ! | GATTCTCGGTTAGTTACATG+AGG | - | chr5.2:34148213-34148232 | MS.gene55397:intron | 40.0% |
| ! | GTTGCTAGCTCTTGGAATTT+AGG | + | chr5.2:34149391-34149410 | None:intergenic | 40.0% |
| !! | AGCAGTGGTGTTACTTTGTT+AGG | - | chr5.2:34148935-34148954 | MS.gene55397:intron | 40.0% |
| !! | GAATGGGTTGAACTTGCTAA+TGG | - | chr5.2:34145511-34145530 | MS.gene55397:intron | 40.0% |
| !! | GGAAAATTAATGGGTTACCG+TGG | + | chr5.2:34144684-34144703 | None:intergenic | 40.0% |
| !! | GTTGATTTGGTATCTGCAGA+AGG | - | chr5.2:34147036-34147055 | MS.gene55397:intron | 40.0% |
| !!! | ACAGAATTTTAAGGCAAGGG+AGG | + | chr5.2:34149126-34149145 | None:intergenic | 40.0% |
| AAATGTTCGCTTCCAGCTCA+AGG | - | chr5.2:34146589-34146608 | MS.gene55397:intron | 45.0% | |
| AACCATGGCAGACTCGTATA+TGG | - | chr5.2:34147762-34147781 | MS.gene55397:intron | 45.0% | |
| AAGAAGCCAAAATTGGCACC+GGG | + | chr5.2:34150084-34150103 | None:intergenic | 45.0% | |
| AAGTTAGGGATCCCAAGTCA+TGG | + | chr5.2:34145145-34145164 | None:intergenic | 45.0% | |
| AATCACGCACTTGTGTACTG+AGG | + | chr5.2:34146511-34146530 | None:intergenic | 45.0% | |
| ACAACGATTCCTGCTAACAC+GGG | - | chr5.2:34147561-34147580 | MS.gene55397:intron | 45.0% | |
| ACCATATGCATCAGTGAGAC+TGG | - | chr5.2:34147352-34147371 | MS.gene55397:intron | 45.0% | |
| ACTCCCAACAGTTATGCCAA+GGG | + | chr5.2:34148616-34148635 | None:intergenic | 45.0% | |
| AGATCCCTTGGCATAACTGT+TGG | - | chr5.2:34148609-34148628 | MS.gene55397:intron | 45.0% | |
| AGATTCTTAGGGAGAGCTCA+TGG | + | chr5.2:34145872-34145891 | None:intergenic | 45.0% | |
| AGTCCTTGACGTCAGCTTAT+TGG | - | chr5.2:34144966-34144985 | MS.gene55397:intron | 45.0% | |
| ATAAGATCCGTCTTCACCAG+TGG | - | chr5.2:34147886-34147905 | MS.gene55397:CDS | 45.0% | |
| ATAGAACCCACACAAAGTGG+TGG | - | chr5.2:34149703-34149722 | MS.gene55397:intron | 45.0% | |
| ATTGCTGGAAACTACTGGTG+TGG | - | chr5.2:34146084-34146103 | MS.gene55397:intron | 45.0% | |
| CAGGAAATGAAGATGAGCCA+CGG | + | chr5.2:34146619-34146638 | None:intergenic | 45.0% | |
| CATTATGCAATGGACCTGCT+TGG | + | chr5.2:34145936-34145955 | None:intergenic | 45.0% | |
| CCTCTTGCAAATGCAAGGTA+AGG | - | chr5.2:34148690-34148709 | MS.gene55397:intron | 45.0% | |
| CCTTACCTTGCATTTGCAAG+AGG | + | chr5.2:34148693-34148712 | None:intergenic | 45.0% | |
| CGACAATGTCAAACCTGTCA+CGG | + | chr5.2:34148728-34148747 | None:intergenic | 45.0% | |
| CTAGTCACACACCTCGTATA+AGG | - | chr5.2:34148800-34148819 | MS.gene55397:intron | 45.0% | |
| CTCACAAGTGCTTATGCTAG+TGG | - | chr5.2:34145890-34145909 | MS.gene55397:intron | 45.0% | |
| CTCTTGGACCACCAGTTATA+GGG | - | chr5.2:34149209-34149228 | MS.gene55397:intron | 45.0% | |
| GAAAGCTCTTGCAACCTGTT+AGG | - | chr5.2:34150420-34150439 | MS.gene55397:CDS | 45.0% | |
| GAAGAAGCCAAAATTGGCAC+CGG | + | chr5.2:34150085-34150104 | None:intergenic | 45.0% | |
| GATCCCTTGGCATAACTGTT+GGG | - | chr5.2:34148610-34148629 | MS.gene55397:intron | 45.0% | |
| GCATTCTCTGCTAGGCATTA+CGG | + | chr5.2:34147656-34147675 | None:intergenic | 45.0% | |
| GGACTAAAAGCAACGGAGTT+TGG | + | chr5.2:34144951-34144970 | None:intergenic | 45.0% | |
| GTCCTTGACGTCAGCTTATT+GGG | - | chr5.2:34144967-34144986 | MS.gene55397:intron | 45.0% | |
| GTGGTGCAGTTGTTGAAGAA+TGG | - | chr5.2:34145494-34145513 | MS.gene55397:intron | 45.0% | |
| TAAACTGCGGTCATGAAGGT+GGG | + | chr5.2:34147232-34147251 | None:intergenic | 45.0% | |
| TAGAACCCACACAAAGTGGT+GGG | - | chr5.2:34149704-34149723 | MS.gene55397:intron | 45.0% | |
| TAGGCTGAATGCCATGACTT+GGG | - | chr5.2:34145131-34145150 | MS.gene55397:intron | 45.0% | |
| TATGTCCCACCACTTTGTGT+GGG | + | chr5.2:34149712-34149731 | None:intergenic | 45.0% | |
| TATTTATGCCCCGTGTTAGC+AGG | + | chr5.2:34147573-34147592 | None:intergenic | 45.0% | |
| TCCAGTCTCACTGATGCATA+TGG | + | chr5.2:34147356-34147375 | None:intergenic | 45.0% | |
| TCTCTTGGACCACCAGTTAT+AGG | - | chr5.2:34149208-34149227 | MS.gene55397:intron | 45.0% | |
| TGAACTCTCAACATGGGAAG+AGG | - | chr5.2:34145401-34145420 | MS.gene55397:intron | 45.0% | |
| TGAATCTCAACAGCAAGAGG+TGG | + | chr5.2:34144578-34144597 | None:intergenic | 45.0% | |
| TTACTGCAGTATCGTAAGCG+TGG | + | chr5.2:34147170-34147189 | None:intergenic | 45.0% | |
| TTAGGCTGAATGCCATGACT+TGG | - | chr5.2:34145130-34145149 | MS.gene55397:intron | 45.0% | |
| TTGCTAGCATTCCTCGGTAT+GGG | - | chr5.2:34149784-34149803 | MS.gene55397:intron | 45.0% | |
| ! | AGAATAGATGCCAAAGGTGC+TGG | + | chr5.2:34146115-34146134 | None:intergenic | 45.0% |
| ! | ATCACTGGTTATCTTGGTGC+TGG | - | chr5.2:34144653-34144672 | MS.gene55397:intron | 45.0% |
| ! | GAGCTGGAAGCGAACATTTT+TGG | + | chr5.2:34146588-34146607 | None:intergenic | 45.0% |
| ! | GTTTGGTGAGGAAATTGGAG+TGG | - | chr5.2:34145444-34145463 | MS.gene55397:intron | 45.0% |
| ! | TAGAAGTGTGTTCGAACCCT+CGG | - | chr5.2:34145313-34145332 | MS.gene55397:intron | 45.0% |
| ! | TATCAAGTGAGAGTGTGAGC+TGG | - | chr5.2:34148960-34148979 | MS.gene55397:intron | 45.0% |
| ! | TGAGTGTTGCTAGCATTCCT+CGG | - | chr5.2:34149778-34149797 | MS.gene55397:intron | 45.0% |
| !! | ATTCTACCCGGTGCCAATTT+TGG | - | chr5.2:34150075-34150094 | MS.gene55397:intron | 45.0% |
| !!! | TTTTTTTTAGATTTTATTTT+TGG | + | chr5.2:34145210-34145229 | None:intergenic | 5.0% |
| ACCAGTTATAGGGCCACTCA+GGG | - | chr5.2:34149219-34149238 | MS.gene55397:intron | 50.0% | |
| AGATGCAGTGTTCGGCAAAG+TGG | - | chr5.2:34146001-34146020 | MS.gene55397:intron | 50.0% | |
| AGATTGTTCCTGCTCGGAAG+TGG | - | chr5.2:34150238-34150257 | MS.gene55397:intron | 50.0% | |
| AGCCATATACGAGTCTGCCA+TGG | + | chr5.2:34147767-34147786 | None:intergenic | 50.0% | |
| AGGTGTGTGACTAGACTGTG+TGG | + | chr5.2:34148794-34148813 | None:intergenic | 50.0% | |
| ATCCGTCTTCACCAGTGGTT+AGG | - | chr5.2:34147891-34147910 | MS.gene55397:CDS | 50.0% | |
| CAACGATTCCTGCTAACACG+GGG | - | chr5.2:34147562-34147581 | MS.gene55397:intron | 50.0% | |
| CAGGTAAACTGCGGTCATGA+AGG | + | chr5.2:34147236-34147255 | None:intergenic | 50.0% | |
| CTTATCGGTGAAATCCTGGC+AGG | - | chr5.2:34150197-34150216 | MS.gene55397:intron | 50.0% | |
| GACGTCAGCTTATTGGGCAT+TGG | - | chr5.2:34144973-34144992 | MS.gene55397:intron | 50.0% | |
| GACTCCCAACAGTTATGCCA+AGG | + | chr5.2:34148617-34148636 | None:intergenic | 50.0% | |
| GATGCAGTGTTCGGCAAAGT+GGG | - | chr5.2:34146002-34146021 | MS.gene55397:intron | 50.0% | |
| GCAGACTCGTATATGGCTAG+AGG | - | chr5.2:34147769-34147788 | MS.gene55397:intron | 50.0% | |
| GGCATTGTCTTGTGCATGCA+CGG | - | chr5.2:34150312-34150331 | MS.gene55397:CDS | 50.0% | |
| GTAAACTGCGGTCATGAAGG+TGG | + | chr5.2:34147233-34147252 | None:intergenic | 50.0% | |
| GTATGTCCCACCACTTTGTG+TGG | + | chr5.2:34149713-34149732 | None:intergenic | 50.0% | |
| GTCAGCAACTCCTAGATGAC+TGG | - | chr5.2:34148292-34148311 | MS.gene55397:intron | 50.0% | |
| GTTGCTAGCATTCCTCGGTA+TGG | - | chr5.2:34149783-34149802 | MS.gene55397:intron | 50.0% | |
| TAAATGCAGCCCACTTGGGT+TGG | - | chr5.2:34149998-34150017 | MS.gene55397:intron | 50.0% | |
| TCAGCATGCCGCACATTTAG+AGG | - | chr5.2:34147270-34147289 | MS.gene55397:intron | 50.0% | |
| TCTCTGCACAAGCTGCTCAA+GGG | + | chr5.2:34145575-34145594 | None:intergenic | 50.0% | |
| TCTTTCTTCCACTTCCGAGC+AGG | + | chr5.2:34150249-34150268 | None:intergenic | 50.0% | |
| TGCCCAATAAGCTGACGTCA+AGG | + | chr5.2:34144972-34144991 | None:intergenic | 50.0% | |
| TGCCTAACCACTGGTGAAGA+CGG | + | chr5.2:34147896-34147915 | None:intergenic | 50.0% | |
| TGTGGCTAATCCAGCACCTT+TGG | - | chr5.2:34146102-34146121 | MS.gene55397:intron | 50.0% | |
| TTCTCTGCACAAGCTGCTCA+AGG | + | chr5.2:34145576-34145595 | None:intergenic | 50.0% | |
| TTGGTATCTGCAGAAGGCTC+TGG | - | chr5.2:34147042-34147061 | MS.gene55397:intron | 50.0% | |
| ! | CATTTGAAGCGTTCCCTGAG+TGG | + | chr5.2:34149235-34149254 | None:intergenic | 50.0% |
| !! | GTTGGTGTCACTCTCATCAC+TGG | - | chr5.2:34144638-34144657 | MS.gene55397:intron | 50.0% |
| !! | TCTTGGTGCTGGCAAATCCA+CGG | - | chr5.2:34144664-34144683 | MS.gene55397:intron | 50.0% |
| ACCACCAGACCAACCCAAGT+GGG | + | chr5.2:34150010-34150029 | None:intergenic | 55.0% | |
| CACCAGTTATAGGGCCACTC+AGG | - | chr5.2:34149218-34149237 | MS.gene55397:intron | 55.0% | |
| CTGAGTGGCCCTATAACTGG+TGG | + | chr5.2:34149220-34149239 | None:intergenic | 55.0% | |
| CTGCAGTATCGTAAGCGTGG+CGG | + | chr5.2:34147167-34147186 | None:intergenic | 55.0% | |
| CTGGCATCTGCCAGTCATCT+AGG | + | chr5.2:34148305-34148324 | None:intergenic | 55.0% | |
| GAAGAGTCCCTTGCCTTAGC+TGG | - | chr5.2:34149331-34149350 | MS.gene55397:intron | 55.0% | |
| GACACGTGTCAGTCAGCTAG+AGG | + | chr5.2:34148271-34148290 | None:intergenic | 55.0% | |
| GCTGTGTGCATATCCGTGAC+AGG | - | chr5.2:34148712-34148731 | MS.gene55397:intron | 55.0% | |
| TAGTTCTCTCACAGCCTGCC+AGG | + | chr5.2:34150214-34150233 | None:intergenic | 55.0% | |
| TCCCTGAGTGGCCCTATAAC+TGG | + | chr5.2:34149223-34149242 | None:intergenic | 55.0% | |
| !! | AGAAGGCTCTGGAGCTCTAG+AGG | - | chr5.2:34147053-34147072 | MS.gene55397:intron | 55.0% |
| !! | AGCTCTAGAGGAACTCGAGG+AGG | - | chr5.2:34147065-34147084 | MS.gene55397:intron | 55.0% |
| !! | TGGAGCTCTAGAGGAACTCG+AGG | - | chr5.2:34147062-34147081 | MS.gene55397:intron | 55.0% |
| !! | TGGTCTGGTGGTGTTGGCTT+GGG | - | chr5.2:34150018-34150037 | MS.gene55397:intron | 55.0% |
| !! | TTGGGTTGGTCTGGTGGTGT+TGG | - | chr5.2:34150012-34150031 | MS.gene55397:intron | 55.0% |
| !! | TTGGTCTGGTGGTGTTGGCT+TGG | - | chr5.2:34150017-34150036 | MS.gene55397:intron | 55.0% |
| CACCACCAGACCAACCCAAG+TGG | + | chr5.2:34150011-34150030 | None:intergenic | 60.0% | |
| !! | TTCCAGCTCAAGGAGCACCG+TGG | - | chr5.2:34146599-34146618 | MS.gene55397:intron | 60.0% |
| AGCCACGGTGCTCCTTGAGC+TGG | + | chr5.2:34146604-34146623 | None:intergenic | 65.0% | |
| !! | GCAGCCCACTTGGGTTGGTC+TGG | - | chr5.2:34150003-34150022 | MS.gene55397:intron | 65.0% |
| !! | GCCCACTTGGGTTGGTCTGG+TGG | - | chr5.2:34150006-34150025 | MS.gene55397:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 34144551 | 34150441 | 34144551 | ID=MS.gene55397 |
| chr5.2 | mRNA | 34144551 | 34150441 | 34144551 | ID=MS.gene55397.t1;Parent=MS.gene55397 |
| chr5.2 | exon | 34150307 | 34150441 | 34150307 | ID=MS.gene55397.t1.exon1;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34150307 | 34150441 | 34150307 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34149390 | 34149607 | 34149390 | ID=MS.gene55397.t1.exon2;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34149390 | 34149607 | 34149390 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34148806 | 34148920 | 34148806 | ID=MS.gene55397.t1.exon3;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34148806 | 34148920 | 34148806 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34148328 | 34148417 | 34148328 | ID=MS.gene55397.t1.exon4;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34148328 | 34148417 | 34148328 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34147807 | 34147977 | 34147807 | ID=MS.gene55397.t1.exon5;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34147807 | 34147977 | 34147807 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34147599 | 34147718 | 34147599 | ID=MS.gene55397.t1.exon6;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34147599 | 34147718 | 34147599 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34147109 | 34147219 | 34147109 | ID=MS.gene55397.t1.exon7;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34147109 | 34147219 | 34147109 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34144692 | 34144773 | 34144692 | ID=MS.gene55397.t1.exon8;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34144692 | 34144773 | 34144692 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| chr5.2 | exon | 34144551 | 34144609 | 34144551 | ID=MS.gene55397.t1.exon9;Parent=MS.gene55397.t1 |
| chr5.2 | CDS | 34144551 | 34144609 | 34144551 | ID=cds.MS.gene55397.t1;Parent=MS.gene55397.t1 |
| Gene Sequence |
| Protein sequence |
