Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90838.t1 | XP_013470461.1 | 98.2 | 449 | 8 | 0 | 1 | 449 | 1 | 449 | 3.10E-199 | 704.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90838.t1 | Q9BRT8 | 35.1 | 368 | 193 | 5 | 88 | 444 | 41 | 373 | 6.0e-58 | 226.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90838.t1 | A0A072VR75 | 98.2 | 449 | 8 | 0 | 1 | 449 | 1 | 449 | 2.3e-199 | 704.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene90838 | 0.801984 | 6.96E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene90838 | 0.85354 | 2.23E-61 | -1.69E-46 |
| MS.gene049427 | MS.gene90838 | 0.821973 | 3.04E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene90838 | 0.803464 | 3.44E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene90838 | 0.835529 | 1.59E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene90838 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene90838 | 0.806487 | 8.03E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene90838 | 0.8888 | 4.28E-73 | -1.69E-46 |
| MS.gene050397 | MS.gene90838 | 0.838171 | 3.37E-57 | -1.69E-46 |
| MS.gene050400 | MS.gene90838 | 0.854893 | 9.09E-62 | -1.69E-46 |
| MS.gene050426 | MS.gene90838 | -0.819556 | 1.09E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene90838 | 0.831031 | 2.10E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene90838 | 0.831143 | 1.97E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene90838 | 0.809012 | 2.33E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene90838 | 0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene050625 | MS.gene90838 | 0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene90838 | 0.838165 | 3.38E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene90838 | 0.883683 | 3.64E-71 | -1.69E-46 |
| MS.gene050783 | MS.gene90838 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene90838 | 0.858513 | 7.83E-63 | -1.69E-46 |
| MS.gene050971 | MS.gene90838 | 0.804392 | 2.21E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene90838 | 0.858502 | 7.89E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene90838 | 0.836956 | 6.90E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene90838 | 0.817346 | 3.46E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene90838 | 0.857365 | 1.72E-62 | -1.69E-46 |
| MS.gene051471 | MS.gene90838 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene90838 | 0.88284 | 7.43E-71 | -1.69E-46 |
| MS.gene051582 | MS.gene90838 | 0.884188 | 2.37E-71 | -1.69E-46 |
| MS.gene051663 | MS.gene90838 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene90838 | 0.821774 | 3.38E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene90838 | 0.820344 | 7.21E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene90838 | 0.8355 | 1.62E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene90838 | -0.85139 | 9.15E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene90838 | 0.809561 | 1.78E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene90838 | 0.824237 | 9.00E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene90838 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene90838 | 0.871029 | 9.33E-67 | -1.69E-46 |
| MS.gene052253 | MS.gene90838 | 0.868502 | 6.22E-66 | -1.69E-46 |
| MS.gene052310 | MS.gene90838 | 0.866835 | 2.13E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene90838 | 0.864655 | 1.04E-64 | -1.69E-46 |
| MS.gene052326 | MS.gene90838 | 0.828359 | 9.40E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene90838 | 0.862769 | 4.01E-64 | -1.69E-46 |
| MS.gene052414 | MS.gene90838 | 0.803356 | 3.62E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene90838 | 0.83391 | 4.06E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene90838 | 0.843383 | 1.45E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene90838 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene90838 | 0.867475 | 1.33E-65 | -1.69E-46 |
| MS.gene052982 | MS.gene90838 | 0.823713 | 1.19E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene90838 | 0.818241 | 2.17E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene90838 | 0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene90838 | 0.847933 | 8.45E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene90838 | 0.846462 | 2.14E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene90838 | 0.812872 | 3.41E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene90838 | 0.821766 | 3.39E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene90838 | 0.863002 | 3.40E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene90838 | 0.866059 | 3.76E-65 | -1.69E-46 |
| MS.gene054010 | MS.gene90838 | 0.832882 | 7.33E-56 | -1.69E-46 |
| MS.gene054011 | MS.gene90838 | 0.828176 | 1.04E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene90838 | 0.832181 | 1.09E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene90838 | 0.829626 | 4.63E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene90838 | 0.874829 | 4.97E-68 | -1.69E-46 |
| MS.gene054183 | MS.gene90838 | 0.803489 | 3.40E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene90838 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene90838 | 0.862731 | 4.12E-64 | -1.69E-46 |
| MS.gene05455 | MS.gene90838 | 0.842514 | 2.47E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene90838 | 0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene90838 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene90838 | 0.851023 | 1.16E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene90838 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene055369 | MS.gene90838 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene90838 | 0.836839 | 7.40E-57 | -1.69E-46 |
| MS.gene055412 | MS.gene90838 | 0.844031 | 9.72E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene90838 | 0.852141 | 5.61E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene90838 | 0.851963 | 6.30E-61 | -1.69E-46 |
| MS.gene055539 | MS.gene90838 | 0.830155 | 3.44E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene90838 | 0.87559 | 2.73E-68 | -1.69E-46 |
| MS.gene05556 | MS.gene90838 | 0.819616 | 1.06E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene90838 | 0.815983 | 6.99E-52 | -1.69E-46 |
| MS.gene055712 | MS.gene90838 | 0.802425 | 5.64E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene90838 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene90838 | 0.838771 | 2.36E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene90838 | 0.884127 | 2.50E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene90838 | 0.838068 | 3.58E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene90838 | 0.800707 | 1.27E-48 | -1.69E-46 |
| MS.gene056514 | MS.gene90838 | 0.807843 | 4.15E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene90838 | 0.818022 | 2.43E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene90838 | 0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene90838 | 0.830957 | 2.19E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene90838 | 0.869766 | 2.42E-66 | -1.69E-46 |
| MS.gene056877 | MS.gene90838 | 0.814872 | 1.23E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene90838 | 0.824686 | 7.06E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene90838 | 0.835494 | 1.62E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene90838 | 0.838781 | 2.35E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene90838 | 0.828869 | 7.07E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene90838 | 0.83796 | 3.82E-57 | -1.69E-46 |
| MS.gene057123 | MS.gene90838 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene90838 | 0.839478 | 1.55E-57 | -1.69E-46 |
| MS.gene057245 | MS.gene90838 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene90838 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene90838 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene90838 | 0.820312 | 7.33E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene90838 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene90838 | 0.810905 | 9.14E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene90838 | 0.821991 | 3.01E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene90838 | 0.807226 | 5.60E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene90838 | 0.808221 | 3.45E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene90838 | 0.841984 | 3.41E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene90838 | 0.845818 | 3.20E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene90838 | 0.872127 | 4.04E-67 | -1.69E-46 |
| MS.gene058007 | MS.gene90838 | 0.842042 | 3.29E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene90838 | 0.820314 | 7.32E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene90838 | 0.809934 | 1.48E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene90838 | 0.880534 | 5.07E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene90838 | 0.82816 | 1.05E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene90838 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene90838 | 0.867758 | 1.08E-65 | -1.69E-46 |
| MS.gene058293 | MS.gene90838 | 0.877234 | 7.40E-69 | -1.69E-46 |
| MS.gene058323 | MS.gene90838 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene90838 | 0.830466 | 2.89E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene90838 | 0.830677 | 2.57E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene90838 | 0.81672 | 4.78E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene90838 | 0.857484 | 1.58E-62 | -1.69E-46 |
| MS.gene058660 | MS.gene90838 | 0.859741 | 3.35E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene90838 | 0.87925 | 1.45E-69 | -1.69E-46 |
| MS.gene058787 | MS.gene90838 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene90838 | 0.820483 | 6.70E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene90838 | 0.800979 | 1.12E-48 | -1.69E-46 |
| MS.gene058948 | MS.gene90838 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene058993 | MS.gene90838 | 0.814138 | 1.79E-51 | -1.69E-46 |
| MS.gene058995 | MS.gene90838 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene90838 | 0.906967 | 8.42E-81 | -1.69E-46 |
| MS.gene059082 | MS.gene90838 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene90838 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene90838 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene90838 | 0.844595 | 6.86E-59 | -1.69E-46 |
| MS.gene059462 | MS.gene90838 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene90838 | 0.829204 | 5.87E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene90838 | 0.827762 | 1.31E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene90838 | 0.854154 | 1.49E-61 | -1.69E-46 |
| MS.gene05959 | MS.gene90838 | 0.842834 | 2.03E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene90838 | 0.883061 | 6.17E-71 | -1.69E-46 |
| MS.gene059688 | MS.gene90838 | 0.878494 | 2.68E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene90838 | 0.87645 | 1.38E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene90838 | 0.879944 | 8.24E-70 | -1.69E-46 |
| MS.gene05984 | MS.gene90838 | 0.872409 | 3.25E-67 | -1.69E-46 |
| MS.gene059894 | MS.gene90838 | 0.834489 | 2.91E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene90838 | 0.809981 | 1.45E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene90838 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene90838 | 0.858769 | 6.56E-63 | -1.69E-46 |
| MS.gene060407 | MS.gene90838 | 0.832828 | 7.56E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene90838 | 0.8041 | 2.54E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene90838 | 0.831121 | 2.00E-55 | -1.69E-46 |
| MS.gene06090 | MS.gene90838 | 0.817443 | 3.29E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene90838 | 0.848164 | 7.30E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene90838 | 0.852931 | 3.34E-61 | -1.69E-46 |
| MS.gene061051 | MS.gene90838 | -0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene90838 | 0.855891 | 4.65E-62 | -1.69E-46 |
| MS.gene061159 | MS.gene90838 | 0.819028 | 1.44E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene90838 | 0.800182 | 1.62E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90838 | MS.gene066450 | PPI |
| MS.gene78682 | MS.gene90838 | PPI |
| MS.gene75176 | MS.gene90838 | PPI |
| MS.gene029104 | MS.gene90838 | PPI |
| MS.gene90838 | MS.gene55396 | PPI |
| MS.gene55397 | MS.gene90838 | PPI |
| MS.gene53182 | MS.gene90838 | PPI |
| MS.gene90838 | MS.gene029104 | PPI |
| MS.gene90838 | MS.gene054657 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90838.t1 | MTR_1g115505 | 99.109 | 449 | 4 | 0 | 1 | 449 | 1 | 449 | 0.0 | 915 |
| MS.gene90838.t1 | MTR_8g071110 | 52.887 | 433 | 173 | 5 | 21 | 449 | 2 | 407 | 8.25e-149 | 429 |
| MS.gene90838.t1 | MTR_5g044050 | 37.234 | 376 | 192 | 7 | 83 | 447 | 24 | 366 | 2.79e-73 | 235 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90838.t1 | AT1G80480 | 78.663 | 389 | 76 | 2 | 61 | 449 | 63 | 444 | 0.0 | 575 |
| MS.gene90838.t1 | AT1G15730 | 71.635 | 416 | 111 | 3 | 36 | 449 | 38 | 448 | 0.0 | 573 |
| MS.gene90838.t1 | AT1G26520 | 37.602 | 367 | 185 | 6 | 89 | 447 | 42 | 372 | 4.28e-76 | 242 |
Find 118 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTTGCTTCAAGCTTATT+TGG | 0.162746 | 1.4:+87709260 | MS.gene90838:CDS |
| CTTCTTTGGTCCAGCGGATT+AGG | 0.207261 | 1.4:+87712234 | MS.gene90838:CDS |
| ATGGTCAAATTTGCCTTTCT+TGG | 0.221608 | 1.4:-87709927 | None:intergenic |
| ATACTCCGTCCTCTTTAAAT+TGG | 0.236187 | 1.4:-87712381 | None:intergenic |
| GAATGAAAGATTTGTCTTTC+AGG | 0.236233 | 1.4:+87713703 | MS.gene90838:CDS |
| GTGAACTTGGATTATGTTCT+TGG | 0.237961 | 1.4:+87712410 | MS.gene90838:CDS |
| TCTGGCTGCCACAACCTTTC+CGG | 0.245017 | 1.4:-87713929 | None:intergenic |
| CGAATCAGACATCACTTCTT+TGG | 0.265430 | 1.4:+87712220 | MS.gene90838:CDS |
| TTGTTTGTCCTTGGCTCATC+TGG | 0.268152 | 1.4:-87713947 | None:intergenic |
| GCCTCATTGACCACACCTTT+TGG | 0.295052 | 1.4:-87710198 | None:intergenic |
| CTACGGAAGATTGTAGAAAT+TGG | 0.299599 | 1.4:-87709377 | None:intergenic |
| AATAGTATCCTCAGCATAAA+AGG | 0.305064 | 1.4:-87710097 | None:intergenic |
| TGATCGAATAATCGTAAATA+AGG | 0.306250 | 1.4:+87710242 | MS.gene90838:CDS |
| AGAAGAGTGGTGAAGGGTTT+GGG | 0.309735 | 1.4:-87709299 | None:intergenic |
| GAACTTGAATGCTGAGGAAT+TGG | 0.310817 | 1.4:+87713988 | MS.gene90838:CDS |
| AATTTAAAGAGGACGGAGTA+TGG | 0.326999 | 1.4:+87712383 | MS.gene90838:CDS |
| AAGAAGAGTGGTGAAGGGTT+TGG | 0.330035 | 1.4:-87709300 | None:intergenic |
| TGGCATTGGAGGCTTTGATT+TGG | 0.346009 | 1.4:+87712430 | MS.gene90838:CDS |
| TTCTTTGGTCCAGCGGATTA+GGG | 0.359042 | 1.4:+87712235 | MS.gene90838:CDS |
| GCATAAAAGGTCTGGATTAT+CGG | 0.359801 | 1.4:-87710084 | None:intergenic |
| TAATACAGGTTTGGCGAATC+CGG | 0.361283 | 1.4:+87710059 | MS.gene90838:intron |
| GTGGCAGGAATGCGGTTATC+AGG | 0.367337 | 1.4:-87709494 | None:intergenic |
| GTCACTACGTTCCATCAATA+AGG | 0.373389 | 1.4:-87713639 | None:intergenic |
| TTGGATTATGTTCTTGGCAT+TGG | 0.395925 | 1.4:+87712416 | MS.gene90838:CDS |
| TTTGGTGAGATTGATATTGA+TGG | 0.412472 | 1.4:+87709788 | MS.gene90838:CDS |
| AGAGGCGAGTGAGTTTGTTA+TGG | 0.423350 | 1.4:-87709406 | None:intergenic |
| GAAATTGGAGATGAGTTTAA+CGG | 0.433464 | 1.4:-87709362 | None:intergenic |
| CATGGTCATGGTCATGGCTA+TGG | 0.434201 | 1.4:-87712977 | None:intergenic |
| GTGGCTTGGTACCTTATTGA+TGG | 0.439152 | 1.4:+87713628 | MS.gene90838:CDS |
| AAATGATGATGATACCTTGC+CGG | 0.444794 | 1.4:-87709540 | None:intergenic |
| GGAGTTCATGACATATTTCA+AGG | 0.445771 | 1.4:+87713902 | MS.gene90838:CDS |
| AACGTAGTGACGACATTTAT+AGG | 0.447587 | 1.4:+87713651 | MS.gene90838:CDS |
| TATCCTCAGCATAAAAGGTC+TGG | 0.451814 | 1.4:-87710092 | None:intergenic |
| CCGTCCTCTTTAAATTGGCC+AGG | 0.458430 | 1.4:-87712376 | None:intergenic |
| TGTGGTCATGTGAATCTTCA+TGG | 0.466615 | 1.4:-87713031 | None:intergenic |
| GAATGCTGAGGAATTGGAAA+AGG | 0.468936 | 1.4:+87713994 | MS.gene90838:CDS |
| GATCATGATGATGGTGTTCA+TGG | 0.472248 | 1.4:-87712995 | None:intergenic |
| AAAGGTCTTCTATCTGTTCA+AGG | 0.474112 | 1.4:+87713677 | MS.gene90838:CDS |
| TTGTCTTTGCTGTACTGTGA+GGG | 0.479297 | 1.4:+87709868 | MS.gene90838:CDS |
| CATATTGTTATTGAGACTAC+TGG | 0.484719 | 1.4:+87709947 | MS.gene90838:CDS |
| TTGCACCAGACTGATCTTGT+TGG | 0.485087 | 1.4:+87712197 | MS.gene90838:intron |
| CAGTAGTCTCAATAACAATA+TGG | 0.488237 | 1.4:-87709946 | None:intergenic |
| ATGGTCATGGTCATGGCTAT+GGG | 0.492078 | 1.4:-87712976 | None:intergenic |
| CTATAGGCTAACATGTGGCT+TGG | 0.493336 | 1.4:+87713614 | MS.gene90838:intron |
| GATTATGTTCTTGGCATTGG+AGG | 0.493460 | 1.4:+87712419 | MS.gene90838:CDS |
| GAATTAGTCACTTCCAAGAA+AGG | 0.495832 | 1.4:+87709914 | MS.gene90838:CDS |
| ACCGAGAAAACCGGTGATGA+TGG | 0.498944 | 1.4:-87709516 | None:intergenic |
| TTCTTAGTATCACAGCAAAC+AGG | 0.504205 | 1.4:-87714026 | None:intergenic |
| GGAGTATGGAAAGGTGAACT+TGG | 0.507746 | 1.4:+87712397 | MS.gene90838:CDS |
| AATTGCGGTTATTGAAAATG+AGG | 0.508358 | 1.4:+87709677 | MS.gene90838:CDS |
| AATGCTGAGGAATTGGAAAA+GGG | 0.512342 | 1.4:+87713995 | MS.gene90838:CDS |
| GTTGGATGGTGTTGTCACTT+TGG | 0.513457 | 1.4:+87710134 | MS.gene90838:CDS |
| GTTTGTTATGGTTGTTACTA+CGG | 0.516237 | 1.4:-87709394 | None:intergenic |
| TTTAATGAAGTCAAGTTGGA+TGG | 0.519334 | 1.4:+87710120 | MS.gene90838:CDS |
| TCGGAGTCGTCGGTGGTTTG+AGG | 0.520426 | 1.4:-87709449 | None:intergenic |
| TGACATATTTCAAGGTTCAC+CGG | 0.523489 | 1.4:+87713910 | MS.gene90838:CDS |
| GGTGTTCATGGTCATGGTCA+TGG | 0.528471 | 1.4:-87712983 | None:intergenic |
| GGAGACGTCGTCGGAGTCGT+CGG | 0.528650 | 1.4:-87709459 | None:intergenic |
| CTTGCCGGAACCGAGAAAAC+CGG | 0.529351 | 1.4:-87709525 | None:intergenic |
| AATCTTCATGGTGATGGTGG+TGG | 0.536012 | 1.4:-87713019 | None:intergenic |
| TATTGATGGTTCTTTAGTTG+CGG | 0.539178 | 1.4:+87709802 | MS.gene90838:CDS |
| CTTGACGAGGTTAAGCCAAA+AGG | 0.540274 | 1.4:+87710183 | MS.gene90838:CDS |
| ATTCCTGCCACCATCATCAC+CGG | 0.540312 | 1.4:+87709506 | MS.gene90838:CDS |
| AAACCGGTGATGATGGTGGC+AGG | 0.542945 | 1.4:-87709509 | None:intergenic |
| CATATTCTCACAGCGGAGCA+TGG | 0.544248 | 1.4:+87709648 | MS.gene90838:CDS |
| ATGCTCACTGATGAAACGCC+AGG | 0.549059 | 1.4:-87713405 | None:intergenic |
| TTGGTTGATGCGAAACATGC+TGG | 0.549484 | 1.4:+87710153 | MS.gene90838:CDS |
| GCGGTTATCAGGTGGAATAA+CGG | 0.551353 | 1.4:-87709483 | None:intergenic |
| CATGATCATAGTCACGATCC+TGG | 0.552341 | 1.4:+87713387 | MS.gene90838:CDS |
| GGTGGTGGTGATCATGATGA+TGG | 0.553558 | 1.4:-87713004 | None:intergenic |
| GAGAGCGCTGTTAATGATGA+AGG | 0.554591 | 1.4:+87712933 | MS.gene90838:CDS |
| ATTCCAGAAAATAAACAGCC+TGG | 0.556534 | 1.4:+87712358 | MS.gene90838:intron |
| AAGGTTCACCGGAAAGGTTG+TGG | 0.556980 | 1.4:+87713921 | MS.gene90838:CDS |
| GACGACATTTATAGGATGAA+AGG | 0.558665 | 1.4:+87713659 | MS.gene90838:CDS |
| TATTTCAAGGTTCACCGGAA+AGG | 0.560823 | 1.4:+87713915 | MS.gene90838:CDS |
| GGGTTTGGGTTTGCGATAAG+CGG | 0.562113 | 1.4:-87709285 | None:intergenic |
| CATGTGAATCTTCATGGTGA+TGG | 0.566710 | 1.4:-87713025 | None:intergenic |
| GATATTATGTTGTTGAACAA+TGG | 0.568349 | 1.4:+87709845 | MS.gene90838:CDS |
| AGACACTAACCCTAATCCGC+TGG | 0.576738 | 1.4:-87712244 | None:intergenic |
| AGCAAGTACTAACCTTCTCA+AGG | 0.584526 | 1.4:-87713449 | None:intergenic |
| AAAGAGGACGGAGTATGGAA+AGG | 0.586024 | 1.4:+87712388 | MS.gene90838:CDS |
| GTGAATCTTCATGGTGATGG+TGG | 0.586196 | 1.4:-87713022 | None:intergenic |
| TTGGAGGCTTTGATTTGGAG+AGG | 0.586416 | 1.4:+87712435 | MS.gene90838:CDS |
| GGTGGAAAGAAGAGTGGTGA+AGG | 0.586615 | 1.4:-87709306 | None:intergenic |
| TGCTGGTTTGCATCTTGACG+AGG | 0.587527 | 1.4:+87710170 | MS.gene90838:CDS |
| GGTTTGAGGCGGAGATGAGG+TGG | 0.587638 | 1.4:-87709435 | None:intergenic |
| GGTGTTGGTGGAAAGAAGAG+TGG | 0.592017 | 1.4:-87709312 | None:intergenic |
| CAACATAATATCTTCAGCAC+CGG | 0.592357 | 1.4:-87709834 | None:intergenic |
| TTCAGTGAAACAAAACGCCA+TGG | 0.593485 | 1.4:-87709240 | None:intergenic |
| ACAGCCTGGCCAATTTAAAG+AGG | 0.594420 | 1.4:+87712372 | MS.gene90838:CDS |
| GCCAAAAGGTGTGGTCAATG+AGG | 0.599909 | 1.4:+87710197 | MS.gene90838:CDS |
| AAATTTAGGTACCATGCTTG+TGG | 0.601243 | 1.4:-87713049 | None:intergenic |
| GTTGTCTTTGCTGTACTGTG+AGG | 0.604741 | 1.4:+87709867 | MS.gene90838:CDS |
| GACGTCGTCGGAGTCGTCGG+TGG | 0.608943 | 1.4:-87709456 | None:intergenic |
| GGTGGTTTGAGGCGGAGATG+AGG | 0.610253 | 1.4:-87709438 | None:intergenic |
| GATGATGGTGTTCATGGTCA+TGG | 0.610283 | 1.4:-87712989 | None:intergenic |
| AGGGAAGAACTTGAATGCTG+AGG | 0.611753 | 1.4:+87713982 | MS.gene90838:CDS |
| GTGGAAAGAAGAGTGGTGAA+GGG | 0.612512 | 1.4:-87709305 | None:intergenic |
| ACATCACTTCTTTGGTCCAG+CGG | 0.614631 | 1.4:+87712228 | MS.gene90838:CDS |
| TGTCTTTGCTGTACTGTGAG+GGG | 0.617492 | 1.4:+87709869 | MS.gene90838:CDS |
| AAGGTCTGGATTATCGGCGC+CGG | 0.617720 | 1.4:-87710078 | None:intergenic |
| GCAGGAATGCGGTTATCAGG+TGG | 0.618572 | 1.4:-87709491 | None:intergenic |
| CCTGGCCAATTTAAAGAGGA+CGG | 0.624870 | 1.4:+87712376 | MS.gene90838:CDS |
| TCAGTGAGCATAGTTTGCGA+AGG | 0.626638 | 1.4:+87713417 | MS.gene90838:CDS |
| GAGTCGTCGGTGGTTTGAGG+CGG | 0.627298 | 1.4:-87709446 | None:intergenic |
| AGGAAACTTAGACCTTGAGA+AGG | 0.627667 | 1.4:+87713437 | MS.gene90838:CDS |
| GATTCACATGACCACAAGCA+TGG | 0.628690 | 1.4:+87713038 | MS.gene90838:CDS |
| TGTGGCAGCCAGATGAGCCA+AGG | 0.631087 | 1.4:+87713939 | MS.gene90838:CDS |
| GAGATGAGGTGGATGATGAG+AGG | 0.634300 | 1.4:-87709424 | None:intergenic |
| CGAGGTTAAGCCAAAAGGTG+TGG | 0.651456 | 1.4:+87710188 | MS.gene90838:CDS |
| GAGAAAACCGGTGATGATGG+TGG | 0.657464 | 1.4:-87709513 | None:intergenic |
| ATGCTGAGGAATTGGAAAAG+GGG | 0.668894 | 1.4:+87713996 | MS.gene90838:CDS |
| GTTATCAGGTGGAATAACGG+TGG | 0.683146 | 1.4:-87709480 | None:intergenic |
| TGATGATGGTGGCAGGAATG+CGG | 0.686059 | 1.4:-87709502 | None:intergenic |
| AATAACGGTGGAGACGTCGT+CGG | 0.694029 | 1.4:-87709468 | None:intergenic |
| GGAGCATGGAAAACGAATTG+CGG | 0.698183 | 1.4:+87709662 | MS.gene90838:CDS |
| ATTCAGATATCATTCTAACA+AGG | 0.703033 | 1.4:-87709895 | None:intergenic |
| TCTGAATCATATTCTCACAG+CGG | 0.771767 | 1.4:+87709641 | MS.gene90838:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATAAAT+AGG | - | chr1.4:87713174-87713193 | None:intergenic | 0.0% |
| !!! | AACTTATTTTTATTTAAGAA+TGG | + | chr1.4:87710791-87710810 | MS.gene90838:intron | 10.0% |
| !!! | AAGTAAAATAAGATATTTTT+TGG | - | chr1.4:87711442-87711461 | None:intergenic | 10.0% |
| !!! | ATCTAATTTTATTATTTGAA+TGG | + | chr1.4:87713203-87713222 | MS.gene90838:intron | 10.0% |
| !!! | TCTTAAGTTTTTTTTTTTTT+TGG | + | chr1.4:87711087-87711106 | MS.gene90838:intron | 10.0% |
| !! | AAAACTTAAGATTTAAATGT+TGG | - | chr1.4:87711078-87711097 | None:intergenic | 15.0% |
| !! | AAACTTAAGATTTAAATGTT+GGG | - | chr1.4:87711077-87711096 | None:intergenic | 15.0% |
| !! | AGCATTAACATAAAAAATAA+AGG | - | chr1.4:87713537-87713556 | None:intergenic | 15.0% |
| !!! | ATATATTTTATGAAACTGTA+TGG | + | chr1.4:87711915-87711934 | MS.gene90838:intron | 15.0% |
| !!! | ATTAATTTGTCTTATTCATT+TGG | + | chr1.4:87713496-87713515 | MS.gene90838:intron | 15.0% |
| !!! | TAATTTTATTATTTGAATGG+TGG | + | chr1.4:87713206-87713225 | MS.gene90838:intron | 15.0% |
| !!! | TTTTCAATTGTTTAAGAAAA+AGG | + | chr1.4:87712483-87712502 | MS.gene90838:intron | 15.0% |
| !!! | TTTTTCATTGATGAAAAATA+TGG | + | chr1.4:87710306-87710325 | MS.gene90838:intron | 15.0% |
| !!! | TTTTTCTTAAACAATTGAAA+AGG | - | chr1.4:87712484-87712503 | None:intergenic | 15.0% |
| !! | AAAAATTCTACATCAAGTTA+TGG | + | chr1.4:87710439-87710458 | MS.gene90838:intron | 20.0% |
| !! | ATAATTCAAAATTCGCTATA+TGG | - | chr1.4:87710416-87710435 | None:intergenic | 20.0% |
| !! | GCTAATTTATACTTATTACA+GGG | + | chr1.4:87710273-87710292 | MS.gene90838:intron | 20.0% |
| !! | TAAAAGCTTATAGATGTTAA+TGG | - | chr1.4:87712076-87712095 | None:intergenic | 20.0% |
| !! | TAAAAGTTTATAGATGTTCA+TGG | - | chr1.4:87711467-87711486 | None:intergenic | 20.0% |
| !! | TAAAATTGAACTGCTTATTA+GGG | + | chr1.4:87710003-87710022 | MS.gene90838:intron | 20.0% |
| !! | TAACTAAATAATGTACAGTA+TGG | + | chr1.4:87710372-87710391 | MS.gene90838:intron | 20.0% |
| !! | TCCCAGTTAAAATAAATTTA+TGG | - | chr1.4:87712121-87712140 | None:intergenic | 20.0% |
| !! | TCTCAGTTAAAATAAGTTTA+TGG | - | chr1.4:87711512-87711531 | None:intergenic | 20.0% |
| !! | TGAAAACAACAACAATAAAT+AGG | - | chr1.4:87713750-87713769 | None:intergenic | 20.0% |
| !! | TGACAAATCTTATCAAAAAT+AGG | - | chr1.4:87713139-87713158 | None:intergenic | 20.0% |
| !! | TGTATGAAAGTTTCAAATAA+CGG | - | chr1.4:87710932-87710951 | None:intergenic | 20.0% |
| !! | TTGAAATGATTGAATTGAAA+TGG | - | chr1.4:87709581-87709600 | None:intergenic | 20.0% |
| !! | TTTCATAAGGACAAATTATA+AGG | + | chr1.4:87713273-87713292 | MS.gene90838:intron | 20.0% |
| !!! | AACTAACATACTTTTTCTAT+AGG | + | chr1.4:87713598-87713617 | MS.gene90838:intron | 20.0% |
| !!! | ACAAACAAAATTGTTTTCAT+AGG | + | chr1.4:87713962-87713981 | MS.gene90838:CDS | 20.0% |
| !!! | AGCCATAAATTTATTTTAAC+TGG | + | chr1.4:87712116-87712135 | MS.gene90838:intron | 20.0% |
| !!! | ATGAATAGTTCTTTTGATTT+TGG | - | chr1.4:87709336-87709355 | None:intergenic | 20.0% |
| !!! | CAAAAGTTCTAAAAGTTATA+TGG | - | chr1.4:87712646-87712665 | None:intergenic | 20.0% |
| !!! | CAAACAAAATTGTTTTCATA+GGG | + | chr1.4:87713963-87713982 | MS.gene90838:CDS | 20.0% |
| !!! | CATATAACTTTTAGAACTTT+TGG | + | chr1.4:87712644-87712663 | MS.gene90838:intron | 20.0% |
| !!! | GAATTTTCAATTTCATTATG+AGG | + | chr1.4:87711674-87711693 | MS.gene90838:intron | 20.0% |
| !!! | GCCATAAATTTATTTTAACT+GGG | + | chr1.4:87712117-87712136 | MS.gene90838:intron | 20.0% |
| !!! | TAAATCTTAAGGGAATTTTT+TGG | + | chr1.4:87711652-87711671 | MS.gene90838:intron | 20.0% |
| !!! | TATTTTTAATGAAGTCAAGT+TGG | + | chr1.4:87710116-87710135 | MS.gene90838:CDS | 20.0% |
| !!! | TGAACATCTATAAACTTTTA+AGG | + | chr1.4:87711467-87711486 | MS.gene90838:intron | 20.0% |
| !!! | TTAACATCTATAAGCTTTTA+AGG | + | chr1.4:87712076-87712095 | MS.gene90838:intron | 20.0% |
| ! | AAACAAGAAAGGATTGAATT+GGG | - | chr1.4:87713256-87713275 | None:intergenic | 25.0% |
| ! | AAATTCTCAAGAAATGCTTA+TGG | + | chr1.4:87711322-87711341 | MS.gene90838:intron | 25.0% |
| ! | AACAGTGAAGATTTAAATGT+TGG | - | chr1.4:87711576-87711595 | None:intergenic | 25.0% |
| ! | AATAATGTACAGTATGGTTA+TGG | + | chr1.4:87710378-87710397 | MS.gene90838:intron | 25.0% |
| ! | AATGTAAGTTTACTTCTTCT+CGG | + | chr1.4:87712514-87712533 | MS.gene90838:intron | 25.0% |
| ! | AATTTATACTTATTACAGGG+TGG | + | chr1.4:87710276-87710295 | MS.gene90838:intron | 25.0% |
| ! | ACAGTGAAGATTTAAATGTT+GGG | - | chr1.4:87711575-87711594 | None:intergenic | 25.0% |
| ! | ACTCAACAATTAGATACATT+AGG | - | chr1.4:87712682-87712701 | None:intergenic | 25.0% |
| ! | AGTTAGACATTAATACAAAG+TGG | + | chr1.4:87712151-87712170 | MS.gene90838:intron | 25.0% |
| ! | ATCTAGTACAATCAAAATGT+TGG | + | chr1.4:87710592-87710611 | MS.gene90838:intron | 25.0% |
| ! | ATTCAGATATCATTCTAACA+AGG | - | chr1.4:87709898-87709917 | None:intergenic | 25.0% |
| ! | GAAAATAGTGTATCATTCTT+AGG | + | chr1.4:87710848-87710867 | MS.gene90838:intron | 25.0% |
| ! | GAATTTCCTATCTAATTATG+AGG | + | chr1.4:87711109-87711128 | MS.gene90838:intron | 25.0% |
| ! | GATATTATGTTGTTGAACAA+TGG | + | chr1.4:87709845-87709864 | MS.gene90838:CDS | 25.0% |
| ! | GGCTAATTTATACTTATTAC+AGG | + | chr1.4:87710272-87710291 | MS.gene90838:intron | 25.0% |
| ! | GTAAAATTGAACTGCTTATT+AGG | + | chr1.4:87710002-87710021 | MS.gene90838:intron | 25.0% |
| ! | TATTGAACTGAAATATGTAG+CGG | + | chr1.4:87711853-87711872 | MS.gene90838:intron | 25.0% |
| ! | TCCCTTAAGATTTAAATGTT+GGG | - | chr1.4:87711646-87711665 | None:intergenic | 25.0% |
| ! | TCTAGTACAATCAAAATGTT+GGG | + | chr1.4:87710593-87710612 | MS.gene90838:intron | 25.0% |
| ! | TCTTAAACAATTGAAAAGGA+AGG | - | chr1.4:87712480-87712499 | None:intergenic | 25.0% |
| ! | TGATCGAATAATCGTAAATA+AGG | + | chr1.4:87710242-87710261 | MS.gene90838:CDS | 25.0% |
| ! | TGCATATGATTATTGTAGTT+TGG | + | chr1.4:87709770-87709789 | MS.gene90838:intron | 25.0% |
| ! | TGGGTATTTAGATATTTCTT+CGG | + | chr1.4:87712832-87712851 | MS.gene90838:intron | 25.0% |
| ! | TGTTTGTATTAATACAGGTT+TGG | + | chr1.4:87710050-87710069 | MS.gene90838:intron | 25.0% |
| ! | TTCCCTTAAGATTTAAATGT+TGG | - | chr1.4:87711647-87711666 | None:intergenic | 25.0% |
| ! | TTGACTGTTTGTATTAATAC+AGG | + | chr1.4:87710045-87710064 | MS.gene90838:intron | 25.0% |
| !! | AATCGTAAATAAGGTATTCA+TGG | + | chr1.4:87710251-87710270 | MS.gene90838:intron | 25.0% |
| !! | ATGTCTTCTTGATCTTTTTA+AGG | + | chr1.4:87712907-87712926 | MS.gene90838:intron | 25.0% |
| !! | ATTTAAATGTTGGGGTTTTA+AGG | - | chr1.4:87711637-87711656 | None:intergenic | 25.0% |
| !! | CATTTAAATCTTCACTGTTT+TGG | + | chr1.4:87711577-87711596 | MS.gene90838:intron | 25.0% |
| !! | GAAAATGACAGTATTGTTTT+GGG | + | chr1.4:87711012-87711031 | MS.gene90838:intron | 25.0% |
| !! | TTAGTTTGGGTTATAAAACA+TGG | + | chr1.4:87710817-87710836 | MS.gene90838:intron | 25.0% |
| !!! | AAAACAATTTTGTTTGTCCT+TGG | - | chr1.4:87713959-87713978 | None:intergenic | 25.0% |
| !!! | AGTTCTAAAAGTTATATGGT+AGG | - | chr1.4:87712642-87712661 | None:intergenic | 25.0% |
| !!! | ATGAGAATGATTTTAGCATA+TGG | - | chr1.4:87712617-87712636 | None:intergenic | 25.0% |
| !!! | TATTGTTTTGGGATTTACAA+TGG | + | chr1.4:87711023-87711042 | MS.gene90838:intron | 25.0% |
| !!! | TTAAGAATGGCTTTTAGTTT+GGG | + | chr1.4:87710804-87710823 | MS.gene90838:intron | 25.0% |
| !!! | TTTAAGAATGGCTTTTAGTT+TGG | + | chr1.4:87710803-87710822 | MS.gene90838:intron | 25.0% |
| AAAAAACATCTCATGTGAAG+TGG | + | chr1.4:87711401-87711420 | MS.gene90838:intron | 30.0% | |
| AATAACTCGAGTATATGTAC+AGG | - | chr1.4:87712578-87712597 | None:intergenic | 30.0% | |
| AATAGTATCCTCAGCATAAA+AGG | - | chr1.4:87710100-87710119 | None:intergenic | 30.0% | |
| AATTGCGGTTATTGAAAATG+AGG | + | chr1.4:87709677-87709696 | MS.gene90838:CDS | 30.0% | |
| ACCCCAACATTTAAATCTTA+AGG | + | chr1.4:87711641-87711660 | MS.gene90838:intron | 30.0% | |
| AGAAAAAAGCCATGCTTTAT+TGG | - | chr1.4:87713875-87713894 | None:intergenic | 30.0% | |
| ATGTTTAGTCATAACCTCAT+GGG | + | chr1.4:87712813-87712832 | MS.gene90838:intron | 30.0% | |
| ATTAAATGCGTAGAAGAACT+AGG | - | chr1.4:87711823-87711842 | None:intergenic | 30.0% | |
| ATTGAACTGAAATATGTAGC+GGG | + | chr1.4:87711854-87711873 | MS.gene90838:intron | 30.0% | |
| ATTTAAATGTTGGGGATTTG+AGG | - | chr1.4:87711566-87711585 | None:intergenic | 30.0% | |
| CAGTAGTCTCAATAACAATA+TGG | - | chr1.4:87709949-87709968 | None:intergenic | 30.0% | |
| CAGTGAAGATTTAAATGTTG+GGG | - | chr1.4:87711574-87711593 | None:intergenic | 30.0% | |
| CCCCAACATTTAAATCTTAA+GGG | + | chr1.4:87711642-87711661 | MS.gene90838:intron | 30.0% | |
| CCCTTAAGATTTAAATGTTG+GGG | - | chr1.4:87711645-87711664 | None:intergenic | 30.0% | |
| GAAACAAGAAAGGATTGAAT+TGG | - | chr1.4:87713257-87713276 | None:intergenic | 30.0% | |
| GAAATATCTAAATACCCATG+AGG | - | chr1.4:87712830-87712849 | None:intergenic | 30.0% | |
| GAAATTGGAGATGAGTTTAA+CGG | - | chr1.4:87709365-87709384 | None:intergenic | 30.0% | |
| GAATGAAAGATTTGTCTTTC+AGG | + | chr1.4:87713703-87713722 | MS.gene90838:CDS | 30.0% | |
| GAATTCTCAAGAAACACTTA+TGG | + | chr1.4:87711941-87711960 | MS.gene90838:intron | 30.0% | |
| GATTTAAATGTTGGGCTTTA+TGG | - | chr1.4:87711069-87711088 | None:intergenic | 30.0% | |
| GGAAGGAAACAAGAAAAAAA+AGG | - | chr1.4:87712463-87712482 | None:intergenic | 30.0% | |
| TCAACACACAAGACAAATTT+AGG | - | chr1.4:87713066-87713085 | None:intergenic | 30.0% | |
| TCTTATTCATTTGGATGCTT+GGG | + | chr1.4:87713505-87713524 | MS.gene90838:intron | 30.0% | |
| TGTGCAAGATATAGATTCTA+TGG | + | chr1.4:87711286-87711305 | MS.gene90838:intron | 30.0% | |
| TTCAAAATTCGCTATATGGA+AGG | - | chr1.4:87710412-87710431 | None:intergenic | 30.0% | |
| TTGTCCTTATGAAACAAGAA+AGG | - | chr1.4:87713267-87713286 | None:intergenic | 30.0% | |
| TTTGGTGAGATTGATATTGA+TGG | + | chr1.4:87709788-87709807 | MS.gene90838:CDS | 30.0% | |
| ! | AATATGGATTGTCGAGAAAA+TGG | + | chr1.4:87710322-87710341 | MS.gene90838:intron | 30.0% |
| ! | ATATGGATTGTCGAGAAAAT+GGG | + | chr1.4:87710323-87710342 | MS.gene90838:intron | 30.0% |
| ! | CAATCCTTTCTTGTTTCATA+AGG | + | chr1.4:87713260-87713279 | MS.gene90838:intron | 30.0% |
| ! | CATATTGTTATTGAGACTAC+TGG | + | chr1.4:87709947-87709966 | MS.gene90838:CDS | 30.0% |
| ! | GGAAAATGACAGTATTGTTT+TGG | + | chr1.4:87711011-87711030 | MS.gene90838:intron | 30.0% |
| ! | TATTGATGGTTCTTTAGTTG+CGG | + | chr1.4:87709802-87709821 | MS.gene90838:CDS | 30.0% |
| ! | TTTTTCTATAGGCTAACATG+TGG | + | chr1.4:87713609-87713628 | MS.gene90838:intron | 30.0% |
| !! | GTAGTTTTGCTATGAAGTAA+GGG | + | chr1.4:87713329-87713348 | MS.gene90838:intron | 30.0% |
| !! | GTTTGTTATGGTTGTTACTA+CGG | - | chr1.4:87709397-87709416 | None:intergenic | 30.0% |
| !! | TGTAGTTTTGCTATGAAGTA+AGG | + | chr1.4:87713328-87713347 | MS.gene90838:intron | 30.0% |
| !! | TTTAATGAAGTCAAGTTGGA+TGG | + | chr1.4:87710120-87710139 | MS.gene90838:CDS | 30.0% |
| !!! | AGTTCTTTTGATTTTGGTGT+TGG | - | chr1.4:87709330-87709349 | None:intergenic | 30.0% |
| AAAGGTCTTCTATCTGTTCA+AGG | + | chr1.4:87713677-87713696 | MS.gene90838:CDS | 35.0% | |
| AAATTTAGGTACCATGCTTG+TGG | - | chr1.4:87713052-87713071 | None:intergenic | 35.0% | |
| AACGTAGTGACGACATTTAT+AGG | + | chr1.4:87713651-87713670 | MS.gene90838:CDS | 35.0% | |
| AATGCTGAGGAATTGGAAAA+GGG | + | chr1.4:87713995-87714014 | MS.gene90838:CDS | 35.0% | |
| AATTTAAAGAGGACGGAGTA+TGG | + | chr1.4:87712383-87712402 | MS.gene90838:CDS | 35.0% | |
| AGTTTATGGCTATTACTTGC+AGG | - | chr1.4:87711498-87711517 | None:intergenic | 35.0% | |
| ATACTCCGTCCTCTTTAAAT+TGG | - | chr1.4:87712384-87712403 | None:intergenic | 35.0% | |
| ATAGATTCTATGGAACTGTC+TGG | + | chr1.4:87711296-87711315 | MS.gene90838:intron | 35.0% | |
| ATGGTCAAATTTGCCTTTCT+TGG | - | chr1.4:87709930-87709949 | None:intergenic | 35.0% | |
| ATTCCAGAAAATAAACAGCC+TGG | + | chr1.4:87712358-87712377 | MS.gene90838:intron | 35.0% | |
| CAACATAATATCTTCAGCAC+CGG | - | chr1.4:87709837-87709856 | None:intergenic | 35.0% | |
| CATGTTTAGTCATAACCTCA+TGG | + | chr1.4:87712812-87712831 | MS.gene90838:intron | 35.0% | |
| CTAAACATGACAACAAAGCA+AGG | - | chr1.4:87712801-87712820 | None:intergenic | 35.0% | |
| CTACGGAAGATTGTAGAAAT+TGG | - | chr1.4:87709380-87709399 | None:intergenic | 35.0% | |
| CTTATTCATTTGGATGCTTG+GGG | + | chr1.4:87713506-87713525 | MS.gene90838:intron | 35.0% | |
| GAATTAGTCACTTCCAAGAA+AGG | + | chr1.4:87709914-87709933 | MS.gene90838:CDS | 35.0% | |
| GACATGCACATCATATATTC+AGG | - | chr1.4:87712892-87712911 | None:intergenic | 35.0% | |
| GACGACATTTATAGGATGAA+AGG | + | chr1.4:87713659-87713678 | MS.gene90838:CDS | 35.0% | |
| GACTACACTATATTGCAGTA+TGG | + | chr1.4:87711176-87711195 | MS.gene90838:intron | 35.0% | |
| GATTGAATTGGGAAGCAAAT+AGG | - | chr1.4:87713245-87713264 | None:intergenic | 35.0% | |
| GCATAAAAGGTCTGGATTAT+CGG | - | chr1.4:87710087-87710106 | None:intergenic | 35.0% | |
| GGAGTTCATGACATATTTCA+AGG | + | chr1.4:87713902-87713921 | MS.gene90838:CDS | 35.0% | |
| GTGAACTTGGATTATGTTCT+TGG | + | chr1.4:87712410-87712429 | MS.gene90838:CDS | 35.0% | |
| TAACTTCTCGCAAATCACTT+CGG | + | chr1.4:87710496-87710515 | MS.gene90838:intron | 35.0% | |
| TCTGAATCATATTCTCACAG+CGG | + | chr1.4:87709641-87709660 | MS.gene90838:CDS | 35.0% | |
| TGACAACACTGAAACACTTA+TGG | + | chr1.4:87710694-87710713 | MS.gene90838:intron | 35.0% | |
| TGACATATTTCAAGGTTCAC+CGG | + | chr1.4:87713910-87713929 | MS.gene90838:CDS | 35.0% | |
| TTATTCATTTGGATGCTTGG+GGG | + | chr1.4:87713507-87713526 | MS.gene90838:intron | 35.0% | |
| TTGCGAATAGCAGAAAACAA+CGG | - | chr1.4:87710673-87710692 | None:intergenic | 35.0% | |
| TTGCGAGAAGTTAATCCAAA+CGG | - | chr1.4:87710489-87710508 | None:intergenic | 35.0% | |
| TTGGATTATGTTCTTGGCAT+TGG | + | chr1.4:87712416-87712435 | MS.gene90838:CDS | 35.0% | |
| TTGTACTAGATAGCATATCG+CGG | - | chr1.4:87710583-87710602 | None:intergenic | 35.0% | |
| ! | AAATGATGATGATACCTTGC+CGG | - | chr1.4:87709543-87709562 | None:intergenic | 35.0% |
| ! | AATACTTTCTTTGTGCCGTT+TGG | + | chr1.4:87710471-87710490 | MS.gene90838:intron | 35.0% |
| ! | CTATCCCGTTATGGAATTTT+GGG | - | chr1.4:87710901-87710920 | None:intergenic | 35.0% |
| ! | GAACTTGCTTCAAGCTTATT+TGG | + | chr1.4:87709260-87709279 | MS.gene90838:CDS | 35.0% |
| ! | GTCTTATTCATTTGGATGCT+TGG | + | chr1.4:87713504-87713523 | MS.gene90838:intron | 35.0% |
| ! | TAAATGTTGGGCTTTATGGT+TGG | - | chr1.4:87711065-87711084 | None:intergenic | 35.0% |
| ! | TATCCCGTTATGGAATTTTG+GGG | - | chr1.4:87710900-87710919 | None:intergenic | 35.0% |
| !! | ACTTCGGTGTTGTTAAATAG+CGG | + | chr1.4:87710512-87710531 | MS.gene90838:intron | 35.0% |
| !! | GAAAAATGTGAGTGCTACTT+TGG | - | chr1.4:87712763-87712782 | None:intergenic | 35.0% |
| !!! | CATGGCTTTTTTCTGTAACA+GGG | + | chr1.4:87713881-87713900 | MS.gene90838:intron | 35.0% |
| !!! | TCTTTTGATTTTGGTGTTGG+TGG | - | chr1.4:87709327-87709346 | None:intergenic | 35.0% |
| AACTGTGACTGACAAGAAGA+GGG | + | chr1.4:87710988-87711007 | MS.gene90838:intron | 40.0% | |
| AGCAAGTACTAACCTTCTCA+AGG | - | chr1.4:87713452-87713471 | None:intergenic | 40.0% | |
| AGGAAACTTAGACCTTGAGA+AGG | + | chr1.4:87713437-87713456 | MS.gene90838:CDS | 40.0% | |
| ATGCTGAGGAATTGGAAAAG+GGG | + | chr1.4:87713996-87714015 | MS.gene90838:CDS | 40.0% | |
| CAAAATGCTCTGCTGCTATA+TGG | + | chr1.4:87711763-87711782 | MS.gene90838:intron | 40.0% | |
| CATGTGAATCTTCATGGTGA+TGG | - | chr1.4:87713028-87713047 | None:intergenic | 40.0% | |
| CGAATCAGACATCACTTCTT+TGG | + | chr1.4:87712220-87712239 | MS.gene90838:CDS | 40.0% | |
| CGAGACACATATAACACAAG+CGG | + | chr1.4:87713793-87713812 | MS.gene90838:intron | 40.0% | |
| CTGAAGCAAAAAGTCTTCGT+TGG | + | chr1.4:87713555-87713574 | MS.gene90838:intron | 40.0% | |
| GAACTTGAATGCTGAGGAAT+TGG | + | chr1.4:87713988-87714007 | MS.gene90838:CDS | 40.0% | |
| GAATGCTGAGGAATTGGAAA+AGG | + | chr1.4:87713994-87714013 | MS.gene90838:CDS | 40.0% | |
| GCACATCATATATTCAGGCT+TGG | - | chr1.4:87712887-87712906 | None:intergenic | 40.0% | |
| GCTGCACCTCATAATTAGAT+AGG | - | chr1.4:87711118-87711137 | None:intergenic | 40.0% | |
| GTCACTACGTTCCATCAATA+AGG | - | chr1.4:87713642-87713661 | None:intergenic | 40.0% | |
| TAACTGTGACTGACAAGAAG+AGG | + | chr1.4:87710987-87711006 | MS.gene90838:intron | 40.0% | |
| TAATACAGGTTTGGCGAATC+CGG | + | chr1.4:87710059-87710078 | MS.gene90838:intron | 40.0% | |
| TATCCTCAGCATAAAAGGTC+TGG | - | chr1.4:87710095-87710114 | None:intergenic | 40.0% | |
| TATTTCAAGGTTCACCGGAA+AGG | + | chr1.4:87713915-87713934 | MS.gene90838:CDS | 40.0% | |
| TCAATTAAGCGACATGAGTC+AGG | + | chr1.4:87713767-87713786 | MS.gene90838:intron | 40.0% | |
| TCAGTTTCGCCAATAAAGCA+TGG | + | chr1.4:87713863-87713882 | MS.gene90838:intron | 40.0% | |
| TGTGGTCATGTGAATCTTCA+TGG | - | chr1.4:87713034-87713053 | None:intergenic | 40.0% | |
| ! | AAATTCCATAACGGGATAGC+AGG | + | chr1.4:87710902-87710921 | MS.gene90838:intron | 40.0% |
| ! | AATCCAGACCTTTTATGCTG+AGG | + | chr1.4:87710089-87710108 | MS.gene90838:CDS | 40.0% |
| ! | GATTATGTTCTTGGCATTGG+AGG | + | chr1.4:87712419-87712438 | MS.gene90838:CDS | 40.0% |
| ! | GCTATCCCGTTATGGAATTT+TGG | - | chr1.4:87710902-87710921 | None:intergenic | 40.0% |
| ! | TTGTCTTTGCTGTACTGTGA+GGG | + | chr1.4:87709868-87709887 | MS.gene90838:CDS | 40.0% |
| !! | CATATAGCAGCAGAGCATTT+TGG | - | chr1.4:87711765-87711784 | None:intergenic | 40.0% |
| !! | GATCATGATGATGGTGTTCA+TGG | - | chr1.4:87712998-87713017 | None:intergenic | 40.0% |
| !!! | GCATGGCTTTTTTCTGTAAC+AGG | + | chr1.4:87713880-87713899 | MS.gene90838:intron | 40.0% |
| AAAGAGGACGGAGTATGGAA+AGG | + | chr1.4:87712388-87712407 | MS.gene90838:CDS | 45.0% | |
| AAGAAGAGTGGTGAAGGGTT+TGG | - | chr1.4:87709303-87709322 | None:intergenic | 45.0% | |
| AAGCGGTGTTTGTGATTCAG+AGG | + | chr1.4:87713810-87713829 | MS.gene90838:intron | 45.0% | |
| ACAAAGCAAGGCAGTTGACA+AGG | - | chr1.4:87712789-87712808 | None:intergenic | 45.0% | |
| ACAGCCTGGCCAATTTAAAG+AGG | + | chr1.4:87712372-87712391 | MS.gene90838:CDS | 45.0% | |
| ACATCACTTCTTTGGTCCAG+CGG | + | chr1.4:87712228-87712247 | MS.gene90838:CDS | 45.0% | |
| ACTATATTGCAGTATGGCCC+CGG | + | chr1.4:87711182-87711201 | MS.gene90838:intron | 45.0% | |
| ACTGTGACTGACAAGAAGAG+GGG | + | chr1.4:87710989-87711008 | MS.gene90838:intron | 45.0% | |
| AGAAGAGTGGTGAAGGGTTT+GGG | - | chr1.4:87709302-87709321 | None:intergenic | 45.0% | |
| AGGGAAGAACTTGAATGCTG+AGG | + | chr1.4:87713982-87714001 | MS.gene90838:CDS | 45.0% | |
| ATGCATAGAAAGACCAAGCC+GGG | - | chr1.4:87711203-87711222 | None:intergenic | 45.0% | |
| ATGGTCATGGTCATGGCTAT+GGG | - | chr1.4:87712979-87712998 | None:intergenic | 45.0% | |
| ATTCGCCAACAAGATCAGTC+TGG | - | chr1.4:87712205-87712224 | None:intergenic | 45.0% | |
| CAAAGCAAGGCAGTTGACAA+GGG | - | chr1.4:87712788-87712807 | None:intergenic | 45.0% | |
| CATGATCATAGTCACGATCC+TGG | + | chr1.4:87713387-87713406 | MS.gene90838:CDS | 45.0% | |
| CCGACCCCAAAATTCCATAA+CGG | + | chr1.4:87710893-87710912 | MS.gene90838:intron | 45.0% | |
| CCTGGCCAATTTAAAGAGGA+CGG | + | chr1.4:87712376-87712395 | MS.gene90838:CDS | 45.0% | |
| CGACCCCAAAATTCCATAAC+GGG | + | chr1.4:87710894-87710913 | MS.gene90838:intron | 45.0% | |
| CTATAGGCTAACATGTGGCT+TGG | + | chr1.4:87713614-87713633 | MS.gene90838:intron | 45.0% | |
| CTTCGTTGGCATTTATGTGC+TGG | + | chr1.4:87713569-87713588 | MS.gene90838:intron | 45.0% | |
| CTTGACGAGGTTAAGCCAAA+AGG | + | chr1.4:87710183-87710202 | MS.gene90838:CDS | 45.0% | |
| GATGCATAGAAAGACCAAGC+CGG | - | chr1.4:87711204-87711223 | None:intergenic | 45.0% | |
| GATTCACATGACCACAAGCA+TGG | + | chr1.4:87713038-87713057 | MS.gene90838:CDS | 45.0% | |
| GCGGTTATCAGGTGGAATAA+CGG | - | chr1.4:87709486-87709505 | None:intergenic | 45.0% | |
| GCTATAGCGCTATTGCATAG+CGG | + | chr1.4:87710534-87710553 | MS.gene90838:intron | 45.0% | |
| GGAGCATGGAAAACGAATTG+CGG | + | chr1.4:87709662-87709681 | MS.gene90838:CDS | 45.0% | |
| GGAGTATGGAAAGGTGAACT+TGG | + | chr1.4:87712397-87712416 | MS.gene90838:CDS | 45.0% | |
| GTGGAAAGAAGAGTGGTGAA+GGG | - | chr1.4:87709308-87709327 | None:intergenic | 45.0% | |
| GTTATCAGGTGGAATAACGG+TGG | - | chr1.4:87709483-87709502 | None:intergenic | 45.0% | |
| TCAATAGCAGCAGAGCAGTT+TGG | - | chr1.4:87711158-87711177 | None:intergenic | 45.0% | |
| TTAGTTGCGGCAAAAACGTC+CGG | + | chr1.4:87709815-87709834 | MS.gene90838:CDS | 45.0% | |
| TTGCACCAGACTGATCTTGT+TGG | + | chr1.4:87712197-87712216 | MS.gene90838:intron | 45.0% | |
| TTGGGAGATAGCAGCTATAG+TGG | + | chr1.4:87710611-87710630 | MS.gene90838:intron | 45.0% | |
| TTGTTTGTCCTTGGCTCATC+TGG | - | chr1.4:87713950-87713969 | None:intergenic | 45.0% | |
| ! | GATGATGGTGTTCATGGTCA+TGG | - | chr1.4:87712992-87713011 | None:intergenic | 45.0% |
| ! | GTTGTCTTTGCTGTACTGTG+AGG | + | chr1.4:87709867-87709886 | MS.gene90838:CDS | 45.0% |
| ! | TCAGTGAGCATAGTTTGCGA+AGG | + | chr1.4:87713417-87713436 | MS.gene90838:CDS | 45.0% |
| ! | TGGCATTGGAGGCTTTGATT+TGG | + | chr1.4:87712430-87712449 | MS.gene90838:CDS | 45.0% |
| ! | TGTCTTTGCTGTACTGTGAG+GGG | + | chr1.4:87709869-87709888 | MS.gene90838:CDS | 45.0% |
| ! | TTGGTTGATGCGAAACATGC+TGG | + | chr1.4:87710153-87710172 | MS.gene90838:CDS | 45.0% |
| !! | AATCTTCATGGTGATGGTGG+TGG | - | chr1.4:87713022-87713041 | None:intergenic | 45.0% |
| !! | AGAGGCGAGTGAGTTTGTTA+TGG | - | chr1.4:87709409-87709428 | None:intergenic | 45.0% |
| !! | AGCAGAGCATTTTGGTGTAG+TGG | - | chr1.4:87711757-87711776 | None:intergenic | 45.0% |
| !! | CTGAAATATGTAGCGGGCTA+TGG | + | chr1.4:87711860-87711879 | MS.gene90838:intron | 45.0% |
| !! | GAGAGCGCTGTTAATGATGA+AGG | + | chr1.4:87712933-87712952 | MS.gene90838:CDS | 45.0% |
| !! | GTGAATCTTCATGGTGATGG+TGG | - | chr1.4:87713025-87713044 | None:intergenic | 45.0% |
| !! | GTGGCTTGGTACCTTATTGA+TGG | + | chr1.4:87713628-87713647 | MS.gene90838:CDS | 45.0% |
| !! | GTTGGATGGTGTTGTCACTT+TGG | + | chr1.4:87710134-87710153 | MS.gene90838:CDS | 45.0% |
| !! | TGGCCAGGCTGTTTATTTTC+TGG | - | chr1.4:87712364-87712383 | None:intergenic | 45.0% |
| !! | TTCTTTGGTCCAGCGGATTA+GGG | + | chr1.4:87712235-87712254 | MS.gene90838:CDS | 45.0% |
| !! | TTGGAGGCTTTGATTTGGAG+AGG | + | chr1.4:87712435-87712454 | MS.gene90838:CDS | 45.0% |
| !!! | ACCATCATCACCGGTTTTCT+CGG | + | chr1.4:87709515-87709534 | MS.gene90838:CDS | 45.0% |
| !!! | CCGTTATGGAATTTTGGGGT+CGG | - | chr1.4:87710896-87710915 | None:intergenic | 45.0% |
| AAGGTTCACCGGAAAGGTTG+TGG | + | chr1.4:87713921-87713940 | MS.gene90838:CDS | 50.0% | |
| AATAACGGTGGAGACGTCGT+CGG | - | chr1.4:87709471-87709490 | None:intergenic | 50.0% | |
| ACCGAGAAAACCGGTGATGA+TGG | - | chr1.4:87709519-87709538 | None:intergenic | 50.0% | |
| AGACACTAACCCTAATCCGC+TGG | - | chr1.4:87712247-87712266 | None:intergenic | 50.0% | |
| ATGCTCACTGATGAAACGCC+AGG | - | chr1.4:87713408-87713427 | None:intergenic | 50.0% | |
| ATTCCTGCCACCATCATCAC+CGG | + | chr1.4:87709506-87709525 | MS.gene90838:CDS | 50.0% | |
| CATATTCTCACAGCGGAGCA+TGG | + | chr1.4:87709648-87709667 | MS.gene90838:CDS | 50.0% | |
| CATGGTCATGGTCATGGCTA+TGG | - | chr1.4:87712980-87712999 | None:intergenic | 50.0% | |
| CCGTCCTCTTTAAATTGGCC+AGG | - | chr1.4:87712379-87712398 | None:intergenic | 50.0% | |
| CGAGGTTAAGCCAAAAGGTG+TGG | + | chr1.4:87710188-87710207 | MS.gene90838:CDS | 50.0% | |
| CGCCGCGACAACTATTGTTT+CGG | + | chr1.4:87711710-87711729 | MS.gene90838:intron | 50.0% | |
| CTGAACTACATAGTGCGCTG+TGG | + | chr1.4:87711245-87711264 | MS.gene90838:intron | 50.0% | |
| CTGTGACTGACAAGAAGAGG+GGG | + | chr1.4:87710990-87711009 | MS.gene90838:intron | 50.0% | |
| GAGATGAGGTGGATGATGAG+AGG | - | chr1.4:87709427-87709446 | None:intergenic | 50.0% | |
| GGCCGAAACAATAGTTGTCG+CGG | - | chr1.4:87711715-87711734 | None:intergenic | 50.0% | |
| GGTGGAAAGAAGAGTGGTGA+AGG | - | chr1.4:87709309-87709328 | None:intergenic | 50.0% | |
| GGTGTTCATGGTCATGGTCA+TGG | - | chr1.4:87712986-87713005 | None:intergenic | 50.0% | |
| TGCATAGAAAGACCAAGCCG+GGG | - | chr1.4:87711202-87711221 | None:intergenic | 50.0% | |
| ! | CTTCTTTGGTCCAGCGGATT+AGG | + | chr1.4:87712234-87712253 | MS.gene90838:CDS | 50.0% |
| ! | GCCAAAAGGTGTGGTCAATG+AGG | + | chr1.4:87710197-87710216 | MS.gene90838:CDS | 50.0% |
| ! | GCCTCATTGACCACACCTTT+TGG | - | chr1.4:87710201-87710220 | None:intergenic | 50.0% |
| ! | GGGTTTGGGTTTGCGATAAG+CGG | - | chr1.4:87709288-87709307 | None:intergenic | 50.0% |
| ! | GGTGGTGGTGATCATGATGA+TGG | - | chr1.4:87713007-87713026 | None:intergenic | 50.0% |
| ! | TCCATAACGGGATAGCAGGA+TGG | + | chr1.4:87710906-87710925 | MS.gene90838:intron | 50.0% |
| !! | AGCAGAGCAGTTTGGTGATG+CGG | - | chr1.4:87711150-87711169 | None:intergenic | 50.0% |
| !! | AGTTTGGTGATGCGGTGAGA+TGG | - | chr1.4:87711142-87711161 | None:intergenic | 50.0% |
| !! | GAGAAAACCGGTGATGATGG+TGG | - | chr1.4:87709516-87709535 | None:intergenic | 50.0% |
| !! | GGTGTTGGTGGAAAGAAGAG+TGG | - | chr1.4:87709315-87709334 | None:intergenic | 50.0% |
| !! | TGATGATGGTGGCAGGAATG+CGG | - | chr1.4:87709505-87709524 | None:intergenic | 50.0% |
| !! | TGCTGGTTTGCATCTTGACG+AGG | + | chr1.4:87710170-87710189 | MS.gene90838:CDS | 50.0% |
| !! | TTTTGGTGTAGTGGCCGCAA+CGG | - | chr1.4:87711748-87711767 | None:intergenic | 50.0% |
| !!! | ATCACCGGTTTTCTCGGTTC+CGG | + | chr1.4:87709521-87709540 | MS.gene90838:CDS | 50.0% |
| AAGGTCTGGATTATCGGCGC+CGG | - | chr1.4:87710081-87710100 | None:intergenic | 55.0% | |
| CAATAGTTGTCGCGGCGAGA+TGG | - | chr1.4:87711707-87711726 | None:intergenic | 55.0% | |
| CTTGCCGGAACCGAGAAAAC+CGG | - | chr1.4:87709528-87709547 | None:intergenic | 55.0% | |
| GCAGGAATGCGGTTATCAGG+TGG | - | chr1.4:87709494-87709513 | None:intergenic | 55.0% | |
| GCCATCCTGCTATCCCGTTA+TGG | - | chr1.4:87710910-87710929 | None:intergenic | 55.0% | |
| GGCCACTATAGCTTCCGTTG+CGG | + | chr1.4:87711731-87711750 | MS.gene90838:intron | 55.0% | |
| GTGGCAGGAATGCGGTTATC+AGG | - | chr1.4:87709497-87709516 | None:intergenic | 55.0% | |
| TCTGGCTGCCACAACCTTTC+CGG | - | chr1.4:87713932-87713951 | None:intergenic | 55.0% | |
| !! | AAACCGGTGATGATGGTGGC+AGG | - | chr1.4:87709512-87709531 | None:intergenic | 55.0% |
| ATTGCAGTATGGCCCCGGCT+TGG | + | chr1.4:87711187-87711206 | MS.gene90838:intron | 60.0% | |
| GAGTCGTCGGTGGTTTGAGG+CGG | - | chr1.4:87709449-87709468 | None:intergenic | 60.0% | |
| GGCCGCAACGGAAGCTATAG+TGG | - | chr1.4:87711736-87711755 | None:intergenic | 60.0% | |
| TCGGAGTCGTCGGTGGTTTG+AGG | - | chr1.4:87709452-87709471 | None:intergenic | 60.0% | |
| TGTGGCAGCCAGATGAGCCA+AGG | + | chr1.4:87713939-87713958 | MS.gene90838:CDS | 60.0% | |
| ! | CGGTTTTCTCGGTTCCGGCA+AGG | + | chr1.4:87709526-87709545 | MS.gene90838:CDS | 60.0% |
| ! | GGTGGTTTGAGGCGGAGATG+AGG | - | chr1.4:87709441-87709460 | None:intergenic | 60.0% |
| ! | GGTTTGAGGCGGAGATGAGG+TGG | - | chr1.4:87709438-87709457 | None:intergenic | 60.0% |
| GGAGACGTCGTCGGAGTCGT+CGG | - | chr1.4:87709462-87709481 | None:intergenic | 65.0% | |
| GACGTCGTCGGAGTCGTCGG+TGG | - | chr1.4:87709459-87709478 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87709242 | 87714039 | 87709242 | ID=MS.gene90838 |
| chr1.4 | mRNA | 87709242 | 87714039 | 87709242 | ID=MS.gene90838.t1;Parent=MS.gene90838 |
| chr1.4 | exon | 87709242 | 87709547 | 87709242 | ID=MS.gene90838.t1.exon1;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87709242 | 87709547 | 87709242 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87709633 | 87709698 | 87709633 | ID=MS.gene90838.t1.exon2;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87709633 | 87709698 | 87709633 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87709788 | 87709968 | 87709788 | ID=MS.gene90838.t1.exon3;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87709788 | 87709968 | 87709788 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87710067 | 87710263 | 87710067 | ID=MS.gene90838.t1.exon4;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87710067 | 87710263 | 87710067 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87712206 | 87712256 | 87712206 | ID=MS.gene90838.t1.exon5;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87712206 | 87712256 | 87712206 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87712365 | 87712456 | 87712365 | ID=MS.gene90838.t1.exon6;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87712365 | 87712456 | 87712365 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87712929 | 87713059 | 87712929 | ID=MS.gene90838.t1.exon7;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87712929 | 87713059 | 87712929 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87713376 | 87713458 | 87713376 | ID=MS.gene90838.t1.exon8;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87713376 | 87713458 | 87713376 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87713620 | 87713724 | 87713620 | ID=MS.gene90838.t1.exon9;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87713620 | 87713724 | 87713620 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| chr1.4 | exon | 87713902 | 87714039 | 87713902 | ID=MS.gene90838.t1.exon10;Parent=MS.gene90838.t1 |
| chr1.4 | CDS | 87713902 | 87714039 | 87713902 | ID=cds.MS.gene90838.t1;Parent=MS.gene90838.t1 |
| Gene Sequence |
| Protein sequence |
